mRNA_P-littoralis_Contig604.17.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig604.17.2
Unique NamemRNA_P-littoralis_Contig604.17.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 6.900e-160
Identity = 287/441 (65.08%), Postives = 323/441 (73.24%), Query Frame = 1
Query:   10 MLSCSIAALAFIVIWPVENTYAAVSGNVAFAPNLNLKKTVVARRPHRFSLTQLARRTRQAAASKCQSRVDNRVVEDSSISPLEA-SSSRGKFLGSLISSATALVVCTAAAGASGTKAASDGHDAPNSSDWASYSSTGGLAASGXXXXXXXXXXXXXXXXXXXXXXXXXAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFGVEPRKL 1329
            M+ C   AL  ++ WPV + Y  +  +    P++     V  ++     ++Q            C     NR V   S +PL A S+SR +FLG L++S+ AL+ CTAAA A+  KA  +  +AP  +    Y      A                            AISGLVAGAAVSTSKQLLLYPVDTVKTRLQLP+ +G+ PELFRGLYDGVLPPLLAGLPSGALFFSAKDA STAISN+SGGQYAELTT+AAVGLAQFPYWGIRTPAELLKIRSQAG+SSGSG   EGAK+ILADEG++GLYTGYSSNIAYAFPADAIKFLVYGALKRSAKK+KGG KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTA S DE YEGGV+GALGTI+ EE FSALWAG  PR+ARSVLSGAIQFGSYEFVKGLFGVEPRKL
Sbjct:    1 MVCCRRLALPSVLAWPVAHAYVQLGLHAVARPDVLTTSRVKPQQRRSLYMSQ---------GESC----SNRRVGGRSRAPLGAGSTSREQFLGGLLASSAALLACTAAANAAEQKA--EVSNAPAVAGQLEYQQPQPTAV-----------------VPESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQ-DGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: W7TEJ8_9STRA (S-adenosylmethionine mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.590e-63
Identity = 138/274 (50.36%), Postives = 175/274 (63.87%), Query Frame = 1
Query:  514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGM-SSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGT--------IANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLF 1308
            +SGL  GAA   SK+L L+P+DT KTRLQ  +   A  ELF+ LYDGV P LL G P+GA FF+ KD       N  G ++ E TT+AAV  A  PYW IR PAE+LK + Q G+  S +GG++E  K     EG++GLY GY SNIAYAFP DAIKF+VY AL++S  +     KL+ +E++VLGS AS  AQ ++TPLDVVRTR+MT  ++       V  A  T        IA EEG + L++G  PR+ R+ LSGAIQFGSYE  KG F
Sbjct:  173 LSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVK----QEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A8J5XTW0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT)

HSP 1 Score: 223 bits (568), Expect = 5.440e-62
Identity = 132/280 (47.14%), Postives = 177/280 (63.21%), Query Frame = 1
Query:  532 GAAVSTSKQLLLYPVDTVKTRLQLPRAEGA--SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACST----AISNISGGQYA-ELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIAN-------------EEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFG 1311
            GAA   +K+LLL+P+DTV+ RL+L  A  +  +P LF  LY GVLP  + G+PSGALFF+AKD        A+ +  GG Y+ E+TTV AV  AQ PYW +RTP ELLK R+Q G+++G  G+   A  ++  EGV GL+ G  SN+AYA P D +KF+ Y ++KR AK++KGG  LST+EA+  G+  S  AQA+ TPLDVVRTRV+ A  +    +G    A   +A+             E+G  AL+AG  PRV R+V SG IQFG+YE  + LFG
Sbjct:  108 GAAQRLAKELLLHPIDTVRCRLELQGARRSLLAPGLFADLYAGVLPSAVVGVPSGALFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTAGGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFG 387          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.200e-61
Identity = 127/266 (47.74%), Postives = 166/266 (62.41%), Query Frame = 1
Query:  517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKT-ILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFG 1311
            +GL+AG    T+K L+L+P DTVKTR+Q+    G    LF  LYDG+LPPL+AG P  ALFF+ KD   +A    + G  + + T+ AV LA  PYW ++TPAE +K R QA        + + A++ +   E  + LY GY SN+AYAFP D IKFL+Y  LKRSAK++ GG KLS +  A LGS ++  AQA+TTPLDV+RTR+M   +  E   G  V AL     EEG   L+AGT  RV R +L GA+QF +YE  K LFG
Sbjct:   42 TGLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGALFADLYDGILPPLVAGTPGSALFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFG 307          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE)

HSP 1 Score: 219 bits (557), Expect = 5.020e-59
Identity = 136/303 (44.88%), Postives = 187/303 (61.72%), Query Frame = 1
Query:  514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGA---SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACS-TAIS-----NISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRS---AKKSKGGT-KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDE-------------------EYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFGVEPRK 1326
            +SGL++GAA   +K+++L+P+DTVK RLQ    EGA   SP + +GLYDGV+P L+ G P+G+LFF  KD  S TA+       I G    +L+T+A V  A  PYW +R PAEL+K R Q G+++ S   ++  + ++ D+G+ GLY GY SN AYA P D +KFLVY  +KR    AK+ +G   KLST+E A+ G+ AS  AQ V+TPLDV+RTR+MT+    +                   EYEG ++     I   EG   L+AG +PR+AR+V+SGAIQF +YE VK LFG E  K
Sbjct:  222 LSGLLSGAASRIAKEVVLHPIDTVKARLQF--REGARVFSPSMLKGLYDGVVPALVVGTPAGSLFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDS---VKAFQEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTSEKKRKGRLTAEEGQGXXXXXXXXREYEG-ILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA)

HSP 1 Score: 203 bits (517), Expect = 1.430e-55
Identity = 118/264 (44.70%), Postives = 171/264 (64.77%), Query Frame = 1
Query:  514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGA--SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
            +SGL+AG A  T K++ L+P+DTVKTRLQL         P L++ +Y G+ P +++G P+ ++FF+ KD+    +    G       TVAAVG A   YW +R PAE++K+R Q+G   G   S   A  +  + G  G Y GY+SN+AYAFP D+ KF++Y A+K + ++SKGG KLS +EAAV G+ A++AAQ V+TPLDV RTR+MT  +  ++   GV+  L  +A+EEG   L+AG  P+VAR+++SGA+QF   E VK
Sbjct:   59 LSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTGG---TVAAVGCANLVYWLVRNPAEVIKVRRQSG---GESDSAAAATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPA--DQPAPGVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: R1E8V3_EMIHU (S-adenosylmethionine mitochondrial carrier protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8V3_EMIHU)

HSP 1 Score: 202 bits (515), Expect = 5.510e-55
Identity = 123/269 (45.72%), Postives = 166/269 (61.71%), Query Frame = 1
Query:  517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASP--------ELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
            SGL+AGA   T K+L L+P+DT K RLQ P A G +         ELF+  YDG+ P L++G P+ + FF+ KD    A++ +  G+ AE TTV AV  A   YWGI+ P+E+LK+R QAG++S + G+   A  I   EGV G Y+    N AY+ P D +KFL+Y  LK S    +G + LS +EAAV G+ A+  AQA+ TPLDV R R+MT+ ++      GV   L  +A EEG  ALWAG  P+VAR++ SGAIQF +YE  K
Sbjct:   79 SGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGGRRAVLGELFKSPYDGLAPALISGAPAASAFFAVKDGAKRAVAGLQLGK-AE-TTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGA---AVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDAT------GVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A7S4C3C4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3C4_CHRCT)

HSP 1 Score: 196 bits (497), Expect = 3.330e-52
Identity = 113/261 (43.30%), Postives = 164/261 (62.84%), Query Frame = 1
Query:  517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
            SGL+AGA   T+K+L+L+P+DTVKTR+Q  R            + G+ P + +G P+ ++FF+ KDA     + +     A   T+ AV  A  PYW +R P E++K R QAG+   S   LE A+ + A+EG++G YTGY SN AYA+P D+IKF++Y  LK+  + +KGG KLS +E+AV G+ ++++AQ++ TPLDV RTR MT  +         +  +  IA EEG  AL++G TP+  R+VLSGAIQF +YE  K
Sbjct:  109 SGLIAGAVQKTAKELVLHPLDTVKTRVQTSRRALTLDLFLDRPFAGLGPAITSGAPAASVFFAVKDAVKQRANALQLDTSA--ATLLAVACANVPYWLVRNPTEVIKARRQAGIVDDS---LEAARKLYAEEGLRGFYTGYVSNYAYAYPVDSIKFVLYELLKKRVRAAKGGAKLSAVESAVGGAVSAVSAQSLATPLDVARTRAMTRPAGAPPMSP--IECVRAIAAEEGLPALFSGVTPKAVRAVLSGAIQFSTYEATK 362          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A8J9T7P7_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T7P7_PHATR)

HSP 1 Score: 192 bits (488), Expect = 4.910e-52
Identity = 115/275 (41.82%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  520 GLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFR---GLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADE---------GVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVM---TASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
            G VAG  ++ +K ++ YP+DT   RLQ+P ++ +  +LFR   G Y GV  PLLA +P+GA+FF  KDAC   +  +S      + T  AV +AQ PYW +R P+E++K R QA +   + G LE  + ++ D          G++GLYTGY  NI YAFPAD IKF+ Y    R  K    G      E A+ G+ A+  AQ VTTPLDVVR R+M   T  S ++      + +L T+A +EG   L+AG++PRV +++LSGAIQF +YE  K
Sbjct:    1 GFVAGGTLTATKTVVKYPLDTATVRLQMPNSDYSFRQLFRLFDGSYRGVANPLLANIPAGAIFFGVKDACKENL-RVSTNLPRWVQTTLAVAVAQVPYWAVRNPSEVVKTRQQANIDGYNVGPLEAYQKVIQDSMTKNGNATTGLEGLYTGYWENILYAFPADVIKFVCYDQFSRGRKNLPPG------EGAMAGAAATAIAQFVTTPLDVVRNRIMAVETKFSGNDRVTPSYLDSLTTLARDEGLPGLFAGSSPRVGKAILSGAIQFATYEETK 268          
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0G4FJA6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC)

HSP 1 Score: 196 bits (499), Expect = 6.750e-52
Identity = 120/290 (41.38%), Postives = 164/290 (56.55%), Query Frame = 1
Query:  514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEG--------------------------GVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGL 1305
            ISGL  G A    K  +L+P+DT++ RLQL      +  LF  LY G++PPL+ G P+ ALFF  KD     ++        ++ T AAV  A  PYW +RTP+E++K R QAG+++ +   L+G +  +  +G+ GLYTGY++NIAYA+P D IKFLVY +LK +      G +L+ +E    GS AS  AQ  T PLDV+RTR+MT    +                               G+V     IA EEG + LW+G +PR+ R+VLSGAIQFGSYE VKGL
Sbjct:  145 ISGLAGGGASRLGKDAILHPLDTLRARLQL--RNQTNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT---LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKGL 424          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKM9_ECTSI6.900e-16065.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TEJ8_9STRA1.590e-6350.36S-adenosylmethionine mitochondrial carrier n=3 Tax... [more]
A0A8J5XTW0_DIALT5.440e-6247.14Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1TRM5_9STRA1.200e-6147.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4F9G4_9ALVE5.020e-5944.88Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0M0K8D7_9EUKA1.430e-5544.70S-adenosylmethionine mitochondrial carrier protein... [more]
R1E8V3_EMIHU5.510e-5545.72S-adenosylmethionine mitochondrial carrier protein... [more]
A0A7S4C3C4_CHRCT3.330e-5243.30Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8J9T7P7_PHATR4.910e-5241.82Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A0G4FJA6_VITBC6.750e-5241.38Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig604contigP-littoralis_Contig604:90124..95701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKM9
PFAMsMito_carr
Model size2346
Max annot lvl2759|Eukaryota
KEGG koko:K15111
KEGG TC2.A.29.18
Hectar predicted targeting categorychloroplast
Exons7
Evalue1.7e-165
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-09_000830.1
DescriptionS-adenosyl-L-methionine transmembrane transport
Cds size1323
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig604.17.2prot_P-littoralis_Contig604.17.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig604 90133..94687 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791260.068964-UTR-P-littoralis_Contig604:90123..901321680791260.068964-UTR-P-littoralis_Contig604:90123..90132Pylaiella littoralis U1_48UTRP-littoralis_Contig604 90124..90132 +
1680791260.1800003-UTR-P-littoralis_Contig604:94687..957011680791260.1800003-UTR-P-littoralis_Contig604:94687..95701Pylaiella littoralis U1_48UTRP-littoralis_Contig604 94688..95701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791260.0834463-CDS-P-littoralis_Contig604:90132..905141680791260.0834463-CDS-P-littoralis_Contig604:90132..90514Pylaiella littoralis U1_48CDSP-littoralis_Contig604 90133..90514 +
1680791260.0999568-CDS-P-littoralis_Contig604:91192..913891680791260.0999568-CDS-P-littoralis_Contig604:91192..91389Pylaiella littoralis U1_48CDSP-littoralis_Contig604 91193..91389 +
1680791260.1153283-CDS-P-littoralis_Contig604:92222..923221680791260.1153283-CDS-P-littoralis_Contig604:92222..92322Pylaiella littoralis U1_48CDSP-littoralis_Contig604 92223..92322 +
1680791260.1303556-CDS-P-littoralis_Contig604:92627..927811680791260.1303556-CDS-P-littoralis_Contig604:92627..92781Pylaiella littoralis U1_48CDSP-littoralis_Contig604 92628..92781 +
1680791260.1410801-CDS-P-littoralis_Contig604:92964..931091680791260.1410801-CDS-P-littoralis_Contig604:92964..93109Pylaiella littoralis U1_48CDSP-littoralis_Contig604 92965..93109 +
1680791260.1527119-CDS-P-littoralis_Contig604:93664..938421680791260.1527119-CDS-P-littoralis_Contig604:93664..93842Pylaiella littoralis U1_48CDSP-littoralis_Contig604 93665..93842 +
1680791260.163935-CDS-P-littoralis_Contig604:94520..946871680791260.163935-CDS-P-littoralis_Contig604:94520..94687Pylaiella littoralis U1_48CDSP-littoralis_Contig604 94521..94687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig604.17.2

>prot_P-littoralis_Contig604.17.2 ID=prot_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=441bp
MLSCSIAALAFIVIWPVENTYAAVSGNVAFAPNLNLKKTVVARRPHRFSL
TQLARRTRQAAASKCQSRVDNRVVEDSSISPLEASSSRGKFLGSLISSAT
ALVVCTAAAGASGTKAASDGHDAPNSSDWASYSSTGGLAASGREEPQQQL
LPAAAAAASESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPR
AEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYA
ELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILAD
EGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAA
VLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEG
FSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFGVEPRKL*
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mRNA from alignment at P-littoralis_Contig604:90124..95701+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig604.17.2 ID=mRNA_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5578bp|location=Sequence derived from alignment at P-littoralis_Contig604:90124..95701+ (Pylaiella littoralis U1_48)
GGCCGTGTCATGCTTTCGTGCTCGATAGCGGCGCTCGCTTTCATCGTGAT ATGGCCAGTAGAAAATACATACGCTGCAGTCTCTGGGAATGTCGCCTTTG CACCCAACCTCAATCTAAAAAAAACAGTAGTAGCCAGGCGGCCACATCGT TTTTCTCTGACACAGTTGGCGCGGCGCACTCGGCAAGCAGCTGCAAGCAA ATGCCAGTCGCGCGTCGACAACAGGGTGGTAGAGGACAGCTCGATATCAC CCCTGGAGGCCAGCTCAAGCCGGGGGAAATTCTTGGGGAGTCTTATTTCA TCCGCCACTGCATTGGTTGTGTGTACAGCAGCGGCCGGCGCGTCTGGAAC AAAGGCCGCGAGCGATGGGCATGATGCACCAAATAGTAGCGGTGAGTCAC TGCCACATTCTTCTTGCGTCGCAGAGTCCCTCATCAGTTGAAGTACCGGT ATTGAGAGCTCCGAGCATTGTTTCGCTCTGCAAGCAGAGCACCCCTTCTC CGCCCATATATAGCAGTACTCTTAGCTGTGTGTGGGGATGGGAAGTGGTT TGGAAATCGCAAGTGTAAAGGGGTACGGCGCTCCTTTCTCAACCGTAGAA ACGCGTGGGGCCGGTATATTCACTCTGTAGGATGAAACCATTCATCAATT TTTTCATATGGTAGAGCAAACGCTATATAGCTCCGGGGAACACGCTCGCA CGCCTCGAAGTCTCCGTCTGAAACCGTACTTCGCAATAGAAACGCAAATA TCCAAATATCAGAGCTGAGATACCACCCTCCCTGCATCCGATCTTCAAGG CTCTCCGCAACGAGGAGGACGCCAACATGAAACGATATCTTCGCTTTCGG AAAGCTCTCGACAGACAACCCTTCTCGATGCAGCACCGCTACTCTGTTCT GTTGTGTGGAGTAATCGAGCGTTGAAAATCGGTACAGGGGGGCCCGTGTG GTATATGTCGCTATCCATCATCCGGTATGTAGCTTTGTGGACCCTGTACT AAAAAAGTTACAATGCGCGGACACTGCGACCACCCCTTACGTGCACAAAT CATGTGGTTGGAAATAAAGATTGGGCCAGCTATTCCTCTACCGGTGGGCT GGCAGCCTCCGGTAGAGAAGAACCACAACAGCAGCTTCTACCGGCGGCGG CGGCGGCGGCGTCTGAATCGGAATCGGCAGCCTCTAGCGCCATCTCGGGT CTGGTGGCCGGAGCGGCGGTTTCAACCTCCAAGCAGCTTTTGCTCTACCC CGTCGATACGGTTAAGGTTCGTGCGTTGGCCCTCATGCCGTTGTTGTGGT GCTGAAGACTTCGAGAATCGTACGTACCTGGTAATCATACAATTTCCATT TGTTTGGTTTGAAAACGCGGTGTGGCAAGATGGGTTCCCACCTCTCAGCA GGAAGTTTTCACGTGCTCAAACATATACCTTGCTTGAGCCAGCCGCACAT GAGCGGACCGCTCGATGTATATATGTGGGTTACAGTGTGTATTAACGACT GCCCCATTGCCAGATATCTCAGGGGCAGTTTCTCGGCCTTGCTTCAGAGC CCGCAGGGATCTTGGCCTGCTTAGAATTCGGAAAATCATCGACGGGTACC TGGGAGAGCTTGCCTCCGGGTGGGCTCTGTATGTTTCTAACACAACACCC GTTTGTTCGCAATTGATCGAGTTCAGTTGCTGACTGTATGTTAACATTGG TCTCTTGACAGTTAGATGATCGCTCTTCTCAGCAGAGCGATTTGTAAGGG GATCAGGTTAGAACGCCTGCCTGTAGTCGTGCGACTCAAAATCATTACTT AAATGTAAAGGTGTGAAAAACAACATATCATTAGTGCTACCATAAACGCC TTTTTACTCTCACTGTGGTGAACTCCACAGCTTGTTAGGCGAAAGAATCG CGGATACCGATGTTGTCACCACCTTTTTTCACTGCAACGCAAGTGGATCA GTACCTTCAATAACATTTTGTGTTCGATTTCCCCTTATCACGTGTGCCCA TCGGTAGCCCCCCTTACCAGCCTGTGTTTGTTTGGTTTCGCCGTACGGCT TTGTTGCTTTGCTTCGGATCTACTGTCTTTTTTATTGTAAATGGTGCAGA CTCGGCTGCAGTTACCGCGAGCTGAAGGAGCATCTCCGGAGCTATTCCGC GGTTTGTACGACGGCGTCCTACCCCCCCTGTTGGCAGGGCTGCCCTCGGG TGAGACATCTTAGTTGCAAGGGTGGAAAGCCGGGTAGTTCCTGGACAGCC TAGCGCAGAAACGCCAACCCATGGTGAGGTACCTGTACCATAAAGTAGTA CAAGATGCACCGACCACCTGGAGGGAAATCGTGGATCGATCGTTACCATC GGAGCTATTGCTGTTGGTGTGGTTTCTCAGGTCGTCAGACGTTTGTTACT AGACTCGGCGACGTTGCTTAAAGGTAAGTTGAAATGCATGTATTTTGGTA GTTTGCTCGTTGGATGCCGATGAAGTACTTCCGTGACATGTTTATTCCCC GCAGGCGCGCTTTTTTTTTCCGCAAAGGACGCTTGTAGCACGGCTATCAG TAACATTTCGGGGGGGCAGTACGCGGAGCTGACAACAGTCGCGGCCGTGG GCCTCGCGCAGTTCCCTTACTGGGGCATCCGCACTCCGGCGGAGCTTCTC AAGATCAGGTATCTAGGACTTTGAGACGATAATTGTTACTTGGTTAAATC CCAGGTAGTATGTACTTCCGGTTAATACCCAGATCTGTGTGTGTGCGCGA TTGACAACAGCTACGTATAGCTCAAATGTTCCGTGTGTATTTCCTTTGGC AACGGTATTATCTACCGACGATCCCCATCCTCATGCCACAGGTCTCAGGC AGGAATGTCGAGCGGGAGCGGCGGCAGCCTCGAAGGCGCGAAAACCATCC TCGCCGACGAGGGCGTGAAGGGGCTGTACACGGGGTACTCCTCAAATATC GCGTACGCCTTCCCGGCCGATGCCATCAAATTCCTGGTAAGCTGGACAGG TATTTTTTCCGTCGGTGGCATCTGCCACCCCGCGTGTGCCTTATCATATA CTTCCACTACAAGTCGCACCGGCCACCGTCAATCTACACGTTGTTCAGGC ATGATGTGACCGATACACATTTTTTCCGGTTGTTGGATTTCTTATTGTGG GTTGTGCGCATTTTGCCCTTGCTTGCACCGCGCACTCCATTATACTGTGA AAAAGATGCAGTTGCGTCAAACAGATATTTGAGTCTCTGCGAGATGCACA GCGAGGGAAGCACATCGCCAATTTCTCCATGAAACGGAAGGCGGTCCCGC TGAAGGGCCACAGTATACAGTATCAACATTTCGAAGGCGGGATATAAATC GCACACATCGAAGCACGCTCATTTTCTCGATGGGATAGAATGTTCTACTG AGCGTTACGCAGCAGTGTTGGGGGGCATCTTGAACACGATGTATTTTGTA CGGTACCTCGCGAAATCTTTAGAACGTCAGTTCACTCGGCCGTACTTGTT TTACACAGCAACATTCGCTCCGCCTCCGGCGGCCATCACAGGTGTACGGA GCCCTGAAAAGATCCGCAAAGAAGTCCAAAGGTGGCACTAAACTGAGTAC CATCGAGGCTGCCGTGCTGGGATCTGGAGCGAGTCTCGCCGCGCAGGCTG TTACCACCCCGTTGGACGTGGTGCGCACGAGAGTGATGACTGCATCTTCA TCAGACGAGGAATACGAAGGTGATGCCGTGTTTACGGTGACCGGCTGCCT CTCGCGGTGTGTCCGTGTTCGTCTACACCCCCTCATCCCGCCTCTTTTGT TTTGTTCACAGCGAACTACTCTACCTCCTGAACCACTCACGATTCCGTGT GTTTTGTAGGTGCCGTTGGAGTACCCCACCGGACCGCCTCAGTTAATTCC ACCCGCGGTTCTTGTATCGTGTCGAAGACGAAGTGTCCGAAGACGTGTCC TCGACCACCACAAACCTTTTGAGATGGGTGGTGTAGTGGCAGGGCCTTGT GGTGGCGAGATGGATGGTATAGTAGTATGGGCCTTGTGACACTACGCACC ACGTTTGGTGCTGCTGGTTGCGACGTGGTGGTTGAGCAGAACGCGCCAAT CCATGCGGAGCTCCACTCCACATGCAAGGTGCCGGCGACACATAGCGGTC ACGTCTCTCAAAGGCAAACGATTACCGGTGACGTTGTCGTTCTGTCCGCC GTAACATTTATTTTGTTCGGTATGTTACGAGGAAACCGAATTATTTCCAA CGAACAAACAACACGTCACTAGGAAATGTAGGATGGCTTCATCGACAATA TTTTTCGCCGTTTTCGAACACCAACACGTAGGCACGAGTTGGTAACAGCC CCCTCCGGCGTCGCTCCAACCTACCTCTTCCCCATGCCACTAATCAGGTG GTGTCGTAGGCGCGCTTGGGACCATCGCAAACGAGGAGGGATTTTCAGCG CTTTGGGCCGGCACCACCCCTCGCGTTGCGCGATCGGTCTTGAGCGGCGC GATCCAGTTCGGGTCGTACGAGTTTGTTAAGGGGCTGTTCGGCGTGGAGC CTCGAAAGTTATAGCACAAATCGTGTGAAAGTATGTACGCCCACAAGTTG CGCATTTTGCCGCATTTTCTGCCGCTCTCACTCGCGCTTGAGTCTGTTCA TTCCGTGTTGTGTTTGCGGCGTATGATTGGCCTTGTACGTGGTGTAGGTG ATGGTTCGGGTTGCTTTTGCGCAAAGATAGCACAGTACAGCATTTTTTTT TGTGAAAAGCTTTCAGCATGAGCGTGTAGCGCTGTAGTTGCTGGTGTGCC TATCATCCTAGGTGCTCGCCGAAATGTGCGAGACAGCATGCTGAAAGAGA AGTTGAACACTATGAGTAGTGTAGTGCAGTTGCAGCTCGGTGGTCCACGG AATAAAAGAAACACAATATAGATGTCGTTACTTCTGGCTCACGCCAGGGC CAGATTTGATTAAGATGGTGATAAGTGAGCAGTGACGGGCGCAGAGCTCA TCCCTGTACCCAAAAAAAATTCCTATCTTAAAAAGCAACATTTTTGTAGG GACCTAGAAAGCAAGCAGCATTCCTGTAGAGACTGTCAAGAAACTGTTCC GTGCAACACTTTAACAGGTGGCGTGGCACAGAGTAAATTTTCGGTAGATC GAAGTCCGGGTCCTTGTAGGACATCAGCTTGATATCCCCGTACTCCGGTG GGGGGCCTCGGCGGATGATATGCCTGAAGTGCTTGTCCGTGATTTGCTAC TTCATACCCTTAAGTAGCACGCAGAGACGTGACGCCTTGTTCATCTAGTC GTCCGGATCTTATCCCAAAGACATGCTCGTGGCCGCAAGTGCCTCCTGTG TAGCGCACGAATGGTCTCGTCGGGGACCTTCAAATAATTGGACTCAAGCT CTCGCAGTACTACCTGACTGCTGTTGCCGCGGGTGCCGCGAGCGCTTTGC GCGTGTTTGGCCACGAGCTGAGCCGTCCATCTACCCCCACCTGCCGCTGC TACTGCTGTACAGTCGTGACGCAGCCATCTGGCCATCTGTACTGTCGATA CCGCATGTTCCCCCCCACCATCCCCTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig604:90124..95701+

>mRNA_P-littoralis_Contig604.17.2 ID=mRNA_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1323bp|location=Sequence derived from alignment at P-littoralis_Contig604:90124..95701+ (Pylaiella littoralis U1_48)
ATGCTTTCGTGCTCGATAGCGGCGCTCGCTTTCATCGTGATATGGCCAGT
AGAAAATACATACGCTGCAGTCTCTGGGAATGTCGCCTTTGCACCCAACC
TCAATCTAAAAAAAACAGTAGTAGCCAGGCGGCCACATCGTTTTTCTCTG
ACACAGTTGGCGCGGCGCACTCGGCAAGCAGCTGCAAGCAAATGCCAGTC
GCGCGTCGACAACAGGGTGGTAGAGGACAGCTCGATATCACCCCTGGAGG
CCAGCTCAAGCCGGGGGAAATTCTTGGGGAGTCTTATTTCATCCGCCACT
GCATTGGTTGTGTGTACAGCAGCGGCCGGCGCGTCTGGAACAAAGGCCGC
GAGCGATGGGCATGATGCACCAAATAGTAGCGATTGGGCCAGCTATTCCT
CTACCGGTGGGCTGGCAGCCTCCGGTAGAGAAGAACCACAACAGCAGCTT
CTACCGGCGGCGGCGGCGGCGGCGTCTGAATCGGAATCGGCAGCCTCTAG
CGCCATCTCGGGTCTGGTGGCCGGAGCGGCGGTTTCAACCTCCAAGCAGC
TTTTGCTCTACCCCGTCGATACGGTTAAGACTCGGCTGCAGTTACCGCGA
GCTGAAGGAGCATCTCCGGAGCTATTCCGCGGTTTGTACGACGGCGTCCT
ACCCCCCCTGTTGGCAGGGCTGCCCTCGGGCGCGCTTTTTTTTTCCGCAA
AGGACGCTTGTAGCACGGCTATCAGTAACATTTCGGGGGGGCAGTACGCG
GAGCTGACAACAGTCGCGGCCGTGGGCCTCGCGCAGTTCCCTTACTGGGG
CATCCGCACTCCGGCGGAGCTTCTCAAGATCAGGTCTCAGGCAGGAATGT
CGAGCGGGAGCGGCGGCAGCCTCGAAGGCGCGAAAACCATCCTCGCCGAC
GAGGGCGTGAAGGGGCTGTACACGGGGTACTCCTCAAATATCGCGTACGC
CTTCCCGGCCGATGCCATCAAATTCCTGGTGTACGGAGCCCTGAAAAGAT
CCGCAAAGAAGTCCAAAGGTGGCACTAAACTGAGTACCATCGAGGCTGCC
GTGCTGGGATCTGGAGCGAGTCTCGCCGCGCAGGCTGTTACCACCCCGTT
GGACGTGGTGCGCACGAGAGTGATGACTGCATCTTCATCAGACGAGGAAT
ACGAAGGTGGTGTCGTAGGCGCGCTTGGGACCATCGCAAACGAGGAGGGA
TTTTCAGCGCTTTGGGCCGGCACCACCCCTCGCGTTGCGCGATCGGTCTT
GAGCGGCGCGATCCAGTTCGGGTCGTACGAGTTTGTTAAGGGGCTGTTCG
GCGTGGAGCCTCGAAAGTTATAG
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