mRNA_P-littoralis_Contig604.17.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 6.900e-160 Identity = 287/441 (65.08%), Postives = 323/441 (73.24%), Query Frame = 1
Query: 10 MLSCSIAALAFIVIWPVENTYAAVSGNVAFAPNLNLKKTVVARRPHRFSLTQLARRTRQAAASKCQSRVDNRVVEDSSISPLEA-SSSRGKFLGSLISSATALVVCTAAAGASGTKAASDGHDAPNSSDWASYSSTGGLAASGXXXXXXXXXXXXXXXXXXXXXXXXXAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFGVEPRKL 1329
M+ C AL ++ WPV + Y + + P++ V ++ ++Q C NR V S +PL A S+SR +FLG L++S+ AL+ CTAAA A+ KA + +AP + Y A AISGLVAGAAVSTSKQLLLYPVDTVKTRLQLP+ +G+ PELFRGLYDGVLPPLLAGLPSGALFFSAKDA STAISN+SGGQYAELTT+AAVGLAQFPYWGIRTPAELLKIRSQAG+SSGSG EGAK+ILADEG++GLYTGYSSNIAYAFPADAIKFLVYGALKRSAKK+KGG KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTA S DE YEGGV+GALGTI+ EE FSALWAG PR+ARSVLSGAIQFGSYEFVKGLFGVEPRKL
Sbjct: 1 MVCCRRLALPSVLAWPVAHAYVQLGLHAVARPDVLTTSRVKPQQRRSLYMSQ---------GESC----SNRRVGGRSRAPLGAGSTSREQFLGGLLASSAALLACTAAANAAEQKA--EVSNAPAVAGQLEYQQPQPTAV-----------------VPESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQ-DGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: W7TEJ8_9STRA (S-adenosylmethionine mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.590e-63 Identity = 138/274 (50.36%), Postives = 175/274 (63.87%), Query Frame = 1
Query: 514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGM-SSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGT--------IANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLF 1308
+SGL GAA SK+L L+P+DT KTRLQ + A ELF+ LYDGV P LL G P+GA FF+ KD N G ++ E TT+AAV A PYW IR PAE+LK + Q G+ S +GG++E K EG++GLY GY SNIAYAFP DAIKF+VY AL++S + KL+ +E++VLGS AS AQ ++TPLDVVRTR+MT ++ V A T IA EEG + L++G PR+ R+ LSGAIQFGSYE KG F
Sbjct: 173 LSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVK----QEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A8J5XTW0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT) HSP 1 Score: 223 bits (568), Expect = 5.440e-62 Identity = 132/280 (47.14%), Postives = 177/280 (63.21%), Query Frame = 1
Query: 532 GAAVSTSKQLLLYPVDTVKTRLQLPRAEGA--SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACST----AISNISGGQYA-ELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIAN-------------EEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFG 1311
GAA +K+LLL+P+DTV+ RL+L A + +P LF LY GVLP + G+PSGALFF+AKD A+ + GG Y+ E+TTV AV AQ PYW +RTP ELLK R+Q G+++G G+ A ++ EGV GL+ G SN+AYA P D +KF+ Y ++KR AK++KGG LST+EA+ G+ S AQA+ TPLDVVRTRV+ A + +G A +A+ E+G AL+AG PRV R+V SG IQFG+YE + LFG
Sbjct: 108 GAAQRLAKELLLHPIDTVRCRLELQGARRSLLAPGLFADLYAGVLPSAVVGVPSGALFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTAGGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFG 387
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.200e-61 Identity = 127/266 (47.74%), Postives = 166/266 (62.41%), Query Frame = 1
Query: 517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKT-ILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFG 1311
+GL+AG T+K L+L+P DTVKTR+Q+ G LF LYDG+LPPL+AG P ALFF+ KD +A + G + + T+ AV LA PYW ++TPAE +K R QA + + A++ + E + LY GY SN+AYAFP D IKFL+Y LKRSAK++ GG KLS + A LGS ++ AQA+TTPLDV+RTR+M + E G V AL EEG L+AGT RV R +L GA+QF +YE K LFG
Sbjct: 42 TGLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGALFADLYDGILPPLVAGTPGSALFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFG 307
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE) HSP 1 Score: 219 bits (557), Expect = 5.020e-59 Identity = 136/303 (44.88%), Postives = 187/303 (61.72%), Query Frame = 1
Query: 514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGA---SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACS-TAIS-----NISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRS---AKKSKGGT-KLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDE-------------------EYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGLFGVEPRK 1326
+SGL++GAA +K+++L+P+DTVK RLQ EGA SP + +GLYDGV+P L+ G P+G+LFF KD S TA+ I G +L+T+A V A PYW +R PAEL+K R Q G+++ S ++ + ++ D+G+ GLY GY SN AYA P D +KFLVY +KR AK+ +G KLST+E A+ G+ AS AQ V+TPLDV+RTR+MT+ + EYEG ++ I EG L+AG +PR+AR+V+SGAIQF +YE VK LFG E K
Sbjct: 222 LSGLLSGAASRIAKEVVLHPIDTVKARLQF--REGARVFSPSMLKGLYDGVVPALVVGTPAGSLFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDS---VKAFQEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTSEKKRKGRLTAEEGQGXXXXXXXXREYEG-ILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA) HSP 1 Score: 203 bits (517), Expect = 1.430e-55 Identity = 118/264 (44.70%), Postives = 171/264 (64.77%), Query Frame = 1
Query: 514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGA--SPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
+SGL+AG A T K++ L+P+DTVKTRLQL P L++ +Y G+ P +++G P+ ++FF+ KD+ + G TVAAVG A YW +R PAE++K+R Q+G G S A + + G G Y GY+SN+AYAFP D+ KF++Y A+K + ++SKGG KLS +EAAV G+ A++AAQ V+TPLDV RTR+MT + ++ GV+ L +A+EEG L+AG P+VAR+++SGA+QF E VK
Sbjct: 59 LSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTGG---TVAAVGCANLVYWLVRNPAEVIKVRRQSG---GESDSAAAATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPA--DQPAPGVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: R1E8V3_EMIHU (S-adenosylmethionine mitochondrial carrier protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8V3_EMIHU) HSP 1 Score: 202 bits (515), Expect = 5.510e-55 Identity = 123/269 (45.72%), Postives = 166/269 (61.71%), Query Frame = 1
Query: 517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASP--------ELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
SGL+AGA T K+L L+P+DT K RLQ P A G + ELF+ YDG+ P L++G P+ + FF+ KD A++ + G+ AE TTV AV A YWGI+ P+E+LK+R QAG++S + G+ A I EGV G Y+ N AY+ P D +KFL+Y LK S +G + LS +EAAV G+ A+ AQA+ TPLDV R R+MT+ ++ GV L +A EEG ALWAG P+VAR++ SGAIQF +YE K
Sbjct: 79 SGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGGRRAVLGELFKSPYDGLAPALISGAPAASAFFAVKDGAKRAVAGLQLGK-AE-TTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGA---AVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTSDAT------GVAATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A7S4C3C4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3C4_CHRCT) HSP 1 Score: 196 bits (497), Expect = 3.330e-52 Identity = 113/261 (43.30%), Postives = 164/261 (62.84%), Query Frame = 1
Query: 517 SGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
SGL+AGA T+K+L+L+P+DTVKTR+Q R + G+ P + +G P+ ++FF+ KDA + + A T+ AV A PYW +R P E++K R QAG+ S LE A+ + A+EG++G YTGY SN AYA+P D+IKF++Y LK+ + +KGG KLS +E+AV G+ ++++AQ++ TPLDV RTR MT + + + IA EEG AL++G TP+ R+VLSGAIQF +YE K
Sbjct: 109 SGLIAGAVQKTAKELVLHPLDTVKTRVQTSRRALTLDLFLDRPFAGLGPAITSGAPAASVFFAVKDAVKQRANALQLDTSA--ATLLAVACANVPYWLVRNPTEVIKARRQAGIVDDS---LEAARKLYAEEGLRGFYTGYVSNYAYAYPVDSIKFVLYELLKKRVRAAKGGAKLSAVESAVGGAVSAVSAQSLATPLDVARTRAMTRPAGAPPMSP--IECVRAIAAEEGLPALFSGVTPKAVRAVLSGAIQFSTYEATK 362
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A8J9T7P7_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T7P7_PHATR) HSP 1 Score: 192 bits (488), Expect = 4.910e-52 Identity = 115/275 (41.82%), Postives = 162/275 (58.91%), Query Frame = 1
Query: 520 GLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFR---GLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADE---------GVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVM---TASSSDEEYEGGVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVK 1299
G VAG ++ +K ++ YP+DT RLQ+P ++ + +LFR G Y GV PLLA +P+GA+FF KDAC + +S + T AV +AQ PYW +R P+E++K R QA + + G LE + ++ D G++GLYTGY NI YAFPAD IKF+ Y R K G E A+ G+ A+ AQ VTTPLDVVR R+M T S ++ + +L T+A +EG L+AG++PRV +++LSGAIQF +YE K
Sbjct: 1 GFVAGGTLTATKTVVKYPLDTATVRLQMPNSDYSFRQLFRLFDGSYRGVANPLLANIPAGAIFFGVKDACKENL-RVSTNLPRWVQTTLAVAVAQVPYWAVRNPSEVVKTRQQANIDGYNVGPLEAYQKVIQDSMTKNGNATTGLEGLYTGYWENILYAFPADVIKFVCYDQFSRGRKNLPPG------EGAMAGAAATAIAQFVTTPLDVVRNRIMAVETKFSGNDRVTPSYLDSLTTLARDEGLPGLFAGSSPRVGKAILSGAIQFATYEETK 268
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Match: A0A0G4FJA6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC) HSP 1 Score: 196 bits (499), Expect = 6.750e-52 Identity = 120/290 (41.38%), Postives = 164/290 (56.55%), Query Frame = 1
Query: 514 ISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPRAEGASPELFRGLYDGVLPPLLAGLPSGALFFSAKDACSTAISNISGGQYAELTTVAAVGLAQFPYWGIRTPAELLKIRSQAGMSSGSGGSLEGAKTILADEGVKGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKSKGGTKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTASSSDEEYEG--------------------------GVVGALGTIANEEGFSALWAGTTPRVARSVLSGAIQFGSYEFVKGL 1305
ISGL G A K +L+P+DT++ RLQL + LF LY G++PPL+ G P+ ALFF KD ++ ++ T AAV A PYW +RTP+E++K R QAG+++ + L+G + + +G+ GLYTGY++NIAYA+P D IKFLVY +LK + G +L+ +E GS AS AQ T PLDV+RTR+MT + G+V IA EEG + LW+G +PR+ R+VLSGAIQFGSYE VKGL
Sbjct: 145 ISGLAGGGASRLGKDAILHPLDTLRARLQL--RNQTNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT---LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKGL 424 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig604.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig604.17.2 >prot_P-littoralis_Contig604.17.2 ID=prot_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=441bp MLSCSIAALAFIVIWPVENTYAAVSGNVAFAPNLNLKKTVVARRPHRFSLback to top mRNA from alignment at P-littoralis_Contig604:90124..95701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig604.17.2 ID=mRNA_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5578bp|location=Sequence derived from alignment at P-littoralis_Contig604:90124..95701+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig604:90124..95701+ >mRNA_P-littoralis_Contig604.17.2 ID=mRNA_P-littoralis_Contig604.17.2|Name=mRNA_P-littoralis_Contig604.17.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1323bp|location=Sequence derived from alignment at P-littoralis_Contig604:90124..95701+ (Pylaiella littoralis U1_48)back to top |