mRNA_P-littoralis_Contig603.7.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig603.7.4
Unique NamemRNA_P-littoralis_Contig603.7.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: D7FVE3_ECTSI (MRH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE3_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 3.670e-147
Identity = 257/499 (51.50%), Postives = 335/499 (67.13%), Query Frame = 3 
Query:   54 QRKMP--------GYGTLMLLLAVSS--AHETA-LLGLDLVEDRTADMIESIFADMSINFMEEALLQSAVPVGXXXXXXXXXXXXXXXXXXTVVVFPSYSLTDIDGVVHTCTVREEPEQAKSSRKGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDIVQFH--QDGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFK--KTKGGSGSGR-KSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDREAVNGQH--PLATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSK-GISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDISTVKGDGKHLIRSREQGADEEGGTIVLEFTGGTECDLTGMRRSSTVHLKCGPEQMVRNVVEDRTCHYRVLAYSPHLC 1493
            QR MP        G  +++ LLAV +  A+ET  ++GLDLV+DR+ +++ES+ ADMSINFME AL Q+ +  G                   V  FPSY+ TD+DGV+HTCTVRE  EQA+S  K     K D+STALDPL+G+CATLS+G +WSY+WCHR+D+ QFH  +DG +TT ++ LG H +TE+KR N   T A+  SAD+ D    + VSR     K+KGG+  GR +S +D  F GIND SE+AAV+D+YE GD C+E G RR +KT ITCC+ +  +  G+   PLA  VS+QEVS+CSY+ +VCS+LLCPA +D +T G   +  VS G  V   VG    GVLG+LQ LEACFP KK+ WW+YKLC+S  G SQ+H+++   A+ + ++KIT  LG   G       KWD STV G+G+ LIR +++  + EGGTI+LEFTGGTECDLTG+ RS+TVHLKCG  Q VR V EDRTCHYRVLA SP LC
Sbjct:    3 QRSMPVQPSFGIVGVMSVISLLAVPTGLAYETRPMVGLDLVQDRSVEVMESMRADMSINFMEAALAQATLASGTGDGDDKRSSSEASRGESAV--FPSYTFTDVDGVLHTCTVRERMEQAESPGK-----KSDVSTALDPLEGSCATLSHG-YWSYKWCHRKDVTQFHKSEDG-ATTTVVNLGTHTRTELKRVNVTPTKADGASADSSDSPHEAEVSRALNNNKSKGGNDGGRHESQNDDLFQGINDVSELAAVYDYYEGGDVCEETGARRFLKTTITCCTANDVSAGGESADPLAILVSLQEVSICSYLVQVCSRLLCPAATDGLTLGLGQEAVVSSGVVVTGKVG----GVLGLLQELEACFPPKKETWWAYKLCISTTGFSQYHEDLLRKADGSLMSKITVGLGRITG-------KWDKSTVTGEGEELIRPQQE-EEGEGGTIILEFTGGTECDLTGVLRSTTVHLKCGSVQEVREVTEDRTCHYRVLAISPLLC 480
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A7S2DT72_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DT72_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.100e-31
Identity = 107/400 (26.75%), Postives = 163/400 (40.75%), Query Frame = 3 
Query:  384 SSRKGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDIVQFHQDGESTTA--LIRLGRHA-KTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDREAVNGQHP-----LATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDISTVKGDG----KHLIRSREQGADEEG-GTIVLEFTGGTECDLTGMRRSSTVHLKCGPEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVEC 1544
            S+  G    +  + T ++ L G C TL  G +WSY WCHR+ + QFH D    T   +  LG++   T V     NAT    DS                                              + D++  G  C E G  R  K  + CC+     V  +       +A+F SI+E  +CSY   +C+ +LC              G V  G    TA        L  L+ L+     + + WWSY+ C  +   QFH  V++   K + + +          DE+SLGK   + +   G    K+++        EEG  T+  E+T GT C+LT   R S++ + CG    + +VVED TCHY+V+  +  LC H A +    + ++V C
Sbjct:   10 SAALGGNATQDPVDTLMNALVGQCDTLRTG-WWSYEWCHRKYVRQFHIDDAQGTLDPVWSLGQYNHSTRV-----NATIERSDS----------------------------------------------MVDYFVGGQHCHETGEGRQSKVDLRCCTEAEHKVKSKKDRKSSAIASFASIREPGLCSYEVTICTPMLC--------------GAVQGGGKNHTA--------LDFLEALQGTCFSRHEGWWSYEFCYKRHFRQFH-LVTVIDAKGKTSSVIQ--------DEYSLGKAQEADINSSGADEAKYMVPKISADGSEEGVSTMEFEYTDGTTCELTQAPRGSSIQMICGAGDAILSVVEDYTCHYKVIISTTALCKHEAFVKKTPSTKSVSC 326
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: W7TPI2_9STRA (Mannose-6-phosphate receptor binding domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPI2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.170e-27
Identity = 104/393 (26.46%), Postives = 154/393 (39.19%), Query Frame = 3 
Query:  441 LKGACATLSNGQFWSYRWCHRQDIVQFHQDG-----ESTTALIR-----LGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDR----------EAVNGQHPLATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDISTVKGDGKHLIRSREQGADEEGGT---IVLEFTGGTECDLTGMRRSSTVHLKCG--PEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVEC 1544
            L   CA L N  +WSY WCHR+++ QFH +      E +   +R     LG++AKTEV       TP   D                                              AV D++  G  C E G  R       CC+             +     + +A  +S++E++ C Y   VCS LLC A          G    S+               L +L+ + +    + D +WSY+ C +  I QFH      A    V+K+ S   Y IG  +       +     +  H+I ++E    EEGG      +++TGGT CDLTG  R++TV   CG  P  +  ++ EDR+CHY+ +  +P LC H +    K     V C
Sbjct:  147 LDNTCAIL-NKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEV------LTPEGGDRG------------------------------------------AMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQ--------------ALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESE--YIIGTSQ------PVPEGFKEEDHIILNKE----EEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A7S2D807_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D807_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.370e-25
Identity = 73/222 (32.88%), Postives = 104/222 (46.85%), Query Frame = 3 
Query:  882 LATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDIST-VKGDGKHLIRSREQGADEEGGTIVLEFTGGTECDLTGMRRSSTVHLKCGPEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVEC 1544
            LA+F SI+E SVC+Y   VC+ LLC   S NV+                            +L+ L      + + WWSY+ C  K + QFH  V++   K +V             DE+ LGK D+    KG     I     G ++E   + LE+  GT C+LT  +R+STV   CG    + +VVED TCHY+V+  +P LC H A +    A R++ C
Sbjct:   23 LASFASIREPSVCTYEVVVCTPLLCGGKSQNVS-------------------------AFSLLESLNGVCLSRHEGWWSYEFCYKKQMRQFH-LVTVTDAKGKVASQVQ--------DEYLLGKADVEAEFKGGESRYIT--HPGINDEPAALELEYQDGTVCELTKQQRASTVQFLCGTTDTIVSVVEDHTCHYKVVITTPTLCKHPAFVRESPATRSMAC 208
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A7S2WMT7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMT7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.300e-18
Identity = 106/425 (24.94%), Postives = 160/425 (37.65%), Query Frame = 3 
Query:  318 SLTDIDGVVHTCTV------REEPEQAKSSR-KGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDIVQFHQDGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDREAVNGQH---------PLATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDISTVKGDGKHLIRSREQGADEEGGTIVLEFTGGTECDLTGMRRSSTVHLKCGPEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVEC 1544
            ++T+ +G   TC V       EE E A S   +GP  +       L+ L+  C T++ G +W+Y WCHR+ I QFH D            H +  V                       +W    + +T                   N  S   ++ D +E G  CDE G  R+ +    CCS D  A  G+           LA   SI+E  VCSY   +C+ L+C   S+NVT         S  E +  +   R +G        E C+  +      + L    G    H   S    + +         Y +G  + +  K        + + L     +       T+ LE   GT C+LTG  R++TV   CG    +++V E  TCHY+V+  +  LC H + +      RTV C
Sbjct:   62 AVTNHEGTRFTCEVPGSGGAEEESEVADSEPPRGPEAL-------LEALEDYCDTMAMG-WWTYEWCHRKHIRQFHVD------------HVQGHVD---------------------PNWSLGNYVRTVT----------------TNSTSGHVSLADHFEGGQHCDETGGGRNTRVEFQCCSHDASAQQGKKRRTRKNRSDSLALLTSIEEPDVCSYEVVICTPLVCGQGSENVT-------AFSLLEPLRRSCLVRHEG----WWTYEFCYGRQIR---QFHLIADGGN---HPGASGGGSEVQTE-------YILGKADKAATKAAQDGTLDETQFLKPPSPEADIYAPHTLELEMGDGTLCELTGRPRATTVEFACGQTDAIQSVNEVHTCHYKVVISTQKLCKHPSFVQGSPPTRTVTC 405
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: F0Y7D0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7D0_AURAN)

HSP 1 Score: 98.6 bits (244), Expect = 2.380e-18
Identity = 81/300 (27.00%), Postives = 118/300 (39.33%), Query Frame = 3 
Query:  318 SLTDIDGVVHTCTVREEPEQAKSSRKGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDIVQFHQDGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDR--EAVNGQHPLAT-----FVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFH----DNVSMAAEK 1184
            ++ D DG    C  R     A+    GP      LS AL  L G+CA L+ G +W+Y WCHR+ + QFH + ++ +    LG + +TE++  +  A       A +VD  G+  +SR                                VFD    G  CDE G  RS      CC   +  +A  G+   A        S+ EV++CSY   VCS  LC   S N T                            +L+ LE     + + WWS++ C  KG  QFH    D+ ++  E+
Sbjct:   42 NMRDADGKAFVC--RSGSPAAREPEPGPKT----LSEALGQLDGSCAYLNQG-WWTYEWCHRRHVRQFHLEAQARSPEWSLGDYTRTELEDDDGGA-------ASSVDAAGSEALSRAVD-----------------------------VFDV--GGQRCDETGTGRSSTVHFRCCDGPKPGKATKGKRKRAAGAEAFITSVDEVALCSYAFAVCSPSLCSPSSPNATASL-------------------------LLKALEGVCLQRHEGWWSFEFCYKKGARQFHARAEDDAALVVER 271
[Close]
BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A7S3UD06_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UD06_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 9.180e-12
Identity = 90/409 (22.00%), Postives = 151/409 (36.92%), Query Frame = 3 
Query:  432 LDPLKGACATLSNGQFWSYRWCHRQDIVQFHQDGESTTAL-IRLGRHAKTEVKRANDNATPANFDSADAV-------------DETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDRE----AVNGQHPLATFVSIQEVSVCSYVARVCSQLLCPALSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVWWSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKW---DISTVKGDGKHLIRSREQGADEEGGTIVLEFTGGTECDLTGMRRSSTVHLKCGPEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVECVAEGTNARGKP*RERAR 1595
            L  L+  C    NG +W++  C    + QFH   +S  +    LG    T ++ A  N T       DA+             D+   + + R+ ++     G   +S  D       D     +    Y  G  C E    R       C +  ++    A N    L     I+E S C Y+  V + L CP+ +       EG   + +     T         L IL++++         WW+Y+ CL     QFH + +                     +E  LG++   + S +  +   L++  +     E   ++L +TGG+ C +TG  R++T+ + CG    + ++ E  TC Y     SP LC+H A  P       + C  E T+       ER +
Sbjct:  204 LQSLRSICFYKPNG-YWTFEVCPGNRVRQFHLVTKSKKSPDFSLGTFHHTLLREAKSNGTTEEI-RTDALLYFLMIEGIHIPDDDMDYNSLLRIVQRE----GLLEESALD-----TMDQIPAESQQQLYIGGQLCHETYSHRKTIVEYRCGTAQQKGTNVANNAVSKLGMISKIKETSTCQYIITVSTPLACPSTTV------EGSDKMEQNTKEPTP-----GSALDILKKVKPQCYTHHGGWWTYETCLFGKFKQFHQDKNKNL-----------------IEENLLGQYTPPEPSLLAEEEPGLVQDLDN---PERSYLLLNYTGGSMCSITGKERTATLKVTCGDTLFITDIQETSTCTYTATVQSPALCNHPAFWPKIEEPLKLHCWKEPTHGLSSALLERQK 570
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A8J2S6J8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6J8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.870e-10
Identity = 57/207 (27.54%), Postives = 79/207 (38.16%), Query Frame = 3 
Query:  336 GVVHTCTVREEPEQAKSSRKGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDIVQFHQDGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDREAVNGQHPLATFVSIQEVSVCSYVARVCSQLLC 956
            G  + C+  E    ++ ++K P      L+T L  L G CA LS G +W+Y WCHR+ + QFH  G        LG +++T VK  N     A  D A A D                                         VFD  ++G  C E    R       CC  D+   +  +     VS+ E S+C+Y   VCS  LC
Sbjct:   45 GARYECSAGEARLASQVAQKTPDKKPETLTTLLSALDGQCAKLSQG-WWTYEWCHRRHVRQFHAQGSKIDPDWSLGGYSRTVVK-GNLGPQDAPADPALARD-----------------------------------------VFD--QKGQICHETNTLRQTNVTFKCCEPDKRRRHRTY----LVSVDETSLCNYEVVVCSPSLC 202
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BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Match: A0A812J271_9DINO (OS9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812J271_9DINO)

HSP 1 Score: 59.7 bits (143), Expect = 7.280e-6
Identity = 48/178 (26.97%), Postives = 65/178 (36.52%), Query Frame = 3 
Query:  432 LDPLKGACATLSNGQFWSYRWCHRQDIVQFHQ-DGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWVSRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGVRRSVKTAITCCSTDREAVNGQHPLATFVSIQEVSVCSYVARVCSQLLCPA 962
            L  L+  C  L  G +W+YR+C++Q + Q H  +G        LG++  TE   A  +  P  F                                                V  FYE G  CDE    RS +  + CC         Q+    F SIQE S+C+YVA+VC   LC A
Sbjct:   89 LVSLRQTCFDLPTG-WWTYRYCYKQHVRQIHVGEGSQVETDWSLGQYKSTEHNAALRSRDPLYF------------------------------------------------VSQFYEGGQPCDENNKHRSTEVRLQCCPG-----KSQNKAPAFDSIQEPSLCTYVAKVCVPALCKA 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig603.7.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FVE3_ECTSI3.670e-14751.50MRH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2DT72_9STRA1.100e-3126.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TPI2_9STRA3.170e-2726.46Mannose-6-phosphate receptor binding domain protei... [more]
A0A7S2D807_9STRA1.370e-2532.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WMT7_9STRA2.300e-1824.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7D0_AURAN2.380e-1827.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3UD06_9CHLO9.180e-1222.00Hypothetical protein (Fragment) n=1 Tax=Picocystis... [more]
A0A8J2S6J8_9STRA5.870e-1027.54Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812J271_9DINO7.280e-626.97OS9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig603contigP-littoralis_Contig603:34507..41400 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVE3
PFAMsPRKCSH
Model size2696
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons11
Evalue2.45e-152
EggNOG OGs2EW69@1|root,2SY1U@2759|Eukaryota
Ec32 ortholog descriptionGlucosidase II beta subunit-like
Ec32 orthologEc-14_000790.1
DescriptionGlucosidase II beta subunit-like protein
Cds size1518
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig603.7.4prot_P-littoralis_Contig603.7.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig603 34569..40284 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791257.3255546-UTR-P-littoralis_Contig603:34506..345681680791257.3255546-UTR-P-littoralis_Contig603:34506..34568Pylaiella littoralis U1_48UTRP-littoralis_Contig603 34507..34568 +
1680791257.457097-UTR-P-littoralis_Contig603:40284..414001680791257.457097-UTR-P-littoralis_Contig603:40284..41400Pylaiella littoralis U1_48UTRP-littoralis_Contig603 40285..41400 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791257.336519-CDS-P-littoralis_Contig603:34568..346941680791257.336519-CDS-P-littoralis_Contig603:34568..34694Pylaiella littoralis U1_48CDSP-littoralis_Contig603 34569..34694 +
1680791257.353362-CDS-P-littoralis_Contig603:35200..353681680791257.353362-CDS-P-littoralis_Contig603:35200..35368Pylaiella littoralis U1_48CDSP-littoralis_Contig603 35201..35368 +
1680791257.3629365-CDS-P-littoralis_Contig603:35972..361341680791257.3629365-CDS-P-littoralis_Contig603:35972..36134Pylaiella littoralis U1_48CDSP-littoralis_Contig603 35973..36134 +
1680791257.3726363-CDS-P-littoralis_Contig603:36266..363991680791257.3726363-CDS-P-littoralis_Contig603:36266..36399Pylaiella littoralis U1_48CDSP-littoralis_Contig603 36267..36399 +
1680791257.381521-CDS-P-littoralis_Contig603:37313..374441680791257.381521-CDS-P-littoralis_Contig603:37313..37444Pylaiella littoralis U1_48CDSP-littoralis_Contig603 37314..37444 +
1680791257.390237-CDS-P-littoralis_Contig603:37593..377161680791257.390237-CDS-P-littoralis_Contig603:37593..37716Pylaiella littoralis U1_48CDSP-littoralis_Contig603 37594..37716 +
1680791257.3991828-CDS-P-littoralis_Contig603:37913..381071680791257.3991828-CDS-P-littoralis_Contig603:37913..38107Pylaiella littoralis U1_48CDSP-littoralis_Contig603 37914..38107 +
1680791257.4112465-CDS-P-littoralis_Contig603:38584..387171680791257.4112465-CDS-P-littoralis_Contig603:38584..38717Pylaiella littoralis U1_48CDSP-littoralis_Contig603 38585..38717 +
1680791257.4226112-CDS-P-littoralis_Contig603:39128..392421680791257.4226112-CDS-P-littoralis_Contig603:39128..39242Pylaiella littoralis U1_48CDSP-littoralis_Contig603 39129..39242 +
1680791257.4320843-CDS-P-littoralis_Contig603:39535..396841680791257.4320843-CDS-P-littoralis_Contig603:39535..39684Pylaiella littoralis U1_48CDSP-littoralis_Contig603 39536..39684 +
1680791257.4451313-CDS-P-littoralis_Contig603:40199..402841680791257.4451313-CDS-P-littoralis_Contig603:40199..40284Pylaiella littoralis U1_48CDSP-littoralis_Contig603 40200..40284 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig603.7.4

>prot_P-littoralis_Contig603.7.4 ID=prot_P-littoralis_Contig603.7.4|Name=mRNA_P-littoralis_Contig603.7.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=506bp
MPGYGTLMLLLAVSSAHETALLGLDLVEDRTADMIESIFADMSINFMEEA
LLQSAVPVGGGGGDGDHSSGGGATKDDTVVVFPSYSLTDIDGVVHTCTVR
EEPEQAKSSRKGPTNVKVDLSTALDPLKGACATLSNGQFWSYRWCHRQDI
VQFHQDGESTTALIRLGRHAKTEVKRANDNATPANFDSADAVDETGASWV
SRVFKKTKGGSGSGRKSNSDGAFHGINDFSEVAAVFDFYEEGDFCDEIGV
RRSVKTAITCCSTDREAVNGQHPLATFVSIQEVSVCSYVARVCSQLLCPA
LSDNVTYGREGKGGVSKGEAVMTAVGQRADGVLGILQRLEACFPVKKDVW
WSYKLCLSKGISQFHDNVSMAAEKARVTKITSSLGYTIGADEFSLGKWDI
STVKGDGKHLIRSREQGADEEGGTIVLEFTGGTECDLTGMRRSSTVHLKC
GPEQMVRNVVEDRTCHYRVLAYSPHLCSHAALMPPKAAIRTVECVAEGTN
ARGKP*
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mRNA from alignment at P-littoralis_Contig603:34507..41400+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig603.7.4 ID=mRNA_P-littoralis_Contig603.7.4|Name=mRNA_P-littoralis_Contig603.7.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6894bp|location=Sequence derived from alignment at P-littoralis_Contig603:34507..41400+ (Pylaiella littoralis U1_48)
TCGAGGCTTTGTACCCACTGTGGAGCTAAGGCTCACGCGGTTCATCCACG
CCTCAGCGAAAGATGCCGGGCTACGGTACTCTGATGTTACTGTTGGCCGT
AAGTTCGGCTCACGAGACAGCACTGCTTGGCCTCGACCTTGTTGAGGACC
GCACCGCAGATATGATCGAGAGCATCTTTGCTGATATGGTGAGATGCTGA
CAGCAGTACTGAACATTTCGATTTTTACGTCACAAATGTTCGTTGTCTGC
TGTAAAAAGGGCGTTCATTGATACGTTCATTATGCCAAGTCAACGAGTTG
TTTATTGTTTGCCAACACTTCCCTTTGATTCCTCTAATAGTCTCCTGTTC
TTATCTACTGCTTGTACTTCGAAGTATAATGCCCTTGTAGACCAACAGGG
AGCTGACAACAGCAGTGGTATGATAGCATTCGCACGCCAACTGCCGTAGG
TCATCGCACATGCTAGCGCCGGCAGTGTTGCTCCGGCAATACACGGGACT
CACATTATTTCGGTGGGCCAAGTGAAGCTGACACGCTAGCGTTCGGCCTA
CGAACACATCTTACATATCTCACCATAACGCTCAAAACAACAATGCCCGT
GTACAGCAGCAGTGCCAACCGTCATGCATCGTGTGATATGGCATGCGGTA
TGTACATCACGCGTTCACTTCGACTGCTGTCGACATGCCAACAGAGCATC
AATTTCATGGAAGAAGCCCTTCTACAATCAGCGGTACCAGTGGGTGGTGG
GGGCGGTGATGGCGATCACAGCTCGGGGGGTGGGGCGACGAAGGACGACA
CGGTCGTGGTGTTTCCCTCGTACTCCCTTACGGACATCGATGGCGTCGTA
CACACGTGCACGGTGAGAGCAAAACTACGAAGTACTACGCATCATACGGG
AGATTACATCCCGAGTATACCATAGGCACCACCCCCACAACCTGTCATGT
CATATCATGATCGTGTCACATGCAATCCCAACCCCCGGTTGAGAGTTTTG
CTATGCGCTCAAAATGCAACTGGGGAAAACTGCAACGTCGTCAGATTAAG
CTCAGTGTTCGGGATGACACAACACCCACACGAGATACCACAACTTTAGT
AATGGTGTGCTTCGAAGTGCATACAAGTACTGCGTGAGGCGTGACGAATT
CCCGGGGCTTGGATGGGATCCTGGATGTGGGGCTATCGGTCTGTAACCAG
TCATTGCCGCCTTCAATTGAGATTGGCGCATACACTCAACCAGAGATCTC
AGGTACGACGGCAACCAGTACATGCGAGCAGCGTGCTTTCATGTTGAACG
GCGCCCGCCCTCAGTCGTCCCGGTATCGCGTTTGAAGGCGTTCAAACGCG
AGGCGCGAGCTGTGCACCGGGGGATGGCTACTGTAGGCTACCGTATCCGT
TGATTCTGCCCGCCGTGGCCGACATGCTATTTTTGTGTTCTTGTCATCGT
GCGTCTTATGATACAGGTGCGCGAAGAGCCAGAGCAAGCGAAATCCTCGA
GAAAGGGACCCACCAATGTCAAAGTCGACCTTTCGACAGCGCTCGACCCG
CTGAAGGGTGCATGCGCCACGTTGTCGAACGGCCAATTTTGGAGCTACCG
GTGGTGCCATCGGCAAGACATTGTCCAGGTATGGTGATGCTTGGTGCTCG
CCTGTACAGTCGAGAGACACTCGTAGTCATGGTGTGTCTAGCGTGCCCGC
GTTTGTTTCTGGGAGAATCTCAAACCATGCCATGCTGTTTTATTCTGTCA
CGACGAACAGTTCCACCAAGACGGAGAGTCAACGACGGCACTGATCCGTC
TCGGACGTCACGCCAAGACGGAGGTGAAGCGGGCCAACGACAACGCCACC
CCGGCCAATTTCGATTCCGCTGATGCAGTCGACGAGACAGGAGGTGCGTA
GCTTCTTTCGAGGGATACTCTTGCTTCCAAATATGATAGTTGGCTCATTT
TTGCTCGCCAAAAGAAAAACTATGGTCAGTCGGACGTACGTAGTGACGCC
ATGATAGCAGGAGGAGGAGGGGGAGGGAGACGGTGGGGCTACATATTTTG
TGCTCTATGCGCAAGCGTACAGATGGTGCCTGATGGTTGTCCGTGACAAA
CAGAGATTGTTCGAGGAACTGCTTCGTGTCCTAGTAGAACGGTCTACCCC
GTCATGCTGAAGCTCGGAGCTACCAGGAAAAGTAGGGCAAAATGTAGCAA
AACTTTAGCCTAGGAATTGACTACCGTAGGGGGGCTCCGTGTTTATTTTC
TCTCCAATCACGGAGGACCCACGAAGCCTGAAAGATCGTCGGCCAACCGT
TGGACTGGGGCAGGCGCTGTGAAAGACACAACGAAAGAGCTGAATGACAG
GCTTGCGTAGGTGATGGACGGAGAAATTTGAGTTCAAGACGAGCAGCAAC
CATATGCTCGATGTGGTTTTCGGGTTTCAAGCTGTATACATCGTTGAATT
GCGAGGACGCCCAGTTATAAATTGCGATTGGACAAAACAATTCCGCTCAA
GGGGTATGAGTTTGGCGTCGTTTTATGATGGCGGTGCGGGATTAGACCTG
GTGTGCTTCTATGTTGAGCATCTCCCTGGCGCTCATCAAATCTAGATTGG
GTTGTGGTCATTGCTGTTGTTCCCTCAAGTTTAGTCAGGCATTACCCATG
AATATTATTCGTTGTTGCACGATGAAGTAGTTACCCGCGTCCTTGTTTAC
ATAGAAGACTTTGCTGTTTTTCTCTCTCCTTCATCGATATTCGTTTGCTG
TGCCGCCGCGTTGAATCCACTTGTGACTTTTGCTTTTCGTCTGGTGGCGA
ATTTCAGCGTCCTGGGTGTCCCGCGTTTTCAAGAAGACCAAGGGTGGCAG
CGGCAGCGGGCGCAAGTCTAACAGCGATGGTGCTTTCCATGGAATAAACG
ACTTTTCAGAGGTGGCCGCTGTATTCGACTTCTACGAGGTGCGCTACAAG
CGGTACGGAAGTTTGGAACGTATCGCCGAAGGGGATTTCGTTCCGATCGC
GTTCGTGAACTGTCAGGTCCCTGTTGACTGCTGTATTGTCTCGCTGTCGG
GCGTCGGATTTCCCCTTGCGATGTCGTGGTGGCGCAGGAGGGAGACTTCT
GCGATGAAATTGGAGTAAGGCGGTCCGTAAAGACGGCCATCACCTGCTGC
TCGACGGACAGAGAAGCAGTGAACGGTCAGCATCCCTTGGCGACGTTCGT
GTCGATACAGGTAAGACGAAGGAGCCGAACGAATCGCGGCATTGCTTTTG
TCTGGCGATGCCATTTGACCGCCGTGGCGATGGCGCGGCAGGTGAAGTGC
GACAAAGACTGCCTTGACGCCTGTGTTACCCTGGCCGACCACACTCAGCA
GCCCCTGATGCATCCCTAATCCCTACCCAACCCCCCCTCCCCCCTCCAAC
ACCACAGGAGGTGTCAGTGTGTTCCTATGTTGCCCGGGTCTGCTCCCAAC
TCTTGTGCCCAGCGCTCTCAGACAACGTGACCTATGGCCGTGAGGGAAAA
GGAGGAGTTTCGAAGGGGGAGGCCGTGATGACTGCTGTTGGCCAAAGGGC
CGATGGTGTTCTAGGCATTCTGCAGAGGCTAGAGGCTTGCTTCCCCGTAA
AGTGAGAAGTACGAGAAAATGCAATTCGTCACCTGTATCCTATATCGTGT
TCTTCCGGAGAGTTTGCATGGGCAGACAATCGCTCCTGCGAAAAGCTCGG
TATCTTTCTTACGACATATTGTGAGTTCATTTGACGTGAACACGGCAGGG
TGCGGCTCTCGTGGAAAATTATGTGCCGTGCATAGAGCGCATCGCATTTT
CAAAAGTCAAACGTGACGTTTTCTTTCGTTTTTCGCCTTCGTACGGACAA
ACCGGCCTGCGCTAGGCCTGGTTGTGCTTGCGTTAACGTCGGCGTGTGTG
CGTGTTTCCATTACTACTGCATCTGAAGGCTTTCCACATAGGCGTTGTCT
CGAGCAGCTGAGGCATCGTGCCGCGAAAATCACCCTCACGACCTCTTTTG
CGGGGGGGTACCACCCACCTGACCGACCCCGTGCTTCTTGTTGTGCCTGC
ACGTGCCCTCTGATTCCTGACCCATAAGGAAAGACGTGTGGTGGTCTTAC
AAGCTGTGTCTCTCGAAAGGGATCAGCCAGTTCCACGACAATGTGAGCAT
GGCGGCAGAAAAAGCACGGGTGACCAAAATCACGTCGAGTTTGGGCTACA
CAATTGGCGCTGTGGCGGGGTACATGACAAGAGAAAAAAAGAACATGCCG
TCTGGGTTGTTCTATCGTATCGGCTTGATGGTTGCTGACGTATGCTCTGA
CCGACACTTCTCTGGCGTTCTGGTCTTGGGTAGGGTTGTCGTGGCATATC
AAATGACGACGTAGACTACGCAGCTACAGGTATTTGTTAGAGTCCCGCGC
CGCCTAACGACTTTCAAAGCGACACAGAGGGCATGCATGCCCTTGAGCAT
ACTTTTACTTTTGCGCAACATAATACAGGCGAGAGTTTCACACATGGATC
TCTGAGATGCGCGCATTGCTACTTTATATTTGTGTACATATACCTCCGCG
CATCAAAAGTAGTATATGCCGCGATACGCCACTTTCAAGATCTCTGCTTG
TGGTTGTGTTTTGGCCCCGCAGGATGAATTCTCTCTCGGCAAGTGGGACA
TATCCACCGTGAAGGGCGACGGCAAACACCTCATCCGTTCACGTGAACAG
GGGGCGGACGAGGAGGGAGGCACCATCGTTCTAGAGGTGTGATACTTGCA
GTTTTCAGAGGTTGCGTCGGCGCCATGTCTTTGTCATGTAGGCGAAACGG
CCATTACCCCGTTCGCTTACTACACTTATAAATTTAGGCATGCGGCCTTG
TGGCTGTTGGCCGTGTTCAAGCGCAAGCGAAACACAGGTTCGTCTTGTCG
TGAGAATGATATTTTCCAACCCCACCGGGTGCCTCTGTAGTGTTCTCGAG
AGGTACGTTACGTAGATATTGACTCGCACCCGTCCCGTTTCCTCTCCCTT
GTCGCCTTTACACTACTTCACGGATTTAGTTTACCGGAGGCACCGAGTGC
GACCTCACTGGAATGCGTCGATCGAGCACGGTACACCTCAAGTGCGGCCC
TGAACAGATGGTCAGAAATGTTGTCGAGGATCGCACCTGCCACTACCGAG
TCCTCGCCTACTCGCCGCACCTGTGCAGGTACGCACTCTGCCCCGGTGGC
TGACCGTCACGCAAAAGGTATTCTTGCAGCGCGTTGTAGTGCTGAAACTT
GCTCTCACCCATCATTGTGACAACCAACAGACCTAGGTGTGAAAAAGTTC
ACGGTTCCGATCGAAAGTGAAACTGATCCGAACTTCAGAGTACTGAACAA
GGGGGGCAACAGGGAAGCCTCGACTCCGAAGGAAGGTCGGATTATCGAAG
TGTGACGTCAAGAGAGGCACTAGGTTTACTCATATGGTCGAGGCTTGAGC
TGATTCGGCCGATCTGTGTATGTATGTGAAACCTGCTGTTTACGCTGGTC
TATCAGACTAAGACGCCTGGTTTGAATGTTTAGCATGAATTACCCCCCCC
CCCGACTCCTAGTGGGGTAGCTTGTTCAAACGCTGTGCGCGAATCGAAGC
CCCCTCCGCCCCCCCCGCCTGCTCCTGATGTTTCGTGATTTCTTCATGAT
CGTTCACCGGCCCTGGCCCATAATATGGGTTTCACTGCTGTAGCCACGCG
GCACTGATGCCGCCAAAAGCGGCTATCCGCACAGTCGAATGCGTCGCCGA
AGGAACAAATGCCCGCGGAAAGCCATAGAGGGAACGGGCGCGCGGAGCTT
AGGACGGTGTCTATACCTACCTTTAGTAATAGAGGGCGAAAAGTATGAGT
ATTTTGTGACCGCCGTACTGCTGTATCGTACGTGTGTCTTTCTTGTTCGA
CAATCTGTGTTTTGTTTCGCCGGCAAATCTATAAAAGTGTACTCGCTGCC
TTCGTTGATCAGTGTGAAGCACACAAGCCAGTTGTTTGACAGCATGGTAA
AGGCAGGGGGGGGAATAATACATGGCACGTTGGAGCAGCCGTGACGCGTG
CTGCACATATGATACCGGTGCAACGTGGCGGTTCAATGTTCCTTGATGCT
TTTTAGTGATAATTGCAAAAGTGAGAGCGGTTTGTTTGATGTCTCTGCTT
GCCTGAACGTGTGACGTACAGTTTGTCCTGCACCTAGCATGATAGGCCCG
TCCAGGTTACGGTGGGCCATGTGTGTGAAGATTGCGAAACGAAGCAGGTG
GTGAGAGATCGACAACGTTCAGGTGGGATTACGGCGATTGTGTAGCCTAT
TTATCGCGTATCCATCTACTTTTTCTAAAACAGTCAAGAGCGCTGTGCTT
CGTTCGCGAATTATGTGGTTCTTGCCTCCTCCCCCCCCTGTTGTAACATG
TGCATAGCTTTGCTGAGGTTCCGTGTAATATTACGTTTGGGTATTTTCGC
TGATGGTCTTTCCGCGGTGATACAGCAGTAGTGCACGGGCGTGTGGGTAT
GCATCGTTGTATGGTATGATATTCGAGTCATGATGAGCTTGTACGAGCGA
GTCACAATTTTGATTAGTGTTTCGTTTTTCGTGTCCTTGAGTTACAAGTA
TCGAGCACCCTGTTGTGAGCTCGTGTGTTTTTGTGCACTTGTCGGTGAGT
TGTTTGACAACAGAGGTGGTCGCTGCACTCCCCAGCCATACCGGGGACCA
GCATCCCGATAAACTTTAGGAGCAGCATCGGGATCAACCTTCGGAGCCAG
GGAACACGAAAAGCAATTACATTTATCCACGGCAGTGCCACCCAGATGTT
ACTGACATCGTTAGCCCGCCATACGTCTTGCCTGCGTGTTGTGCGAACGT
GGCGATATGATGTGCAGCGCCAATCGGCCACTTCGTTCTGCCGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig603:34507..41400+

>mRNA_P-littoralis_Contig603.7.4 ID=mRNA_P-littoralis_Contig603.7.4|Name=mRNA_P-littoralis_Contig603.7.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1518bp|location=Sequence derived from alignment at P-littoralis_Contig603:34507..41400+ (Pylaiella littoralis U1_48)
ATGCCGGGCTACGGTACTCTGATGTTACTGTTGGCCGTAAGTTCGGCTCA
CGAGACAGCACTGCTTGGCCTCGACCTTGTTGAGGACCGCACCGCAGATA
TGATCGAGAGCATCTTTGCTGATATGAGCATCAATTTCATGGAAGAAGCC
CTTCTACAATCAGCGGTACCAGTGGGTGGTGGGGGCGGTGATGGCGATCA
CAGCTCGGGGGGTGGGGCGACGAAGGACGACACGGTCGTGGTGTTTCCCT
CGTACTCCCTTACGGACATCGATGGCGTCGTACACACGTGCACGGTGCGC
GAAGAGCCAGAGCAAGCGAAATCCTCGAGAAAGGGACCCACCAATGTCAA
AGTCGACCTTTCGACAGCGCTCGACCCGCTGAAGGGTGCATGCGCCACGT
TGTCGAACGGCCAATTTTGGAGCTACCGGTGGTGCCATCGGCAAGACATT
GTCCAGTTCCACCAAGACGGAGAGTCAACGACGGCACTGATCCGTCTCGG
ACGTCACGCCAAGACGGAGGTGAAGCGGGCCAACGACAACGCCACCCCGG
CCAATTTCGATTCCGCTGATGCAGTCGACGAGACAGGAGCGTCCTGGGTG
TCCCGCGTTTTCAAGAAGACCAAGGGTGGCAGCGGCAGCGGGCGCAAGTC
TAACAGCGATGGTGCTTTCCATGGAATAAACGACTTTTCAGAGGTGGCCG
CTGTATTCGACTTCTACGAGGAGGGAGACTTCTGCGATGAAATTGGAGTA
AGGCGGTCCGTAAAGACGGCCATCACCTGCTGCTCGACGGACAGAGAAGC
AGTGAACGGTCAGCATCCCTTGGCGACGTTCGTGTCGATACAGGAGGTGT
CAGTGTGTTCCTATGTTGCCCGGGTCTGCTCCCAACTCTTGTGCCCAGCG
CTCTCAGACAACGTGACCTATGGCCGTGAGGGAAAAGGAGGAGTTTCGAA
GGGGGAGGCCGTGATGACTGCTGTTGGCCAAAGGGCCGATGGTGTTCTAG
GCATTCTGCAGAGGCTAGAGGCTTGCTTCCCCGTAAAGAAAGACGTGTGG
TGGTCTTACAAGCTGTGTCTCTCGAAAGGGATCAGCCAGTTCCACGACAA
TGTGAGCATGGCGGCAGAAAAAGCACGGGTGACCAAAATCACGTCGAGTT
TGGGCTACACAATTGGCGCTGATGAATTCTCTCTCGGCAAGTGGGACATA
TCCACCGTGAAGGGCGACGGCAAACACCTCATCCGTTCACGTGAACAGGG
GGCGGACGAGGAGGGAGGCACCATCGTTCTAGAGTTTACCGGAGGCACCG
AGTGCGACCTCACTGGAATGCGTCGATCGAGCACGGTACACCTCAAGTGC
GGCCCTGAACAGATGGTCAGAAATGTTGTCGAGGATCGCACCTGCCACTA
CCGAGTCCTCGCCTACTCGCCGCACCTGTGCAGCCACGCGGCACTGATGC
CGCCAAAAGCGGCTATCCGCACAGTCGAATGCGTCGCCGAAGGAACAAAT
GCCCGCGGAAAGCCATAG
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