mRNA_P-littoralis_Contig60.81.20 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI) HSP 1 Score: 1637 bits (4239), Expect = 0.000e+0 Identity = 887/1165 (76.14%), Postives = 920/1165 (78.97%), Query Frame = 2
Query: 104 SKGNTSSKRQGTSRPTSKTIXXXXXXXXXXXXGPSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQVGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGSGPAAVARLKFCNAKPGA-GLGGAGA-TKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQS 3592
S G T+ ++ G S PT+ GPSFTL SIPGKTTA+KRR LG+GGPLLKLWVEGVTVGYPGKKNEEA ++KLTPRECRERGLTYHGALLVDLCYQVGDGD +RTQ+RAGDCPVMVGSRRCHL GHGPA+L+RGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCAR DQSTLTVTLHYISTGGATLRFSVRKQEFLVP VIILKALRDTSDREIHER+LQG K NTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVL APATATD+ELGKKV+DR + C + RCR + P L + V L VRQ IGRD R++ AKA MQVRD K+MAK +RFGSAVGQGMSTFLSTGNV STSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGG APPPAESP SLES+L+RLGV+PAGTGAGDGA SLP SFLPVLVDGRVVGGGSEATLK XXXXXXXXXXXXXXXX VDPTLEV W+PPM GGAGPYPGL LNSEGARMCRPVLHL SGR EWIGPM QQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYK VLFPQAAIVQTRRHGEYQ+DDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKG+GPAAVARLKFCN KPG+ G GGA A TKLHEGLGWDGLPMVGSWV+PGDALYCVVDELTGKVTVGK TIGMLIESMAGKSGAMHGTYQDATPFAFHE+DRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVC+ CGSLLSTSARRGAVATAGQS
Sbjct: 14 STGGTAQRQAGKSHPTT---------------GPSFTLKSIPGKTTADKRR-------------------------------LGEGGPLLKLWVEGVTVGYPGKKNEEATNAKLTPRECRERGLTYHGALLVDLCYQVGDGDVVRTQKRAGDCPVMVGSRRCHLRGHGPARLTRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARKDQSTLTVTLHYISTGGATLRFSVRKQEFLVPVVIILKALRDTSDREIHERVLQGQKDNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLQAPATATDIELGKKVIDRV---------ETGWCWPW-----------RCRWNWPRCC----------LRALFVS------LPAVRQLIGRDARMDQAKAVMQVRDAKHMAKYLDRFGSAVGQGMSTFLSTGNVISTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGKAPPPAESPLSLESLLVRLGVAPAGTGAGDGALSLPSSFLPVLVDGRVVGGGSEATLKRAXXXXXXXXXXXXXXXXXXXXXXXXXX--------VDPTLEVGWVPPMKGGAGPYPGLFLNSEGARMCRPVLHLQSGRMEWIGPMAQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYK--VLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGAGPAAVARLKFCNVKPGSVGAGGAAAATKLHEGLGWDGLPMVGSWVQPGDALYCVVDELTGKVTVGK-------------------------------------------------------------------------------------TIGMLIESMAGKSGAMHGTYQDATPFAFHEEDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCSACGSLLSTSARRGAVATAGQS 1001
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA) HSP 1 Score: 1408 bits (3645), Expect = 0.000e+0 Identity = 720/1228 (58.63%), Postives = 885/1228 (72.07%), Query Frame = 2
Query: 200 GPSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQVGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRC--------------------ARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGSGPAAVARLKFCNAKPGAGLGGAGATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
GPS+ ++++P TAEK ++LV H+ S+N FL++GL AV D+P +++G+ GPL++LW E V +GYPG+ +E +KL PRECRER LTY + V++ YQ+ + R QRR G+CP+MV S+RCHL G GP ++ +EE E+GGYFIV G+ERVIRLLQVP+RN+A AI R FK+RGQ YS+ GV MRC R D ST TVTLHY++TGGATLR+SVR+ EFLVP ++++KALR+ SDRE++ER+L GD NT LAA +EVLL D R GLH+R + LAFLGS FR V + +D+ LG ++++R VLVHL+RH DKQE LL+ML+K PGHLF M +KE++ L KVR + + R++ AKA + +DPK + K +R+G GQ M++FLSTGN+T+++GLDLMQ SGFT+VAERIN LRYL+HFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDG+PCGLLNH+A C++ L+ LG++PAG G+GDG+ +LP+ ++PV+VDGRVVGGG+ TL+ VS LRRLKV V+PT+EVA +PPM G+GP+PGL L + +RM RPVL++ + EWIGP+EQ FMEIACLA + + TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCL PH+TDNKMY+ +LFPQA +V TRRH E+QMD+YPQGTNAVVAVISYTGFDMEDAMILNKS+FERGF HASV+KT +DL+D+ K V +++F N G GG KL+E L DGLP +G+ VK GD LYC +D T K GKHKESE A VETVRA+G G+++ +++AS+TLRFPRNP+IGDKFSSRHGQKGVMSILWP DMPFTESG++PDIIINPHAFPSRMTIGMLIESMAGK+GA+HG +QDATPF+FHE +RVIDHFGEQL+SAGYAY+GSEPLYSG++GTVMHADIFIGLVYYQRLRHMVSDKSQVRA+G VN LTRQPIKGRKNKGG+R GEMERD+LLSHGAAFLLHDRLMNCSDRH+AHVC TCGS+LS +R AV +AG+S ++ +VAMPYVFRYLANELAGMGIKLTL +
Sbjct: 36 GPSYDISNLPSAATAEKMQSLVDAHVNSFNQFLDEGLNDAVLDLPDVELRVGEDGPLMRLWYESVELGYPGRSRDETSGAKLVPRECRERNLTYGAPIHVNIAYQLEGSEAQRVQRRLGECPIMVRSKRCHLAGLGPKEMVALKEEDTEIGGYFIVGGLERVIRLLQVPRRNHAQAIRRSAFKNRGQVYSDLGVSMRCDHSPLQLXXXXXXXXXXXXXGRRDHSTATVTLHYLTTGGATLRWSVRRAEFLVPVMVVIKALREISDRELYERVLAGDTANTQLAARLEVLLLDAARVGLHTREQCLAFLGSRFRAVGNRTDVHSDLALGIEIINRHVLVHLKRHEDKQETLLHMLKK------------------------PGHLFTMYMKEKLFDVLVKVRSELLKQSRIDVAKALLAAQDPKTIIKLVDRYGIGTGQRMASFLSTGNITTSTGLDLMQASGFTVVAERINMLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHMAAECQI--------------------LVSLGMTPAGIGSGDGSTALPYYYMPVMVDGRVVGGGTHETLQAVSRGLRRLKVATPPA--------------------VEPTMEVALLPPMKKGSGPFPGLFLFTGASRMIRPVLNIEFCKREWIGPLEQPFMEIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYR--ILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLLTKSDSKTMVGKMRFTNTAAD-GKGG----KLYENLDNDGLPRIGACVKEGDPLYCAIDLRTNKTKTGKHKESEMAYVETVRAVGGAGINKEAMAKASMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQSDMPFTESGMTPDIIINPHAFPSRMTIGMLIESMAGKAGALHGHFQDATPFSFHEKNRVIDHFGEQLKSAGYAYYGSEPLYSGISGTVMHADIFIGLVYYQRLRHMVSDKSQVRASGAVNPLTRQPIKGRKNKGGIRFGEMERDSLLSHGAAFLLHDRLMNCSDRHLAHVCCTCGSMLSPCHQRSAVTSAGRSEEEVIQASR------------------------CRYICRALKTCQDKGQIESVAMPYVFRYLANELAGMGIKLTLTV 1168
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA) HSP 1 Score: 1332 bits (3448), Expect = 0.000e+0 Identity = 710/1217 (58.34%), Postives = 849/1217 (69.76%), Query Frame = 2
Query: 200 GPSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQL---GDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQVGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLR-DVAGKGSGPAAVARLKFCNAKPGAGLG-----GAGATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSG--LSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTL 3817
GPSFT +P + + +VAPH+ES+N+FL+ GL AV + P ++L G+ GPLLK WVE +G+P + + TPRECRERGL Y + Q G +R QR G+ P+MV S RC L G +L +EEA E GGYFIV GIER+IRLLQ+P+RN+A AISR TFK RG GYS+KGV MRC RPDQS++TVTLHY++ G AT R ++ KQEFLVP V++LKALRD +D E++ER+ GD+ NT+L VE+LLR+ + SR ++L++LGS FRTVL +D + G+ +VDRFV +HL H+DKQECLL+MLRKLYAFVQGRCR D PD+ N ELLLPGHL+ + VKE++E L Q + ++ R + A+A +D Y A+ R G+ VG+ + LSTGN+ S +G+D+MQVSG+TIVAER+NF R+L+HF+SVHRGQFFTTMKTTAVRKLLPES+GFLCPVHTPDGSPCGLLNH+ATA +V+C +L+ LGVSP G G+ DGA L LPVL+DGRVVGG + V LRR K V G+G VD TLEVA++ P+ GG P PGL L S ARM RPVLHL +G E+IGPMEQ FME+A L +DVR G TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTP PHRTDNK+Y+ +L PQA IVQTRRH EY MD++PQGTNAVVAVISYTG+DMEDAMIL+K+S++RG A V KT +V LR D+ G P L+F N + A + G L E L DGLP+VG+WVK GD LY VD LTG+V VGKHKESE ACVE VR LG EG + L SITLRFPR P+IGDKFSSRHGQKGV+SILWP EDMPFTESG+SPDIIINPHAFPSRMTIGMLIESMAGKSG++HG YQDATPF+FHED R ID+FGEQLR+AGYAY GSEPLYSG++GT+MHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRK GG+R GEMERD+LLSHG ++LLHDRLMNCSDRH+AHVC CGSL+ + + V +A Q+ + K TVA+PYVFRYL NELA M IKL L
Sbjct: 48 GPSFTRGPLPPAAAVCRYKEVVAPHVESFNYFLDTGLREAVSCLFPVELRLSKDGESGPLLKSWVEECEIGFP---TGDGSTGLYTPRECRERGLMYAAPIRAVFRIQREGGGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGYFIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQSSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDAQRLRGKGR-VDATLEVAFIHPVRGG--PAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSY-PHRTDNKLYR--ILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRDMRGGPKRP----DLRFSNLRTPAVVAKRQFPGRVGDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPFSFHEDRRAIDYFGEQLRAAGYAYFGSEPLYSGLSGTLMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHLAHVCQECGSLVGPTMTKSTVLSAAQAGTMTAVAA-------------------------VASSQAKVICRACGGKARTVALPYVFRYLTNELAAMNIKLRL 1226
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA) HSP 1 Score: 1261 bits (3262), Expect = 0.000e+0 Identity = 680/1291 (52.67%), Postives = 860/1291 (66.62%), Query Frame = 2
Query: 134 GTSRPTSKTIXXXXXXXXXXXXGPSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGP----------LLKLWVEGVTVGYPGKKN---EEAVSSKLTPRECRERGLTYHGALLVDLCYQVG------DGDPI-------RTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCAR--PDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDT-------SDREIHERLLQGDKKNTFLAAHVEVLLRDGKRW-GLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMST----FLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTG--AGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAG------KGSGPAAVARLKFCN-----AKPGAGLGGAGATK--LHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSR---ASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHE--DDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKID 3826
G + +SKT PSF P + ++ RTL PH+ S+++FLE GL+ +KDI P + L D +K+WVE V V P + + +LTPRECRE GL Y G + ++C+Q+ DG R ++ GD P+MV S+ CHL G P +L + +EE E GGYFIV GIER +RLLQ+P+RN+ AI R +K RG Y++ GV +RCAR DQ+++T T+HY++TGGA+L+F+ RKQEFL+P ++IL+AL T SD E++ R+LQGD++NTFL A E+LL+D +R+ GL + E + F+GS FR + ++TD ++G ++ +F+L+H+ + DK ECLL ++RKLY+F G C D D+L N E+L+PGHL VKE+ E +R + +++R + +K ++D +K +R+G+ G G+ FLSTGN+ S+SGLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A K + PAP ++ SL+ +LI+LG SP+G G +GDG + +P+ +DGRV+GG S K ++A+LR++KV V PTLEVA +P G GPYPGL L + AR+ RPVLH SG+ E IGPMEQ FM+IACLA+DVR G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L PHRTDNK+Y+ PQAAI QT RHG+Y+MD+YP GTNAVVAV+SYTGFDMEDAMILNKS++ERGFGHASV KT VD++D A KG P R+KF N AK + GG G T L+ LG DGLP VG+WV GD +YCVVDELTG+ GKHKE E+AC++ VR LG + ++R SITLR PRNPVIGDKFSSRHGQKGV+SILWP DMPF+ESG+SPD+IINPHAFPSRMTIGMLIESMAGKSGAMHG +QDATPF+FHE D +D+FGEQL+SAGY+Y+GSEPLYSGV+G +MHAD++IG+VYYQRLRHMVSDK Q RATG VN LTRQPIKGRK GG+RLGEMERD+LLSHG AFLLHDRL+NCSD+HVA+ C CG LLS + + +V TAGQSA V + +PYVFRYLANELAGM IK+T+ I+
Sbjct: 2 GAAAESSKTPKKSREKVVIKETCPSFRRGHAPSFSDVKRLRTLSLPHVGSFDYFLERGLSEGIKDIEPFEIDLVDPKKSGSKKNKEVQTIKMWVENVRVDRPVSASGGSHSKLGGRLTPRECRELGLMYSGPMHGEICFQINHRQINDDGSISEIENSIQRIPKKFGDMPIMVMSKACHLHGKNPEQLIQMKEEQNEFGGYFIVNGIERCVRLLQIPRRNHPTAIQRSNYKSRGPTYTDLGVAIRCARHNEDQTSITNTVHYLTTGGASLKFTARKQEFLIPIILILRALSGTKYGLGGVSDEELYNRILQGDEENTFLKARAELLLQDSQRFQGLSTPNECVEFIGSRFRMLSMKADSSTDEDIGHYIIKKFILIHIPEYGDKLECLLLLIRKLYSFAAGDCGVDNADSLQNQEILMPGHLVCSFVKEKFEEMFMAIRIGMLKEMRQDFSKILGNIQDTSTFSKIVDRYGNLAGGGIGKKVQHFLSTGNIISSSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFLEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMAL--KSIPMTYPAPLSGDNLQSLDDLLIKLGASPSGAGGISGDGRGPSIHTHVPICLDGRVIGGASAKRCKSIAAQLRQMKVEDNAT--------------------VPPTLEVALIPKGVKG-GPYPGLFLFTGAARLVRPVLHRASGKEEMIGPMEQPFMDIACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQN--PQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKP----RMKFGNKTVRRAKDPSAAGGIGTTDEVLYPNLGEDGLPEVGTWVDEGDPIYCVVDELTGRTRPGKHKEKEKACIQQVRLLGQPSASKDKVNRDDIVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKSGAMHGMFQDATPFSFHESGDKIAVDYFGEQLQSAGYSYYGSEPLYSGVSGCLMHADLYIGVVYYQRLRHMVSDKYQARATGQVNALTRQPIKGRKKGGGIRLGEMERDSLLSHGTAFLLHDRLLNCSDKHVAYACRRCGDLLSPTTEKSSVLTAGQSALQAMSGARLRVFCRNPMCRDKSEREGANDEM-----------------VEPIVLPYVFRYLANELAGMNIKMTMDIN 1245
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA) HSP 1 Score: 1249 bits (3232), Expect = 0.000e+0 Identity = 681/1295 (52.59%), Postives = 839/1295 (64.79%), Query Frame = 2
Query: 203 PSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGP---------------LLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQV----GDGDPI-----RTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARP--DQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRD-------------TSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWG-LHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFG------SAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTGA--GDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVA------GKGSGPAAVARLKFCNA--KPGAGLGGA----------------GATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRA--------------SITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHE--DDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
PSF +P + AE+ R + APH+ES+++FL GL AAV D+ P + + D ++ WVE + P K +++LTPRECRE +TY G + D CYQ DG + R +R GD P+M SR CHL G P KL R +EE E GGYFIV GIER +R+LQ+P+RN+ AI RG++K RG Y++ GV +R AR D S++T T+HY++TGGA+LRF RKQEFL+P V++L+AL +D E++ R+++GD NTFL A E+LL+D +R+ L E LA+LG+ FR + + +DV++G+ ++DRFVL+HL HSDK E LL +LRKLY+F G C D D+ N E+LLPGHL VKE+ E L+ VR + +++R++ A+A V+D ++ ++ +R+ S++G+ + FLSTGN+ S++GLDLMQVSG+TI+AER+NFLRY AHFRSVHRGQFF M+TTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA C+V+ PA L+ +LI +GV+P GTG GDG + LPV +DGRVVGG K ++ LR LKV V PTLEVA +P PYPGL L + AR+ RPVLH +GRTE IGPMEQ FM+IACL +DVR G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L P+R DNK+Y+ PQA +VQT RHG + MD+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT VDLRD A G G + ARLKF N KP A LH L DGLPM G WV GDALYCVVD LTGK VG+HKE E+ACV+ VR LG +S S++ S+TLRFPRNPVIGDKFSSRHGQKGVMSILWP DMPF+ESG+SPD+IINPHAFPSRMTIGMLIESMAGK+GA+HG YQDATPF+FHE D +D+FGEQL++AGY+Y+GSEPLYSGV+G +M AD+++G+VYYQRLRHMVSDK QVRATG VN +TRQPIKGRK GGVRLGEMERD+LLSHGAAFLL DRL+NCSDRHVA C CG LL + R +V +AGQSA V +A+PYVFRYLANELAGM IK+TL I
Sbjct: 39 PSFARGHLPSEEQAERYRAISAPHVESFDYFLTTGLRAAVSDVVPNELDVVDPREKREMGAASAVKEDVDCVRFWVENARISLPSKIAISGGAARLTPRECREMAMTYAGGMTADFCYQFIDRRADGSEVEGKVSRCNKRFGDMPIMTMSRACHLRGKSPEKLVRMKEEHNEFGGYFIVNGIERCVRILQIPRRNHPTAIQRGSYKKRGPTYTDLGVAVRSARHCGDCSSITNTVHYLTTGGASLRFPARKQEFLIPVVLLLRALSGXXXXXXXXXXXXXVTDEELYRRIVRGDSTNTFLRARAELLLQDARRFSDLADPSECLAYLGARFRMLSGRADSTSDVDVGRYMIDRFVLIHLPNHSDKLEYLLLLLRKLYSFAAGECGVDNADSFQNQEILLPGHLICHYVKEKFEESLQSVRLGLLKEMRVDFARAYSSVKDSRWWSRMVDRYAGIGGNASSIGKKVQHFLSTGNIVSSTGLDLMQVSGYTIIAERLNFLRYCAHFRSVHRGQFFMEMRTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCEVMSY--PAETMGGKLQDLDELLIGMGVTPCGTGGAGGDGRGTPDRGHLPVCLDGRVVGGAPARLCKSIAIHLRELKVAEPEPI-------------------VPPTLEVAHIPSTGSDGEPYPGLYLFTGSARVVRPVLHRRTGRTERIGPMEQPFMDIACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQN--PQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNILKKPEXXXXXXXXXXXXXXXXXKVEKNAAPWLHRTLDEDGLPMPGEWVSEGDALYCVVDTLTGKDNVGRHKEKEKACVQCVRKLGSASAGQSMNSKSGGRGSSSAVPDEKISLTLRFPRNPVIGDKFSSRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKAGALHGIYQDATPFSFHETSDKLAVDYFGEQLQAAGYSYYGSEPLYSGVSGCIMQADLYLGVVYYQRLRHMVSDKYQVRATGSVNAVTRQPIKGRKQGGGVRLGEMERDSLLSHGAAFLLLDRLVNCSDRHVARACRRCGDLLGPTTERSSVLSAGQSAAEATNRARLRVYCRNPRCREATAEGADDDA------------------VEPIALPYVFRYLANELAGMNIKMTLDI 1291
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA) HSP 1 Score: 1239 bits (3206), Expect = 0.000e+0 Identity = 682/1318 (51.75%), Postives = 853/1318 (64.72%), Query Frame = 2
Query: 203 PSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGG----------PL---------LKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQ-------------VGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCAR--PDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKAL--------------------------------RDT----------SDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERF----GSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAE-SPSSLESVLIRLGVSPAGTGA--GDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVA---GKGSGPAAVARLKFCN---------AKPGAGLGGAGATK--LHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLS------------RASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHE--DDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
PSF + + K R+L APH+ES+N+FLE+GL A+ DI P + + D PL +K W E V + P K E + +L PRECRE GL Y G ++ D CYQ V +G R RR G+ P+MV S+ C+L P +L + REE E GGYFIV+GIER +RLLQ+P+RN+ AI R +++RG Y++ GV +RC+R DQS++T TLHY++TGGATL+F VRKQEFLVP V++L+AL R+T +D EI+ R++QGD+ NTFL A E+LL+D +++ S +E LA+LGS FR + + P + +D+++G ++ RF+L+HL ++ KQE LL MLRKLYAF G C D D+L N E+LLPGHL ++KE+ E L +R + +++R+N AK + + + +R +G+ ++TFLSTGN+ S+SGLDLMQVSG+TIVAER+N+LRY AHFRSVHRGQFF MKTT+VRKLLP+ WGFLCPVHTPDG PCGLL+HLA C ++ AP E S + L+ +LI LGV P G G DG + LPV +DGRV+GG S +L+ LR LKV V +LEVA++PP G GPYPGL L + AR+ RPVLH +G E IGPMEQ F++IACL D+R G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP H L PHRTDNK+Y+ PQA +VQT RHGEY+MD+YP GTNAVVAV+SYTGFDMEDAMILNKSSFERGFGHASV KT VDLR+ A G + +R+KF N + G+ G+ T+ L+ +G DGLP VG+WVK GD LYCV+DELTG KHKE E ACV++VR LG E + S + + SITLR PRNPVIGDKFSSRHGQKGV+SILWP EDMPF+ESG+SPD+IINPHAFPSRMTIGMLIESMAGKSGAMHG +QDATPF+FHE D ID+FGEQL++AGY Y+GSEPLYSGV+G +MHAD++IG+V+YQRLRHMVSDK QVRATG VNQLTRQPIKGRK GG+RLGEMERD+LLSHG AFLLHDRL+NCSDRHV++ C CG LLS + R V +AGQS ++ V + +PYV+RYLANELAGM IK+TL I
Sbjct: 13 PSFQKSHLHSNEYHSKIRSLSAPHVESFNYFLEEGLRRAINDIVPLEVDMIDPKAKKKEGSAEHPLKEAKGDFDSIKFWFERVKIAPPTKMTESGMK-RLYPRECREMGLMYSGTMIGDFCYQFVSRNKTKSGVREVVEGKVNRIPRRFGEVPIMVMSKSCNLSNKKPKELVKLREEQSEFGGYFIVKGIERCVRLLQIPRRNHPTAIQRSNYRNRGNTYTDLGVAIRCSRYNEDQSSITNTLHYLTTGGATLKFMVRKQEFLVPVVLVLRALGVEGGRELDSNVDYLQNGDDLSEDEDSGEEKKRETIGPRRGTRCFTDEEIYHRVVQGDETNTFLKARAELLLQDARKFSQSSPVECLAYLGSRFRPLSNKPNSCSDIDVGHYMIQRFILIHLPSYASKQETLLLMLRKLYAFAAGDCGVDNADSLQNQEILLPGHLISNMIKEKFEESLMDLRLQLLKEMRINFAKLIENSQKEMFWGRTVDRSIGLSSGGIGKKVATFLSTGNIISSSGLDLMQVSGYTIVAERLNWLRYCAHFRSVHRGQFFMEMKTTSVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCSILS----APARTETSNADLDELLISLGVVPCGVGGVDSDGRCASTHLSLPVCLDGRVIGGASSKVCRLIGTRLRCLKVAEKPC--------------------VPASLEVAFIPPGIVG-GPYPGLYLFTSAARLVRPVLHRSTGCAELIGPMEQPFLDIACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQN--PQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEAERRGSSTASGEKSRVKFGNKTIKKFASGSAAGSSSKGSSITEGFLYPNIGEDGLPEVGTWVKEGDPLYCVIDELTGADFAAKHKEKESACVQSVRLLG-EHISHSTTTQRQKMAPSQQDQKVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQEDMPFSESGISPDVIINPHAFPSRMTIGMLIESMAGKSGAMHGLFQDATPFSFHETGDKLAIDYFGEQLQAAGYNYYGSEPLYSGVSGCLMHADLYIGVVFYQRLRHMVSDKYQVRATGAVNQLTRQPIKGRKKGGGIRLGEMERDSLLSHGTAFLLHDRLLNCSDRHVSYACTRCGDLLSPATERSTVLSAGQSVAEATSKARLRVYCRN-----------------SACRNQAAREGANDDSVEPIVLPYVYRYLANELAGMNIKMTLDI 1283
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A1Z5JIB2_FISSO (DNA-directed RNA polymerase subunit beta n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIB2_FISSO) HSP 1 Score: 1192 bits (3083), Expect = 0.000e+0 Identity = 648/1267 (51.14%), Postives = 829/1267 (65.43%), Query Frame = 2
Query: 203 PSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGG----------------PLLKLWVEGVTVGYPGKKNEEAVSSK---LTPRECRERGLTYHGALLVDLCYQVGD--------GDPIRTQRRA-GDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARP--DQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTS-----------------DREIHERLLQGDKKNTFLAAHVEVLLRDGKRW--GLHSRMESLAFLGSTFRTVLSAPATATDVELGKKVVDRFVLVHLQRHSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQV-RDPKYMAKCFERFGS----AVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLESVLIRLGVSPAGTGA--GDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGSGPA--AVARLKFCNAKPGAGLGGAGATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHED-DRV-IDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
PSF P E+ R L APH++S+N+FL+ GL+ ++DI P + L D P L+ W+E V V P ++ + S+ L PRECRER L Y G + CYQ+ + G +R +RA G+ P+ V SR CHL P +L + +EE E GGYF+V+GIER +RLLQ+P+RN+ AI R +K+RG Y++ GV MRCAR DQ+++T T+HY++TGGA+LRF RKQEFL+P +++L++L +S D E++ R++QGD NTFL A +LL+D + L++ E LAF+G+ FR + T +D+++G ++ R++++HL+ +SDK ECLL MLRK+Y+F G C D D+L N E+LLPGHL VKE+ E +L+ +R I ++R + + + ++ D +Y K +R+ +G+ + FLSTGN+ ST+GLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA K++ PA + LE +LI LG+SP G G+ GDG A LPV +DGR+VGG S +T K +S LR LKV V PTLE A++PP G+ PYPGL L + AR+ RPVL SG+ E IGP+EQ FM+IACL +D+R G+TTH+ELDPT+MLSL+A+LTPFSD NQSPRNMYQCQMGKQTMGTP H P+R DNK+Y+ PQA +VQT HG+Y+MD+YP G NAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT VDL + A P+ A AR++F N G +E L DG P G + GD +YCV+D ++GK V KHKE E A V++VR L + D+ ASITLRFPRNP+IGDKFSSRHGQKGV+SILWP EDMPF+ESG+SPD+IINPHAFPSRMTIGML+ESMAGK+GAMHG YQDATPF FHE D+V ID+FGEQL++AGY Y+GSE LYSGV+G VM AD++IG+VYYQRLRHMVSDK QVRATGP+N+LTRQPIKGRK GG+RLGEMERD+LLSHG AFLL DRL+NCSD+HVA+ C+ CG LL + R V T GQSA + V + +PYV+RYL NELAGM +K+ + I
Sbjct: 10 PSFRNGHEPHLQDVEQLRELTAPHVDSFNYFLDVGLSQGIQDIEPAELCLVDPRKLSLQQQQQQLDWSEIPSLQFWIEDVRVSPPCRQQDGNSSNNNKPLLPRECRERNLMYVGPMTATFCYQIQERRNGQTFPGKTVRLPKRAFGNIPICVMSRACHLHQLEPKQLIQLKEEQNEAGGYFVVKGIERCVRLLQIPRRNHPTAIQRSNYKNRGNTYTDLGVAMRCARSNGDQTSITNTVHYLTTGGASLRFVCRKQEFLIPVILLLRSLSGSSVGAADVAAGSDRRGGITDEELYRRIVQGDDTNTFLVARAGLLLQDARARFRQLNTPDECLAFIGARFRRLSLKAETTSDIDIGHFMIRRYIMIHLENYSDKLECLLMMLRKVYSFAAGDCGVDNADSLQNQEILLPGHLMCAFVKEKFEEFLQAMRLGIYIEMRKDFVRTSAKLTHDQRYWEKMVDRYSGKGSGGIGKKVQHFLSTGNIVSTTGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKSKIMTY--PAKLNEKGMKDLEQLLISLGISPVGCGSSNGDGRAPSLHHLLPVCIDGRIVGGASASTCKKISVHLRSLKVSEPPI--------------------VPPTLEAAYVPPGNRGS-PYPGLFLFTGAARLVRPVLQRSSGKIELIGPLEQAFMDIACLDEDIREGITTHQELDPTDMLSLIANLTPFSDQNQSPRNMYQCQMGKQTMGTPCHSF-PYRPDNKLYRLQN--PQAPLVQTSTHGKYKMDEYPNGANAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMLVDLAEEAKMAGAPSSGAEARVRFGNKWD-------GDKYRYESLQEDGFPQTGDRITEGDPIYCVIDSVSGKDRVKKHKEREIAYVQSVRKLASDS-DKPSEEMASITLRFPRNPIIGDKFSSRHGQKGVLSILWPQEDMPFSESGMSPDVIINPHAFPSRMTIGMLVESMAGKAGAMHGCYQDATPFTFHESGDKVSIDYFGEQLQAAGYNYYGSEALYSGVSGCVMQADLYIGVVYYQRLRHMVSDKYQVRATGPINELTRQPIKGRKKGGGIRLGEMERDSLLSHGTAFLLQDRLLNCSDKHVAYACSRCGDLLMPTTERSIVQTTGQSALDAVNKPKLRLFCRNR-----------------ACMEASDRDDGNDDAVEPIILPYVYRYLVNELAGMNVKIKMDI 1225
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A8K1FE15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE15_PYTOL) HSP 1 Score: 1189 bits (3075), Expect = 0.000e+0 Identity = 645/1250 (51.60%), Postives = 824/1250 (65.92%), Query Frame = 2
Query: 95 MMASKGNTSSKRQGTSRPTSKTIXXXXXXXXXXXXGPSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQ-VGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLS-APATATDVELGKKVVDRFVLVHLQR----HSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVC-GGGPAPPPAESPSSLESVLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGSGPAAVARLKFCNAKPGAGLGGAGATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
M A K +KR + + KT PS + S P KT EK + LV+PH++S+N+F+ +GL AV DIP ++ + + P + LW+E +GYP +N+ KL P ECR+RG++Y L+V L VG + R QR GD P+MV S+RCHL G P +L + REEA EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+E V M+C + DQS +TVT+HY+ G ATLRF VRKQEF++P ++LKAL +DREI+ER+L+G+ +NT+L+A E++LR+ K++ ++SR E+LA+LG FR V+ + ++VE+G K++D ++ VH+ + + K E + MLRKLYAF +G RED D++ NHELLLPGHL+ MI+KE+++ L VR I +D++ + M D ++ K ++R + +GQ M FL+TGN+ S+SGLDL+Q++G+TIVAE++N+ RY +H+RSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA C++V A + L L LG+ P +G DGA +P+ +LP++++G+V+GG K ++ LR +K GV LEV + P GG +PGL L+++ ARM RPV + + R E+IGPMEQ FM+IAC D+RP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAH + HRTDNKMY+ + PQ IVQ R EYQ+D+YP GTNAVVAVISYTG+DMEDAMILNKSS+ERGFGHASV K VD+ +G+ ++ F N K G G KL DG P +G V GD L C +DE TG+ KHKE+E A +E + +G S ++A I LRF RNPVIGDKFSSRHGQKGVMSILWP E+MPFTESG+SPD+IINPHAFPSRMTIGMLIESMA K+GA+ G Y DATPF F E DRVID+FG+QLR GY Y GSEPLYSG++GTVMHADI+IG+VYYQRLRHMVSDKSQVRATG VN LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC CGSLLS + +R V TAGQ S VAMPYVFRYLANELA M IK++L +
Sbjct: 1 MAAEKSTKDAKR--SKKTADKTKRSKDFGTSWPATNPSSSSRSCPTKTN-EKLQNLVSPHVDSFNYFITEGLDLAVADIPKAIIDVPNQ-PQMALWIESAQIGYPTSENQITGERKLYPSECRQRGISYTAPLVVTLARSFVGSNNVERIQRVVGDIPIMVRSKRCHLYGLSPPELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQSAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLVLKALYPLTDREIYERVLRGEHENTYLSARAELILREAKKFSIYSRDEALAYLGKHFRHVMPYVYESMSNVEVGSKMLDDYLFVHIPKGEKGRTQKVELICLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYNMILKEKLQDQLAMVRANIVKDMQTSKRAVVM---DQVFIRKMWDRTTN-IGQAMLYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFSHYRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVSYPAHNADDYLQEELKLARFLTSLGMIPT-SGYTDGALVVPYHYLPIMLNGKVLGGAPAEVCKRIAEVLRHVKSAESADERKEH--------------GVVQNLEVCLIVPTLGGC--FPGLYLSADAARMTRPVKQMDTQRIEYIGPMEQVFMDIACTKADIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSIV-HRTDNKMYR--IQSPQIPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSSYERGFGHASVYKQIQVDIGTEGKQGN---KASKQYFSNLKAD-GSGEFCTAKLDR----DGFPHIGQVVNQGDPLACWIDETTGEAHYQKHKETEPAIIEQINMIGSSS-QASEFTKAGIKLRFCRNPVIGDKFSSRHGQKGVMSILWPQENMPFTESGMSPDVIINPHAFPSRMTIGMLIESMAAKAGALKGKYMDATPFQFSEKDRVIDYFGQQLREHGYNYMGSEPLYSGISGTVMHADIYIGVVYYQRLRHMVSDKSQVRATGKVNGLTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTNCGSLLSNATQRATVETAGQGEVAIAMK---------------------------SKTQWYCSVCQTGESCQAVAMPYVFRYLANELAAMNIKMSLSL 1185
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A2D4BW55_PYTIN (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW55_PYTIN) HSP 1 Score: 1188 bits (3074), Expect = 0.000e+0 Identity = 646/1219 (52.99%), Postives = 819/1219 (67.19%), Query Frame = 2
Query: 203 PSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQ-VGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLS-APATATDVELGKKVVDRFVLVHLQR----HSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSSLES------VLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKG-SGPAAVARLKFCNAKPGAGLGGAGATKLHEG-LGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTL 3817
PS S P +T EK + LV+PH++S+NFFL +GL AV DIP ++++ + + W+E +G+P +N+ KL P ECR+RG++Y L+V L G + R QR GD P+MV S+RCHL G PA+L + REEA EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+E V M+C + DQ+ +TVT+HY+ G ATLRF VRKQEF++P ++LKAL +DREI+ER+L+G+ +NT+L+A VE++LR+ K++ ++SR E+LA+LG FR V+ + ++VE+G K++D ++ VH+ + + K E + MLRKLYAF +G RED D++ NHELLLPGHL+GMI+KE+++ L R I + V+ + M D +M + +ER + +G M+ FL+TGN+ S+SGLDL+QV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA C++V PP ++ L+ L LG+ P +G DGA +P+ +LPV+++G+V+GG + K ++ LR +K Q GV LEV + P GG +PGL L S+ ARM RPV + + R EWIGPMEQ FM+IAC D+RP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAH + HRTDNKMY+ PQ IVQ R EYQ+D+YP GTNAVVAVISYTG+DMEDAMILNKS++ERGF HASV K VD +AG G G ++ + F N K A +L+ L DG P +G V GD L C VDE TG+ + KHKESE A +E + +G S ++A I LRF RNPVIGDKFSSRHGQKGVMSILWP E+MPFTESG+SPDIIINPHAFPSRMTIGMLIESMA K+GA+ G Y DATPF F E DRVID+FGEQL+ GY Y GSEPLYSG++GTVMHADI+IG+VYYQRLRHMVSDKSQVRATG +N LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC TCGSLLS + +R +V TAGQ S VAMPYVFRYLANELA M IK++L
Sbjct: 30 PSSASRSCPLETN-EKLQRLVSPHVDSFNFFLTEGLDLAVADIPKVLVEVPNQ-QTMAFWIESAQIGFPTSENQITGERKLFPSECRQRGISYTAPLVVTLARSFAGSSNVERLQRVVGDIPIMVRSKRCHLNGLSPAELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQTAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLMLKALYPLTDREIYERVLRGEHENTYLSARVELILREAKKFSIYSRDEALAYLGKHFRHVMPYIYDSMSNVEVGSKMLDDYLFVHIPKGEKGRAQKVELVCLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYGMILKEKLQEMLAATRSNILKAVQTSKKAVVM---DQAFMRQMWERTAN-IGNAMTYFLNTGNLRSSSGLDLLQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVTH-----PPHQADDYLQQELKLARFLTSLGMIPT-SGYADGALVVPYHYLPVMLNGKVLGGAPVESCKRIAETLRLVKSAESPAER--------------QEHGVVENLEVCLILPSLGGC--FPGLYLASDAARMTRPVKQMDTERIEWIGPMEQVFMDIACTQSDIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSIV-HRTDNKMYRIQT--PQIPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSAYERGFAHASVYKQIVVD---IAGDGRKGGSSQNKQXFSNVKANA------TNELYSAKLDRDGFPHIGQVVNQGDPLACWVDETTGEHHMQKHKESEPAIIEQINLIGSNS-QSSEFTKAGIKLRFCRNPVIGDKFSSRHGQKGVMSILWPQENMPFTESGMSPDIIINPHAFPSRMTIGMLIESMAAKTGALKGKYMDATPFQFSEKDRVIDYFGEQLKEXGYNYMGSEPLYSGISGTVMHADIYIGVVYYQRLRHMVSDKSQVRATGKMNALTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTTCGSLLSNATQRASVETAGQGDVAIALK---------------------------SKTQWFCTVCQSGDGCHAVAMPYVFRYLANELAAMNIKMSL 1179
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Match: A0A5D6YCW8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCW8_9STRA) HSP 1 Score: 1188 bits (3074), Expect = 0.000e+0 Identity = 650/1220 (53.28%), Postives = 814/1220 (66.72%), Query Frame = 2
Query: 203 PSFTLNSIPGKTTAEKRRTLVAPHIESYNFFLEDGLAAAVKDIPPQVMQLGDGGPLLKLWVEGVTVGYPGKKNEEAVSSKLTPRECRERGLTYHGALLVDLCYQ-VGDGDPIRTQRRAGDCPVMVGSRRCHLMGHGPAKLSRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARPDQSTLTVTLHYISTGGATLRFSVRKQEFLVPTVIILKALRDTSDREIHERLLQGDKKNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLSAPATAT-DVELGKKVVDRFVLVHLQR----HSDKQECLLYMLRKLYAFVQGRCREDRPDALANHELLLPGHLFGMIVKERMEGWLEKVRQFIGRDVRLNPAKAAMQVRDPKYMAKCFERFGSAVGQGMSTFLSTGNVTSTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGPAPPPAESPSS-------LESVLIRLGVSPAGTGAGDGAASLPFSFLPVLVDGRVVGGGSEATLKLVSAELRRLKVVXXXXXXXXXXXXXXXXGKSGQGGGVDPTLEVAWMPPMTGGAGPYPGLCLNSEGARMCRPVLHLHSGRTEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKASVLFPQAAIVQTRRHGEYQMDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGSGPAAVARLKFCNAKPGAGLGGAGATKLHEGLGWDGLPMVGSWVKPGDALYCVVDELTGKVTVGKHKESEQACVETVRALGPEGVDRSGLSRASITLRFPRNPVIGDKFSSRHGQKGVMSILWPTEDMPFTESGLSPDIIINPHAFPSRMTIGMLIESMAGKSGAMHGTYQDATPFAFHEDDRVIDHFGEQLRSAGYAYHGSEPLYSGVTGTVMHADIFIGLVYYQRLRHMVSDKSQVRATGPVNQLTRQPIKGRKNKGGVRLGEMERDALLSHGAAFLLHDRLMNCSDRHVAHVCATCGSLLSTSARRGAVATAGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASXXXXXXXXXXXXXKVVTVAMPYVFRYLANELAGMGIKLTLKI 3823
PS + S P KT EK + LV+PH++S+NFFL +GL AV D+ +++ + + LW+E VG+P +N+ + KL P ECR+RG++Y L+V L G R QR GD P+MV S+RCHL G P +L + REEA EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+E V M+C R DQS +TVT HY+ G AT+RF V+KQEF++P ++LKAL SDREI+ER+L+G+ +NT+LAA VE++LR+ K++ L+SR E+LA+LG FR V+ AT +V++G +++D F+ VH+ + + K E L MLRKLYAF +G RED D++ NHELLLPGHL+ MI+KE+++ L +R I +D + V D ++ K ++R + +GQ M+ FL+TGN+ S+SGLDLMQV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA C++V PA + + L LG+ P +G DGA +P+S+LPV+++G+V+GG A + A LR+LK GV +EV + P GG YPGL L+++ ARM RPV L + R E+IGPMEQ FM+IA ADDVRP TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQCQM KQTMGTPAH L HR DNKMY+ + PQ IVQ R EYQ+D+YP GTNAVVAVISYTG+DMEDAMILNKSS+ERGF HASV K VD+ GK G A A+ F N +PG+G + L DG P +G V GD L C +DE TG+ KHKESE A VE + +G S ++A I LRF RNP IGDKFSSRHGQKGVMSILWP DMPF+ESG+SPDIIINPHAFPSRMTIGMLIESMA K+GA+ G Y DATPF F E DRVID+FG QL+ GY Y GSEPLYSG++GTVMHADI++G+VYYQRLRHMVSDKSQVRATGP+N LTRQP+KGRK GG+R GEMERD+LL+HG AFLL DRLMNCSD+H+A VC CGSLLS + +R +V TAGQ + VAMPYVFRYLANELA M IK++L +
Sbjct: 26 PSSSSRSCPPKTN-EKLQKLVSPHLDSFNFFLTEGLDLAVADLAKVPVEIPNQHQMT-LWIESAQVGFPTSENQISGERKLFPSECRQRGISYTAPLVVTLARSFAGSAAVERIQRVVGDIPIMVRSKRCHLSGLSPPELVKRREEANEMGGYFICNGNERCVRLLQLPRRHHIMAVRRGAFANRGDLYTELAVFMKCVRRDQSAVTVTCHYLEDGNATVRFGVKKQEFMIPVGLVLKALYPLSDREIYERVLRGEHENTYLAARVELILREAKKFSLYSRDEALAYLGKHFRHVMPNVYEATSNVDVGSRMLDEFLFVHVPKGEKGRAQKVELLCLMLRKLYAFAKGDAREDNADSVMNHELLLPGHLYLMILKEKLQEQLAALRLNILKDATGTGSAKRTVVLDQVFLRKMWDRTPN-IGQAMTYFLNTGNLRSSSGLDLMQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVSH------PAHAADDFLAHELKVARFLATLGMIPT-SGYADGALVVPYSYLPVMLNGKVLGGAPAAVCARLEAALRQLKSADDAAERAAH--------------GVVANMEVCLILPTLGGV--YPGLYLSTDAARMSRPVRQLDTQRVEYIGPMEQVFMDIAVTADDVRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQMAKQTMGTPAHSLV-HRADNKMYR--IQSPQVPIVQNERLREYQLDEYPLGTNAVVAVISYTGYDMEDAMILNKSSYERGFAHASVYKQITVDI-GADGK-QGGAGAAKKYFSNVQPGSG------EQCATSLDRDGFPHIGQVVNYGDPLACWIDETTGQPQFQKHKESEPAIVEQINMVGSAS-QASEHTKAGIKLRFCRNPTIGDKFSSRHGQKGVMSILWPQADMPFSESGMSPDIIINPHAFPSRMTIGMLIESMAAKAGALKGKYMDATPFQFSEKDRVIDYFGAQLKEHGYNYMGSEPLYSGISGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPVKGRKKGGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTNCGSLLSNATQRASVETAGQGEVAVAIK---------------------------AKSQWYCQVCRDGAHCQAVAMPYVFRYLANELAAMNIKMSLSL 1179 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.81.20 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig60.81.20 >prot_P-littoralis_Contig60.81.20 ID=prot_P-littoralis_Contig60.81.20|Name=mRNA_P-littoralis_Contig60.81.20|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1246bp MMMASKGNTSSKRQGTSRPTSKTITSSARQQTTTTTGPSFTLNSIPGKTTback to top mRNA from alignment at P-littoralis_Contig60:391873..412761+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig60.81.20 ID=mRNA_P-littoralis_Contig60.81.20|Name=mRNA_P-littoralis_Contig60.81.20|organism=Pylaiella littoralis U1_48|type=mRNA|length=20889bp|location=Sequence derived from alignment at P-littoralis_Contig60:391873..412761+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig60:391873..412761+ >mRNA_P-littoralis_Contig60.81.20 ID=mRNA_P-littoralis_Contig60.81.20|Name=mRNA_P-littoralis_Contig60.81.20|organism=Pylaiella littoralis U1_48|type=CDS|length=3738bp|location=Sequence derived from alignment at P-littoralis_Contig60:391873..412761+ (Pylaiella littoralis U1_48)back to top |