mRNA_P-littoralis_Contig60.155.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig60.155.1
Unique NamemRNA_P-littoralis_Contig60.155.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig60.155.1 vs. uniprot
Match: D8LGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX5_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 3.960e-57
Identity = 179/328 (54.57%), Postives = 195/328 (59.45%), Query Frame = 2
Query:  197 RSVLGAVFGALAGAAGLRLWEGLAQRRRGGDCGGSGSAXXXXXXXEVDGEEAEGELLVAAEEEGEGGVGVQQATKIQALEDQLALLEEDRRRVVLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMVEKVRAEIAKALEQAQEGKQAAAAKAAEEVRRARSELEATQALXXXXXXXXXXXXXXXXASDALLRTEQGKGAVLEKEVERLRESTVALTQRLLDAVAKAERTAKEEQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEETARCRKEMETXXXXXXXXXXXXXXXXXXXXXXXXXRRLQEARAERAGSAGA 1180
            RSVLGAV  ALAGA GL+LWEGLA   RG         XXXXXXX                              I ALE+QLA LEEDRRR  L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAM+E VRAE  KAL+Q      AAAA A EEVR+AR+ELEA QAL                A DALLRTEQGK A LEKEVERL+EST  LTQRLLDAVAKAER  +EE++A         XXXXXXXX           EEETARCR+E  +                         RRLQEAR+ER G+ G+
Sbjct:  267 RSVLGAVVSALAGALGLKLWEGLA---RGDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTKALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLTQRLLDAVAKAERADEEERDAATAKAVAERXXXXXXXXAAR--------EEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGS 583          
BLAST of mRNA_P-littoralis_Contig60.155.1 vs. uniprot
Match: A0A6H5KQY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY4_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.960e-56
Identity = 172/329 (52.28%), Postives = 191/329 (58.05%), Query Frame = 2
Query:  194 QRSVLGAVFGALAGAAGLRLWEGLAQRRRGGDCGGSGSAXXXXXXXEVDGEEAEGELLVAAEEEGEGGVGVQQATKIQALEDQLALLEEDRRRVVLAAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMVEKVRAEIAKALEQAQEGKQAAAAKAAEEVRRARSELEATQALXXXXXXXXXXXXXXXXASDALLRTEQGKGAVLEKEVERLRESTVALTQRLLDAVAKAERTAKEEQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEETARCRKEMETXXXXXXXXXXXXXXXXXXXXXXXXXRRLQEARAERAGSAGA 1180
            QRSVLGAV  AL GA GL+LWEGL    RGG    + +AXXXXXXX                              I ALE+QLA LEEDRRR  L+AKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQES+TAM+E VRAE AKAL+Q      AAA  A EEVR+ R+ELEA QAL                A DALLRTEQGK A LEKEV RL+EST  LTQRLLDAVAKAER  +EE++A               XXX          EEETARCR+E  +                         RRLQEAR+ER G+ G+
Sbjct:  270 QRSVLGAVVSALMGALGLKLWEGLV---RGGASAEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESKTAMLEVVRAETAKALKQGSHATAAAAEAANEEVRQVRAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVVRLKESTATLTQRLLDAVAKAERADEEERDAATAKAVAEREEIETAXXXAR--------EEETARCREEFYSALAEEKKKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGS 587          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGX5_ECTSI3.960e-5754.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQY4_9PHAE3.960e-5652.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:618739..627254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2454
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_001550.1
Cds size663
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.155.1prot_P-littoralis_Contig60.155.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig60 621857..626064 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791252.8557088-UTR-P-littoralis_Contig60:618738..6191861680791252.8557088-UTR-P-littoralis_Contig60:618738..619186Pylaiella littoralis U1_48UTRP-littoralis_Contig60 618739..619186 +
1680791252.8710122-UTR-P-littoralis_Contig60:621080..6212001680791252.8710122-UTR-P-littoralis_Contig60:621080..621200Pylaiella littoralis U1_48UTRP-littoralis_Contig60 621081..621200 +
1680791252.8864071-UTR-P-littoralis_Contig60:621823..6218561680791252.8864071-UTR-P-littoralis_Contig60:621823..621856Pylaiella littoralis U1_48UTRP-littoralis_Contig60 621824..621856 +
1680791252.9446592-UTR-P-littoralis_Contig60:626064..6272541680791252.9446592-UTR-P-littoralis_Contig60:626064..627254Pylaiella littoralis U1_48UTRP-littoralis_Contig60 626065..627254 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791252.8986595-CDS-P-littoralis_Contig60:621856..6219101680791252.8986595-CDS-P-littoralis_Contig60:621856..621910Pylaiella littoralis U1_48CDSP-littoralis_Contig60 621857..621910 +
1680791252.9103105-CDS-P-littoralis_Contig60:622393..6225591680791252.9103105-CDS-P-littoralis_Contig60:622393..622559Pylaiella littoralis U1_48CDSP-littoralis_Contig60 622394..622559 +
1680791252.924777-CDS-P-littoralis_Contig60:623866..6241141680791252.924777-CDS-P-littoralis_Contig60:623866..624114Pylaiella littoralis U1_48CDSP-littoralis_Contig60 623867..624114 +
1680791252.9343655-CDS-P-littoralis_Contig60:625869..6260641680791252.9343655-CDS-P-littoralis_Contig60:625869..626064Pylaiella littoralis U1_48CDSP-littoralis_Contig60 625870..626064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig60.155.1

>prot_P-littoralis_Contig60.155.1 ID=prot_P-littoralis_Contig60.155.1|Name=mRNA_P-littoralis_Contig60.155.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=221bp
MVEKVRAEIAKALEQAQEGKQAAAAKAAEEVRRARSELEATQALLEAALQ
EKAAAVQEKAASDALLRTEQGKGAVLEKEVERLRESTVALTQRLLDAVAK
AERTAKEEQEAAEAKAGAEEVEQAKAAEAAVAEAVATAREEETARCRKEM
ETALAEEKEKLRKQMEARVATMRAGLKRRLQEARAERAGSAGARAGASGS
APAAGGRPPKITGPNSSRPK*
back to top

mRNA from alignment at P-littoralis_Contig60:618739..627254+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig60.155.1 ID=mRNA_P-littoralis_Contig60.155.1|Name=mRNA_P-littoralis_Contig60.155.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8516bp|location=Sequence derived from alignment at P-littoralis_Contig60:618739..627254+ (Pylaiella littoralis U1_48)
AAACAGTGCTCCTCGGTGGCCGGGTTCCGCAGGGGACGGCCTCGGCAACG GCGGCGACTTCTCGTTGCCGTCGGCGCTGACCTCCGCCGCACCCGTGAGA GGAACAGCGGAAGCAGAAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGC CGATAACGGCGATCCCAGCAGTCTGCGGCAGCGGCAGCAACAGCAGCGGT CGGTGCTTGGTGCTGTCTTCGGAGCGCTGGCGGGCGCCGCGGGGTTAAGG CTGTGGGAAGGGTTGGCGCAGCGCCGTCGCGGCGGCGATTGCGGCGGCAG CGGGAGTGCGACGGCAGCGACTGCGGCGGCCGAGGTTGACGGCGAGGAAG CAGAGGGGGAGCTGCTGGTAGCGGCGGAGGAGGAGGGAGAGGGAGGGGTC GGAGTGCAGCAGGCGACGAAGATTCAGGCGCTGGAGGATCAGCTGGCGGT GAGAGAGGCGTGTCTAGCACTGCTGCCTGCGCGTGCTACATCATTTTTGA TATTTAGAGAGATGAGTGTTTTCGTTCTTTCTCCGGAGGTGTTTAGCGTT TTCTTGTTGTTGACGATGATCCCGAGGAGGGGAACTGCGTGCAAGGCGGC TGGCTGCTGTCTCTCTCAAAAAAAGTTGTCGACTGCTCGTTCTCTCTGGG GATGAAATGAAAAGGTTTTGTCAGTCGTGAGGCGATCGTGAGGCCCGCCA CAAGAAACGCGGCCACTAGCTTTGGGATATACGGCCAGAAACGCATCAGA TTTTTTACCGTTAGATTCTTGGAGCGCATCACCTTCCCCGTTGTTCATCC CGCACCCTTGATTGACCCTTGGCTCTCGATCGCGACTGTGCACATTTTTT GTTTATCTTCCATGTGTGTGATAGTTAGTGCCAATGTTGATGTTCATGTT GATGTTCATGTTCATGATCTGTGTTGTGTTGATGTTTATTTTTAGTTCAA GTTTATGATCATGATCATGATCATGATCCTGTTCATAATTCATGTTTATG TACGTGAGTATATATCGATGTTAACATCCGTGCTCATGATCATGATCGAT CATGTTCATGATCATGGTAAGGTGTGGCGTCATCACGCATCATGTTTCCG TGTCCCCGTCGTACATGAAAAGGACAGCAGTACGGACACTTGTACACGCA GAACGCAAAAGCACTGCCGTTCAAGATTACACACAGCAGGCTGTGTTCGA CTTATCAGGAAAATACCTCTAAAATTCCGGCAAAAGCTTTCTGTTTATTC GTCTTTGCCGTTCTCAAAGTTTTTATGCTGTATACCCCATACTCCTTCTG TATACCTTACGTGACGGAAGATACCACACCCGCAGAACCGCTTTTTCGGG TCGTTTACTGCGTAGCGAAGAGGTTGTCAACACCAAAACGATATGTTTTC GACAAGCTCTCGACGAAACATTTTCAACACTGTATAACATTTGCTTGCAC TGACGCTCGTCTTGCCGTGGAGTAATCAACCGCTCAAAATCAGTCCACGG GATATATGGTATCATCCGTCACCCGCGTTCCATATACTTGTGAAAAGAGG GAATGAGTCCGTCCTCGACAGACGTTGTGGGAATGTACCCCTTATGAAGG GGTCCTGTTCCACACTACAGTACCCCCCCCCTCTTCTTGGTTGCTAGACA AGAAGAAGGCTTCCAGGGGTGACCGAAACCCGACCGGCTGGCGGCGAGTC GGGTCCGCCTTTTTCTTCGTAATTTTCTGTACTTTATTGCGTGTTGTGCA TGTGCTACGGGTCGACTGCTCCCGCAAGTTTCGAGTTTATCGCTTTTGGT CCTCACCATTGAGTGACACAGGAATGGTGTATGGCGGGGTTTGAACCCGG GTTGGAGACCACCAAAAGTAGACACTCTATCTTCGACGCCAATGTGAAAA GAGGGAATGAGTCCGTCCTCGACAGACGTTGTGGAACGTACCCCTTGTGA AGGGGTCCCGTTCCACATACTGCTGTATTTACTGTTATAATTATTTTTTT TTCTTCTTCTTCCCCCCTTGCTGTCGCCCTGATACAGTAGGGATTTAGCA CATCGTGCATTGCTTGTCTTTGTCTATTGCCGTCGGGGTCTTGTGCTAGA CATCGGGGAGTTTCGTATTTTTAGCTTGTTATTGTCTCTGCCGTCGCCAT GGTGCCTGGTTCTTATGATCGTACTGGTTGTATTGTTCTCGAGATTTAGA GTTTTATGAACCTGTGTCCCTTGCACTGCTGCTGTTTTGTTCATTTTTCT TCCTTGTTACGTCCCTTTCGTACTCTATTCCGTGCCGTCCCCGCCTCGAC TGTCTCCGGGGTTTCGCACTGCCTGGTATGGCTTGTGTGCAGTTATTGGA AGAAGATAGACGGAGGGTGGTGTTGGCGGCGAAGGAGGCGAGGTCCAACA GACGCAAGGACGACCGACAGCTCAAGGAGTACGTGCACACGCTAGAAGTG CACCTGGACCAGGTGGGGGGCTTCTTATCATAAGTACAGTACTCTCGAGT GCAGAAACGCCTGTCCCCTGTCGAACAGGCATATGAATATCGGGCTGTCG GTTCTCGGACCTTGATGTATCGTGCCGCTCCATGCAGAGTGCCGTAGGTC GCATGATATACCACACCCCCTGGACCGATTTTCAAAGCACGAAAAGAGCG TGAGTACCGGAAAAGGGCGGCGTTGGAACCATCTCGTCGAAAGCTTTCCA AAAAACATACATACATGTAATTCCGTTTGATGTTGGCACCCTCGTAGGTG TGGAGTAATCGAGGGTTGAAAATTGGTCCAGGGGGTGTGTCATCTTATGC GACCTACGGTACCTCGTGCTCTGTCATACAGCAAGAACCTTTCCTCGAGA GGCACTGTTGTTGGGATGGAGCTTTGCTACGCTCAAGAGTGTGCTCTGAT TGCTCTTCTCCCTCCCCCCCCCCCCCTCCACCAACCAGAAATATTGAAAA AGAAGCGCGAACCGTATCATACGAATCCCCGAGTTGATTATGCTGATTTG GCGTAACCCCCATCCCCCCCCCCCTACCCCCTACCCCTTGCCGTCCCCCC TCCGCACGGGCTTGATACGCGGGACGTACCTGCAGCTCTCAAAGGAGAAA CAAGAGTCAGAGACGGCTATGGTGGAGAAAGTTAGGGCCGAGATCGCGAA GGCTTTGGAGCAGGCGCAAGAGGTACAGCAGTAAGGGGAACGGGAAAGGC TAGAAAAGGGTAGGAGGGAGAAAAGAACGAGCGCGTGTGTGTAACGTGTG GTATGAAATACATTGGTGTGATGGTTCGACCGTTTTGTGAGGTGCGTTTC GTGCGCTCTTCGCCCACGGAGATGCAGGCCTGCACGGAAAGACCTAACGA GTGCCGTCCGCATTTTTTAGCTCGGATAAACATTTCCTGAGGTGCAATGC AGATGTATCATACTCCGGAGTACCATGTACTCGTACCGTTTTTTCTTTTG CGGTTGGTGAAACAGACACGGACCCCTCCCCTTGAGCCCGAAACGAAGAT TAGGTACCGTTGAGCAGTGGCAACCAACCCTCTTCGCTACGGAGCGATCG ATCGAGAGGGGCTGCCTGACTGAAAGTGACTTGACTGACCGGCTGACTGA CGCAGCAACCGACTGACCGTCAACATTTTTCACAAAAAAAAAAAAAATCG CGCAGGGAAAGCAAGCCGCGGCGGCAAAGGCCGCGGAGGAGGTGCGCCGG GCGAGGAGCGAGCTCGAAGCCACGCAGGCGCTGTTGGAAGCGGCTCTGCA GGAGAAGGCGGCGGCGGTGCAGGAAAAGGCAGCTAGCGACGCCCTCTTGA GGACAGAGCAGGGCAAAGGGGGTGAGAGCGTGCCTTGCGTGCGGCTGCAC TGAAACTACGCTTGAAGCAAAAAACTCGGTGCAGTCTGCTGTGCCGGAAA TTGGTCAAGAAAGGGTATACCTCGCACCTTATTTTGACCGTTTTTTAAGG TTTCTCCAGCGATCGGGTCCGTCCACAGAAAAGCCTAGCCCTCCGAAAAT CCGTAAAAAAAGGGTATACCTTGCACCTTTTTTTGACCGATTATTGCAGC ACACCCACAGAACCCACCGCGCTCTCTCATGTTTGTTTCTGTGCATGACG CTAGCGTTGCTTTTTTTGTGCGCCGTGCGTCGCGGGCATGTGTTTTTGTG TCCCCAACGCCGCGAGGCGGCAAGGGTGAAAGCGCCGGTGTTGTTCTGCT GCTGTGTGGTGCTGGTTGCTGTGTGGAGGCGGTGTGTATCATACCTTGCT TGCAAGCTTTTTTTCCTTTTGGTTTGTTTTTTGCGCTATTTTTTGTACCG GCGGGAAAACCCGAAAGTTTGTTGGGTGTTTTGGGTGAATGGAAAGGTCC TGGTCCCGTGTGGGATGGCGCGGCAGGCGCGAGCGGACGCCGCGTCGGTT ACAAGAAGGCGGGAGAACTTACTGCACACGTTGCATGGAAGAACACGCGG GGAGTGGGGGTCACTTTCCGGGGTTGTGGAGGGGTGGTTATCGTCTGTAT ACCGGGCTCATCATGTGGTATTGCACAGAAACATGGTTTATATGTATGTA CGAAGTATATTTTTTTTGTAAGTGAGGGGCTACCTCTCCCTGACCGCGAA ACGCTCCGCGGCAGTTACATACCAGAGGGGTCCTGCGCGCCCGCCTCTAG CATGCGGCAGAAACTCACCCGCGCGCACAGCACCCTACACTGAGATTCTG TTTGAGGAGAGGAGAAAACGGAAAAGTTTTACACGGTACCAGGTTCTGCC ACCACGCAGCACCAGCGTGACACACGCGCAATGCGTACGTACACCTGTGT GCATCGACTAGCGGGAAGCGCCTTGGTTGTATCACGCACACGAACAAAGA CGTTGGTTGAGATCTTGGGCGAATGAAAAGCGGGGGAAGGAAACGTGTGA TGGGGGCTTCTATGTAGGCACAAGCCGAGGTCCTCGACTGCTTGCAATAA TCGCACAACATGCTCGTTTTTTCTCCAACGTTCTCTCCCCCACCCAATTG CCCCCTCTCCCATTTTTTTTTCGAACCGCGCGTGCCGACAATTTCGGTAA CCCCCCCCCCCCCCCGTTTCTCTGACGCACACGATTTTCCCGAAAAATGA CAACACGATGATGATGCCGCACCACCAGCCGTGTTGGAGAAGGAGGTCGA GAGGCTGAGAGAATCGACCGTCGCGCTCACGCAGCGGCTGTTGGACGCCG TGGCGAAGGCCGAGCGCACCGCTAAGGAGGAGCAAGAAGCGGCAGAGGCC AAGGCCGGAGCGGAGGAGGTGGAGCAGGCGAAGGCGGCCGAGGCGGCGGT GGCGGAGGCGGTGGCGACGGCACGGGAGGAGGAGACGGCGCGCTGCCGAA AGGAGATGGAAACCGCTCTCGCTGAGGTGGGTGGGTGGGTGGGTGGGTGG CGCAGAAAAACGGCTTTGCTTGTAGCCGTGGCATTCGTTTGCTGTCCTGT GGCGGAAAGGTAGATTTCGAGTACGTGCGGGCGTGTACGTGCTTGTTGTT TGTTGTTGATTCTCACATTAGCTTACTACCGCCGCAGTCTAGCCCGTGGT CACAAACCAGGCACATATCGTGCTAGGAGGAAAACGAAAAAAAAGAAAAT AAGTGGACTATGATCACCCACAGTCAAATCAGATAGGGTACCGTTGGGGT ACCTACCACCTGTGGTGGCAAAAGTACAAAACAAAATGCAGAAAATAAAA TAAAATACAGAAGATAACAGGTTCGAAAGAAAAACAAAAACAAAAATTGG AAACAGCACAAATATCAAGGCAAACCTTAACCATATACTTCGAAGTACTT CGTATACCGAACCAGAGCCCAGGGCCATGACAAACCAAGGCAAAGGCAAA CCAGGGCGCATGGTCCAGTAAATGCATGATCAAAAGACGAAAGACAAAAA AATAAAAGAAGACACAGGGAGGGCACAAAGACTGAGGGAGTGCACTCGTA CACAAACACAAAAAAACAGGCCGCCAAATAAAGAGGAAGCAGGGAAACGA AAGGGGAAATAAAAAAGAGTCAAGAGGAAAAATACACGGAGTGCAGTACG TGCGTTTCCGTGTATGTGTTTTCTTGTCAGGTAGCTGACCGAAAGTGACA GCACGTCAGTTTCATTGTGTGGCAGATCGAAAACAACCATGAGTTACGGC AACGGGGCCCCCGATGGCTTAGCGGGGGGGGGGGGGACTTGTGGCGGGCT ATGGACGCCAGGGTCACAACCTCTAGATTCAACCTCTAGATTCAGAGAAA AACGCACACCTCTCTCTGCTACATTGGGTGTAAAGTAGCCCTTGCTGGGG GTCGGTGCTGCTCACTAATTTCACAGAAACGTTTTTTAGTAGGGTTTCCG GGCGCGTTTCTGGCGTGTCTTCATTCGCATATGCTATCAACGTACGTGCG TACTTCAACCGTTTGGTGTGCGTTGCGTGTGCAGCTACACGATTGTGCCT TTGTTGCCCTCGCGCGAGGTGTTTTGAGAGTGTTTGGTCGAAGGAGGGCC CGTCTTGGCGGCAGAAAACGTGGGGTCTTGTCGTAAACCTGGGACTATTT TTTTCAGCGTTTTTTTTTTCGTGTGGTATGATGTGTTTTGGTGTCCTGCG TTTTTATCCAGTACGTGGATTTCGACGCTAGTCAGTCATGCCGTAAAAAC ATCTAAACAAGTGTCTTGGCCTCCGAGATAACTCAGCCCCATCGTGACTA CATATACATGACAAGCACTTACAGGAGCTTCAGCTGTTGCTGCCGCTGCT GCCGCTGCTGCTGCTGCCGCTACTGCTGCTGCATGTGGCATCAAAAAATG GTTGTGAATTTTCACGTCCGTCCTTGCAGCAGTTGAAACGCTTCTTGCAT TTCCTCGGCATTCCGCACTCATCCAGTAGTCCGAATCCGACCTCTGGATG GGCCGCCTCCCTGTGACCCCGTCCAGCAGTACACAGGCGTAGGAATCATC GTCGCTCCCTCAGTCTTATTTTGCGTGCACGGCATTGTTTGCGTCGTCAA ATGACACCAAAATGCTCATTGCTGACACACGCACACCCCGAGACACACCC CGAGAAGCAGCACACATACGAGCAAATTGGCCGTACCTCCGGCGCCCCCC CCCCCCCCCCCCCCCCCCCCCACCCTCTCAGGAGAAGGAGAAGCTCCGCA AGCAGATGGAGGCGCGCGTGGCCACCATGCGAGCCGGGCTCAAGCGGCGC CTTCAGGAGGCGAGAGCAGAGCGCGCAGGGAGCGCCGGTGCTAGGGCTGG CGCTAGCGGCAGCGCCCCTGCTGCGGGAGGAAGGCCACCAAAAATTACCG GCCCGAATAGCAGCCGACCAAAGTGACAGCTTTGTTCTTGTCTTTCGTCG TCTCTTTTTTATTTTCCCCGAAAGAGTTGGCGCTAGACCCAACCCGCAAC GGTTCAGGGTTTGCGGTGCGGGACTCCTATTTATTGTGAGCAGTCTTGAG CTGCTGTATGCTGTAGTGAAGACAGAGAGAGAGAGAGGCGTGTGCGGCGT GTTTTATGTAAGGTTTGCGAAAAAAAAGAAGAGAAAGTGGTGAGCGAGCG ACGAAGCAACCCTGAGGACGCACTTCTTGCTGACAGGGATATGATACCGG ACACGAATTTCACACTTCCGCGAGTACCATACGGATGTGGTGGATTCTTG GGCATTGTTTTTTGTGAGTGAGGTTGTTCCGCGCGTGTTTCATCTGCTTG CGTGCGTGCGTATGTGCGTGTGTTTTCATCTTTTGTTTTGTGTTCTTTGG GTTGTCATATAACCGATATGATTCCGACGTATTTGAAGCTCTGCCGCACG GCTTGATGAGTAACTTTTTTTTTAAGACAGGCCGCACCCTTTGTAAAGAG GCGTGTCCTGTATCCCCCCCCCCCCCCTCGCATTTCCTGTCCACGGCGAT GTTATTTTAGTCGCGTCCATTTTCGACGCGTCTTTTTCGCTCAAGTTTCC GACGACAGTGAAGAAAATTGATTCGTGGTTGGCACGCGGTCCTCTTTTCC AGTTTTTGCAGGAGCAGAAATATGCGCGCTTGGTTGCTTGTACGTTTTTG AACCACAACATTTTTTTCTTGTTCGCTTCTGATTTTTTAAGCAAGTGCTG CACGTACCGTACGGTGTGATCAAAACCGGTGCAAAAAACGCTGACGTTGC TGAGATTGGTGACGCTTGATTGGTTGAGCGTGCGTGTTGTGTGCCTTCTA CACACGTGACGCTTGTTTTTTGCAACTTTTTTGATATACATGTTGTATGT ACGACGGCATTTATTCAGAATGTATCATTTAGACCTGGTGTTTCGTTTTG AGAAAGGACGACCCAACATTACAAAACATCCAACAAGTAGTCGAGGTGTA TATAGGTGTTCCACACACCTAAGACGGGACCCAGGGCAGGGGGGATACGT GTACGTTCGTCTCGAACGCCTCCCAGGGACAACTTTCCGTTCCGTGTACT CTCGGTCCAGAACTCTGCTGCCGCCGCCGCGATCAAGTCCAGTGTGTCGG GGGTGCGGGTGCGGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig60:618739..627254+

>mRNA_P-littoralis_Contig60.155.1 ID=mRNA_P-littoralis_Contig60.155.1|Name=mRNA_P-littoralis_Contig60.155.1|organism=Pylaiella littoralis U1_48|type=CDS|length=663bp|location=Sequence derived from alignment at P-littoralis_Contig60:618739..627254+ (Pylaiella littoralis U1_48)
ATGGTGGAGAAAGTTAGGGCCGAGATCGCGAAGGCTTTGGAGCAGGCGCA
AGAGGGAAAGCAAGCCGCGGCGGCAAAGGCCGCGGAGGAGGTGCGCCGGG
CGAGGAGCGAGCTCGAAGCCACGCAGGCGCTGTTGGAAGCGGCTCTGCAG
GAGAAGGCGGCGGCGGTGCAGGAAAAGGCAGCTAGCGACGCCCTCTTGAG
GACAGAGCAGGGCAAAGGGGCCGTGTTGGAGAAGGAGGTCGAGAGGCTGA
GAGAATCGACCGTCGCGCTCACGCAGCGGCTGTTGGACGCCGTGGCGAAG
GCCGAGCGCACCGCTAAGGAGGAGCAAGAAGCGGCAGAGGCCAAGGCCGG
AGCGGAGGAGGTGGAGCAGGCGAAGGCGGCCGAGGCGGCGGTGGCGGAGG
CGGTGGCGACGGCACGGGAGGAGGAGACGGCGCGCTGCCGAAAGGAGATG
GAAACCGCTCTCGCTGAGGAGAAGGAGAAGCTCCGCAAGCAGATGGAGGC
GCGCGTGGCCACCATGCGAGCCGGGCTCAAGCGGCGCCTTCAGGAGGCGA
GAGCAGAGCGCGCAGGGAGCGCCGGTGCTAGGGCTGGCGCTAGCGGCAGC
GCCCCTGCTGCGGGAGGAAGGCCACCAAAAATTACCGGCCCGAATAGCAG
CCGACCAAAGTGA
back to top