mRNA_P-littoralis_Contig60.109.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig60.109.2
Unique NamemRNA_P-littoralis_Contig60.109.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig60.109.2 vs. uniprot
Match: A0A6H5KJF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF3_9PHAE)

HSP 1 Score: 1447 bits (3747), Expect = 0.000e+0
Identity = 966/1738 (55.58%), Postives = 1107/1738 (63.69%), Query Frame = 2
Query:  152 VESLPRTNPDFEACRLRSMLCDQLEARLGAAVDEALVSDDLEVSSSGGVCPKDIDEVVARLVDSSRFVGVVENARATVVQQVAGVQKVASGATNTTAAVAGNSSTILNAATGNFLRRNLDALLSSSDAEGEGTRHVKKKAARRDDWVGIFDLSGGFGAGGGGFSPRVDIEGALGQLEAGLESSVPGSATSAVEALGLLAEADPELFQFGNHWPLFLELARRALDSADPAVHAKGMTLHWVMYEKSMGMCAADMCEGVLAHARGYFSTTVHVLSAPPTQHSTAXXXXXXXXXXXXXXXXGDAAAAGLMVVGDSKLACAAREARALHGMLMTIHETFQHLPERRVWSIVSSFFSLFGDAIASLEEVHGNSTAWDRASGDPAAGG---EEKDVDRS---GSGSRGGCS-AVPLGDDQSSPLSGRGGSPSSTVLLPAHFLAVAGRVDEWLPGWLRSLPTGRLVRAVNDAGLLGEMARRCTLLGHIPFHGLN-----RGSNPKVPPAXXXXXXXXXANGTDATVPSCVPASEPSDVCLPTAALVRHRLGLSAGSSSAGAFCSMGSAAPLGRALWLSAAELERSLVLQSVSFLGIVTTHCRGILRPCPPPPSDDHDDGSEDRALPAGTTESEAGDGGIDRGLEQGTRVVRALVQCARRRETCRAERNGMKKSRSARRQRLPVDGARSGSVSCVALGYVLKLAKATAGGESTPFTPSAVDCLFSPLGGGAQSDLRGRDGSAGERDGGGRGDDGCGRESGRLLVDEPPAFLGALAEIAGVLLSSRGSSAGFFVEGPEGPQASRALLELVRCAAELARRVCRHGGRAGEKPGSEMLPGGHADATECRPPSREEEREDSERLAVDFACALAPIMGNPPKQRAAGWTALWQAGVPYALARLVEHLDHHGLDRAAFGTASQRPTSDRDAA-PSPRGSGDGXXXXXXXXXHDRYSAKQNGHLRDRLLLSLAEWARDLAGVQYLRRVGLAGPCGSILSRELGRRRLNRSTRKECADPRPLALAMRLALYAEGLSALLSADGGVVNAVSGGLNRLGESLTLPELLQSHVVGLPPPHALAARSNSGHDGGVGGFTGRAGVGSSAVLELCSDAGDLRCLEFICRMSLVGEFSLGSDACTAG--QMKQWLRWGLVRAVAPIGESWLDAGEAVADE-VDSYVSEDVRVVALQLVTNLASDLSTAVAIEAEWSLSELLARQMGAEGEPAGGVRTSDDAVVGGEAAGRVATK--EGVG----SDGGSTFDAGSI--VCVPDIVEPAALGRARLAVSLTCLGGPNEERHELLRRLREAEASVAVGATVASGLKNVAAASARRTASGARNKVSVKGVEFPIDSALDEAWWVAAGRCVLKVVRCLSGSRGSRSAEAFALLRNGAARRSPLWPKEATACSAAQRAVMDSAYPRSSGDMRCSSLEGDWPVKRDEVMSKLCFSYARSLGFVDDDGDQDRFGAGLKDTMAAAA----GLTANS----TPEPP-DCDWFAAVAFIASGMDSAAASGLLQDLHRHIPRALFVLPLAGKRYAEWVVALETAVSASVPGESTLPAASEEELSFAGATGDLADETAGINREPRAVRSPSVGGXXXXXXXXXXXXXXXXXXXXXXXXXEVLEEELPLMSAALRSAGWAAAPLAARWMRQSMLCVVDWPGVVAYLALALLRGHDYQVYFVVALFRTAQPRVVEAASRGVDLMALLGRGEALEGFQLEDSLSFMEELERRHRPRCLASTRGYFA 5266
            V+SLP+T+ DFE C LRS L  QL+A+LG+AVDEAL   +L +  +  VCP  I++VVARL  S  FV VV  AR  + +Q A  Q  A+    T  A A + S     A G  LRRN+DAL SSSD E E  R VKKKAARRDDWVG+FDLSGG G   GG SPRVDIE ALGQLE GL  S   SATS+VEALGLLA+A                                 MTLHWVMYEKSMGMCAADMCEGVLAHARGYFS T+HVLSA       A                 D   A LMV+GDSKLACAAR ARALHGML+TIHETFQHLPERRVWSIVSSFFSL GD +ASLE           A GDP   G    + DV+     G G+  GC  A PL D  S     +G   +STVL+ AHFLAV GRVD+WLP WLRSLPTG+LVRAVNDAGL+  M RRC   G IPF   N      GS+P V  A         +NG   T     P S P + C P AA+VRHRL +SAGSS  G F S GSAAPLGRALWLSAAELERSL+LQSVSFLGI+ THCRG+LRPCPP P D+  DGSE+        E EA DGG++RGLEQ   V++ALVQCA   E  R E +    S  +RR       ARS SV  VAL YV +LAKATAGGESTPF+  AV  LFS L G  +S   G+ GS GERDG     DGC RE+     ++  AFLGALAEIAGVLLSSRG+SAGFFV+GP+G QAS ALLELVRCAAELARR C H    GEK  +E    GH D  E    S E  + D ERLAV F+CALA IM NPPKQRAAG  ALWQ GVP ALA LV HL+H   +  A  + +Q P   R+   P+ R S  G          +R     N  L DRLLLSL +WARDL GV YLRRVGLA PCGS L+RELG R LNR TR ECA PR LALAMRLAL  E L+ALLSADGGVV+ V GGL RLGE  TLPELL+S +V LPPPH L AR   G D G GG            L+L SDAGDLRCL+ I R++L G F L SD+ + G  QM++WL WGL RA AP     ++AG     E  D YV +DVRV AL +VTNLA+DLSTA+AIEAEWSL++ L +QM    E      TSDDA VGGE  GR A+K  E  G    SDGGS+     +  VCVP+IVEPAAL RARLAVSLTCLGGPNEERH LLRRLR  EAS A G TV SG +N +A SAR TASG R    +  +EFP + A DE WW A  +CV  VV CL+    +R  EAFALL + AARRS L PKE T   A  RA  D A P   G+      +G    +R EVM KLCFSYAR LGFVD+ G ++ F +GL+ T+A  A    GLT+ S    TP  P   DWFAAVAF+ASGMDSAAAS +LQ LHR I RA F+LPLAGKRYA    A +TA   +   +   PA   +E++  G T ++AD  + +   P       + G                         E+LEEELPLMSAALR +GWAAAPLAARW+RQ ML +VDWPGVVA+LAL+LLRGHDYQVYFVVALFR AQP V+EAAS+G+DL  LLGRGEALE F LE+SLSFME LERRHR RC+A+T+ Y A
Sbjct:   19 VQSLPQTSADFETCSLRSTLYGQLDAQLGSAVDEALGLQELRLDPADAVCPDAINKVVARLAASPPFVSVVNKAREAI-EQAAEAQLAAAA---TPVANATDGSVAATGAAGVVLRRNVDAL-SSSDTEREDMR-VKKKAARRDDWVGMFDLSGGLG---GGISPRVDIEAALGQLETGLGGS-GSSATSSVEALGLLAQA---------------------------------MTLHWVMYEKSMGMCAADMCEGVLAHARGYFSNTIHVLSA-------ASVHRRHMPAGGKGTETADVGTANLMVIGDSKLACAARMARALHGMLVTIHETFQHLPERRVWSIVSSFFSLLGDTVASLEG----------APGDPTGSGMIDSDSDVNPDCLEGDGNGNGCGYAAPLPDRVS--CQSKGNPTTSTVLVSAHFLAVVGRVDDWLPAWLRSLPTGQLVRAVNDAGLVEAMTRRCKSHGQIPFCSRNICHRPSGSDPAVAAAVV-------SNGARGTAGPTAPESAPPESCQPKAAVVRHRLSVSAGSS--GTFSSAGSAAPLGRALWLSAAELERSLLLQSVSFLGILATHCRGMLRPCPPIPDDE--DGSEEPVTRV-EREREAIDGGVNRGLEQAEEVLQALVQCAWDIEERRTE-SATGASLLSRRAHPTTKRARSRSVRFVALDYVERLAKATAGGESTPFSAVAVQHLFSSLDGAKRSG-GGQRGSFGERDG----SDGCMRETDESPGNDCAAFLGALAEIAGVLLSSRGASAGFFVDGPDGLQASCALLELVRCAAELARRACWHCCPRGEKSENETSAEGHGDKAEGGFMSLE--KGDLERLAVRFSCALASIMCNPPKQRAAGLQALWQGGVPQALATLVLHLEHPRPEELA--SPAQAPQQAREGKQPASRTSDGGNDAVGYQEFEER-----NTDLHDRLLLSLVQWARDLEGVNYLRRVGLAAPCGSFLARELGWRHLNRLTRDECASPRSLALAMRLALCEEALNALLSADGGVVDGVEGGLTRLGELSTLPELLESQMVDLPPPHTLDARRVGGDDSGAGGLFEEELPRRFPGLKLGSDAGDLRCLDVISRVALSGSF-LCSDSASLGARQMERWLHWGLSRA-APCANPRINAGRVATKEGEDGYVPQDVRVAALHVVTNLAADLSTAIAIEAEWSLADTLVQQM--SDEEMVDACTSDDAGVGGEGVGRTASKSRESSGTPCNSDGGSSGGKHGVGSVCVPNIVEPAALSRARLAVSLTCLGGPNEERHVLLRRLRHLEAS-AGGVTVNSGKRNASATSAR-TASGVRG---MSEIEFPGEDASDEDWWSAVDQCVPTVVACLTDPDVARRKEAFALLSSAAARRSLLLPKETTRRLAEPRAA-DCASPCDDGERGGPEPQGSMFDRRQEVMVKLCFSYARDLGFVDN-GCREVFASGLRATLAGVAEPTAGLTSRSSEVDTPATPWQADWFAAVAFMASGMDSAAASEMLQVLHRQIFRAAFLLPLAGKRYAS-KAARDTAGCTAAARDP--PAHVAQEMNSGGHTHEVADVYSRVCASP-------LSGDGAPPAAADPSRGDPPLLLLISLVEELLEEELPLMSAALRGSGWAAAPLAARWVRQCMLSIVDWPGVVAFLALSLLRGHDYQVYFVVALFRAAQPCVMEAASKGLDLTGLLGRGEALEAFNLEESLSFMEALERRHRGRCIAATKAYLA 1646          
BLAST of mRNA_P-littoralis_Contig60.109.2 vs. uniprot
Match: D8LGY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY7_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 6.640e-129
Identity = 262/422 (62.09%), Postives = 293/422 (69.43%), Query Frame = 2
Query:   47 MDPAQDGAVSHVSELLEIIRRAGGEDVCEDDVGNLVESLPRTNPDFEACRLRSMLCDQLEARLGAAVDEALVSDDLEVSSSGGVCPKDIDEVVARLVDSSRFVGVVENARATVVQQVAGVQKVASGATNTTAAVAGNSSTILNAATGNFLRRNLDALLSSSDAEGEGTRHVKKKAARRDDWVGIFDLSGGFGAGGGGFSPRVDIEGALGQLEAGLESSVPGSATSAVEALGLLAEADPELFQFGNHWPLFLELARRALDSADPAVHAKGMTLHWVMYEKSMGMCAADMCEGVLAHARGYFSTTVHVLSAPPT--QHSTAXXXXXXXXXXXXXXXXGDAAAAGLMVVGDSKLACAAREARALHGMLMTIHETFQHLPERRVWSIVSSFFSLFGDAIASLEEVHGNST-------AWDRASGDP 1285
            MD  QD AV+   E L+I+ +A  E          V SLP+T+ DFE C LRS LC QL+A+LGAAVD+AL S +L +  + GVCP  I++VVARL  S  FVGVV  AR  + +Q A  Q  A  AT   A   G+S     AA G  LRRN+DAL SSSD E E  R VKKKAARRDDWVGIFDLSGG GAGGG  SPRVDIE ALGQLE GL  S   S TS+VEALGLLA+A+PELFQFGNHWPLFL+LA+RALDS DP VHAK MTLHWVMYEKSMGMCAADMCEGVLAHARGYFS T+HVLSAP    +H  A                 D   A LMV+GDSKLACAAR +RALHGML+TIHETFQHLPERRVWSIVSSFFSL GD +ASLE   G+ T       A D + GDP
Sbjct:    1 MDEVQDDAVT---EFLKILGKAEHE----------VRSLPQTSADFETCSLRSTLCGQLDAQLGAAVDKALGSQELRLDPADGVCPDGINKVVARLAASPPFVGVVNKAREAI-EQAAEAQLAA--ATTPVANATGDSVAATGAA-GVVLRRNVDAL-SSSDTEREDMR-VKKKAARRDDWVGIFDLSGGLGAGGG-ISPRVDIEAALGQLETGLGGS-GSSTTSSVEALGLLAQANPELFQFGNHWPLFLKLAKRALDSPDPTVHAKAMTLHWVMYEKSMGMCAADMCEGVLAHARGYFSNTIHVLSAPSAHRRHMLAGGKGAETA---------DVGTANLMVIGDSKLACAARMSRALHGMLVTIHETFQHLPERRVWSIVSSFFSLLGDTVASLEGAPGDPTGDGAPPTAADPSRGDP 392          
BLAST of mRNA_P-littoralis_Contig60.109.2 vs. uniprot
Match: UPI00087079F2 (uncharacterized protein LOC108864690 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00087079F2)

HSP 1 Score: 60.5 bits (145), Expect = 3.920e-5
Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 2
Query: 4910 ELPLMSAALRSAGWAAAPLAARWMRQSMLCVVDWPGVVAYLALALLRGHDYQVYFVVALFRTAQPRVVEAASRGVDLMALLGRGEALEGFQLEDSLSFMEELERRHR 5230
            ELP +  ALR A +    LA+ W+ Q++  V+D   +   LA+ L+ G DY VY+ VA+ R  +P V+  +  G   +AL  R E +  F+  +SL F  +L + +R
Sbjct:  886 ELPKVHFALRRANFLLRNLASFWVGQNLWNVIDLDEIATILAVCLVHGSDYLVYYCVAILRHIEPEVIRLSLEGN--LALNVRLEPVLDFKASESLEFCHQLRKVYR 990          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.109.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJF3_9PHAE0.000e+055.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY7_ECTSI6.640e-12962.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00087079F23.920e-534.58uncharacterized protein LOC108864690 n=1 Tax=Galen... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:491662..502606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog885580.XP_010636555.1
Preferred nameTBC1D32
PFAMsBROMI
Model size5574
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0001654,GO:0002088,GO:0003002,GO:0003406,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009888,GO:0009953,GO:0009987,GO:0016043,GO:0021532,GO:0021904,GO:0021915,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030326,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035295,GO:0042733,GO:0043009,GO:0043010,GO:0044085,GO:0044782,GO:0048513,GO:0048598,GO:0048731,GO:0048736,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051641,GO:0051716,GO:0060041,GO:0060173,GO:0060271,GO:0060429,GO:0060831,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0072359,GO:0120031,GO:0120036,GO:1905515
Exons5
Evalue5.82e-13
EggNOG OGs2C77R@1|root,2QR93@2759|Eukaryota,38C3V@33154|Opisthokonta,3BB2Y@33208|Metazoa,3CSD8@33213|Bilateria,4833P@7711|Chordata,48ZSI@7742|Vertebrata,3J716@40674|Mammalia,35ED4@314146|Euarchontoglires,4Q3VA@9989|Rodentia
Ec32 ortholog descriptionUncharacterised protein family UPF0183
Ec32 orthologEc-14_001430.1
DescriptionProtein broad-minded isoform X1
Cds size5226
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.109.2prot_P-littoralis_Contig60.109.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig60 491964..502560 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791251.302316-UTR-P-littoralis_Contig60:491661..4919631680791251.302316-UTR-P-littoralis_Contig60:491661..491963Pylaiella littoralis U1_48UTRP-littoralis_Contig60 491662..491963 -
1680791251.3856645-UTR-P-littoralis_Contig60:502560..5026061680791251.3856645-UTR-P-littoralis_Contig60:502560..502606Pylaiella littoralis U1_48UTRP-littoralis_Contig60 502561..502606 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791251.3187435-CDS-P-littoralis_Contig60:491963..4921701680791251.3187435-CDS-P-littoralis_Contig60:491963..492170Pylaiella littoralis U1_48CDSP-littoralis_Contig60 491964..492170 -
1680791251.33409-CDS-P-littoralis_Contig60:493035..4969501680791251.33409-CDS-P-littoralis_Contig60:493035..496950Pylaiella littoralis U1_48CDSP-littoralis_Contig60 493036..496950 -
1680791251.3460026-CDS-P-littoralis_Contig60:497351..4976511680791251.3460026-CDS-P-littoralis_Contig60:497351..497651Pylaiella littoralis U1_48CDSP-littoralis_Contig60 497352..497651 -
1680791251.3610678-CDS-P-littoralis_Contig60:498142..4982411680791251.3610678-CDS-P-littoralis_Contig60:498142..498241Pylaiella littoralis U1_48CDSP-littoralis_Contig60 498143..498241 -
1680791251.3737936-CDS-P-littoralis_Contig60:501855..5025601680791251.3737936-CDS-P-littoralis_Contig60:501855..502560Pylaiella littoralis U1_48CDSP-littoralis_Contig60 501856..502560 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig60.109.2

>prot_P-littoralis_Contig60.109.2 ID=prot_P-littoralis_Contig60.109.2|Name=mRNA_P-littoralis_Contig60.109.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1742bp
MDPAQDGAVSHVSELLEIIRRAGGEDVCEDDVGNLVESLPRTNPDFEACR
LRSMLCDQLEARLGAAVDEALVSDDLEVSSSGGVCPKDIDEVVARLVDSS
RFVGVVENARATVVQQVAGVQKVASGATNTTAAVAGNSSTILNAATGNFL
RRNLDALLSSSDAEGEGTRHVKKKAARRDDWVGIFDLSGGFGAGGGGFSP
RVDIEGALGQLEAGLESSVPGSATSAVEALGLLAEADPELFQFGNHWPLF
LELARRALDSADPAVHAKGMTLHWVMYEKSMGMCAADMCEGVLAHARGYF
STTVHVLSAPPTQHSTAAAGGGGGGGGRKGSGDGDAAAAGLMVVGDSKLA
CAAREARALHGMLMTIHETFQHLPERRVWSIVSSFFSLFGDAIASLEEVH
GNSTAWDRASGDPAAGGEEKDVDRSGSGSRGGCSAVPLGDDQSSPLSGRG
GSPSSTVLLPAHFLAVAGRVDEWLPGWLRSLPTGRLVRAVNDAGLLGEMA
RRCTLLGHIPFHGLNRGSNPKVPPAAAAAAAAAAANGTDATVPSCVPASE
PSDVCLPTAALVRHRLGLSAGSSSAGAFCSMGSAAPLGRALWLSAAELER
SLVLQSVSFLGIVTTHCRGILRPCPPPPSDDHDDGSEDRALPAGTTESEA
GDGGIDRGLEQGTRVVRALVQCARRRETCRAERNGMKKSRSARRQRLPVD
GARSGSVSCVALGYVLKLAKATAGGESTPFTPSAVDCLFSPLGGGAQSDL
RGRDGSAGERDGGGRGDDGCGRESGRLLVDEPPAFLGALAEIAGVLLSSR
GSSAGFFVEGPEGPQASRALLELVRCAAELARRVCRHGGRAGEKPGSEML
PGGHADATECRPPSREEEREDSERLAVDFACALAPIMGNPPKQRAAGWTA
LWQAGVPYALARLVEHLDHHGLDRAAFGTASQRPTSDRDAAPSPRGSGDG
GGGGDGGDGHDRYSAKQNGHLRDRLLLSLAEWARDLAGVQYLRRVGLAGP
CGSILSRELGRRRLNRSTRKECADPRPLALAMRLALYAEGLSALLSADGG
VVNAVSGGLNRLGESLTLPELLQSHVVGLPPPHALAARSNSGHDGGVGGF
TGRAGVGSSAVLELCSDAGDLRCLEFICRMSLVGEFSLGSDACTAGQMKQ
WLRWGLVRAVAPIGESWLDAGEAVADEVDSYVSEDVRVVALQLVTNLASD
LSTAVAIEAEWSLSELLARQMGAEGEPAGGVRTSDDAVVGGEAAGRVATK
EGVGSDGGSTFDAGSIVCVPDIVEPAALGRARLAVSLTCLGGPNEERHEL
LRRLREAEASVAVGATVASGLKNVAAASARRTASGARNKVSVKGVEFPID
SALDEAWWVAAGRCVLKVVRCLSGSRGSRSAEAFALLRNGAARRSPLWPK
EATACSAAQRAVMDSAYPRSSGDMRCSSLEGDWPVKRDEVMSKLCFSYAR
SLGFVDDDGDQDRFGAGLKDTMAAAAGLTANSTPEPPDCDWFAAVAFIAS
GMDSAAASGLLQDLHRHIPRALFVLPLAGKRYAEWVVALETAVSASVPGE
STLPAASEEELSFAGATGDLADETAGINREPRAVRSPSVGGGSAAAAADS
SCRSPPPLLLLVALVEEVLEEELPLMSAALRSAGWAAAPLAARWMRQSML
CVVDWPGVVAYLALALLRGHDYQVYFVVALFRTAQPRVVEAASRGVDLMA
LLGRGEALEGFQLEDSLSFMEELERRHRPRCLASTRGYFAR*
back to top

mRNA from alignment at P-littoralis_Contig60:491662..502606-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig60.109.2 ID=mRNA_P-littoralis_Contig60.109.2|Name=mRNA_P-littoralis_Contig60.109.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10945bp|location=Sequence derived from alignment at P-littoralis_Contig60:491662..502606- (Pylaiella littoralis U1_48)
GCAAAGCATTGCCAGGCAGGAACCTCGCTGCCCACAGAGCCCCCCAATGG ATCCAGCACAAGATGGTGCGGTATCTCATGTGTCTGAGCTACTCGAAATC ATTCGCCGCGCTGGAGGTGAAGATGTATGCGAGGACGACGTCGGAAATCT AGTCGAGTCGTTGCCTCGAACGAACCCTGATTTCGAAGCATGCAGGCTGC GCTCGATGCTCTGCGATCAGCTGGAGGCGCGCCTAGGGGCCGCAGTGGAC GAAGCGCTCGTTTCCGACGATCTTGAGGTTAGTTCATCTGGTGGCGTTTG TCCCAAGGACATCGATGAGGTTGTAGCTCGACTGGTGGACTCTTCACGTT TCGTCGGCGTGGTGGAAAACGCTCGTGCGACAGTAGTCCAGCAAGTTGCG GGGGTACAAAAGGTGGCTTCTGGTGCCACCAATACCACTGCTGCCGTTGC GGGCAACAGCAGCACTATCCTGAATGCCGCAACGGGCAACTTTCTTCGCC GAAACTTGGATGCACTGCTGTCCAGCTCCGACGCGGAAGGAGAAGGCACG CGGCACGTTAAGAAGAAGGCTGCGCGCAGGGATGATTGGGTGGGTATCTT TGACCTTAGCGGAGGATTTGGGGCAGGCGGCGGAGGATTTAGCCCTCGCG TGGATATCGAGGGTGCGCTGGGCCAGTTGGAAGCCGGGCTCGAGAGCTCA GTCCCTGGCTCTGCAACAAGTGCGGTCGAGGCTCTGGGCTTGCTTGCAGA GGTGAAGGACGAAGCGAAGCGACAGCTTATGAATGTATCTTTGTTGCATG TTGCATGTGTAGTTGGAGATACCAATGCACCTTTGTTCGACTCTCTTCGT TCGCTCTTGTATGCATGCACAAGTGGTGTGTAGGACGACCACCGTTTGAA TCCACGCTGGCGGCTGTGGGGCAGGCGACTCTCTTCGTTCGCTCTTGTAT GCATGCACAAGTGGTGTGTAGGACGGCCACCGTTTGAATCCACTCTTGCC AGCTGACTGGCGGCTGTGGGGCAGGCAACCAGCAACACGGCGAGGTTCTT TCACAACCCGCCTGTGGCTTCTGTGGAAATTAGAAATTGGGCTACAGGAT ATCTTACAATACGAAGATACCGATATTTTTGTAGAGCCTTTCGAACAACA ATATTGCCCACAGGACTTTTTGAAGACCCGATCTCACGTGATCAGAGGTC GGACACCAGGACCTTATCCAATTTTGCTGAATTTTGGATTTTGGAATCCT GCAAAGTGCACGTAAAACGTGACGAAACAGGGCCATCAGACCAGTTGAAA CGGGCTTGGGGCCGAAACAACGACTGGGAGGTGGGGGTTGGGGCGTTATC GCGACACTAATGTTGTGATTCAGAACTCCGTATTGATTTCGCGAACTCTA AATCCGAGATGATGAGCTCCCTCTACTCGAAATTCAAAACAAAGCGGTGA GCACGAGAGGGCGCTCCAAATGAGACCTGTGGTGTAAGTTAAGCCGACGT AGTGTATGTTGGCTAGCTCAGATCTTCTGCTGGGGCTGTGCCATCTGTGG TTGAAAATATCTTGTCGAGATTCTGTCCGCATCCCAGCCCGAGATCAAAC ACCTTGCGTGATCTTCCACTGCTGTACTCACCGCCATGGGCCACAATCCG GAACTTGGGGTCTACCGCAGTAGCTCCCACCACTTGCTGCCTAGGACAAC GCTCAGTTCAGGAAATTGGGGCGCATGGCCGCGAGTACAGCAGTGGAAGA TCATGTAAAATGTTTGGTTTCGGGCTGAGATGCGGACGGTTTTTGGGCTG CCGCACCACATACCTTCGACCACCGATATTTCAGCCCCATCAGAAGCTCT GAGATTGCCAACACGCACGTCGCCTCTACATGATGTCTTCTACAGTACTG ATATCATTGGAGACGTCGGCTGAATTCGCGCGGGAAGGTCGATTTCTATC ATTGGTGATTTTTGTACTGGATAAAGACTGGATATTTTTGTTGAATTCTA CCAGGTTGAGAGGGGTCCCTTAAAAAAAACTTCCAAAAATCCTCCCCTGT TCTGTATTGAATGGCCGTTTGATGGTTGATTTTCATTTTACCCTGTAACC GCTTCGCCCGTTCGTTCAGCACTCTCGACCGAATGAAGCCATAGCGATGC TGAAGTCATGCCTCGCGAGCTGTGTACATCATCCTTCTCGCGCGGTGGTC ATCTGAGGCCGCGAAGCATCGAAAGGCTGACCAAGAAAGTTTGCAGACAT CGATGAAGTGTGGAAGAAAACAAATGATATTTTTTTCCACGTCATCGGTT CCTGCAAACCTTCTTCGCCAGCCCATCGATGCCTCGCGGCTTCAAATGAA CACCGCAGGAGAAGGATGATGTACACAGCTCGCGAGGCATGGCTTCAGCA TTACTGTGGCCAAATTTGTTCGAGAGCTATGGACAAAATACTAAACTGGT GTGGCGGCGAAAATACCTGCGGCAGCGACGATAGCTGCTGCTTGCTGCTG TGTTCAAGGGTTCAGAGCAGCAGCCGCTGCCAGCTCTCTTCCGAACCATT TCGGTTTTTTGTCCATCGCTCTCGAACGAAAGAAGCCACAGCAATACAAG AACCATCGCCCGCGAGCTGTGTTTATGTTCCTTCTCCTGCGGTGGTCATC AGAGGCCGCGAGGTATCGATGGGCTTACAAAAAAGAATGTAGGTCATCTC ATCGTGAAAGGCTGGCTGACGTGGGGTGTTCACACTCCTTGCCTAAAAAA ACCCCAACATGTTACCGATAAGTGCAGGCTGTCATGAAAAAACATTCTGA TCGTTTGGGGCGATCGGAAGGACATGTTCGAAAAGTCGATACCTAAAAGG CTGTTTCTGACCACATGAGGTGTGCGATCTTGGACCAATGTTAAAAACGC CATTTGTAGACGACGTTATTCGCACACACGATGTAGCCGTACGCACATAA ATTGTTGTATCGGGGGGGGGGGGAGCTGTCCATTCGGGCTCTCGAGACGG TCGAAAACCCCACGCCGCACCCGCCACGGAAATTAGCGGAGAAGTTGTTC TTCATTTCACGAGGACTGGTGTGCCAGGCCAAGCTTGTTCACCACCTATT TACTACCACCATAGTGCCATACATTCTGAGGTATGTGTGCGCCTGGCCAG TCAGTGGCTCGCGTGCAGCAGCAGCAGCAGCAGCAAAGTCGATCGTTGGG GCCGTGCTGCGGGTTGTTGTTCCATACAAAAAATGCCTCTCATACCCTTC ATTTTTTGCTGTTACTTGTTGCACTGCTGTTTTCCATCCACCTCCAGCAA CCTCTCGCCTCCCACATTCACACACCATCATTCAACCCACTACAGCACAG GCAGAGCCGCAGCAGCAGTCCGCCACACACACAACAACTGCCATGTACAA TAACCAGATGTACACATGAACAGCAAAAATTCGCACACAGCAGCAGCAGC AACCGACTATCGACAGCTTGCTGAGGATACTGCCGTATTTGGGTTCGTGT GCCTGATTGCGGTCCAGCTGAGGGCGAAACTGGAGGGATAAGTAATGTAC ATGGTTCTCCGTAGTGTACGAAGGCCTGCCACTGGGCCCCCGGTACAGGA TGTGAAAAGTAGACAGAAGCAAACTTGCTAGGTCAGGAGCTTCAGTGGGG AGCTTCAGTGAGGATTTACTTCTCATTTTTGCTTGCTGTTGCTGTGTTGA TTTCAGACGGGGGAGTCTGGAGAGGCCTTTGATGACCATCCTTTCCTCCG CGATATTTTAGTCGTGGCAGCGGCATGGCGACACTGGGTAGCCCGTCTTG CTTCTCCAGGGACGTTACCAGCCTGTTGTGAGCCCTTGTTCGGGGCCCTG GGTGTGTGTCTGCCTTTTAGGTGCTCTAATGAACGTTTTCTTTTGGTTTG GTTCCAGCTGCACATTTTTTCTGGTTCTCGAACACTGAAGGGCTGGTTCT GATTTGGAACCGGGCCTATTTGTGTAGCCCGGCCGGAAAAGCCTGGTCCT GGATGCGGTTCACGTGTTGTCGTATTGCCATGAGTGATGCCGGGAGAACA GGAGCCTGCAGCGCGTTTGGTAGTGGCATCACATGACAACCCCAGAACCC GTGCGACTGCTGTTGTACGCACCGCACCTGATCTCTGATCGACGCGCTTG GCCTGAACGTGTGCGGAGCTGACTGGGGATGTTCGTCCTCTTCCCCCTCA CCGCAATCCTGCTGCTTTTCTTTCCAGCTATGATATGCCTATAGACACTT TATGCATGCGTCATATGCGTTTTCTGCAGGCCGTCTTATTGCTTTCCTTC AGGTAACAAGACTATTTTTTTTGTGGTGGCCTTTTTTGGGACTTGCCGTG TGGTTTTCCCTGCAGGCCGACCCCGAGCTGTTTCAATTCGGCAACCACTG GCCTCTATTCCTGGAGCTAGCTCGACGGGCACTGGACAGCGCAGACCCGG CAGTGCATGCCAAGGTGCGGGAGCGACAAGAAAGAGGGAGTGAGGGAGAG AGAGAGAAAGAGAGCAATCGATGTCTGTGCATTGCAGCGAAGGCAGTTTT CGGCCGGGTGGGGGGGAGAGCGGCACGCAAGCGGCTGGGGAAGAGGTGTA CTAGTATTAAGGTTGTGTGTGCGTTACGTGCCCGCCGGGGTTGGTGTGTA GGCACTTGGCCTGTGTTTTACGAAGTATCAATCTAGGGGAAACCGGGCTC ATAGTCTCGCGTACGCACGATCAGCACCCGCTTCTCGCACAATCATGCGT ACCGGTATTTTCCTTTCGGCACGCCTACATACCCGGGTCTCGTTCTTGCG CTAGAGATGCCATACGAGAGAGCGCCACCGCCCTCCACCCCCTCTACACT ACTCCTTTTCCTCGGCCACTCTCGGTTCCACGCAAGGCAACATTGATCGG ACGCATGATGACACCGTACGAAAACGTTGCCGCCGTCGTGCTTTCCCGCG CGCAGGGCATGACCTTGCACTGGGTCATGTACGAGAAGTCCATGGGGATG TGCGCGGCGGACATGTGCGAGGGGGTTCTAGCCCATGCGCGGGGCTACTT TTCGACCACAGTCCACGTGCTGTCCGCCCCTCCAACGCAGCACAGCACCG CCGCAGCCGGCGGCGGCGGCGGCGGCGGCGGAAGAAAGGGCAGTGGTGAT GGTGATGCTGCTGCAGCCGGTCTCATGGTTGTTGGAGATTCCAAGCTGGC TTGCGCGGCTCGTGAGGCCAGGGCCCTTCACGGCATGCTCATGACGATCC ACGAGGTGCGTTTTCCCTTCGTTGCTACTTCAGTGATTGAAGTACATTAT TGTGTATACAACCCTCTTTTTCAGCTTGCTCTCGTGATGCTCCTCGGCGC ATGCGTCAGACACGGAGAACATTTCGTTGCCGAGATTATCGCAATGCTAT GATACTGCTGTCGGTGCGTCGAAGCACGCGACAATTCGGTGGTGGCGGTA ATGCCACTGAGATGGAGCCGATCTAGCTGGTACCTGCTGTTCGTTCGGGG CGCTACCGGTGCTATGCCAGTCTGATTATCTTCCACCGTGTCGTACATAT TATCTGCGGAAAATTAGAACGCAACGGTAACCCGGCAGACCCTGCTCGAC GGTTGTGCGTGCGTCAATACAATCTTAAATGTTTTCACGCACCGTTGTCT GCACAGACTTTTCAGCATCTGCCCGAGAGGCGCGTGTGGAGCATCGTGAG CAGCTTCTTCTCGCTGTTCGGAGATGCCATCGCTTCCTTGGAAGAAGTGC ACGGCAACTCAACGGCATGGGACCGAGCCAGCGGCGACCCTGCTGCCGGT GGGGAGGAGAAGGACGTCGATCGAAGCGGCAGCGGCAGCCGTGGTGGCTG CAGCGCCGTTCCACTTGGGGATGATCAGTCGTCGCCGTTGTCGGGGCGGG GCGGCTCACCATCATCCACGGTGCTCCTTCCGGCACACTTCCTTGCCGTT GCAGGCCGAGTTGACGAGTGGCTTCCGGGTTGGCTGAGGTCACTTCCCAC CGGACGACTCGTGCGTGCGGTCAACGACGCGGGTCTGCTTGGGGAGATGG CCCGCAGGTGCACGCTTCTTGGGCACATTCCTTTCCATGGGCTCAATCGC GGCTCGAACCCCAAAGTGCCCCCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCGAATGGTACGGACGCTACCGTCCCCTCATGCGTACCCGCGTCGG AGCCGTCGGACGTTTGCCTGCCGACGGCTGCGCTAGTGAGGCACCGCCTT GGCTTGAGCGCTGGATCTTCTTCAGCGGGTGCTTTTTGCTCAATGGGTTC GGCTGCCCCTCTGGGTCGCGCCCTGTGGCTTTCCGCCGCGGAGCTTGAGC GGTCGCTTGTCTTGCAGTCAGTTTCCTTTCTCGGAATCGTCACCACGCAC TGTCGAGGAATCTTGCGGCCTTGTCCGCCGCCCCCTTCCGATGACCACGA CGACGGGAGCGAGGACCGGGCGCTGCCGGCAGGAACGACCGAGAGTGAAG CTGGCGACGGCGGGATCGATCGTGGCCTCGAGCAGGGAACGCGAGTCGTT CGGGCGCTGGTGCAGTGCGCGAGGAGACGAGAGACGTGTCGAGCTGAGCG TAACGGGATGAAGAAGTCGCGATCGGCGCGGCGACAGCGGTTGCCGGTCG ACGGCGCAAGGTCAGGGTCAGTAAGTTGCGTGGCGTTGGGCTACGTCTTG AAGCTGGCGAAGGCGACGGCAGGTGGCGAATCTACGCCGTTCACCCCTTC CGCCGTAGATTGTTTGTTTTCACCCTTGGGTGGTGGCGCGCAATCTGATT TGCGGGGGCGAGACGGCAGCGCGGGAGAGAGAGATGGCGGCGGCCGTGGC GATGATGGCTGCGGCAGGGAAAGTGGCAGACTGCTGGTAGATGAGCCCCC CGCATTTCTAGGAGCGCTGGCGGAAATCGCGGGAGTGCTTCTGTCGTCGC GGGGTTCTTCGGCCGGGTTTTTCGTGGAGGGTCCTGAGGGGCCGCAAGCG TCTCGCGCTCTCCTCGAGCTCGTGCGTTGCGCGGCGGAGCTTGCGCGGCG AGTATGCCGCCACGGCGGCCGTGCCGGCGAAAAACCGGGGAGCGAAATGC TGCCGGGCGGGCATGCAGACGCGACGGAGTGCCGCCCTCCGTCACGGGAG GAGGAGCGGGAGGACTCGGAACGACTCGCGGTAGACTTCGCGTGTGCGCT TGCGCCGATCATGGGCAACCCCCCGAAGCAGCGCGCGGCCGGGTGGACAG CGCTGTGGCAGGCCGGTGTGCCGTATGCTCTGGCCAGGCTTGTGGAACAC CTTGACCACCATGGACTCGACAGAGCGGCCTTCGGAACAGCAAGCCAGCG CCCAACCAGTGACAGGGATGCTGCCCCCTCACCCCGAGGCAGCGGTGACG GCGGGGGCGGCGGGGACGGCGGTGACGGCCACGATCGATACTCCGCAAAA CAGAACGGCCACCTTCGCGATCGGTTGTTACTGTCGCTGGCTGAGTGGGC GCGCGACCTCGCGGGTGTCCAGTACCTGCGTCGTGTCGGGCTGGCGGGGC CTTGCGGGTCGATTCTTTCACGCGAGCTGGGGCGGCGACGCCTGAACCGC TCCACGAGGAAGGAGTGCGCGGACCCTCGACCGCTCGCCCTTGCGATGAG GCTCGCTTTGTACGCGGAGGGCCTGAGTGCACTCCTGTCCGCGGACGGCG GGGTTGTGAACGCAGTGAGTGGAGGGTTGAACCGCCTCGGTGAGTCGTTG ACCCTCCCAGAGCTGTTGCAGTCTCACGTGGTGGGCCTGCCGCCACCCCA TGCCCTTGCTGCACGAAGCAACAGCGGTCACGATGGCGGCGTTGGTGGGT TTACGGGGCGGGCGGGGGTTGGGAGTTCGGCAGTGCTGGAGCTTTGTAGC GACGCTGGCGACCTGCGATGTCTGGAGTTCATTTGCCGCATGTCGCTTGT GGGCGAGTTTTCTTTAGGTTCAGACGCCTGTACCGCCGGGCAGATGAAGC AGTGGCTACGTTGGGGGCTGGTGCGGGCGGTGGCGCCGATTGGAGAATCC TGGCTAGACGCCGGCGAGGCTGTGGCGGACGAGGTGGACAGCTATGTTTC TGAAGATGTGCGCGTGGTGGCCCTTCAGCTTGTGACGAACCTTGCGTCAG ATTTGTCAACCGCGGTCGCGATAGAAGCGGAGTGGTCACTCTCCGAGCTT CTCGCCCGGCAAATGGGTGCTGAAGGTGAACCGGCAGGCGGCGTGCGTAC GTCGGACGATGCCGTTGTCGGGGGCGAGGCGGCTGGGAGAGTAGCAACCA AAGAAGGCGTCGGTTCCGATGGCGGCAGTACGTTCGACGCGGGAAGCATC GTCTGCGTGCCCGACATCGTGGAGCCTGCTGCGCTCGGCCGCGCCCGCCT GGCGGTCTCACTGACGTGCCTGGGCGGCCCCAACGAGGAGCGACACGAGC TTCTGCGAAGGCTCCGAGAGGCCGAAGCGTCGGTCGCTGTCGGTGCGACC GTTGCCTCTGGGCTGAAGAACGTAGCTGCTGCCAGTGCCCGGAGGACTGC GAGCGGTGCCCGCAACAAAGTATCGGTTAAGGGAGTTGAGTTTCCAATCG ATAGCGCCTTGGATGAAGCGTGGTGGGTTGCGGCGGGCCGGTGCGTGCTG AAGGTGGTGAGATGTTTGTCTGGTTCTCGGGGATCTCGAAGCGCGGAGGC GTTCGCGCTACTAAGGAACGGGGCGGCGAGAAGATCCCCTCTGTGGCCAA AGGAAGCTACGGCGTGTTCGGCTGCCCAACGTGCAGTGATGGACAGCGCT TACCCCCGTAGCAGCGGTGACATGCGTTGCTCTTCGTTAGAGGGAGACTG GCCCGTCAAAAGGGATGAGGTTATGAGTAAACTTTGTTTTTCGTACGCGC GCAGCCTCGGTTTTGTAGACGATGACGGCGACCAAGACCGGTTCGGAGCC GGGCTGAAGGATACCATGGCAGCTGCAGCGGGATTGACCGCCAACTCTAC GCCCGAGCCACCCGACTGTGACTGGTTTGCAGCAGTAGCGTTCATAGCCT CCGGCATGGACAGCGCAGCAGCAAGTGGGTTGCTGCAGGATCTGCACCGG CATATCCCCAGAGCTCTGTTCGTGCTGCCGCTGGCGGGGAAACGATACGC GGAGTGGGTAGTGGCGCTCGAAACCGCCGTGAGCGCTTCAGTCCCAGGGG AATCCACACTCCCGGCCGCCTCCGAGGAGGAGCTTTCTTTTGCCGGAGCT ACGGGAGACTTGGCCGACGAGACGGCAGGAATCAACCGCGAACCCCGTGC CGTGCGCTCTCCTTCTGTGGGCGGCGGCAGCGCTGCGGCGGCCGCTGATT CTTCCTGCCGAAGCCCGCCGCCCCTGCTGCTGCTGGTGGCTTTGGTCGAG GAGGTGCTGGAGGAGGAGCTGCCTCTGATGTCGGCGGCGTTGAGGAGCGC CGGATGGGCGGCTGCTCCTCTCGCGGCGCGGTGGATGCGTCAGAGTATGC TGTGTGTGGTGGACTGGCCTGGAGTGGTGGCGTACCTCGCGCTCGCCCTG CTCCGGGGTCACGACTATCAGGTGCGTGTGGGACAACCGTCCGCTGCTTG TATCATTCATGCCGTTTGCGTGGTTGATCCAGAGCTCTCTCTAGCGGTGG ACGCCGAGGGCGACCTAAATTGCTGGTAAACTAGTGCTTCGAAGTACCTC TTTTTTTTTTCTGTGTGTTGTTTCCGCCACTCTGAGAAACCACTCGGAAA CCACTTTATAATTACCGCCAGCATCGAGCCCTCCCACCCGCCCGTGGTTC CATCGCCGGGAAGTACCTTCGCCGTTCGAAATGTGCATGACTGTCGTGCG CGACGCCCGCGGCTAGGCTTGAGAGGAAGAACGGTAGCCCCTATTTGCAG TTTTAAACTGCAAATAGTACCGTGCAGGTTAACTGTCTGATTGACCAAAG GCCAACGGCTGCTTTTTTCAAGAACGCCAAGGGAACGCACGGCTTCGCCG CGCAGAGGCCCCTTTCGCACCCGATCACCCCAGAGGTCGGGCGTGTGGGT TAGGGTTAGGGTTAGGGCTAGGTTGGTCAGGAGCGGCATAGATCATAAAG AGTGTTATCAAGTGTGCCTGCAAATATAATTTGCCGTTTAAAACTGCAAA TAGGGGATACCGAGGAAGAACCCTCTTCGCGTGTTGTGTTCAGACACGGC AACCCCACTCCCAGTGGAGTACTCTATTGTCATACTTCGAGTCGTTCATT GAGCGGCTGCAAACAATGCGCTGAAAAATATTCTGGTCGCGCAGTGCGCC ACAACAGTACTTCGAGCGCGCTACATTTACACAGGTTTTTTTCGCCTCCC ACCTTCCTAGCCAAAATTAACATATCACGTAAAAGTGCTCGCTAATTTGC TCCCCCCTGTATCCAACTTGCTTTACACCCAACCAGGTGTACTTTGTAGT CGCTCTCTTCCGCACAGCCCAGCCCCGTGTTGTGGAAGCGGCGTCGCGGG GAGTCGACCTCATGGCGCTGCTCGGTAGGGGAGAAGCTCTAGAGGGTTTC CAACTGGAAGACTCTCTTTCTTTCATGGAGGAGTTGGAGCGGCGTCACCG CCCCCGTTGCCTTGCTTCAACCCGCGGGTATTTCGCTCGGTAGGAGGGAG GGAGTTTCAGTTTACCCCGTCCGCCAACTGCCTTAACACTTTGGTTTCGT GCCCGTAAGCGTTGGGCCTCTTGTCCTCTCGGTGATAGGACTGCTGGTCG CGGTGATGGTGCTCGGTACTCTAGGCTTTCTTGCGCGTTGGGTAGGGGTG CAAACGTTGTGCTGTCTTTTGCGGCTGCACGCAGGCCGGCTTCGTGATGC AGGATTTCACGTCTGTTACGCATGTGTGTGTTCGGGAAAGTGGGGTGTGT TTTATCGCATAGTACTTCGTATATGATACGGTAGCGAGGGAGAAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig60:491662..502606-

>mRNA_P-littoralis_Contig60.109.2 ID=mRNA_P-littoralis_Contig60.109.2|Name=mRNA_P-littoralis_Contig60.109.2|organism=Pylaiella littoralis U1_48|type=CDS|length=5226bp|location=Sequence derived from alignment at P-littoralis_Contig60:491662..502606- (Pylaiella littoralis U1_48)
ATGGATCCAGCACAAGATGGTGCGGTATCTCATGTGTCTGAGCTACTCGA
AATCATTCGCCGCGCTGGAGGTGAAGATGTATGCGAGGACGACGTCGGAA
ATCTAGTCGAGTCGTTGCCTCGAACGAACCCTGATTTCGAAGCATGCAGG
CTGCGCTCGATGCTCTGCGATCAGCTGGAGGCGCGCCTAGGGGCCGCAGT
GGACGAAGCGCTCGTTTCCGACGATCTTGAGGTTAGTTCATCTGGTGGCG
TTTGTCCCAAGGACATCGATGAGGTTGTAGCTCGACTGGTGGACTCTTCA
CGTTTCGTCGGCGTGGTGGAAAACGCTCGTGCGACAGTAGTCCAGCAAGT
TGCGGGGGTACAAAAGGTGGCTTCTGGTGCCACCAATACCACTGCTGCCG
TTGCGGGCAACAGCAGCACTATCCTGAATGCCGCAACGGGCAACTTTCTT
CGCCGAAACTTGGATGCACTGCTGTCCAGCTCCGACGCGGAAGGAGAAGG
CACGCGGCACGTTAAGAAGAAGGCTGCGCGCAGGGATGATTGGGTGGGTA
TCTTTGACCTTAGCGGAGGATTTGGGGCAGGCGGCGGAGGATTTAGCCCT
CGCGTGGATATCGAGGGTGCGCTGGGCCAGTTGGAAGCCGGGCTCGAGAG
CTCAGTCCCTGGCTCTGCAACAAGTGCGGTCGAGGCTCTGGGCTTGCTTG
CAGAGGCCGACCCCGAGCTGTTTCAATTCGGCAACCACTGGCCTCTATTC
CTGGAGCTAGCTCGACGGGCACTGGACAGCGCAGACCCGGCAGTGCATGC
CAAGGGCATGACCTTGCACTGGGTCATGTACGAGAAGTCCATGGGGATGT
GCGCGGCGGACATGTGCGAGGGGGTTCTAGCCCATGCGCGGGGCTACTTT
TCGACCACAGTCCACGTGCTGTCCGCCCCTCCAACGCAGCACAGCACCGC
CGCAGCCGGCGGCGGCGGCGGCGGCGGCGGAAGAAAGGGCAGTGGTGATG
GTGATGCTGCTGCAGCCGGTCTCATGGTTGTTGGAGATTCCAAGCTGGCT
TGCGCGGCTCGTGAGGCCAGGGCCCTTCACGGCATGCTCATGACGATCCA
CGAGACTTTTCAGCATCTGCCCGAGAGGCGCGTGTGGAGCATCGTGAGCA
GCTTCTTCTCGCTGTTCGGAGATGCCATCGCTTCCTTGGAAGAAGTGCAC
GGCAACTCAACGGCATGGGACCGAGCCAGCGGCGACCCTGCTGCCGGTGG
GGAGGAGAAGGACGTCGATCGAAGCGGCAGCGGCAGCCGTGGTGGCTGCA
GCGCCGTTCCACTTGGGGATGATCAGTCGTCGCCGTTGTCGGGGCGGGGC
GGCTCACCATCATCCACGGTGCTCCTTCCGGCACACTTCCTTGCCGTTGC
AGGCCGAGTTGACGAGTGGCTTCCGGGTTGGCTGAGGTCACTTCCCACCG
GACGACTCGTGCGTGCGGTCAACGACGCGGGTCTGCTTGGGGAGATGGCC
CGCAGGTGCACGCTTCTTGGGCACATTCCTTTCCATGGGCTCAATCGCGG
CTCGAACCCCAAAGTGCCCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCGAATGGTACGGACGCTACCGTCCCCTCATGCGTACCCGCGTCGGAG
CCGTCGGACGTTTGCCTGCCGACGGCTGCGCTAGTGAGGCACCGCCTTGG
CTTGAGCGCTGGATCTTCTTCAGCGGGTGCTTTTTGCTCAATGGGTTCGG
CTGCCCCTCTGGGTCGCGCCCTGTGGCTTTCCGCCGCGGAGCTTGAGCGG
TCGCTTGTCTTGCAGTCAGTTTCCTTTCTCGGAATCGTCACCACGCACTG
TCGAGGAATCTTGCGGCCTTGTCCGCCGCCCCCTTCCGATGACCACGACG
ACGGGAGCGAGGACCGGGCGCTGCCGGCAGGAACGACCGAGAGTGAAGCT
GGCGACGGCGGGATCGATCGTGGCCTCGAGCAGGGAACGCGAGTCGTTCG
GGCGCTGGTGCAGTGCGCGAGGAGACGAGAGACGTGTCGAGCTGAGCGTA
ACGGGATGAAGAAGTCGCGATCGGCGCGGCGACAGCGGTTGCCGGTCGAC
GGCGCAAGGTCAGGGTCAGTAAGTTGCGTGGCGTTGGGCTACGTCTTGAA
GCTGGCGAAGGCGACGGCAGGTGGCGAATCTACGCCGTTCACCCCTTCCG
CCGTAGATTGTTTGTTTTCACCCTTGGGTGGTGGCGCGCAATCTGATTTG
CGGGGGCGAGACGGCAGCGCGGGAGAGAGAGATGGCGGCGGCCGTGGCGA
TGATGGCTGCGGCAGGGAAAGTGGCAGACTGCTGGTAGATGAGCCCCCCG
CATTTCTAGGAGCGCTGGCGGAAATCGCGGGAGTGCTTCTGTCGTCGCGG
GGTTCTTCGGCCGGGTTTTTCGTGGAGGGTCCTGAGGGGCCGCAAGCGTC
TCGCGCTCTCCTCGAGCTCGTGCGTTGCGCGGCGGAGCTTGCGCGGCGAG
TATGCCGCCACGGCGGCCGTGCCGGCGAAAAACCGGGGAGCGAAATGCTG
CCGGGCGGGCATGCAGACGCGACGGAGTGCCGCCCTCCGTCACGGGAGGA
GGAGCGGGAGGACTCGGAACGACTCGCGGTAGACTTCGCGTGTGCGCTTG
CGCCGATCATGGGCAACCCCCCGAAGCAGCGCGCGGCCGGGTGGACAGCG
CTGTGGCAGGCCGGTGTGCCGTATGCTCTGGCCAGGCTTGTGGAACACCT
TGACCACCATGGACTCGACAGAGCGGCCTTCGGAACAGCAAGCCAGCGCC
CAACCAGTGACAGGGATGCTGCCCCCTCACCCCGAGGCAGCGGTGACGGC
GGGGGCGGCGGGGACGGCGGTGACGGCCACGATCGATACTCCGCAAAACA
GAACGGCCACCTTCGCGATCGGTTGTTACTGTCGCTGGCTGAGTGGGCGC
GCGACCTCGCGGGTGTCCAGTACCTGCGTCGTGTCGGGCTGGCGGGGCCT
TGCGGGTCGATTCTTTCACGCGAGCTGGGGCGGCGACGCCTGAACCGCTC
CACGAGGAAGGAGTGCGCGGACCCTCGACCGCTCGCCCTTGCGATGAGGC
TCGCTTTGTACGCGGAGGGCCTGAGTGCACTCCTGTCCGCGGACGGCGGG
GTTGTGAACGCAGTGAGTGGAGGGTTGAACCGCCTCGGTGAGTCGTTGAC
CCTCCCAGAGCTGTTGCAGTCTCACGTGGTGGGCCTGCCGCCACCCCATG
CCCTTGCTGCACGAAGCAACAGCGGTCACGATGGCGGCGTTGGTGGGTTT
ACGGGGCGGGCGGGGGTTGGGAGTTCGGCAGTGCTGGAGCTTTGTAGCGA
CGCTGGCGACCTGCGATGTCTGGAGTTCATTTGCCGCATGTCGCTTGTGG
GCGAGTTTTCTTTAGGTTCAGACGCCTGTACCGCCGGGCAGATGAAGCAG
TGGCTACGTTGGGGGCTGGTGCGGGCGGTGGCGCCGATTGGAGAATCCTG
GCTAGACGCCGGCGAGGCTGTGGCGGACGAGGTGGACAGCTATGTTTCTG
AAGATGTGCGCGTGGTGGCCCTTCAGCTTGTGACGAACCTTGCGTCAGAT
TTGTCAACCGCGGTCGCGATAGAAGCGGAGTGGTCACTCTCCGAGCTTCT
CGCCCGGCAAATGGGTGCTGAAGGTGAACCGGCAGGCGGCGTGCGTACGT
CGGACGATGCCGTTGTCGGGGGCGAGGCGGCTGGGAGAGTAGCAACCAAA
GAAGGCGTCGGTTCCGATGGCGGCAGTACGTTCGACGCGGGAAGCATCGT
CTGCGTGCCCGACATCGTGGAGCCTGCTGCGCTCGGCCGCGCCCGCCTGG
CGGTCTCACTGACGTGCCTGGGCGGCCCCAACGAGGAGCGACACGAGCTT
CTGCGAAGGCTCCGAGAGGCCGAAGCGTCGGTCGCTGTCGGTGCGACCGT
TGCCTCTGGGCTGAAGAACGTAGCTGCTGCCAGTGCCCGGAGGACTGCGA
GCGGTGCCCGCAACAAAGTATCGGTTAAGGGAGTTGAGTTTCCAATCGAT
AGCGCCTTGGATGAAGCGTGGTGGGTTGCGGCGGGCCGGTGCGTGCTGAA
GGTGGTGAGATGTTTGTCTGGTTCTCGGGGATCTCGAAGCGCGGAGGCGT
TCGCGCTACTAAGGAACGGGGCGGCGAGAAGATCCCCTCTGTGGCCAAAG
GAAGCTACGGCGTGTTCGGCTGCCCAACGTGCAGTGATGGACAGCGCTTA
CCCCCGTAGCAGCGGTGACATGCGTTGCTCTTCGTTAGAGGGAGACTGGC
CCGTCAAAAGGGATGAGGTTATGAGTAAACTTTGTTTTTCGTACGCGCGC
AGCCTCGGTTTTGTAGACGATGACGGCGACCAAGACCGGTTCGGAGCCGG
GCTGAAGGATACCATGGCAGCTGCAGCGGGATTGACCGCCAACTCTACGC
CCGAGCCACCCGACTGTGACTGGTTTGCAGCAGTAGCGTTCATAGCCTCC
GGCATGGACAGCGCAGCAGCAAGTGGGTTGCTGCAGGATCTGCACCGGCA
TATCCCCAGAGCTCTGTTCGTGCTGCCGCTGGCGGGGAAACGATACGCGG
AGTGGGTAGTGGCGCTCGAAACCGCCGTGAGCGCTTCAGTCCCAGGGGAA
TCCACACTCCCGGCCGCCTCCGAGGAGGAGCTTTCTTTTGCCGGAGCTAC
GGGAGACTTGGCCGACGAGACGGCAGGAATCAACCGCGAACCCCGTGCCG
TGCGCTCTCCTTCTGTGGGCGGCGGCAGCGCTGCGGCGGCCGCTGATTCT
TCCTGCCGAAGCCCGCCGCCCCTGCTGCTGCTGGTGGCTTTGGTCGAGGA
GGTGCTGGAGGAGGAGCTGCCTCTGATGTCGGCGGCGTTGAGGAGCGCCG
GATGGGCGGCTGCTCCTCTCGCGGCGCGGTGGATGCGTCAGAGTATGCTG
TGTGTGGTGGACTGGCCTGGAGTGGTGGCGTACCTCGCGCTCGCCCTGCT
CCGGGGTCACGACTATCAGGTGTACTTTGTAGTCGCTCTCTTCCGCACAG
CCCAGCCCCGTGTTGTGGAAGCGGCGTCGCGGGGAGTCGACCTCATGGCG
CTGCTCGGTAGGGGAGAAGCTCTAGAGGGTTTCCAACTGGAAGACTCTCT
TTCTTTCATGGAGGAGTTGGAGCGGCGTCACCGCCCCCGTTGCCTTGCTT
CAACCCGCGGGTATTTCGCTCGGTAG
back to top