mRNA_P-littoralis_Contig6.54.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.300e-59 Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 1
Query: 1 MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVY 342
MI+QLGQPLFWMTINPAD NSP+VM LAGV LDV+S+LK+DLP YVKRLQ IA DPVASA+FFH+ IDAV++TLLRFGAKDGDGGVLGR+KAYVGMTEEQRRLTLHCHLLVWVY
Sbjct: 2767 MIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWVY 2880
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.560e-54 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = 1
Query: 4 IMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
IMQ+GQPLFW+TINPAD NSPIVM+LAGV+LDV S+LK+D P Y +L+ +A DPVASADFFH TIDAVL LLRFGA DGDGGVLGR+K YVGMTEEQ+RLTLHCHLLVWVYG
Sbjct: 561 IMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYG 674
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.600e-54 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = 1
Query: 4 IMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
IMQ+GQPLFW+TINPAD NSPIVM+LAGV+LDV S+LK+D P Y +L+ +A DPVASADFFH TIDAVL LLRFGA DGDGGVLGR+K YVGMTEEQ+RLTLHCHLLVWVYG
Sbjct: 641 IMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYG 754
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 184 bits (468), Expect = 7.990e-52 Identity = 84/114 (73.68%), Postives = 98/114 (85.96%), Query Frame = 1
Query: 4 IMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
IMQ+GQPL WMTINPAD NSPIV+ + GV +DV+SKLK++ PDYV +L+ +A DPVASADFFH TID VL LLRFGA DGDGG+LGR+K YVGMTEEQ+RL LHCHLLVWV+G
Sbjct: 642 IMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFG 755
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 176 bits (447), Expect = 5.410e-49 Identity = 81/114 (71.05%), Postives = 95/114 (83.33%), Query Frame = 1
Query: 4 IMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
++Q+GQPL W+TI+PAD NSPIVM LAGV +DV SKLKSD PDY ++L+ +A DPVASA F+H TI VL LLRFGA DGDGGVLGR+K YVGMTEEQ+RL LH HLLVW+YG
Sbjct: 706 MIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYG 819
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 170 bits (431), Expect = 7.720e-47 Identity = 82/114 (71.93%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 4 IMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
IMQ+GQPL+WMT +PAD NSPIV+ LAGV +DV S+LKSD PDYV+RL+ +A D V SA F+H AVL LRFGA DGDGGVLGR+KA VGMTEEQRRL LHCHLLVWVYG
Sbjct: 650 IMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYG 763
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5KK28_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK28_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.610e-43 Identity = 70/115 (60.87%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 1 MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
M + GQP FWMT+NP+D NSP VM G +D++S +PD+ KRL I DPVASA FFH TI+AVL+ +LRF A DGDGG LG IKAY+GMTEEQ RL LH HL+VWV+G
Sbjct: 65 MFILFGQPFFWMTVNPSDLNSPFVMHYGGHNIDLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLKYILRFQANDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHG 179
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE) HSP 1 Score: 146 bits (369), Expect = 2.170e-39 Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 1 MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
M + GQP FWMT+NP+D NSP VM G ++++S +PD+ KRL I DPVASA FFH TI+AVL+ +LRF A DGDGG LG IKAY+GMTEEQ RL LH HL+VWV+G
Sbjct: 375 MFILFGQPFFWMTVNPSDLNSPFVMHYGGHDINLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLKYILRFQANDGDGGPLGNIKAYIGMTEEQHRLMLHGHLMVWVHG 489
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.330e-38 Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 1 MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
M M GQP FWMT+NP+D NSP VM G +D++S +PD+ KRL I DPVASA FFH TI+AVL+ +LRF A GDGG LG IKAY+GMTEEQ RL LH HL+VWV+G
Sbjct: 419 MSMLFGQPFFWMTVNPSDLNSPFVMHYGGHDIDLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHGTIEAVLKYILRFQANYGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHG 533
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Match: A0A6H5K355_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K355_9PHAE) HSP 1 Score: 130 bits (327), Expect = 5.840e-33 Identity = 65/115 (56.52%), Postives = 76/115 (66.09%), Query Frame = 1
Query: 1 MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQSIAGDPVASADFFHITIDAVLETLLRFGAKDGDGGVLGRIKAYVGMTEEQRRLTLHCHLLVWVYG 345
M +Q G P FWMT NP+D NSP VM +Y KRL DPVASA FFH T++AV++ +LRFGAKDGDGG LG IKAY+GMTEEQ RL LH HL+VWV+G
Sbjct: 328 MFIQFGLPFFWMTANPSDVNSPCVMQCG---------------EYRKRLDITVNDPVASATFFHETMEAVVKYILRFGAKDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHG 427 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.54.1 >prot_P-littoralis_Contig6.54.1 ID=prot_P-littoralis_Contig6.54.1|Name=mRNA_P-littoralis_Contig6.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp MIMQLGQPLFWMTINPADKNSPIVMMLAGVQLDVNSKLKSDLPDYVKRLQback to top mRNA from alignment at P-littoralis_Contig6:183037..183381- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.54.1 ID=mRNA_P-littoralis_Contig6.54.1|Name=mRNA_P-littoralis_Contig6.54.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig6:183037..183381- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:183037..183381- >mRNA_P-littoralis_Contig6.54.1 ID=mRNA_P-littoralis_Contig6.54.1|Name=mRNA_P-littoralis_Contig6.54.1|organism=Pylaiella littoralis U1_48|type=CDS|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig6:183037..183381- (Pylaiella littoralis U1_48)back to top |