mRNA_P-littoralis_Contig6.161.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A6H5JAJ0_9PHAE (OHCU_decarbox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAJ0_9PHAE) HSP 1 Score: 305 bits (780), Expect = 1.390e-96 Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLAEIAPPIDAGRSGSD 736
ME LQALPRH+LR++LLRCCHS+AWADAVL RMPFKSEEEA+AA+D+CWAKL+PADYLEAVAAHPAIGDKQALRDKFAPSRSGWE EQAAAAGASEAVLDEL+ELN EYR+KNGFVFLVCASG+ ADAILALLKARLPND+D E++NAVEEQRKITQLRFARLL EI+PP AG GSD
Sbjct: 1 MEALQALPRHELRQELLRCCHSNAWADAVLGRMPFKSEEEAQAAMDDCWAKLSPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDKEQAAAAGASEAVLDELSELNEEYRQKNGFVFLVCASGMPADAILALLKARLPNDRDTEIRNAVEEQRKITQLRFARLLMEISPPAIAG-GGSD 179
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A835YUP2_9STRA (Putative OHCU decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP2_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.460e-40 Identity = 85/169 (50.30%), Postives = 106/169 (62.72%), Query Frame = 2
Query: 194 AMEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLAEI 700
AM +L ALP + R +LLRCC + WAD VL MPF SE +AR LD CWA + P ++LEA +AHP IG K SGWE EQ AA A + VL L E N +Y +K GFVFL+CA+G SAD +LA L+AR + E+ A EE RKITQ+RF +LLA +
Sbjct: 7 AMSLLNALPPQRARAELLRCCTCNRWADEVLRHMPFSSESQARNTLDACWAAMGPQEWLEAFSAHPRIGAGGGDHKK----PSGWEAEEQKGAATAGQQVLQGLREWNRKYDDKFGFVFLICATGKSADEMLAALRARYHHHASTEMAVAAEEHRKITQIRFTKLLAGL 171
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A2W4HVW3_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4HVW3_9BACT) HSP 1 Score: 147 bits (371), Expect = 1.990e-37 Identity = 83/167 (49.70%), Postives = 110/167 (65.87%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIG-DKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLA 694
+E L A + EDL RCC S W + +LSR PF+S +E +A D+ W KL P D+LEA A HP IG D +ALR KFA + S W EQ + A+E VL L++LN EY EK G++F+VCA+G SA +L +LK+RL NDKD ELK A EQ KIT++R +L++
Sbjct: 9 LETLNAKSASEAAEDLERCCGSRVWVEKMLSRRPFQSVDELFSAADDIWFKLAPEDWLEAFAHHPRIGGDVEALRAKFASTAS-WAENEQKGVSQATEDVLHALSKLNDEYFEKYGYIFIVCATGKSARQMLDILKSRLLNDKDNELKVAAGEQAKITKIRLEKLIS 174
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A836Q8N7_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A836Q8N7_9BACT) HSP 1 Score: 144 bits (362), Expect = 3.510e-36 Identity = 78/153 (50.98%), Postives = 104/153 (67.97%), Query Frame = 2
Query: 236 EDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIG-DKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLL 691
EDL RCC S AW + +L+R PF S +E +A D+ W KL D+LEA A HP IG D +ALR KFA + S W EQ + A+E VL +L +LN +Y EK G++F+VCA+G SA+ +L +LK RLPNDK+ ELK A EQ KIT++R +L+
Sbjct: 22 EDLERCCGSHAWVEKMLTRRPFHSVDELFSAADDIWFKLAAEDWLEAFAHHPRIGGDVEALRAKFASTAS-WAENEQRGVSQATEDVLHQLAKLNDDYFEKYGYIFIVCATGKSAEEMLEILKGRLPNDKEKELKVAAGEQAKITKIRLEKLI 173
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: UPI0003826855 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI0003826855) HSP 1 Score: 140 bits (352), Expect = 6.630e-35 Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 2
Query: 194 AMEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLL 691
+++ L + + ++CC SSAW + + + P+++ + A D WA+L DYLEA HP IGD +LR K+A +++ GAEQ+ + A+E L L E N Y EK GF+F+VCA+G SA+ +L LL RLPND++ EL+NA EEQRKITQ+R +L+
Sbjct: 2 SLDTLNQQSTEEAKHTFMQCCTSSAWVERMTATRPYQNADSLFEAADRHWAELGEPDYLEAFEGHPKIGDVNSLRAKYANTKA-LAGAEQSGVSAATEQTLQALAEGNTAYEEKFGFIFIVCATGKSAEEMLELLNQRLPNDRETELRNAAEEQRKITQIRLGKLV 166
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A4Y6PTI7_9DELT (Probable allantoicase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PTI7_9DELT) HSP 1 Score: 148 bits (374), Expect = 1.320e-34 Identity = 77/167 (46.11%), Postives = 107/167 (64.07%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLAE 697
+E L LP +E + CC S+ WAD ++ + P+ S E + DE WA L DYLEA +AHP IG+++A D+ S+ W EQ AA AS +LD L E N Y+E++GF+F+VCASG SAD +LA+L+ RL ND+ E++NA EEQRKIT LR +L+ +
Sbjct: 336 LEWLNTLPEGAAKEAFITCCGSTRWADTMVEQRPYASIEALQQTADEVWADLGEEDYLEAFSAHPKIGERKAEGDQTEKSKQ-WSEQEQKGAADASNEMLDALLEKNVAYQERHGFIFIVCASGKSADEMLAMLEERLENDRATEIENAAEEQRKITALRLEKLIGK 501
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A848LKZ2_9DELT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=3 Tax=Pyxidicoccus TaxID=224458 RepID=A0A848LKZ2_9DELT) HSP 1 Score: 139 bits (350), Expect = 1.370e-34 Identity = 77/166 (46.39%), Postives = 98/166 (59.04%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLA 694
+E L + + R +LLRCC SS WAD ++ PF+ E A W + P D+ EA+ HP IGD LR KFA S + W EQ GA EAVL L + N EY + GF+FLVCA+G SA +LALL+ RL N D EL+ A EEQ KIT++R +LLA
Sbjct: 4 LERLNKMMSSEARAELLRCCGSSRWADGMVRSRPFRDAEHLLAEAAWLWKQTGPEDWREAITHHPRIGDVSQLRAKFA-STATWSSQEQGGVVGADEAVLQGLADGNAEYERRFGFIFLVCATGKSAAEMLALLRERLDNSPDEELRIAAEEQAKITRIRLEKLLA 168
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A4Q5NTB6_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q5NTB6_9BACT) HSP 1 Score: 139 bits (349), Expect = 2.050e-34 Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 2
Query: 194 AMEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLL 691
A++ L A ++LLRCC +S W V++ PF + E +E KL D+LEA A HP IGD +LR KFA + S W G EQA ASEA L L + N +Y +K GF+F++CA+G SAD +LA+L+ RL NDK+ EL+NA E+Q++IT+LR +LL
Sbjct: 6 ALQKLNAATEGAAWDELLRCCGASKWVLIVMNGRPFANVETLYTRSEEALNKLDHTDWLEAFAHHPKIGDIDSLRSKFATT-STWAGNEQAGTNAASEATLQALAQGNTDYEDKFGFIFIICATGKSADEMLAVLQTRLNNDKETELQNAAEQQKQITRLRLGKLL 170
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A7S1XZH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZH1_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.190e-34 Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSG----WEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLLAE 697
++ + P LREDL+R CHS+ WA ++ PF S + + + W + AD+LE HP IGD ALR KFA +++ WE EQ+ A GA+E L L + N +Y K GF+FLVCASG +A+ +LA+L++R PN +D E+ A EQ KIT LR +LLAE
Sbjct: 36 LDYVNNAPAAALREDLMRVCHSATWASTMIEARPFASVADLKRYAADFWMAVDEADWLEGFRGHPRIGDVDALRKKFAAAKATGAKVWESGEQSGADGAAEETLVALRQANVDYEAKFGFIFLVCASGKTAEEMLAILQSRFPNPRDEEIVVAAGEQNKITMLRLDKLLAE 206
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Match: A0A6L3EM52_9PROT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L3EM52_9PROT) HSP 1 Score: 138 bits (347), Expect = 3.330e-34 Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 2
Query: 197 MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEGAEQAAAAGASEAVLDELTELNGEYREKNGFVFLVCASGLSADAILALLKARLPNDKDAELKNAVEEQRKITQLRFARLL 691
++ LP H++R L CC ++ W D +L+R PF+ + A + W +++ D+LEA AAHP IGD +LR+K+A +R G EQAA GA L E+ LN EY + GF+F+V ASG SA +L LLKAR+ N +D EL+NA EQ KIT LR RL+
Sbjct: 3 VDSFNRLPEHQVRARLTDCCAAARWVDLMLARRPFRDAGDVARAARDAWMQMSTRDWLEAFAAHPRIGDIDSLREKYASTRE-MAGGEQAAVGGADVDTLREIGRLNREYENRFGFIFIVFASGKSAVEMLELLKARIDNTRDQELRNAAAEQLKITLLRLDRLV 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.161.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.161.6 >prot_P-littoralis_Contig6.161.6 ID=prot_P-littoralis_Contig6.161.6|Name=mRNA_P-littoralis_Contig6.161.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp MEILQALPRHKLREDLLRCCHSSAWADAVLSRMPFKSEEEARAALDECWAback to top mRNA from alignment at P-littoralis_Contig6:661372..665036- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.161.6 ID=mRNA_P-littoralis_Contig6.161.6|Name=mRNA_P-littoralis_Contig6.161.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=3665bp|location=Sequence derived from alignment at P-littoralis_Contig6:661372..665036- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:661372..665036- >mRNA_P-littoralis_Contig6.161.6 ID=mRNA_P-littoralis_Contig6.161.6|Name=mRNA_P-littoralis_Contig6.161.6|organism=Pylaiella littoralis U1_48|type=CDS|length=585bp|location=Sequence derived from alignment at P-littoralis_Contig6:661372..665036- (Pylaiella littoralis U1_48)back to top |