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Homology
BLAST of mRNA_P-littoralis_Contig6.112.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI) HSP 1 Score: 1065 bits (2754), Expect = 0.000e+0 Identity = 644/926 (69.55%), Postives = 697/926 (75.27%), Query Frame = 2
Query: 134 MQLVLRSASLYPXXXXXXXXXXXXXXXXXXXXXXXTASVVACELMAVSESLDLAMLFRSNMICAVSLLDVPDAATPAAXXXXXXXXXXXXXXXXXXXXXXXXAGEEDPFNIVSFSANCEPRPGDDVIPSDSIPSKTPIKGLEFSPSGHSLLIWGESYVAVARLPRGSGSSGSSRSNISGVGNPTP---------NKYSSXXXXXXXXXXXXXSARWKWTLVDMSGYTVDVMRQRIVQASWHPASDSCVTLLTVGKGDVYVAVAKAGAKAFVMLHVPGRERPEQVLPIPDGSSLSPPVAFAHSHCAGWQRFAVWIARKDGSVGALCPVVPQSAKVDVEELWDLWSATSDTLVAARWEQXXXXXXTGLGSSQQESALAEEVSRLEQQQAWLRETFPHVFDAQDRGGTAAG-PAG-ALATRTPRHLVLQDRILAGRPEEDASAGPACGLVVLAGVGGGEGGDADEAAVAAPPPVALAVAYRAGCVDIALVPAGIGPRRWSERAGQRVSCATAA-----GETTAAAGAVLESLDLAERVTDKTARRRQGLSLSVSAGA-WTFLAATPCRLTSITVTWAGRIEMAAQRARQRAAAAAHGVSRSTE--RLDGDLRALLRERPDSAVNEVLFLPSSSAGRVVGVVPVASPIVGHLAMARLAGGKVEMVNLAVMTLQATEVASAAKRAEAQESPGRGDMLPRFETALQKAVNALDERRMAEPLGSSVGHLLMSQLDQEGVGVVEEQADRLVDGGIVVLEKLHLKTSTRLETLCEVYEHQAGLTKGLAKEVARLRSGQEDRAVTLEEINDMADEQRARSAGVLAVVQATRPDVSPAERAFMSEMKEMENYADRQQVMMEPATKQVEELRLAEEEAEDYLVREAQG-------TGLSERETRDVWNMLQADKERILNLSRRMEAARDRLAKLGVRE 2833
MQLVLRSASL+P XXXXXXXXXXXXX TASVVA ELMAVS L LAML RSN I AVSL+DVPDAA A E+DPF+ VSFSA+C PRPGDDVIPSDSIP KTPIKGL+FSPSGHSLLIWGESYVAVARLPR + ++G S GV TP SARWKWTLVDMSGY VDVMRQRIV A+WHPASD CVTLLT GK DVYVAVA GAKAFVMLHVPGRERPEQVLPIPDG ++SPPVA AHSHC GWQRF +WIA+KDGSVGALCPVVPQ+AKVD EEL LWSAT DTLVAARWEQ SQQ+SAL EEV+RLEQQ+ WLRETF HVF QD GTAA PAG AL RTPRHLVLQDRILAGR E+A A ACGL VL GVGG V LAVAYR G VDIALVPAG+ PR WSERAGQRVSCA AA GET+ GAVLESLDLAERV DKTARRRQGLSLS A WT LAATPCR+ S+TVTWAGRI+ AA+RAR+RAA G + S+ RLDGDLRA+LRERPDS VNEVLF+P S+GR+VGVVPV SPIVGHLAMARLAGG VEMVN+ VMTLQATEVASAAKRAEAQ++PGRGDMLPRFE ALQKA + E + PL + GHL MSQLDQ+GV VVEEQADRLVDGG+VVLEKLHLK S RLETL EVYEHQ+GL KG A+E+A LR+GQED+ EEIN MADEQRARSAGVLAVVQATRP+VSPAERAFMSEMKEMENY DRQQV +EPA KQVEEL +AE EAED+LVREAQG GLSERETRDVWNMLQAD+ERILNL RRM+ A RL +LGVR+
Sbjct: 1 MQLVLRSASLHPPXXXXXXXXXXXXXGA-------TASVVASELMAVSAGLHLAMLCRSNTIRAVSLMDVPDAAAHAPSSGSIRTPSSAQQRR-----------EDDPFHAVSFSADCAPRPGDDVIPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPRSARTTGGSNP-THGVPPATPFLSPPRDLTASGRRRGTAGGDGTSGDKSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGT----DSQQQSALDEEVARLEQQKGWLRETFSHVFYGQDNDGTAAAVPAGGALVARTPRHLVLQDRILAGRTGENAGA--ACGLAVLQGVGGXXXXXXXXXXXXXXX-VVLAVAYREGWVDIALVPAGVSPR-WSERAGQRVSCAAAAAGGSGGETS---GAVLESLDLAERVEDKTARRRQGLSLSAGGSASWTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTNSSSGSGRLDGDLRAVLRERPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQATEVASAAKRAEAQDTPGRGDMLPRFEAALQKAKKDIGELQANRPLALAAGHLKMSQLDQKGVRVVEEQADRLVDGGVVVLEKLHLKMSRRLETLTEVYEHQSGLVKGTAREIASLRNGQEDKTEWAEEINGMADEQRARSAGVLAVVQATRPNVSPAERAFMSEMKEMENYTDRQQVKIEPAAKQVEELCMAEREAEDFLVREAQGLGTGGRGAGLSERETRDVWNMLQADRERILNLVRRMKTALARLDELGVRK 896
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 29730.Gorai.011G286200.1 |
| PFAMs | Nup88 |
| Model size | 3850 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K14318 |
| KEGG TC | 1.l.1 |
| KEGG Pathway | ko03013,map03013 |
| KEGG Module | M00427 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000054,GO:0000055,GO:0000056,GO:0002376,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0006955,GO:0008104,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009627,GO:0009814,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0017038,GO:0022613,GO:0031503,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0042254,GO:0042886,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045087,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051707,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0098542 |
| Exons | 12 |
| Evalue | 3.83e-05 |
| EggNOG OGs | KOG4460@1|root,KOG4460@2759|Eukaryota,37MVC@33090|Viridiplantae,3GFG1@35493|Streptophyta |
| Description | nuclear pore complex |
| Cds size | 2754 |
| COG category | UY |
| BRITE | ko00000,ko00001,ko00002,ko03019 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791235.8028715-UTR-P-littoralis_Contig6:411469..411557 | 1680791235.8028715-UTR-P-littoralis_Contig6:411469..411557 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 411470..411557 + |
| 1680791235.9322286-UTR-P-littoralis_Contig6:422031..423039 | 1680791235.9322286-UTR-P-littoralis_Contig6:422031..423039 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 422032..423039 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791235.8132124-CDS-P-littoralis_Contig6:411557..412424 | 1680791235.8132124-CDS-P-littoralis_Contig6:411557..412424 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 411558..412424 + |
| 1680791235.821966-CDS-P-littoralis_Contig6:414437..414605 | 1680791235.821966-CDS-P-littoralis_Contig6:414437..414605 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 414438..414605 + |
| 1680791235.8321307-CDS-P-littoralis_Contig6:415170..415263 | 1680791235.8321307-CDS-P-littoralis_Contig6:415170..415263 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 415171..415263 + |
| 1680791235.84093-CDS-P-littoralis_Contig6:415600..415690 | 1680791235.84093-CDS-P-littoralis_Contig6:415600..415690 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 415601..415690 + |
| 1680791235.849478-CDS-P-littoralis_Contig6:416116..416391 | 1680791235.849478-CDS-P-littoralis_Contig6:416116..416391 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 416117..416391 + |
| 1680791235.8578916-CDS-P-littoralis_Contig6:416720..416979 | 1680791235.8578916-CDS-P-littoralis_Contig6:416720..416979 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 416721..416979 + |
| 1680791235.866464-CDS-P-littoralis_Contig6:417876..418119 | 1680791235.866464-CDS-P-littoralis_Contig6:417876..418119 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 417877..418119 + |
| 1680791235.8755774-CDS-P-littoralis_Contig6:418771..418852 | 1680791235.8755774-CDS-P-littoralis_Contig6:418771..418852 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 418772..418852 + |
| 1680791235.8846061-CDS-P-littoralis_Contig6:419336..419516 | 1680791235.8846061-CDS-P-littoralis_Contig6:419336..419516 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 419337..419516 + |
| 1680791235.8972454-CDS-P-littoralis_Contig6:420214..420367 | 1680791235.8972454-CDS-P-littoralis_Contig6:420214..420367 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 420215..420367 + |
| 1680791235.9079995-CDS-P-littoralis_Contig6:420849..420966 | 1680791235.9079995-CDS-P-littoralis_Contig6:420849..420966 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 420850..420966 + |
| 1680791235.920287-CDS-P-littoralis_Contig6:421803..422031 | 1680791235.920287-CDS-P-littoralis_Contig6:421803..422031 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 421804..422031 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.112.1 >prot_P-littoralis_Contig6.112.1 ID=prot_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=918bp
MDITPRRAVSSAATQMQLVLRSASLYPPPTTSLDAAAASSGGGGGGGSGG TASVVACELMAVSESLDLAMLFRSNMICAVSLLDVPDAATPAAAAAAARA PSSTSTSTRTPQRQRQRAGEEDPFNIVSFSANCEPRPGDDVIPSDSIPSK TPIKGLEFSPSGHSLLIWGESYVAVARLPRGSGSSGSSRSNISGVGNPTP NKYSSGDGSSSSSSSSDKSARWKWTLVDMSGYTVDVMRQRIVQASWHPAS DSCVTLLTVGKGDVYVAVAKAGAKAFVMLHVPGRERPEQVLPIPDGSSLS PPVAFAHSHCAGWQRFAVWIARKDGSVGALCPVVPQSAKVDVEELWDLWS ATSDTLVAARWEQQQQQQQTGLGSSQQESALAEEVSRLEQQQAWLRETFP HVFDAQDRGGTAAGPAGALATRTPRHLVLQDRILAGRPEEDASAGPACGL VVLAGVGGGEGGDADEAAVAAPPPVALAVAYRAGCVDIALVPAGIGPRRW SERAGQRVSCATAAGETTAAAGAVLESLDLAERVTDKTARRRQGLSLSVS AGAWTFLAATPCRLTSITVTWAGRIEMAAQRARQRAAAAAHGVSRSTERL DGDLRALLRERPDSAVNEVLFLPSSSAGRVVGVVPVASPIVGHLAMARLA GGKVEMVNLAVMTLQATEVASAAKRAEAQESPGRGDMLPRFETALQKAVN ALDERRMAEPLGSSVGHLLMSQLDQEGVGVVEEQADRLVDGGIVVLEKLH LKTSTRLETLCEVYEHQAGLTKGLAKEVARLRSGQEDRAVTLEEINDMAD EQRARSAGVLAVVQATRPDVSPAERAFMSEMKEMENYADRQQVMMEPATK QVEELRLAEEEAEDYLVREAQGTGLSERETRDVWNMLQADKERILNLSRR MEAARDRLAKLGVRELE* back to topmRNA from alignment at P-littoralis_Contig6:411470..423039+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig6.112.1 ID=mRNA_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11570bp|location=Sequence derived from alignment at P-littoralis_Contig6:411470..423039+ (Pylaiella littoralis U1_48) TACAGGTTCATCCACTTCACACACTACAGCAGTGCTCCATCATTCTCTCG
GGTAGAGCAGGCTTAGCAGGAGATACGACGACGTCGCAATGGACATTACT
CCGCGGCGTGCGGTATCGTCCGCGGCAACCCAGATGCAACTCGTGCTGCG
AAGCGCATCCTTGTATCCACCGCCCACCACTAGCCTCGATGCTGCTGCTG
CGTCTTCGGGCGGCGGCGGCGGCGGCGGTAGCGGCGGCACGGCGAGCGTC
GTCGCCTGCGAGTTGATGGCCGTCAGCGAGAGTCTTGATCTCGCCATGCT
CTTCCGGAGCAATATGATTTGTGCCGTCAGCCTTCTCGACGTTCCCGACG
CTGCCACCCCAGCAGCAGCAGCAGCAGCAGCACGGGCTCCCAGCAGCACC
AGCACCAGCACCAGGACGCCACAACGACAACGGCAGCGGGCAGGAGAAGA
GGACCCTTTCAACATCGTATCCTTCTCCGCCAACTGCGAACCGAGGCCGG
GAGACGACGTTATCCCCAGCGACTCCATCCCGTCTAAAACGCCCATCAAG
GGGCTAGAGTTCTCCCCCTCCGGCCATAGCCTGCTCATCTGGGGCGAGAG
CTACGTCGCCGTTGCCCGCCTGCCGCGCGGCAGCGGCAGCAGCGGCAGCA
GCCGCAGCAACATCAGCGGCGTCGGTAACCCAACGCCAAACAAGTACAGC
AGTGGGGACGGTAGCAGCAGCAGTAGCAGCAGCAGCGACAAAAGCGCTAG
GTGGAAGTGGACGCTGGTGGACATGTCGGGGTACACCGTGGACGTGATGC
GGCAGAGGATCGTGCAAGCCTCCTGGCACCCGGCGAGCGACAGCTGCGTG
ACGCTGCTGACGGTCGGGAAGGGCGACGTCTACGTCGCCGTCGCGAAAGC
GGGGGCCAAGGCGTTTGTCATGCTGCACGTGCCGGGCCGCGAGCGGCCAG
AGCAGGTTGGTCATACGCGTGCGTGCGGCTGTCATGGGTATATAAAAGGA
GACGGCAAGAAAATAAAATGATCATGCCTCCAACCAAATCTGGTCATCAT
TTGTTTGGTCAGTAACGTGTAAATGCACCTCGTACCATGTGCGGGAGGAC
ACGATAATGGTACGAAGTACTTCGTATCCACCATATCATACTTGTACCAT
ATCATTCTTTGAAAGCAATCCGACGAATATCGTCGGCGTTGCTAGTCCCA
AGCTGCTTTTTTTTTTTTTAATAAGCTGCAAGTAACACGGTAGCATCTAG
CGGGGAGATTTTCAGGACGACGTCGAGCAGACTCCCAGGGTACTACCTCA
TCTTTCTGCTTCTCAAGCATCAACGCTGACGTGTCTTGACTGCAGTGGCC
ACACGTTTCAGTCCCCTTTCAGTCCCCTGGGCTGAAGGGGCGGGGAACTA
GATGAGAGCAACATACTTGAGCGCGCTCAAGCATGTTGCTCTCACCTAGT
ACGTGTGGCCACCGCAGTCGAAGACGCGTCAGCGTTGATGCTTGAGAAGC
AGAAAGATGAGGTAGTACCCTAGGAGTCTGCTCGACTTTGTCCTGAAAAT
CTCCCCCACGTACCATATCATACAGCAGAAATCTGTAGTTTGGAATTCAC
TCACCTCTCAAGTCCACGGCATCTCCGTGTCAAACACTTGTACCATGGCC
CCTGCCCATGGCCGACCTTACAGCTTATTGAGCTAAAACACACATTTCTG
TACCAGGATGTTGTGATACGCAAATGTTCCAGAATTTGACAGCCATGTGG
ACATTCAACTCAAAAAACCTAAAGTGGCAGCATCGTGCCCAGACGCCCGC
GTCACGAACGCAACTACTGCTTGCAGCCGCAACGCTCCGTTACAAATCGG
ACCAACACTCGAAAGGATCCACACGGGCGTAGAGCAGGTTCTCCTACAAA
TATACGAAGTACAGAAACACTGTGCTGCTGCCTTTACGAAAAACGTCTTT
TTTTTTACCGGCAAAATTCGTCATCGCACGGAGTCCCCAACCTCCATTAT
CCTGTGACACATCAAATCATCCTGCTGGTTCGCCGCCTGTAGTGCTGATC
CAAAGTTGTACCAGCATTTTTGGGTGGTTTATCCACCACGCTACACACCC
TCCGAGTTTCAGCTGATTTGGTGAATTCTACGAGTGATCAACGTTGATCT
ATAGTTTTGCACGAAACGATGAAATGTTGGCTACATTTTCGGAGGTAGAC
ATATTGTTATTCTTGGTTCAAACTCTTACCTAGTACAAGTAGACTGGAGC
TCAGACTAGTCTCGGTCGATTTTTAGGCAACTTTTATAGGCCCATGGTCA
GCGCTGTAGTGCTGATCCCAAATTCACACACTTTTGTTGGGTAGTACATC
CACCAAGGTACACCCCCTGCGAGTTTCAGCCAATTTAGGCATCGCCACGA
GCAATCAACCTTAGCGCGAAGTTTGTCTCCCGAGAGCTTAAAACGAGCTC
TGGACGCAGAGAAAAATGGCTTGCTTCCAGTTGCGATGGCGCAGCATTCC
TGCAGTTTGAAGCAAAACCAAAGCATATAAACTACTGGAGAAGGTATTAT
AGAACACGACCCTTTTGAGACCCCCTGTCGATATCGTAGCAAGCCGGGGT
CTGTGTGAGGAGCAACACCGGTGACAAAGGTCATGACTACGAATGGAGTC
TGCATCACAAATTCACAAATCTGAGAGGGGCTCAGGGTTTCGTCACGTGG
TACCCGCCAGAAGCCTTTGTCGGTATACAAAAAAAAATCAAAGCAGCATA
TGTGGTAATATCATGTGGAAGCAAAAAATCAAAGAGCCTGCTCCTGTTGC
ACATGGGCTAGCTTTGGCGCTCTTGTCTTTGAAATGAAGGCACACAAGCA
CGCGTGCAAGCGCACGCGCACGCGCGCACACACACACACACACAAAGAAA
CACGCCCCGATGTACACACACACACATAAAATTTACATACTCACGCTCGC
ACGGGCGTACACATTCAGGTGTTACCCATTCCCGACGGGTCTAGCTTGTC
TCCCCCAGTCGCGTTCGCCCACAGCCATTGCGCCGGATGGCAACGCTTCG
CTGTGTGGATCGCGAGAAAGGACGGTTCGGTGGGCGCTCTGTGTCCCGTG
GTGCCACAGAGCGCCAAGGTGGACGTCGAAGAGCTGGTGAGCTGAGCCGG
ACTAAGCCGAGCCGGGCGTTGAAAGCAGATGACCGGCGCTTAACGTCTGT
AGGGTATCATCAAGTCTTGTGGTACCGCTGCACTCCTTTCTTGTGAGGAT
TTCACCGAATGAGGCCCGCAGTTAAAGCCAGTTTTGACACCTGCCGTAGT
CTGTCAGCGGTTTCGCACAACCCGAGAGAAGGTTTGGAGCACTAGAGTGT
TTGTTTGTGTTTTGGTGGTTTTGTGTTGTTTGATGGTTGCACTGTTACTG
CTGCTGCTGCTCCTGTCGGAAGGTTAGCACGCCTGGGGTGTAAACCGCTG
TTCCATCCGTGTGTGCTGCTGTCTTCTTCTGGCTGTCTGTCTGGCTGGCT
GCCTGACTGTCTGTCTTTCTGGCTGCTGTCTGTCTGGCTGTCTGCTGACT
GGTTGTCCGTCGCATGATTTGGCACCTCGCATACGTGCATGAGAAACTCG
AGTTCGTCTTGTTGGTGTGCTACGAACTAATGTATGCTTACAGTAGCCCG
TGACAATATTCAACCGATTGTGCGCACGACACGTCCTCTCGTATTGCCCA
GTGGGACTTGTGGTCGGCGACATCGGACACTTTGGTGGCCGCCCGATGGG
AACAGCAGCAGCAGCAGCAGCAAACCGGGTTGGGCAGTAGCCAGGTATGC
ATTTTTTGTCATTGCGTGTTGTTGCTGTTTTCGCCGTTCTGAGACGGGGA
AGACTCGAACCCGGGGGGGGGTAGAGTTGGATGCCGCTGTGCGACTATTG
TTTTGCTGTTGGTTGTTGTGGCGGTGTTGACAGTGTTGTTGTTGCCCGCC
TCGTCTCTTTCGGTGTATGATTATGGTCGGAATGAGTGCCCGGTTAGACT
ATATTTCGTGTGTTTTGCATCCAGCTATTACAGACAGACATAAAACACCC
TTTCTAGCGCCATCGTCCTTACCGCCACCGCCACTACCGCTGCCGCCGCC
TCACCCTGTCGGGGTCGAATCCTCACGGGAGCAGGAGAGCGCACTCGCGG
AGGAGGTGTCGCGACTCGAACAACAGCAGGCGTGGCTTAGGGAGACGTTT
CCCCACGTGTTCGATGCACAGGTGAGCGAAAAATAATTTGCGGAAAATGG
TGTGTGTGTGATGTTGGTTGTACGATTGACCGTGTAATGAACGGGAAGGC
CAGAAAGCACTGCATAAGGATGTCAGGGGAGGGAGCATCACCCCTGGATA
GAAGCCCTTCGGTCTGCCTAAGGTCTGAGACATGTCACAAGGAAATAGAT
GATACGGTGGTACCGGGTGGGCTTTTATTTCGGGTGTTTTGGGGGAGCAC
AGAAACCAACTGCGGGCACATGATGCCACATTTGTGATACGTACAAAGAT
ACGCGACGGCCATGAGCACGTTGGTATTCTCTCCTCGTTTTCTTGTTAAC
GTTTGACGAAGTTGATCGACCGGCCAGGTAACCCTCACGTTCAAAAAAAG
ACTTCCGATCGAACCCGCAAAAACCTCGCCCACGCTCGCCGAAACAGGAC
CGAGGCGGCACAGCAGCAGGGCCAGCAGGGGCATTGGCCACCCGAACCCC
TCGCCATCTCGTCCTCCAGGATCGCATTCTGGCCGGGCGACCTGAGGAAG
ACGCCAGCGCCGGCCCCGCGTGCGGCTTGGTCGTGCTCGCGGGGGTGGGC
GGGGGCGAAGGCGGAGACGCCGACGAGGCGGCCGTGGCTGCGCCGCCGCC
GGTTGCGCTGGCGGTGGCGTACCGGGCGGGGTGTGTAGATATTGCCCTGG
TGCCGGCAGGGATCGGTCCCAGGTGCGCGGTATGATAGCAGCGGTGGTAG
TTTGTGTGCCTGTGTACTTTGTATTTTGTGCGTTGTGCTTCTGCTTCTGC
TGCTGCTGCTGCTGCTTTGCTGTGGTGTAACTGTCCATGGCGTACCAGGG
GGGTTGGTTTGTGTAGAGGTTGCGCTAATGGGTTTGCGGGGACGTTGATG
CCCTCCCTCTTCCCCTCTGATCTTCGAGCGCAGCAGCCAGCTTGCCGTAG
CCCCGCCCCCGCCATTTCCTTTTGATCATATCATACCACCCTTGACATCC
GTGATTCGACTCCCGCCATAAAAAAAAACGACAACAAATAACCCCCCGGA
GAAGGTGGTCCGAACGCGCTGGCCAGCGAGTTTCTTGCGCGACTGCGGCA
GGGGAGACAACGGCCGCCGCCGGAGCGGTGTTGGAGAGCCTGGATCTAGC
GGAACGCGTGACGGACAAGACTGCGAGGAGAAGGCAGGGCCTGTCGCTCT
CCGTGAGCGCGGGGGCATGGACGTTTCTCGCCGCCACCCCCTGCCGGCTG
ACCTCCATCACGGTGACCTGGGCGGGGCGGATCGAGATGGCGGCGCAGCG
AGCGAGACAGGTGCGATGCGATGCGATGCGATGCGCTGCGCTGCGCTGCG
GTGCTGCTGTGTGGTACTTTTGACCTTCTCGCCTTCTTGCTTCCTCCCCC
TCCCTCATCCCTCTCTCTCTCTCTCCCTCTCTCTCTCTGCAGCGCGTGTG
TTCACATCCTGTTGTTGTTATTCATGATTGTTTTCTCCTTGTCGCGTCTC
CACAGTGTCTCCCTTCGGTGTGTGTGTGTGTGTGTGTAGCTTGCTGCCCC
CTTGTATGTATTCTCGTTCATGACATGACCGCTCGGTGGGTCCGAATCTC
CTGCTCTGGACTCTCTTCTGGGCTTGTGTTGGCTGCTGATGTTGTCCTTT
TCTTGCTACCCGTCCCGTCTGGCTCTCCGGCCGTTTTCTTCCATCTAGAC
GGTGATTTCTTTTTCGAGTCGTGTCTTCTTTCCTGCTGTGTCTCTCCGTG
CTCCCGACTATCTCTCCTTGTTTTTTTTGTTGCGCACCCTGTCCTCGTTT
TGTTAGCCTTTGCGCTCTAACCCCCTCTTTCCCTGTCTTGTACACACACC
GCAAGAGGTGTCGTGTGCACACATCATATCATATACACATGCGAATGACG
CAACATGGGTGTCCCTTCTTTTTTTTCTGCACACATCAACTTATCTTCTC
CACGTGCACTACACTACGCACATGATCGAGTGTTTGTATAAAATGTTGAA
CCCTTTCCTGGTTTTTTTTTTTGCTCTCTTCTTGCACTTTTATCTTTTAT
ACCCCGTTCTTGTTTTCTCCACGTAAAGCTTCGTTTTGTTGTCTTCGTCT
TCGTTCAACCTGTTCCTCCTTCCCCCCTTTATTCTCCTCCTCTTCCTCCT
CCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
CCCGAAGCGCGCTGCCGCTGCCGCGCACGGAGTGAGCCGCAGCACCGAAC
GCCTCGACGGGGATCTACGAGCTTTGCTTCGCGAGAGGCCCGACTCTGCC
GTCAACGAAGTCTTGTTCCTGCCGTCCTCGTCGGCTGGCCGGGTTGTCGG
TGTCGTTCCTGTGGCCAGCCCCATTGTCGGGCACTTGGCCATGGCGAGGC
TGGCGGGGGGGAAGGTGGAGATGGTCAACTTGGCCGTTATGACGCTGCAG
GTAAGTCAGGCCTTTATTTGTGTGCGTGTTTTTATAGGGGGGGGGGGAGA
TAGATTTGGTGTGGTAGTAAGCGTCTGTTGGTATCATTTATGACGAAGCG
AACATGCAGGTTCTGATACGCGCAGGAAATCGGGCGGGTTTGTTTTATTG
CTGTTGTGGTCGCTTAAGGGGGCGCTGGCTGCGACAAGACGGCAAGAGTG
CTTCGCGACCGAAACGCCCACGAGGAAATGCTTGTTGCTGCCGCTGTTGT
TTTAGTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCCTATTCCTGTTCCTG
TTCCTATTCCTGTTCCTGTTCCTGTTCCTGTTCTTGTTGTTCTTGTTCTT
GTTATTGTCATTGCTGCCTTTTCGGAAGTCTCTCGTTGTTCCTGTTGTTG
TTACTGCTGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTACTTCTTCTTTC
GTCGCTGTTACTGAATCGGTTTGGACGACTGTCGTTGGTTGTCTTGCCTG
CCTTGTCCCTCATCGTCCTCGTCTCTCCAAGTGTAACCTAACCAGACACG
CACGCACATGTTCCCAACCCTGCTCCATCACCTCCCGTCCGACACGCTGT
TTTCTCTCGATTTTGGCCGTTTTTTTTGGGTTGGGGTCTCTGCATGACCC
AGGCAACCGAGGTGGCCTCTGCCGCCAAACGCGCCGAAGCCCAGGAAAGC
CCAGGCAGGGGCGACATGCTCCCCCGCTTTGAGGTGGGCCGCTTGCTTGC
CCACTGTGCCGCGTAAAACATTAGTCCAGATGTATCCGTTTACAAGGGCT
GAGCAGGGCTAATCGTTGACTCCCGGAACGATGTTTCGGATGCGGGTGAC
AGGCTGTAAATGCCCCTCCCCCCCCCCCCCCCCCCCCCCCCGATCTTTAT
TTCTCCGTCTCGGTCTTGCTTTTGTCCTCTCGCTTTTCTTGTCTCTTTCT
CCGTATCCCCCAACCCCGCTCTCTGTTCTAGCCCTTTCTCTCGTATCTCT
CTCTCGTATCTCTCTTCTCGTAGGCTAAGGACACATTAAAGGTCCGTTCG
TTTTTGCCTCGTGCTCGTCATGTACTGCTGTACAAAAATACACGAGTTTC
TCCATTTACTTGTTATCCATCATCATCATAATATCTCCCCCCTCCCCCCC
CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCATTTATCTGTG
TATCTATCGCTACTCAGACCGCGCTGCAGAAGGCGGTGAACGCGCTGGAT
GAGAGGCGGATGGCCGAGCCGTTGGGTTCCTCCGTCGGCCACCTTCTCAT
GTCGCAGCTGGACCAGGAGGGCGTGGGCGTCGTGGAGGAGCAGGCAGACC
GCCTCGTGGATGGCGGCATTGTCGTCTTGGAGAAGCTGCACCTCAAGGTG
TGCTCCGTATCATACGAACCAACCACACGGTAATTTGTGTACTCCGTCTA
TCGAGACGAACCACGACGGTTGTTTCTTCCTCTTTTATTTCCCCATTTCA
TGGGAGCGGTACGGCGGCACCGTCGCCTAGGAGAAGCCGCACCTCAAGAT
AACTACGTACCTGTCTTAGCCACGCATTGCTATTTTTCCATCCCGTGATA
CGTGAGGTGTGTTGCACCGCTCCTACGACAACCTTGCCCCTTCCGGGCCG
ATTTTTGGATCGATTCGATTACTCGCCTGGGCCCCCGAAAATATCTAAAA
AATGTGCCTTTTTTTTTTCCAGGATTCATTTTGTAGCTCTGAATCTTAGG
TTCTTTGTCGACTGCACGTAAAGATTACGATGGTGGAAAAATCGCCCAGT
AATGGTTGCTGTGCTACCAATGGAAGGAATTAATACATTTGTGGGCACGA
TGGTTGTGACTACAGCAGTAAACCGGAGGGGGAGGGTGTAATTTCCCCTG
TCAGCAAGCTTTCACCACTGGGTCAGTGACCACGCGCATCTCTCGTCTCT
CACCGCGTTTGTTAGACACCTGTTATGCGTAAAAAATATTTCGTATCTTG
CAAATTTTGACTGAAAACGCTGTACCCCCCCCCCCCCCTTCTACCCCGTC
CCTCGCCGTGGTGGTCATTCCCCCCCTCCCCCCCCCTTGACGTAGACAAG
CACGCGCCTGGAAACCCTGTGTGAGGTGTACGAGCACCAGGCGGGCCTGA
CGAAGGGATTGGCGAAGGAAGTAGCTCGGCTGAGGAGTGGGCAGGAGGAC
AGGGCGGTCACACTGGAGGAGATCAATGACATGGCGGACGAGCAAAGAGT
GAGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTATCATTGTTATGATTGTTGTCGTTGTTTTGTAATTT
TTGTCGAAAGCAGGAGACTGGGTGTTACTTCTGTCCTGTTACTTCGGAGC
AGCTGATGATGCAGGAGCAGCACTCATGACAGTGCAGTTGTCGATTTGTT
GTCGATTTCTATGCCCAGTGATGTCGGCGTCGGCGTCGTACACACCAACT
ATACAGTAGTAGACCCCCGGAGAATAGCCAGGTGGCAGATGTTACAGTAG
CCAGGCGCTCGATGTCAAGGACAAACTGCTGGAATGCAAAAACTCCGATA
TCGAGCTCATGATCCAACGAGCGATGGTGCAACCATCTGCCCCCCGCCTC
CGTGCCCCCCCCCCCTTTCTGCCCGTTGGACTGGCTGGTTGCTGCTGCTT
CGGACCTGCCGTGTTCGCCCTACCTTCCAGGCCAGGTCGGCTGGTGTTCT
GGCGGTGGTCCAAGCGACGCGACCGGATGTTTCTCCCGCTGAGCGCGCGT
TTATGTCGGAGATGAAGGAAATGGAGAATTACGCCGATCGGCAGCAGGTA
GAGTAAAATGTGCATCATGTGCAGCATGCGTCGAATGCAGCACGCATCAA
ATCAAATGCATGATACCGATATGTACGCATCAAATGCAGTACCAGTATGT
ACGCATCGTGTGCCGCATGTACGCATCGTACGGAGTTCGCGTGCGCCGTT
GGGAAATTGGAGGCGTGGTTTTGTGTCTCTGTTCCGTGACTGAGTGAAAG
TTCTCGGTCGTTACTGAAGCTGCCGTTGAGTGACTAACGTCGTCATGTAG
CTTGAAGTTTTTGTCACAAGTGAAAAAGGTGGCAACTTTCAGTTTCATTA
GTGGCTAAATTTTGTTATTTGTTGCTTTGTTGTCATGTGTGACTTGAACA
ATCTCTTTCGTGACTGGAGTTGCCACCAGTGACGGCTAAAGTTTTCGGTT
AGGACTGAAGCTGTCATTCGTGTCGGGAAGTCGTCGACGCGTACACGAGA
CGGTGGTTGATCAGTGGTTGGTTGTCGCTGAAGCAGTTTTTTTGTTACCT
CCATGCTTTTGTCGTCTGCCCTATTTTCGCTACAAACCGTACACATGTAC
CAGTAGGTGTTTAGACCACTTTACAACCACAGAAAAATAACAGGCAGGCA
GGCAGGCAGGCAGGCACACAGGCACACAGGCACACAGGCACACATGCAGC
GAATCAGGCTGTAGTATAGCATCGGCATAAAAACTCCGCCGCGACACACC
ACGACAAAGCCCCCCCCCCCCCCCCCACCCCCCTCCCCTTCTCAGTTCCA
CATCCACCCATCATATCACCCCTGACATCCATCCATCCTCTGCCGCGGAA
ATACACGCAACAACACGATATATGATACACGCAGGTAATGATGGAACCCG
CCACGAAGCAAGTAGAAGAGCTTCGGCTGGCGGAGGAGGAGGCCGAGGAC
TACCTCGTCCGGGAAGCGCAAGGGACGGGACTGTCCGAGCGCGAGACGAG
GGACGTGTGGAACATGCTTCAGGCCGACAAGGAGAGAATTCTTAACCTGA
GCCGAAGGATGGAGGCGGCCCGCGATCGGCTCGCGAAGCTCGGCGTCCGG
GAGCTTGAATAGCTGACTTCGTAAATGGTGATGATACCGAGCTAATGTTG
TCATGGGCCTCATCATGTCATTTTCAGACCATGCGGTTGTTTTGTTATTT
GCGAAGTTGGGTGTGATAGAAAAGAGGATGGAAAGCTGCTACACTACCGT
AGTTTTTTGTGCAGGTAACGTGTTGCAGCAATATTACGGGGACAGCACTG
CAAAATGGAGGTGGTACCCAGCCTTTGGTAGACCCTGCTCTCATTTTTTT
GTCTGTACAGCACTATAACTGTTTTGTTTTATTTTTTCATATGTATACAT
ATGCGTATGCGTGCGTAGGCATGGGCGTGGGCGTGGGTGTGGTTGTGGGC
TTGGGCGTGGGTCTGGTATGCATGGTGCGTGCTTCATTTTCGTTTTTTAC
TTGTGCTGCGGATTTGGGGAGCAAAAATATTGTCGGGTTTAACATTAATT
GATACCAAAATATGCGGTGTAATAGGTTGACCAATCAGAAAACTGCGGGC
ACCTTTTTTCTCTCTTAGCGATCAAGCACTCACTACCTGGTATCAATTAA
TGTTTTTGGTGTTTTTGCCGCTGTGCTCTCTCTTGCGACGTGCTTGACAG
TCGACGATCTGAGCGTATTCGCTGCACACGACTGTTGAATGATGGAGAAT
TTCGCGCGCCTCGAAGCACATGGACCTTTGCGTACTAATGGAAAACGGAG
CTGAAGTTCGTCCGCGTCACATGTTTTGTTTTTTTTTCCTTGAGTTTTAC
TTTTTGTGTGCGAAGGCACAAAGACTGCACATTTGTTTGTACAATATTAG
TGCTGTAGTTTATGTATTCTTCGATGGCTTGCGACCACGGGCTGGCTCTC
GTGATGATGAGTTAAATGGGAGAAATGACAAAACATTCGAAATACAGCAT
TTGTTGTTTTTCTTGATTCGGAAAAATACGTAGGATACCTGACGAGGTTG
TATCATAAACCGCGACACACCACGATCAAACAATGACTCGCCGCTGCTAC
ATGACCAGCTTGGGGAGAGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig6:411470..423039+ >mRNA_P-littoralis_Contig6.112.1 ID=mRNA_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2754bp|location=Sequence derived from alignment at P-littoralis_Contig6:411470..423039+ (Pylaiella littoralis U1_48) ATGGACATTACTCCGCGGCGTGCGGTATCGTCCGCGGCAACCCAGATGCA ACTCGTGCTGCGAAGCGCATCCTTGTATCCACCGCCCACCACTAGCCTCG ATGCTGCTGCTGCGTCTTCGGGCGGCGGCGGCGGCGGCGGTAGCGGCGGC ACGGCGAGCGTCGTCGCCTGCGAGTTGATGGCCGTCAGCGAGAGTCTTGA TCTCGCCATGCTCTTCCGGAGCAATATGATTTGTGCCGTCAGCCTTCTCG ACGTTCCCGACGCTGCCACCCCAGCAGCAGCAGCAGCAGCAGCACGGGCT CCCAGCAGCACCAGCACCAGCACCAGGACGCCACAACGACAACGGCAGCG GGCAGGAGAAGAGGACCCTTTCAACATCGTATCCTTCTCCGCCAACTGCG AACCGAGGCCGGGAGACGACGTTATCCCCAGCGACTCCATCCCGTCTAAA ACGCCCATCAAGGGGCTAGAGTTCTCCCCCTCCGGCCATAGCCTGCTCAT CTGGGGCGAGAGCTACGTCGCCGTTGCCCGCCTGCCGCGCGGCAGCGGCA GCAGCGGCAGCAGCCGCAGCAACATCAGCGGCGTCGGTAACCCAACGCCA AACAAGTACAGCAGTGGGGACGGTAGCAGCAGCAGTAGCAGCAGCAGCGA CAAAAGCGCTAGGTGGAAGTGGACGCTGGTGGACATGTCGGGGTACACCG TGGACGTGATGCGGCAGAGGATCGTGCAAGCCTCCTGGCACCCGGCGAGC GACAGCTGCGTGACGCTGCTGACGGTCGGGAAGGGCGACGTCTACGTCGC CGTCGCGAAAGCGGGGGCCAAGGCGTTTGTCATGCTGCACGTGCCGGGCC GCGAGCGGCCAGAGCAGGTGTTACCCATTCCCGACGGGTCTAGCTTGTCT CCCCCAGTCGCGTTCGCCCACAGCCATTGCGCCGGATGGCAACGCTTCGC TGTGTGGATCGCGAGAAAGGACGGTTCGGTGGGCGCTCTGTGTCCCGTGG TGCCACAGAGCGCCAAGGTGGACGTCGAAGAGCTGTGGGACTTGTGGTCG GCGACATCGGACACTTTGGTGGCCGCCCGATGGGAACAGCAGCAGCAGCA GCAGCAAACCGGGTTGGGCAGTAGCCAGCAGGAGAGCGCACTCGCGGAGG AGGTGTCGCGACTCGAACAACAGCAGGCGTGGCTTAGGGAGACGTTTCCC CACGTGTTCGATGCACAGGACCGAGGCGGCACAGCAGCAGGGCCAGCAGG GGCATTGGCCACCCGAACCCCTCGCCATCTCGTCCTCCAGGATCGCATTC TGGCCGGGCGACCTGAGGAAGACGCCAGCGCCGGCCCCGCGTGCGGCTTG GTCGTGCTCGCGGGGGTGGGCGGGGGCGAAGGCGGAGACGCCGACGAGGC GGCCGTGGCTGCGCCGCCGCCGGTTGCGCTGGCGGTGGCGTACCGGGCGG GGTGTGTAGATATTGCCCTGGTGCCGGCAGGGATCGGTCCCAGAAGGTGG TCCGAACGCGCTGGCCAGCGAGTTTCTTGCGCGACTGCGGCAGGGGAGAC AACGGCCGCCGCCGGAGCGGTGTTGGAGAGCCTGGATCTAGCGGAACGCG TGACGGACAAGACTGCGAGGAGAAGGCAGGGCCTGTCGCTCTCCGTGAGC GCGGGGGCATGGACGTTTCTCGCCGCCACCCCCTGCCGGCTGACCTCCAT CACGGTGACCTGGGCGGGGCGGATCGAGATGGCGGCGCAGCGAGCGAGAC AGCGCGCTGCCGCTGCCGCGCACGGAGTGAGCCGCAGCACCGAACGCCTC GACGGGGATCTACGAGCTTTGCTTCGCGAGAGGCCCGACTCTGCCGTCAA CGAAGTCTTGTTCCTGCCGTCCTCGTCGGCTGGCCGGGTTGTCGGTGTCG TTCCTGTGGCCAGCCCCATTGTCGGGCACTTGGCCATGGCGAGGCTGGCG GGGGGGAAGGTGGAGATGGTCAACTTGGCCGTTATGACGCTGCAGGCAAC CGAGGTGGCCTCTGCCGCCAAACGCGCCGAAGCCCAGGAAAGCCCAGGCA GGGGCGACATGCTCCCCCGCTTTGAGACCGCGCTGCAGAAGGCGGTGAAC GCGCTGGATGAGAGGCGGATGGCCGAGCCGTTGGGTTCCTCCGTCGGCCA CCTTCTCATGTCGCAGCTGGACCAGGAGGGCGTGGGCGTCGTGGAGGAGC AGGCAGACCGCCTCGTGGATGGCGGCATTGTCGTCTTGGAGAAGCTGCAC CTCAAGACAAGCACGCGCCTGGAAACCCTGTGTGAGGTGTACGAGCACCA GGCGGGCCTGACGAAGGGATTGGCGAAGGAAGTAGCTCGGCTGAGGAGTG GGCAGGAGGACAGGGCGGTCACACTGGAGGAGATCAATGACATGGCGGAC GAGCAAAGAGCCAGGTCGGCTGGTGTTCTGGCGGTGGTCCAAGCGACGCG ACCGGATGTTTCTCCCGCTGAGCGCGCGTTTATGTCGGAGATGAAGGAAA TGGAGAATTACGCCGATCGGCAGCAGGTAATGATGGAACCCGCCACGAAG CAAGTAGAAGAGCTTCGGCTGGCGGAGGAGGAGGCCGAGGACTACCTCGT CCGGGAAGCGCAAGGGACGGGACTGTCCGAGCGCGAGACGAGGGACGTGT GGAACATGCTTCAGGCCGACAAGGAGAGAATTCTTAACCTGAGCCGAAGG ATGGAGGCGGCCCGCGATCGGCTCGCGAAGCTCGGCGTCCGGGAGCTTGA ATAG back to top
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