mRNA_P-littoralis_Contig6.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: D7G8B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B1_ECTSI) HSP 1 Score: 201 bits (512), Expect = 2.120e-57 Identity = 103/138 (74.64%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 7 RSEGGGG-----AVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKNVSA 405
R EG GG AVV+FG CFVGQSV+RRVSLRNTSLLPAKFGF+ A+VD+QPADGFGVLLPGE RW+E TFSPLSSVSH ST+SFRTSLGQ+T++RC G GV+PV+ LSHTVL LAP C GDTV ASIF NVSA
Sbjct: 1048 RGEGEGGVGGSEAVVNFGPCFVGQSVTRRVSLRNTSLLPAKFGFIGNPAEVDLQPADGFGVLLPGEERWIEATFSPLSSVSHVSTVSFRTSLGQSTSVRCLGFGVDPVIKLSHTVLSLAPACSGDTVTASIFVNNVSA 1185
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: A0A7S1TZE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZE1_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.540e-28 Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 22 GGAVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKNVS 402
G + FG+ +V Q S R+ + N S+LP KFGFV ++++QPADGFGVLLPGE R + VTFSP ++VSH+ ++ RT+L IR RG GV+ V +SHTVL L+P GD SIF KNV+
Sbjct: 775 GATELDFGRVYVTQGASLRMVVCNPSMLPQKFGFVDLPRELEVQPADGFGVLLPGEEREVTVTFSPYAAVSHELSLQLRTNLLVHKRIRVRGQGVDCPVDVSHTVLRLSPTYPGDACIESIFLKNVT 901
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: F0Y4M8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4M8_AURAN) HSP 1 Score: 113 bits (282), Expect = 2.030e-26 Identity = 57/122 (46.72%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 40 FGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKNVSA 405
+G C+V +++S V L N S LP KFGFV+ +A+VD+QP DGFGVLLP E R ++V F P+S+V+ D ++ RT++ T I+ RG G+EP + S TVL P GD V AS+ + SA
Sbjct: 1083 YGPCYVTEALSAPVVLTNESALPQKFGFVNLSAEVDVQPNDGFGVLLPRESRTVDVIFKPVSAVNVDLNLTMRTTMNNTYAIKVRGRGLEPALKFSFTVLKFPPASPGDRVVASVLVSHPSA 1204
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: A0A7S2APH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APH7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.410e-20 Identity = 48/124 (38.71%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 34 VSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKNVSA 405
++F C++ +S +R+ LRN S LP KFGF+ +VD++P DGFG LLP E + +++ F P + + + +T++G+ + RG GV+P +SLSH+V + P GD V A+I N SA
Sbjct: 275 LNFENCYITESKVKRLVLRNESALPQKFGFIQLPPEVDVKPGDGFGSLLPHEAQTVDIHFRPSIAGATKLKLEMKTTMGKIYKVLVRGKGVDPPLSLSHSVADMVPAAPGDRVYAAIVVFNPSA 398
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: A0A0M0JCK6_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCK6_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 4.310e-20 Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 40 FGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKNVS 402
FG C + S +S+RN S LP +FGF+ ++D+QP D G +LPGE V FSP + ++H T++ RTSL +T ++C G G++P+++LS L L P GDT + N S
Sbjct: 929 FGSCPLNASRILELSIRNVSALPQRFGFLPLPKELDVQPGDAIGTILPGETLVRRVLFSPTAEITHKITLTCRTSLNRTYHLKCVGTGIQPILTLSSVKLSLPPTVEGDTSFGDVTLTNSS 1049
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: A0A7S3MKD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MKD6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.280e-18 Identity = 42/123 (34.15%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 28 AVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKN 396
+++ FG+ ++GQ +R+++++NTS+LP K FV + +QP DGF +LLP E + E++F P SS++++ ++ TS T TI+ GVEP +S S +V+ + G+ V ++ +N
Sbjct: 1012 SLLEFGKVYIGQKSTRKITIKNTSMLPQKTAFVRLRKEFLVQPNDGFALLLPNESQEFEISFGPQSSINYEVNVTLATSFNDTYTIKVIAEGVEPPLSFSSSVVQMRTTYPGERVLENVTVRN 1134
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: UPI00046258F4 (cilia- and flagella-associated protein 74-like n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI00046258F4) HSP 1 Score: 85.1 bits (209), Expect = 1.130e-17 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 28 AVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKN 396
A V FG C + ++V V+L N S+LP +FGFV V++QP DGFGVLLP E ++V F P + + ++ +T + + + C+ GV P + LSH+ + L D +A++F N
Sbjct: 25 AEVDFGYCSIFEAVQTTVTLTNKSILPQEFGFVGLQEFVEVQPNDGFGVLLPLESLSLDVIFKPKKAKEYSFHLTCKTEINRQFKLSCKAIGVHPPLELSHSFVQFPATALNDVSSATLFIIN 147
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: A0A7J7JLZ2_BUGNE (KIAA1751 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JLZ2_BUGNE) HSP 1 Score: 87.8 bits (216), Expect = 1.490e-17 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 34 VSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKN 396
+ FG C + +SV + V L N S+LP +FGF+ VDIQP DGFG+LLP E +++ FSP + ++ + ++ + + IRC+G GV P + LS V+H L D +I+ N
Sbjct: 107 IDFGHCTIYESVKQTVQLTNKSILPQEFGFMGLPEYVDIQPNDGFGLLLPEETIDLDIIFSPPKAKNYTFELCCKSLINREFKIRCKGVGVHPPLELSQQVVHFKATALNDYSLNNIYVIN 227
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: UPI001C4C4322 (cilia- and flagella-associated protein 74 isoform X1 n=2 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4C4322) HSP 1 Score: 87.8 bits (216), Expect = 1.570e-17 Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 34 VSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKN 396
V FG C + ++V ++L N S+LP +FGFV +++QP DGFG+LLP E ++V F P + + ++ +T + + + C+G GV P + LSH+++ + L D A++F N
Sbjct: 988 VDFGYCSIYEAVQTTITLTNKSILPQEFGFVGLQEFIEVQPNDGFGILLPLETLSLDVLFKPKKAKEYSFHLTCKTEINRKFKLSCKGIGVHPPLELSHSLVQFSATALNDVSTATLFILN 1108
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Match: UPI000529D555 (uncharacterized protein CFAP74 n=1 Tax=Chlamydotis macqueenii TaxID=187382 RepID=UPI000529D555) HSP 1 Score: 85.1 bits (209), Expect = 1.380e-16 Identity = 42/123 (34.15%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 28 AVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIQPADGFGVLLPGEVRWMEVTFSPLSSVSHDSTMSFRTSLGQTTTIRCRGHGVEPVVSLSHTVLHLAPVCLGDTVAASIFAKN 396
A ++FG C + ++V V L N S+LP +FGFV V+IQP DGFG+LLP E +++ F + + ++ +T + + + CR GV P + LSH+++ A L D A+++ N
Sbjct: 981 AQINFGYCTIYEAVQANVMLTNKSILPQEFGFVGLPEFVEIQPNDGFGILLPLESLTLDIIFKANKAKEYSFELTCKTEINRQFKLSCRAVGVHPPLELSHSLVQFAATALNDVSTATLYVMN 1103 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.11.1 >prot_P-littoralis_Contig6.11.1 ID=prot_P-littoralis_Contig6.11.1|Name=mRNA_P-littoralis_Contig6.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp ISRSEGGGGAVVSFGQCFVGQSVSRRVSLRNTSLLPAKFGFVSKAAQVDIback to top mRNA from alignment at P-littoralis_Contig6:53841..54879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.11.1 ID=mRNA_P-littoralis_Contig6.11.1|Name=mRNA_P-littoralis_Contig6.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1039bp|location=Sequence derived from alignment at P-littoralis_Contig6:53841..54879- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:53841..54879- >mRNA_P-littoralis_Contig6.11.1 ID=mRNA_P-littoralis_Contig6.11.1|Name=mRNA_P-littoralis_Contig6.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=405bp|location=Sequence derived from alignment at P-littoralis_Contig6:53841..54879- (Pylaiella littoralis U1_48)back to top |