mRNA_P-littoralis_Contig6.10.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: D7G8B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B1_ECTSI) HSP 1 Score: 172 bits (437), Expect = 6.150e-48 Identity = 82/98 (83.67%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 1 SPSLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPFGPRPPSNINHCEAFALVPCEGGVPPGESVTVKAVFS 294
SPSLGKSIRV +RGEGV+PVL M PADGRLDMGHVLEGDT ERE+KL NDSVFPLRY T PFGPRP SN+NH EAF+LVPCEGGVPPGESVTV A+FS
Sbjct: 1490 SPSLGKSIRVCVRGEGVKPVLRMTPADGRLDMGHVLEGDTIEREVKLLNDSVFPLRYATAPFGPRPSSNVNHLEAFSLVPCEGGVPPGESVTVTAIFS 1587
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A024UTE2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTE2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.790e-15 Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 19 SIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPFGPRPPSNINHCEAFALVPCEGGVPPGESVTVKAVFS 294
++RV L GEGV PVLS+ PADG++D VL + E L N S+FPL+Y N N F +P E +PPGE+ V+A+FS
Sbjct: 1104 NLRVSLHGEGVSPVLSITPADGKVDFKPVLAREKGYTEFSLLNSSLFPLKYIIKSLDNGSHPNFNQTSVFTCIPNEASIPPGETQVVRAIFS 1195
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A6G0XXY8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXY8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 6.280e-14 Identity = 40/92 (43.48%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 19 SIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPFGPRPPSNINHCEAFALVPCEGGVPPGESVTVKAVFS 294
S+ VRL GEGV PVL +VP DGR+D VL + + L N S FPL Y P SN NH F+ VP +PPG + +A FS
Sbjct: 1068 SLSVRLHGEGVSPVLGIVPPDGRIDFKPVLAREKGFTDFTLLNTSQFPLTYVLKPLEEHAHSNFNHTLVFSCVPNAATIPPGGTQIARATFS 1159
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: W4GLF0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLF0_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 8.580e-14 Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 22 IRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPF--GPRPPSNINHCEAFALVPCEGGVPPGESVTVKAVFS 294
+RV L GEGV PVLS+ PADG++ VL + E L N S+FPL+YT G P N N F+ +P E +PPGE+ V+A FS
Sbjct: 1111 MRVSLHGEGVSPVLSITPADGKIHFKPVLAREKGYTEFSLLNSSLFPLKYTIKSLDNGTTHP-NFNQTSVFSCIPNEASIPPGETQVVRATFS 1202
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A485KUG8_9STRA (Aste57867_12034 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUG8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.190e-13 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 28 VRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPFGPRPPS-NINHCEAFALVPCEGGVPPGESVTVKAVFS 294
V L GEGV PVLS+ PADG++D VL + E L N S FPL+Y P N N F +P E +PPGE+ V+AVF+
Sbjct: 1144 VTLAGEGVSPVLSITPADGKIDFKPVLAREKGTTEFSLLNSSQFPLKYIIKPLDVADAHPNFNQTNVFTCIPNEASIPPGETQVVRAVFN 1233
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A6A3UMM1_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UMM1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.220e-10 Identity = 41/108 (37.96%), Postives = 52/108 (48.15%), Query Frame = 1
Query: 7 SLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPF-----GPRPP--------SNINHCEAFALVPCEGGVPPGESVTVKAVF 291
+LG +IRVRLRGEG+ P L++ PADG LD VL + REL L N S FPL ++ P G P + F P +P SV V+ VF
Sbjct: 1251 ALGVNIRVRLRGEGINPSLTLTPADGSLDFQDVLARTRSVRELVLANGSAFPLAFSIVPLDDMKAGTMAPGAKEEDSMTTSTGLPVFTFSPTNAIIPENGSVMVQVVF 1358
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: G4ZVK7_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZVK7_PHYSP) HSP 1 Score: 60.8 bits (146), Expect = 1.190e-8 Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 1
Query: 7 SLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYTTTPFGPRPPSNINHCEA---FALVPCEGGVPPGESVTVKAVF 291
+LG +IRVRLRGEG+ P L++ PADG LD VL + R+L L N S FPL ++ ++ F P +P S+TV F
Sbjct: 1044 ALGVNIRVRLRGEGINPSLTLTPADGSLDFQDVLARTRSVRDLVLANGSAFPLAFSIEALVKEDGDSMTTSTGLPVFTFSPTSAIIPENGSITVHVGF 1141
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A225WWT8_9STRA (Flagellar associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWT8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.640e-8 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 7 SLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYT 174
++G +IRVRLRGEG+ P LS+ P DG+LD VL REL L N S FPL ++
Sbjct: 1003 AVGVNIRVRLRGEGINPSLSISPVDGKLDFQDVLARTRNVRELVLANGSTFPLAFS 1058
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A329RY00_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RY00_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 5.020e-7 Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 1
Query: 7 SLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYT 174
+LG +IRV+LRG G+ P LS+ P DG LD VL REL L N S FPL ++
Sbjct: 1220 ALGVNIRVKLRGVGINPSLSLTPEDGNLDFQDVLARTRNVRELVLTNGSAFPLAFS 1275
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Match: A0A3L6VDD3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VDD3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.240e-6 Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 22 IRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDSVFPLRYT 174
+RV L GEGV PVLS+ PADG++ VL + E L N S+FPL+YT
Sbjct: 482 MRVSLHGEGVSPVLSITPADGKIHFKPVLAREKGYTEFSLLNSSLFPLKYT 532 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.10.1 >prot_P-littoralis_Contig6.10.1 ID=prot_P-littoralis_Contig6.10.1|Name=mRNA_P-littoralis_Contig6.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp SPSLGKSIRVRLRGEGVRPVLSMVPADGRLDMGHVLEGDTAERELKLQNDback to top mRNA from alignment at P-littoralis_Contig6:47992..49628- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.10.1 ID=mRNA_P-littoralis_Contig6.10.1|Name=mRNA_P-littoralis_Contig6.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1637bp|location=Sequence derived from alignment at P-littoralis_Contig6:47992..49628- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:47992..49628- >mRNA_P-littoralis_Contig6.10.1 ID=mRNA_P-littoralis_Contig6.10.1|Name=mRNA_P-littoralis_Contig6.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig6:47992..49628- (Pylaiella littoralis U1_48)back to top |