mRNA_P-littoralis_Contig210.41.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 320 bits (820), Expect = 3.660e-107 Identity = 149/251 (59.36%), Postives = 190/251 (75.70%), Query Frame = 1
Query: 7 AAAEWTYRATSTSGEEPYGPSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLEFNRVFCRSSELTFQADYAVY---FDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNVLELGGNSTTETFNMAVYDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVFYI 750
AAAEWTYR TST+G++PYGPSDW KGYPDC QSPI+LA DL T+ S Y L+F C+S EL FQAD V+ F GC +VP + ++GE YNLLQ HIHSPSEH++G EH AEIH VHVKEGT D+LLVVG+L+D + YG+NV +E LW+VL++G +T E F +YD++P +P +SHYMGSLTTPPCT+GVKWIVM++ TM K QL+++R +VA + SKVDE GNTNRP Q+ N R +F++
Sbjct: 38 AAAEWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 304 bits (778), Expect = 1.030e-100 Identity = 144/254 (56.69%), Postives = 183/254 (72.05%), Query Frame = 1
Query: 1 DTAAAEWTYRATSTSGEEPYGPSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLEFNRVFCRSSELTFQADYAVY---FDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNVLELGGNSTTETFNMAVYDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVFYIA 753
D AAAEWTYRAT GEEPYGP DW GYPDCA +Q+PIN+A D+M + + F C S+EL F++D+AV+ F GC + P L ++GETYNLLQFHIHSPSEH++G EH AEIH+VH+K+ TTD LLVVGI+++VS YG NV LE +WNV++L + E F A Y +LP PS++ Y GSLTTPPCT+GV+WI+M+E + M QL++YR AVA + GSKV E G TNRP Q NGRDV Y++
Sbjct: 41 DEAAAEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYVS 294
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 234 bits (597), Expect = 2.710e-73 Identity = 116/251 (46.22%), Postives = 165/251 (65.74%), Query Frame = 1
Query: 16 EWTYRATSTSGEEPYGPSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLEFNRVFCRSSELTFQADYAVY---FDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKE---GTTDELLVVGILYDVSQYGNNVGLERLWNVLELGGNSTTETFNMAVYDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVFYI 750
+WTYR S GE PY PSDW GYPDC + QSPINL+ ++ T+ +++ LE C S EL F+A+ V+ F C + +L+++G Y+LLQ HIHSPSEH++ HDAEIH+VH ++ GT ELLV+G+ D ++G NV LE LW+VL G+ + Y+++P D +YSHYMGSLTTPPC++ V+W+VM+ + +G QL+ +R++VA+ S+VDE NTNRP Q NGR V+ +
Sbjct: 48 DWTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVL---GSGAKPRGVINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 194 bits (492), Expect = 1.690e-59 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 1
Query: 325 LMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNVLELGGNSTTETFNMAVYDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVFYI 750
++G EH+AEIH VHVK GT D+LLV+G+L+D +QYG+NV +E LW+VL++G +T E F VYD++P +P +SHYMGSLTTPPCT+GVKWIVM++ TMGK QL+++R +VA + SKVDE GNTNRP Q+ N RD+F++
Sbjct: 1 MIGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 151 bits (381), Expect = 3.040e-41 Identity = 99/261 (37.93%), Postives = 136/261 (52.11%), Query Frame = 1
Query: 73 WSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLE-------FNRVFCRSSELTFQAD---YAVYFDG-CPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVG---LERLWNVL-----------ELGGNST------TETFNMAV------YDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVF 744
W YPDC RQSPIN+A D++T +D L F+ C +L ++AD + V FDG C P++T G +NLLQFH+HS SEH++G G +DAEIH VH L VVG++ +S +NVG + W + E+ ST T + +M+ Y +LP D +Y +Y+GSLTTPPC++ V WIVM E T+ QLE +R + VD +GN RP Q NGR V+
Sbjct: 2 WGALYPDCLGVRQSPINIARDIVT----TDCTLAPVTGAFVFDMGACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVM--ISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI) HSP 1 Score: 148 bits (374), Expect = 2.450e-39 Identity = 102/290 (35.17%), Postives = 141/290 (48.62%), Query Frame = 1
Query: 4 TAAAEWTYRATSTSGEE-PYGPSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLE-------FNRVFCRSSELTFQAD---YAVYFDG-CPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNVLE----LGG---------------------NSTTETFNMAV------YDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVF 744
TA +W+Y E P W YPDC RQSPIN+A D++T +D L F+ C +L ++AD + V FDG C P++T G +NLLQFH+HS SEH++G G +DAEIH VH L VVG++ +S +N+G E + G +S + +M+ Y +LP D +Y +Y+GSLTTPPC++ V WIVM E T+ QLE +R + VD +GN RP Q NGR V+
Sbjct: 54 TAEFDWSYNYECNYEEHGQVAPDMWGYLYPDCLGVRQSPINIARDIVT----TDCTLAPVTGAFVFDMGMCMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVM--ISSTSDNIGNLEFTKYAEHMAYVSGKQKYASEIMETDATMAPAATPSSMASSTSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 337
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK) HSP 1 Score: 121 bits (303), Expect = 1.790e-29 Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 1
Query: 64 PSDWSKGYPDCAMNRQSPINL-----ATDLMTMGNYSDYGLEFNRVFCRSSELTFQADYAVYFDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVK-EGTTDELLVVGILYDVSQYGNNVGLERLWN-----------VLELGGNSTTETFNMAVYDVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNE 615
P +W DCA QSPIN+ ++DL + + N V+ + T++ D C + TW+G Y L+QFH HSPSE+ +G G DAE+H+VH EG ELLV+G+++DV YG N + WN V+ L N T ++LP PSY H+ GSLTTPPC++GV WI+M++
Sbjct: 95 PENWDSVNDDCAGTSQSPINVVQASPSSDLSGL-QLTKAKSSCNAVYLIDNYHTWKVDMT----SCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHASAEG---ELLVIGVMFDVVDYGGNHFFSQFWNNTWSDDPDWYRVVSLESNLDPYT------EILPATPSYYHWNGSLTTPPCSEGVTWILMSQ 281
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK) HSP 1 Score: 120 bits (300), Expect = 1.870e-29 Identity = 75/201 (37.31%), Postives = 107/201 (53.23%), Query Frame = 1
Query: 46 GEEPYGPSDWSKGYPDCAMNRQSPINL--ATDLMTMGNYSDYGLEFNRVFCRSSELTFQAD----YAVYFDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNV----LELGGNSTTETFNMAVY-DVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNE 615
GEE P +W DCA QSPIN+ A+ T+ S L N C +L + D + V C + TW Y L+QFH HSPSE+ +G G DAE+H+VH + LLV+G+++DV YG N + WN + G + + + + Y ++LP D SY H+ GSLTTPPC++GV WI+M++
Sbjct: 47 GEEACSPENWYAYAEDCAGESQSPINVVQASPSTTL---SQLVLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 239
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK) HSP 1 Score: 119 bits (297), Expect = 9.510e-29 Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 1
Query: 64 PSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYGLEFNRVFCRSSELTFQAD----YAVYFDGCPNVPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVGLERLWNV----LELGGNSTTETFNMAVY-DVLPDDPSYSHYMGSLTTPPCTQGVKWIVMNE 615
P +W + DC QSPIN+ + + S L N C +L + D + V C + TW G Y L+QFH HSPSE+ +G G DAE+H+VH + LLV+G+++DV YG N + WN + G + + + + Y ++LP D SY H+ GSLTTPPC++GV WI+M++
Sbjct: 79 PENWGEVNRDCEGENQSPINVVMAQKSK-SLSQLQLNKNNEDC---DLLYLVDNYHTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHADADSN--LLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMSQ 265
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Match: A0A662WYL3_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYL3_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.990e-27 Identity = 86/267 (32.21%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 19 WTYRATSTSGEEPYGPSDWSKGYPDCAMNRQSPINLATDLMTMGNYSDYG-----LEFNRVFCRSSELTFQADYAVYFDGCPN--VPSLTWEGETYNLLQFHIHSPSEHLMGYGEHDAEIHMVHVKEGTTDELLVVGILYDVSQYGNNVG-LERLWNVLELG-----------GNSTTETFNMAVY--DVLPDDPSYSH---YMGSLTTPPCTQGVKWIVMNEVSTMGKGQLEDYREAVASYPGSKVDEFGNTNRPAQTPNGRDVFY 747
W YR T++ E GPSDW YP C + QSP+N+ ++ +SD+G L+F+ R + T + Y +G N V S+ ++G +Y+L QFH+HS SEH + +D E+H VH + G + LLV +L + G + LWN + G G S + D+L S SH Y GSLTTPPC++ V W V+N ++ +L+ + A P + + NRP Q NGR++ Y
Sbjct: 2083 WGYRETTS---EELGPSDWKNSYPSCGGSHQSPVNIPVRELS---HSDWGMPYAPLKFSGDCERFTMRTLEDLYKWEINGDENCNVKSINFDGRSYSLAQFHLHSTSEHTLDDYHYDGELHFVHKEVGGSGNLLVTSLLLNAQPIEMENGFIGNLWNAMNTGDAAVDLEQIGYGCSREHALFCRINYADMLNGLVSKSHLFNYNGSLTTPPCSEIVDWWVLNNPISITYDELKLMKSLYAKRPSANNS---SDNRPTQPLNGREIMY 2340 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig210.41.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig210.41.2 >prot_P-littoralis_Contig210.41.2 ID=prot_P-littoralis_Contig210.41.2|Name=mRNA_P-littoralis_Contig210.41.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp DTAAAEWTYRATSTSGEEPYGPSDWSKGYPDCAMNRQSPINLATDLMTMGback to top mRNA from alignment at P-littoralis_Contig210:193118..204446- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig210.41.2 ID=mRNA_P-littoralis_Contig210.41.2|Name=mRNA_P-littoralis_Contig210.41.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11329bp|location=Sequence derived from alignment at P-littoralis_Contig210:193118..204446- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig210:193118..204446- >mRNA_P-littoralis_Contig210.41.2 ID=mRNA_P-littoralis_Contig210.41.2|Name=mRNA_P-littoralis_Contig210.41.2|organism=Pylaiella littoralis U1_48|type=CDS|length=756bp|location=Sequence derived from alignment at P-littoralis_Contig210:193118..204446- (Pylaiella littoralis U1_48)back to top |