mRNA_P-littoralis_Contig209.4.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig209.4.5
Unique NamemRNA_P-littoralis_Contig209.4.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 5.040e-190
Identity = 279/421 (66.27%), Postives = 313/421 (74.35%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKF-NWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATG--------------------------GKEKERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            D+++AL + INDQRK H GCG+  VMNKLLE+KPD LGGL A    EE LA+K KF +WYQRFRKR + SIRRRTSVG +LPKGHEGMAWATLMKLR+AL+                                     F++LGNMDQTPVQ+EMP ETTL++ G KDARIATG                          GKEKERFTLCLAV+ADG KVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRE KLWIK+SW++RPNNGS ++QR CILVLDDFKCHKDD FIA  KR+ NTIVIFIPGGLTPLLQ LDRMLNKQMK LLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKICGL+LALDG ED
Sbjct:   63 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 1.500e-186
Identity = 277/389 (71.21%), Postives = 306/389 (78.66%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKF-NWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLA 1050
            D+++AL + INDQRK H GCG+   MNKLLE+KPDALGGL A    EE LA   KF +WYQRF KR + SIRRRTSVGQKLPKGHEGMAWATLMKLR+AL+                                     FEELGNMDQTPVQHEMP ETTL+  G KDARIATGGKEKERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRECKLWIK+SW++RPNNGS ++QR CILVLDDFKCHKDD FIA  KR+ NTIVIFIPGGL PL Q LDRMLNKQMK LLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE+VKTCFKICGL+LA
Sbjct:  130 DIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 1.150e-175
Identity = 265/403 (65.76%), Postives = 292/403 (72.46%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKFN-WYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRV--------RPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            D +QAL D IN+QRK H GCGN EVMNKLLE+KPDALGG+PAN+  EE LA+KVKFN WYQRFRKR   SIRRR SVGQKLPKG+EGMAWAT+ KLREALV                                     FEELGNMDQTPVQHEMP ETTL+  G KDARI+TGGKEKERFTL LAV ADGK V   IIFKGTPFIP TV+G G++T PRKNS+A E+ P NR K GHP  GMSFGVQEKSW   +EC  WI  SW++        RPNNGS ++QR CILVLDDFKCHKD+ FIA   RD NTIVIFIPGGLTPLLQ LDRMLNKQMK LLRG YT +SA A  D ++GKL PP RG VSTWCK+AW  +T E V TCFKICGL+LALDG ED
Sbjct:  130 DAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 1.230e-172
Identity = 256/394 (64.97%), Postives = 286/394 (72.59%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKFNWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            D+++AL + INDQRK H GCG+  VMNKLLE+KPDA GGL A    EE LA+                +IRR TSVGQKLPKGHEGMAWATLMKLR+AL+                                     FEELGNMDQTPVQHE P E   +    +  R       +ERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRECKLWIK+SW++RPNNGS ++QR CILVLDDFKCHKDD FIA  KR+ NTIVIFIPGGLTPLLQ LDRMLNKQMK LLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE  KTCFKICGL+LALDG ED
Sbjct:  117 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDAAGGLTAKPKPEEALAF----------------NIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSED 490          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 493 bits (1268), Expect = 8.450e-171
Identity = 254/370 (68.65%), Postives = 278/370 (75.14%), Query Frame = 1
Query:   76 MNKLLEMKPDALGGLPANSTAEEGLAYKVKFN-WYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            MNKLLE+KPDALGG+PAN+  EE LA+KVKFN WYQRFRKR   SIRRRTSVGQKLPKG EGMAWAT+MKLREALV                                     FEELGNMDQTPVQHE+P ETTL++ G KDARI+TGGKEKERFTL LAV ADGKKV  RIIFKGTPF P TV+G G++T PRKNS+A EI P NR K GHP  GMSFGVQEKSW D REC  WI  SW++RPNNGS ++QR CILVLDDFKCHKD+ FIA  KRD NTIVIFIPG LTPLLQ LDRMLNKQMK LLR  YT +SASA  D ++GKL PP RG VSTWCK+AW + TPE VKTCF ICGL+LALDG ED
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 1.320e-164
Identity = 251/376 (66.76%), Postives = 279/376 (74.20%), Query Frame = 1
Query:   61 GNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKFN-WYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGG-KEKERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            GN EVMNKLLE+KPDALGG+PAN+  EE + +K KFN WYQRFRKR   SIRRRTSVGQKLPKG+EGMAWAT+MKL EALV                                     FEE+GNMDQ PVQHEMP ETTL + G KDARI+TGG  EKERFTL LAVTADGKKV  RIIF+GTPFIP TV+G G++T+PRKN +A E+ P NR K GHP  GMSFGVQEKSW D REC  WI  SW++RPNNGS ++QR  ILVLDDFKCH D+ FIA  KRD NTIVIFIPGGLTPLLQ LDRMLNKQMK LLRG YT +S SA  D ++GKL PP RG VSTWCK+AW +ITPE VKTC KICGL+LALDG ED
Sbjct:  190 GNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 8.920e-164
Identity = 251/399 (62.91%), Postives = 278/399 (69.67%), Query Frame = 1
Query:   76 MNKLLEMKPDALGGLPANSTAEEGLAYKVKFN-WYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMV-----------------------------KTCFKICGLSLALDGRED 1068
            MNKLLE+KP+ALGG+ AN+   E LA+KVK N WYQRFRKR   SIRRRTSVGQKLPKG+EGMAWAT+MKLREALV                                     F+ELGNMDQTPVQHEMP ETTL++ G KDARI+TGGKEKERFTL LAV ADGKKV  RIIFKGTPFIP  V+G G++T PRKNS+A EI P NR K  HP  GMSFGVQEKSW D REC  WI  SW++RPNNGS ++QR CILVLDDFKCHKD+ +IA  KRD NTIVI IPGGLTPLLQ LDRMLNKQMK LLRG YT +SASA  D ++GKL PP RG VSTWCK+AW +ITPE V                             KTCFKICGL+LALDG ED
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 1.890e-160
Identity = 247/395 (62.53%), Postives = 285/395 (72.15%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKF-NWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREAL-------------------------------------VFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIPTVTGV-GRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            +V+Q L D IN+QR++H GCG+ EVMNKLLE+KPDALGGL A ++AEE LA++ KF NWY RFR+R  LSIRRRTSVGQKLP G+EG+A+ATLMKLR AL                                     VFEELGNMDQTPVQ EMP ETTL++ G KDARI+TGGKEKERFTLCLAV ADG KVP+RIIFKG PFIP  T   G+ TQPRK SIAAE+LP N+  FG+P+ GMSFGVQE+SW D  EC LW+ ESW  RPN+GS +KQR  ILVLDDF+              TNT VI IPGGLTPLLQ LDRML+K+MK L+R  YT++ ASA  DPKTGKL PPGRG VSTWCK++WA IT E VK CFK+CGL+LALDG ED
Sbjct:  149 EVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 4.730e-158
Identity = 254/408 (62.25%), Postives = 284/408 (69.61%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKFN-WYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQ--------------EKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRE 1065
            D +QAL D +N+QRKQH  CGN EVMNKLLE+KPDALGG+  N+  EE LA+KVKFN WYQRFRKR   SIRRRTSVGQKLPKG+EGMAWAT+MKLREALV                                     FEELGNMDQTPVQHEMP ETTL++ G KDARI+TGG+EKERFTL LAV ADGKKV  RIIFKGTPFIP TV+G  ++T PRKNS+A EI   N  + G   GG    V               EKSW D REC  WI  SW++RPNNGS ++QR CILVLDDFKCHKD+ FIA  KR   T VIFIPGGLT LLQ LDRMLNKQMK LLRG YT  SASA  D ++GKL PP  G VSTWCK+AW +IT + V+TCFKICGL+LALDG E
Sbjct:  158 DAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCH-GGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 3.250e-156
Identity = 244/395 (61.77%), Postives = 269/395 (68.10%), Query Frame = 1
Query:    1 DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGLAYKVKF-NWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV-------------------------------------FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKCHKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGRED 1068
            D+++AL + INDQRK H GC                          EE LA+K KF +WYQRFRKR + +IRRRTSVGQKLPKGHEGMAWATLMKLR+AL+                                     FEELGNMDQTPVQHE  A                GGKEKERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+ GMSFGVQEKSWCDLRECKLWIK SW++RPNNGS ++QR CILVLDDFKCHKDD FIA  KR+ NTIVIFIPGGLTPLLQ LDRMLNKQMK LL              PKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKICGL+LALDG ED
Sbjct:  143 DIEEALVEFINDQRKHHVGC--------------------------EEALAFKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDA----------------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 495          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.4.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE5.040e-19066.27DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.500e-18671.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.150e-17565.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE1.230e-17264.97DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE8.450e-17168.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.320e-16466.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE8.920e-16462.91DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.890e-16062.53DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE4.730e-15862.25DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE3.250e-15661.77DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig209contigP-littoralis_Contig209:37169..38690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1068
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.1e-115
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1068
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790013.198169-CDS-P-littoralis_Contig209:37168..378301680790013.198169-CDS-P-littoralis_Contig209:37168..37830Pylaiella littoralis U1_48CDSP-littoralis_Contig209 37169..37830 -
1680790013.2126813-CDS-P-littoralis_Contig209:38173..382821680790013.2126813-CDS-P-littoralis_Contig209:38173..38282Pylaiella littoralis U1_48CDSP-littoralis_Contig209 38174..38282 -
1680790013.2264044-CDS-P-littoralis_Contig209:38393..386901680790013.2264044-CDS-P-littoralis_Contig209:38393..38690Pylaiella littoralis U1_48CDSP-littoralis_Contig209 38394..38690 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig209.4.5prot_P-littoralis_Contig209.4.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig209 37169..38690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig209.4.5

>prot_P-littoralis_Contig209.4.5 ID=prot_P-littoralis_Contig209.4.5|Name=mRNA_P-littoralis_Contig209.4.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=356bp
DVDQALADCINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANSTAEEGL
AYKVKFNWYQRFRKRQRLSIRRRTSVGQKLPKGHEGMAWATLMKLREALV
FEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTA
DGKKVPVRIIFKGTPFIPTVTGVGRATQPRKNSIAAEILPQNRRKFGHPM
GGMSFGVQEKSWCDLRECKLWIKESWRVRPNNGSFLKQRACILVLDDFKC
HKDDEFIAFFKRDTNTIVIFIPGGLTPLLQSLDRMLNKQMKWLLRGMYTK
HSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLA
LDGRED
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mRNA from alignment at P-littoralis_Contig209:37169..38690-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig209.4.5 ID=mRNA_P-littoralis_Contig209.4.5|Name=mRNA_P-littoralis_Contig209.4.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=1522bp|location=Sequence derived from alignment at P-littoralis_Contig209:37169..38690- (Pylaiella littoralis U1_48)
GACGTCGACCAAGCTTTGGCGGACTGCATCAACGACCAGCGCAAGCAGCA CTGCGGCTGTGGCAACGCAGAGGTCATGAACAAGCTGCTGGAGATGAAGC CCGACGCCCTAGGCGGGCTACCAGCCAATTCGACGGCGGAAGAGGGGCTG GCGTACAAGGTCAAGTTCAACTGGTACCAACGTTTTCGCAAGCGGCAGAG GCTCAGCATCCGCCGACGTACCAGCGTGGGTCAAAAGCTACCGAAGGGAC ACGAGGGCATGGCGTGGGCGACGCTGATGAAGCTGCGCGAGGCTCTCGTG AAGCGCGCTGCGGAGATCTACGCTCGGCGCCACCCCCCTGCACCTGGTGA GAGCTCCGTCGACGGGAAGGACCTGACTTCCGAGCAGCTGGAGTCGGTCG CCGAAGAGGTGTTCGAAGAACTCGGCAACATGGACCAGACGCCAGTCCAG CACGAGATGCCGGCGGAGACGACGCTGCAGCAGCGCGGTGATAAGGACGC TCGCATTGCCACAGGAGGTGAGAGTGAACTGCGGTGCTGCGAGTTGTGTA CGAGGAGTACCTACATGTTTCCCTGTTCCTATCAAGTATTGGCGTCTTCG TTGTTGCAGGTTTCTTTTTGGTCTTGGTGTTTTGTACTCCGTATTTTTTA GTTCTGGGAAATCCGTACGTCTACAATATGCAGTCATGTCAACACCTCTT TCCAATGCAGTTTTTGATCGTGGTGTTTTTTCCTCTCTCTTGGAAATCCG TACGTGTACCGTCTGCAGCCATCCATGTCAAGCGCCATCTGCTGGTCAGC ATTGTTCAAACCCCTCCTCCTACTCGCCTACCCCCTACCGTCGTGTGCAC CCCTCCCCAGGAAAGGAGAAGGAACGCTTCACGCTTTGCCTTGCTGTCAC GGCGGACGGGAAGAAGGTTCCGGTGCGCATCATCTTTAAGGGGACGCCGT TCATCCCGACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAAT TCCATCGCGGCTGAGATCCTTCCCCAAAACCGTCGCAAGTTCGGGCACCC CATGGGAGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGTGCGACCTGC GGGAGTGCAAGCTCTGGATCAAGGAGAGCTGGAGGGTCCGCCCGAACAAC GGCAGCTTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCAA GTGCCACAAGGACGACGAGTTCATCGCCTTCTTCAAGAGGGACACCAACA CCATCGTCATCTTCATCCCAGGCGGGTTGACTCCTCTCCTCCAATCGCTG GATCGCATGCTCAACAAGCAGATGAAGTGGCTGCTGCGGGGCATGTACAC GAAGCACTCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACAC CGCCTGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACC ATCACGCCGGAGATGGTCAAGACTTGTTTCAAGATCTGCGGCCTCTCGCT TGCGCTCGACGGCAGGGAAGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig209:37169..38690-

>mRNA_P-littoralis_Contig209.4.5 ID=mRNA_P-littoralis_Contig209.4.5|Name=mRNA_P-littoralis_Contig209.4.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1068bp|location=Sequence derived from alignment at P-littoralis_Contig209:37169..38690- (Pylaiella littoralis U1_48)
GACGTCGACCAAGCTTTGGCGGACTGCATCAACGACCAGCGCAAGCAGCA
CTGCGGCTGTGGCAACGCAGAGGTCATGAACAAGCTGCTGGAGATGAAGC
CCGACGCCCTAGGCGGGCTACCAGCCAATTCGACGGCGGAAGAGGGGCTG
GCGTACAAGGTCAAGTTCAACTGGTACCAACGTTTTCGCAAGCGGCAGAG
GCTCAGCATCCGCCGACGTACCAGCGTGGGTCAAAAGCTACCGAAGGGAC
ACGAGGGCATGGCGTGGGCGACGCTGATGAAGCTGCGCGAGGCTCTCGTG
TTCGAAGAACTCGGCAACATGGACCAGACGCCAGTCCAGCACGAGATGCC
GGCGGAGACGACGCTGCAGCAGCGCGGTGATAAGGACGCTCGCATTGCCA
CAGGAGGAAAGGAGAAGGAACGCTTCACGCTTTGCCTTGCTGTCACGGCG
GACGGGAAGAAGGTTCCGGTGCGCATCATCTTTAAGGGGACGCCGTTCAT
CCCGACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAATTCCA
TCGCGGCTGAGATCCTTCCCCAAAACCGTCGCAAGTTCGGGCACCCCATG
GGAGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGTGCGACCTGCGGGA
GTGCAAGCTCTGGATCAAGGAGAGCTGGAGGGTCCGCCCGAACAACGGCA
GCTTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCAAGTGC
CACAAGGACGACGAGTTCATCGCCTTCTTCAAGAGGGACACCAACACCAT
CGTCATCTTCATCCCAGGCGGGTTGACTCCTCTCCTCCAATCGCTGGATC
GCATGCTCAACAAGCAGATGAAGTGGCTGCTGCGGGGCATGTACACGAAG
CACTCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACACCGCC
TGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACCATCA
CGCCGGAGATGGTCAAGACTTGTTTCAAGATCTGCGGCCTCTCGCTTGCG
CTCGACGGCAGGGAAGAC
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