mRNA_P-littoralis_Contig207.68.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 316 bits (810), Expect = 6.130e-100 Identity = 152/207 (73.43%), Postives = 170/207 (82.13%), Query Frame = 1
Query: 736 MSSTRGFPGANNDKTIVKFDGFVSEIREGLYKDVEYTLKGADGSDVAEKGPWLIVDGGYHYWRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
+S TRGFPGA NDKTI+KFD F +R G YKDVEYTLKG DG+D+ EKGPWLIVDGGYH W+QLQ PIRAPSN+AE GFKRQ ESVRKD EC FGVVKGRFRI K+ FLYRK+ERIDNI+FTCIILHNMLL++DGIELLE DCDWAGADG+LD ++ PV S + VV DD F+ LRQKLVTNFAYRWG+GTVGWKRS
Sbjct: 249 LSCTRGFPGAQNDKTIIKFDKFAMAVRNGWYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNI--EHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 270 bits (691), Expect = 7.200e-86 Identity = 131/181 (72.38%), Postives = 148/181 (81.77%), Query Frame = 1
Query: 814 REGLYKDVEYTLKGADGSDVAEKGPWLIVDGGYHYWRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
R G YKDV+YTLKG DG+D+ EK PWLIVDGGYH W+QLQ PIRAPS++AE GF RQ ESVRKD EC FGVVKGRFRI K+ FLYRK+ERIDNI+FTCIILHNMLL++DGIELLE DCDWAGADG+LD ++ PV S + VV DD F+ LRQKLVTNFAYRWG+GTVGWKRS
Sbjct: 4 RNGWYKDVKYTLKGEDGADIKEKRPWLIVDGGYHNWKQLQSPIRAPSSKAESGFSRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNI--EHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 182
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JHB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB4_9PHAE) HSP 1 Score: 254 bits (649), Expect = 3.190e-79 Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 1
Query: 736 MSSTRGFPGANNDKTIVKFDGFVSEIREGLYKDVEYTLKGADGSDVAEKGPWLIVDGGYHYWRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDM 1206
+S TRGF GA NDKTIVKFD F +E+R G YKDVEYTLKG DG D+ EKGPWLIVDGGYH W+QLQ PIR PS +AE GFKRQ E VRKD EC FGVVKGRFRI K+ FLYRK+ERIDN +FTC+ILHNMLL++DGIELLE CDWAGADG+LD+D+
Sbjct: 4 LSCTRGFHGAQNDKTIVKFDKFATEVRNGWYKDVEYTLKGEDGGDIKEKGPWLIVDGGYHNWKQLQSPIRVPSTKAESGFKRQLEGVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNTFFTCMILHNMLLAYDGIELLEPYCDWAGADGDLDEDI 160
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.070e-76 Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 1
Query: 736 MSSTRGFPGANNDKTIVKFDGFVSEIREGLYKDVEYTLKGADGSDVAEKGPWLIVDGGYHYWRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDM 1206
+S TRGFPGA NDKTIVKFD F +E+R G YKDVEYTLKG DG D+ EKGPWLIV GGYH W+QLQ PIR PS +AE GFKRQ E VRKD EC FGVVKGRFRI K+ FLYRK+ERIDN +FTC+ILHNMLL++DGIELLE CDWAGADG+LD+D+
Sbjct: 212 LSCTRGFPGAQNDKTIVKFDKFATEVRNGWYKDVEYTLKGEDGGDIKEKGPWLIVGGGYHNWKQLQSPIRVPSTKAESGFKRQLEGVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNTFFTCMILHNMLLAYDGIELLEPYCDWAGADGDLDEDI 368
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 227 bits (579), Expect = 3.310e-68 Identity = 103/166 (62.05%), Postives = 132/166 (79.52%), Query Frame = 3
Query: 246 PTRRHERLAKFRRRFGVPYPFFLDLVEGIKKENWKGVTTDTYQLGGRGTRKCIPVEIKVLAVLRMLGRGNYCDDIADFTGMSESTVQDVFHKFTERFAREYYPIWVRMPDEEELKRVIKDCDEVGMTGAMGSVDVTHVHWASAPHSERPSYTGKEGYPTIAYEYVV 743
P+ R + +FRRRF VPYPFFL LV+ +K NW G TTD ++LGGRGTR+CIPVE KVLAVLR+LGRGNY DD+++ TGM E+TV +FHKFTERFARE++P+WVRMP+E+ELK ++K DEVGM+GAMGS+D TH+ W P+S+R S+ GKEGY T+ + V
Sbjct: 79 PSTREAK--QFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFAREFFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAV 242
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JLC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC3_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.860e-64 Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 1
Query: 919 WRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
W+QLQ PIRAPSN+AE GFKRQ ESVRKD EC FGVVKGRFRI K+ FLYR +ERIDNI+FTCIILHNMLL++DGIELLE DCDWAGADG+LD+D+ H V + + T A VV D FE LRQKLVTNFAYRWG+GTVGWKRS
Sbjct: 8 WKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRTKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDEDIV-HPDVRMSAPTHEDA-VVECDAGFEALRQKLVTNFAYRWGQGTVGWKRS 151
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5J6J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6J6_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.740e-61 Identity = 105/143 (73.43%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 928 LQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
LQ PIRAPSN+AE GFKRQ ESVRKD EC FGVVKGRFRI K+ FLYRK+ERIDNI+FTCIILHNMLL++DGIELLE DCDWAGADG+LD ++ PV S + VV DD F+ LRQKLVTNFAYRWG+GTVGWKRS
Sbjct: 63 LQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNI--EHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 203
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JKX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKX2_9PHAE) HSP 1 Score: 204 bits (519), Expect = 5.450e-60 Identity = 105/145 (72.41%), Postives = 115/145 (79.31%), Query Frame = 1
Query: 922 RQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
R LQ PIRAPSN+AE GFKRQ ESVRKD EC FGV+KGRFRI K+ FLYRKRERIDNI+FTC+ILHNMLL++DGIELLEADCDWA ADG LDD + P +AEVV DDDF LRQKLVTNFAYRW +GTVG KRS
Sbjct: 51 RSLQSPIRAPSNKAEAGFKRQLESVRKDSECCFGVLKGRFRILKMGFLYRKRERIDNIFFTCVILHNMLLAYDGIELLEADCDWARADGNLDDHIV--HPDARRMAITHEAEVVEWDDDFLELRQKLVTNFAYRWAQGTVGRKRS 193
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5K8X0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 6.590e-58 Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 964 EKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
E GFKRQ ESVRKD EC FGVVKGRFRI K+AFLYRKRERIDN++FTC+ILHNMLL++D I+LLEADCDWAGADGELDDD+ + L S +AEVV RD+DFE LRQKLV NF YRW +GTVGWKRS
Sbjct: 2 ETGFKRQLESVRKDAECCFGVVKGRFRILKMAFLYRKRERIDNVFFTCLILHNMLLAYDDIKLLEADCDWAGADGELDDDIVHPEAPRLASQV--EAEVVERDNDFEQLRQKLVANFGYRWEQGTVGWKRS 130
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 204 bits (520), Expect = 4.870e-57 Identity = 105/204 (51.47%), Postives = 141/204 (69.12%), Query Frame = 1
Query: 745 TRGFPGANNDKTIVKFDGFVSEIREGLYKDVEYTLKGADGSDVAEKGPWLIVDGGYHYWRQLQCPIRAPSNRAEKGFKRQHESVRKDVECFFGVVKGRFRINKVAFLYRKRERIDNIWFTCIILHNMLLSFDGIELLEADCDWAGADGELDDDMTSHQPVPLPSNTAPQAEVVLRDDDFENLRQKLVTNFAYRWGEGTVGWKRS 1356
++ FPGA NDKTIV FD +V I+ KDV +TL G DGS+ E+G +LIVDGGYH +CP++ P + E F++Q ESVRKD+ECFFG++KGRFRI K+ LYR ++D I+ TC LHNML S+DG+ LLE DC+WAGADG+LD +T+ + N+ ++ L +DDF++L+ KLVTN A GTVGW+RS
Sbjct: 250 SKAFPGAMNDKTIVMFDEYVRRIKTEC-KDVPFTLLGEDGSEFEERGLYLIVDGGYH-----KCPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNSP---DLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig207.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig207.68.1 >prot_P-littoralis_Contig207.68.1 ID=prot_P-littoralis_Contig207.68.1|Name=mRNA_P-littoralis_Contig207.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=424bp MRAMNRSRNALESWSSDLTTAAVVGPGCWSIRRTSFPTRRHERLAKFRRRback to top mRNA from alignment at P-littoralis_Contig207:404640..408132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig207.68.1 ID=mRNA_P-littoralis_Contig207.68.1|Name=mRNA_P-littoralis_Contig207.68.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3493bp|location=Sequence derived from alignment at P-littoralis_Contig207:404640..408132- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig207:404640..408132- >mRNA_P-littoralis_Contig207.68.1 ID=mRNA_P-littoralis_Contig207.68.1|Name=mRNA_P-littoralis_Contig207.68.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1272bp|location=Sequence derived from alignment at P-littoralis_Contig207:404640..408132- (Pylaiella littoralis U1_48)back to top |