mRNA_P-littoralis_Contig206.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig206.10.1
Unique NamemRNA_P-littoralis_Contig206.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 4.620e-191
Identity = 256/260 (98.46%), Postives = 257/260 (98.85%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDK YAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSE DLLFSKRLESVRKDVECF GILKMRFRILKLAMTYQKQERLDYVFFTCCIL+NMLHTHDGMGGLEED
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 387          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 6.330e-143
Identity = 194/260 (74.62%), Postives = 220/260 (84.62%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLA LTILGRGN F SIY +SWMS  TVQ +FH+FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN  RSYTGKEG PTVGYQVTVNHAGR +AVTEGFT STNDKT +C D  V++IRTD  Y EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE D+LFSKRLESVRKDVECF GILK  FRI K+AM Y +QER+D VFFTCCIL+NMLHT DGM  L E+
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVEN 358          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 3.070e-135
Identity = 197/288 (68.40%), Postives = 220/288 (76.39%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLA LTILGRGN F SIY +SWMS  TVQ +FH+FC HFA EMYDE I LP+EE+G+LD VM QY++LGF GA+GS DVTHI WSRCPYNQ RSYTGKEG PT+ YQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++I TDK Y                             EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECF GILK RFRILKLAM YQ QER+D VFFTC IL+NMLHT DGM  L E+
Sbjct:   86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVEN 373          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 3.040e-124
Identity = 179/260 (68.85%), Postives = 203/260 (78.08%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLA LTILG+GN F SI+ +SWMS  TVQ VFH+FC  FA EMYDEHI LP+EE+G+L  VM QY++LG                 CPYNQ RSYTGK+  PT+ YQVTV+HA R +AVTEGFTGSTNDKTI+C D AVD+IRTDK Y EK F ++ +DGTT TLKGCY + DNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECF GILK RFRILKLAM YQ QER+D VFFTCCIL+NMLHT DGM  L E+
Sbjct:   21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 263          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.540e-120
Identity = 166/218 (76.15%), Postives = 188/218 (86.24%), Query Frame = 1
Query:  127 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            MYDEHI LP+EE+G+LD V+ QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AVTEGFTGSTNDKT +C D AV++IRTDK Y EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECF GILK R RIL LAM +Q QER+D VFFTCCIL+NMLHT DGM  L E+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 218          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 5.940e-118
Identity = 166/260 (63.85%), Postives = 206/260 (79.23%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD +Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+ GILK RFRI KLA+ + KQE +D VFFTCCIL+NMLH+ D  G + E+
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 341          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.040e-116
Identity = 166/260 (63.85%), Postives = 206/260 (79.23%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD +Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+ GILK RFRI KLA+ + KQE +D VFFTCCIL+NMLH+ D  G + E+
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 432          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 3.760e-116
Identity = 170/260 (65.38%), Postives = 201/260 (77.31%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            VLACL IL RGN F  IY++S++S  T    FH+F  +FA EMY EHIFLP+ +  +  +VM QY++LGF GA GSTDVTHI W  CPYNQ RSYTGKEG PTV YQVTV+H  RVLAVT GFTGSTNDK+II  D AV +IR D +Y+EK FTV++ DGT   LKGCYL+VDNGYHKW  LI PSKYP+ + DL FSKRLESVRKDVECF GI+K RFRILKL++ Y KQE +D VFFTCCIL+NMLH++D    +EE+
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEE 416          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 3.230e-97
Identity = 138/189 (73.02%), Postives = 158/189 (83.60%), Query Frame = 1
Query:    1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYP 567
            VLA LTILGRGN F SIY +SWMS  TVQ +FH FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN  RSYTGKEG PT+GYQVTVNHAGR  AVTEGFTGSTNDKTI+C D AV++IRTDK Y EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+   + P
Sbjct:  126 VLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314          
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 1.130e-96
Identity = 145/254 (57.09%), Postives = 177/254 (69.69%), Query Frame = 1
Query:   19 ILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKRLESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHTHDGMGGLEED 780
            +LG+GN F  +  LS MS    Q  FH+FC HFA EM+DEHI+LP+     LD VMG + +LG+ GA GSTDVTHIGW+ CP+  GRS+TGKEG PT+ Y VTV+H GR LAVT GFTG+TNDKTII  D  V++IRT   Y E+ + + K +GT    +GC+LIVDNGYH+W  LI PSKYP    D  FS+ LESVRKDV CF        RILKL M Y K+E +D +FFTCCIL+NMLHT DG+   EE+
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEEN 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig206.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE4.620e-19198.46Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE6.330e-14374.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE3.070e-13568.40DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE3.040e-12468.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI1.540e-12076.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY50_9PHAE5.940e-11863.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.040e-11663.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.760e-11665.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI3.230e-9773.02Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5K796_9PHAE1.130e-9657.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig206contigP-littoralis_Contig206:64273..65253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size780
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.52e-121
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size780
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790003.505416-CDS-P-littoralis_Contig206:64272..645181680790003.505416-CDS-P-littoralis_Contig206:64272..64518Pylaiella littoralis U1_48CDSP-littoralis_Contig206 64273..64518 -
1680790003.5162842-CDS-P-littoralis_Contig206:64719..652531680790003.5162842-CDS-P-littoralis_Contig206:64719..65253Pylaiella littoralis U1_48CDSP-littoralis_Contig206 64720..65253 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig206.10.1prot_P-littoralis_Contig206.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig206 64273..65253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig206.10.1

>prot_P-littoralis_Contig206.10.1 ID=prot_P-littoralis_Contig206.10.1|Name=mRNA_P-littoralis_Contig206.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp
VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFL
PSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEG
KPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKLYAE
KPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSETDLLFSKR
LESVRKDVECFLGILKMRFRILKLAMTYQKQERLDYVFFTCCILYNMLHT
HDGMGGLEED
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mRNA from alignment at P-littoralis_Contig206:64273..65253-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig206.10.1 ID=mRNA_P-littoralis_Contig206.10.1|Name=mRNA_P-littoralis_Contig206.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig206:64273..65253- (Pylaiella littoralis U1_48)
GTGCTGGCGTGTCTGACTATACTGGGCAGGGGGAATGTATTTGGAAGCAT CTACAACCTTTCGTGGATGAGCACCCCGACAGTGCAGAAGGTGTTCCACC AGTTCTGCGAGCACTTCGCAACCGAGATGTACGACGAGCACATCTTCCTT CCCAGCGAGGAGAACGGCGAGCTGGATCGCGTCATGGGACAGTACGAGAA GCTGGGGTTCCCGGGCGCAATGGGTTCAACGGACGTCACCCATATCGGGT GGAGTAGGTGCCCGTACAACCAAGGACGTTCTTACACCGGTAAGGAAGGC AAGCCTACGGTCGGATACCAGGTGACGGTCAACCACGCTGGGCGTGTGCT GGCCGTGACAGAGGGGTTCACTGGGTCCACCAACGACAAGACCATCATCT GCTGTGATGAAGCGGTAGACAGAATTCGGACCGACAAGCTGTACGCCGAA AAACCATTCACAGTCCACAAAAAGGATGGTACCACGGAAACCCTGAAGGG GTGCTACCTCATCGTCGACAATGGTTACCACAAGGTGAAAAAATGTAAAG TACCACACGAAACGTCGGGAGGCTTTTTCACGAGCACGCCTTGTTTGTCG GCCAACCTACACTATCATCCCGGTTGGTCGAGCTCCATGCCGTGGGTTTG ACGTGCGACAATGAACGCGGCATGACACACAGAAGGTCAATATTTTCCCT TCTCTCCTTTGGTTTGTTTCGGTCCTTTCATGCAGTGGCGGATGCTCATT GAACCCTCGAAGTACCCGTTGAGCGAGACTGACTTGCTGTTCTCGAAGAG GCTGGAGAGCGTGCGCAAGGATGTGGAGTGTTTTTTGGGCATCCTGAAGA TGCGCTTCAGAATCCTGAAGCTCGCCATGACCTACCAGAAGCAGGAGCGC CTCGACTACGTCTTCTTCACATGCTGTATCCTGTACAACATGCTCCATAC GCATGACGGCATGGGCGGCCTGGAGGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig206:64273..65253-

>mRNA_P-littoralis_Contig206.10.1 ID=mRNA_P-littoralis_Contig206.10.1|Name=mRNA_P-littoralis_Contig206.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig206:64273..65253- (Pylaiella littoralis U1_48)
GTGCTGGCGTGTCTGACTATACTGGGCAGGGGGAATGTATTTGGAAGCAT
CTACAACCTTTCGTGGATGAGCACCCCGACAGTGCAGAAGGTGTTCCACC
AGTTCTGCGAGCACTTCGCAACCGAGATGTACGACGAGCACATCTTCCTT
CCCAGCGAGGAGAACGGCGAGCTGGATCGCGTCATGGGACAGTACGAGAA
GCTGGGGTTCCCGGGCGCAATGGGTTCAACGGACGTCACCCATATCGGGT
GGAGTAGGTGCCCGTACAACCAAGGACGTTCTTACACCGGTAAGGAAGGC
AAGCCTACGGTCGGATACCAGGTGACGGTCAACCACGCTGGGCGTGTGCT
GGCCGTGACAGAGGGGTTCACTGGGTCCACCAACGACAAGACCATCATCT
GCTGTGATGAAGCGGTAGACAGAATTCGGACCGACAAGCTGTACGCCGAA
AAACCATTCACAGTCCACAAAAAGGATGGTACCACGGAAACCCTGAAGGG
GTGCTACCTCATCGTCGACAATGGTTACCACAAGTGGCGGATGCTCATTG
AACCCTCGAAGTACCCGTTGAGCGAGACTGACTTGCTGTTCTCGAAGAGG
CTGGAGAGCGTGCGCAAGGATGTGGAGTGTTTTTTGGGCATCCTGAAGAT
GCGCTTCAGAATCCTGAAGCTCGCCATGACCTACCAGAAGCAGGAGCGCC
TCGACTACGTCTTCTTCACATGCTGTATCCTGTACAACATGCTCCATACG
CATGACGGCATGGGCGGCCTGGAGGAGGAC
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