mRNA_P-littoralis_Contig205.33.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 2.360e-150 Identity = 241/371 (64.96%), Postives = 279/371 (75.20%), Query Frame = 2
Query: 128 MVPFRTVPALLLLLLSTTTSVCNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEEQDVNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWG-GGDEDGPAVQVATGGKLTGESSAEFISGSETGCATVYYEDGDVC 1237
MVP + A LLL+S SVC G +ETC+DL DAF T QDV VEI P +ITC SFTTMSM++N+LTV++ D SV LNE+RFEVT+GAKL ++P SF GTE QDVNGGAVYVGEGS+ARFY T +VGVRSVPE+GSDFASY+L GGCVYVDGYFRV+G A+FV CE GGGESSPGPGGVMYVG TGSVLFAGEV+M +VSI DDEGNNGGGIYN GKVNIKGNA F++LRAEAGGAIFN GAEFRFK GATA F +C + D I GAV+N GYFK SGPA + +P + +GS+GY RLSE SVF G G D P + V GG+LTG F + ++TGC TVYYE+GDVC
Sbjct: 1 MVPLSKISAAALLLVSG--SVCQGQ---LETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTP----DGQSGSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQDVNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGSDYPEPIMFVMEGGRLTGVGKVTFDNAADTGCGTVYYEEGDVC 362
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 438 bits (1127), Expect = 8.230e-144 Identity = 241/372 (64.78%), Postives = 276/372 (74.19%), Query Frame = 2
Query: 137 FRTVPALLLLLLSTTTSVCNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEEQDVNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCV----YVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWGGGDE-DGPAVQVATGGKLTGESSAEFISGSETGCATVYYEDGDVC 1237
F + A LLL+S SVC G VETC+DL DAF T QDV VEI P +ITC +FTTMSM++N+LTV ++ D SV LNE+RFEVT+GAKLF+HP SF T+ QDVNGGAVYVGEGSTARFY T +VGVRSVPE+GSDFASYEL GGCV YVDGYFRV+G A+FV CE GGGESSPGPGGVMYVG TGSVLFAGEV+M +VSI DDEGNNGGGIYN GKVNIKGNA F++LRAEAGGAIFN GAEFRFK GATA F +C + D GAV+N GYFK SGPA + +P + +GS+GY RLSE SVF G G E P + V GG+LTG F + +ETGC TVYYE+GDVC
Sbjct: 234 FGKISAAALLLVSG--SVCRGQ---VETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTAT----DGQSGSVGLNEVRFEVTDGAKLFWHPGASFTETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGYEYPEPIILVREGGRLTGVGKVTFDNAAETGCGTVYYEEGDVC 596
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 303 bits (775), Expect = 2.070e-93 Identity = 162/333 (48.65%), Postives = 222/333 (66.67%), Query Frame = 2
Query: 191 CNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEEQD--VNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWGGGDEDGPAVQVATGGKLTGESSAEFI 1183
C+GL +ETC+DL AF+ T+ +DV VE+ P+++I C +FT M+M SN+LTV SSE + D S +L +R +VTNGAKLF+ +V F G EE D V+GGAVYVGEGST RF + + +D+ + + ++ SDF+S+ SGGCV+ GYFRVDG+ATF C++ G GES PGPGG +YVG TGSVLF G V++++ ITDD G +GGGIYN GKVNIKG++ F+D+ A +G AI+N +GA F F+SGA A F + D A++N G+FKFSGPAL +++ P +SE+S FW + G A+ V G T S F+
Sbjct: 99 CHGL---IETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENI-DNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDESPGDALSVNDGADFTLPDSVTFV 427
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 289 bits (740), Expect = 2.710e-89 Identity = 163/334 (48.80%), Postives = 216/334 (64.67%), Query Frame = 2
Query: 188 VCNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEEQD--VNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWGGGDEDGPAVQVATGGKLTGESSAEFI 1183
V +GL +ETCEDLQ AF+ T+ QDV EI P+ +I C +FT M+M SNTLT+ SSE L D S +L +R VTNGA+L + V+F+G EE + V+GGAV+VGEGST F + E ED+ + + ++ SDFAS+ SGGCV+ G F VDG+ATF RC++ G GES PGPGG +YVG TGSV F V++SE ITDD G GGGIYN G+V I G++ F+D+ A +G AI+N +GAEF F + A+A F + D + + NLGYF+FSGPAL + +D+P T LSENS FW +E G A+ V T +S F+
Sbjct: 17 VAHGL---IETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENL-DNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEFGEALSVDEAADFTIPASVVFV 346
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 268 bits (684), Expect = 5.790e-81 Identity = 153/336 (45.54%), Postives = 212/336 (63.10%), Query Frame = 2
Query: 188 VCNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEE--QDVNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWGGGDED--GPAVQVATGGKLTGESSAEFI 1183
V GL +ETCEDLQ AF+ T+ QDV EI + +I C FT M+M SNTLT+ S+E+L S +L +R EVTNGAKL + SV F+G EE +VNGG V+VGEGST RF + + DV + + + SD A + GGCV+ G+FRVDG+ATF C + G GES PG GG ++V TGSVLF V++S+ IT+D G +GGGI+N GKVNIKG++ F++L A +G AIFN + A F F++GA+A F + D A+ NLG+FKFSGP L +++++P +S +S FW ++D G A+ VA +++ S F+
Sbjct: 17 VARGL---IETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDL-SITSGSTSLINVRLEVTNGAKLVWETSVFFLGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFV 348
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 264 bits (675), Expect = 5.050e-80 Identity = 151/333 (45.35%), Postives = 201/333 (60.36%), Query Frame = 2
Query: 191 CNGLTKVVETCEDLQDAFDSTKQQDVEVEIDPYSEITCSSFTTMSMNSNTLTVISSEELCDACRASVNLNEIRFEVTNGAKLFFHPSVSFVGTEEQD--VNGGAVYVGEGSTARFYTNFETEDVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIGSTGYMRLSENSVFWGGGDEDGPAVQVATGGKLTGESSAEFI 1183
C+GL +ETC+DL AF+ T+ +DV VE+ P+++I C +FT M+M SNTLT LF+ +V F G EE + V+GGAVYVGEGST RF + + DV + + ++ SDFAS+ SGGCV+ GYFRVDG+ATF C++ G GES PGPGG +YVG TGSVLF V+++E SITDD G GGGIYN GKVNIKG++ F+++ A AG AI+N +GA F F++GA A F + D A+ NLG+FKFSGPA +++ P LSE+S FW + G A+ V G T S F+
Sbjct: 18 CHGL---IETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLT-----------------------------LFWETNVIFEGDEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDESPGDALTVNEGADFTLPDSVTFV 318
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI) HSP 1 Score: 176 bits (446), Expect = 3.080e-48 Identity = 88/170 (51.76%), Postives = 120/170 (70.59%), Query Frame = 2
Query: 551 DVGVRSVPEDGSDFASYELSGGCVYVDGYFRVDGDATFVRCEVGGGGESSPGPGGVMYVGGTGSVLFAGEVSMSEVSITDDEGNNGGGIYNKGKVNIKGNAEFKDLRAEAGGAIFNAKGAEFRFKSGATAIFNECFAHDEIAGAVYNLGYFKFSGPALALNSDSPAYYIG 1060
DVG+ + ++ SD+ASY+ SGGCV G F V+GDATF CE G GES+PGPGG ++V TGSV F+ V++ E SITDD G GGGIYN G+VN+ G + F+D+ A +G A++N +GA+ RF +GATA F + D + A+Y LGYF+FSGPAL + +D+PA + G
Sbjct: 3 DVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTPARHRG 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.33.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig205.33.2 >prot_P-littoralis_Contig205.33.2 ID=prot_P-littoralis_Contig205.33.2|Name=mRNA_P-littoralis_Contig205.33.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp MVPFRTVPALLLLLLSTTTSVCNGLTKVVETCEDLQDAFDSTKQQDVEVEback to top mRNA from alignment at P-littoralis_Contig205:226021..233364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig205.33.2 ID=mRNA_P-littoralis_Contig205.33.2|Name=mRNA_P-littoralis_Contig205.33.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7344bp|location=Sequence derived from alignment at P-littoralis_Contig205:226021..233364+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig205:226021..233364+ >mRNA_P-littoralis_Contig205.33.2 ID=mRNA_P-littoralis_Contig205.33.2|Name=mRNA_P-littoralis_Contig205.33.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1116bp|location=Sequence derived from alignment at P-littoralis_Contig205:226021..233364+ (Pylaiella littoralis U1_48)back to top |