mRNA_P-littoralis_Contig205.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: D7G2Z1_ECTSI (Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 pdb|2ADO|B Chain B, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z1_ECTSI) HSP 1 Score: 430 bits (1105), Expect = 4.360e-121 Identity = 702/1835 (38.26%), Postives = 812/1835 (44.25%), Query Frame = 1
Query: 115 MTQHMGMMMDFSDEEEKGEESIPVVGHLQLLPPHDSTVGWLFKEFTDGETTVGRTDDQDLTISNPSVSGSHAVIDVVELPGSGGKRLYLKDLRSTNGTYVIDATTGDKTRLAPKKATLLPEEGCRVQLGGVVCKVSMGPAPDPAADXXXXXXXXXXXAGVYDNDTQLPGAMDGLDDDXTEGGKEGQAXXXXXXXXXXXDDKKDNTEPLAFTGEGEEGKASEGVGGKLEGGGEASEAEANKLEARHDGVPKAHRGAAGRNDGEREDLGVEETKGGEGADARRGTSDESPSPSRIRFEGVESMSEGDSNGXXXXXXXKDNGPGANEPPTQGMVLELLDDSSSDNGKHKEGQNITARKRNSGDAGSSPGMALELDDSSSDKGQEGNSAAAATAELNDSAGGGAPATPSAALTTITADVSVATSANPDPNRGRIALANSAEDTADEGETADLFQQIDEESDGNRSKSNISASTAGNDHDQDQDSGDXXXXXXXXXXXXXXNDGGAAGARVGAGT----------------LTAAAVRSPERSATASLNATPMTPSTVPDVNNEQVMSPGYTSDVSTQRQESPRIASQVREGAGQERAAVATGAAGSAESCNTGSQQSGERLSLGGAVTEGEERKEGVLAAKAGVKGGSDSDEGSDSSGALIPAQNLEGFEDYLLDA-ASEPATXXXXXPAPVDAGAAGVGAREDAIADENDSGSETDATEVDTDEGPPDGQEATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGNRQTPASA-DDVNAGGGSGADGMDGVGVNRAQPSNSEETRSPGGSLLRRISTEDAMMAIAREHARNEAAEITRAGAGSMDFGPGEDRXXXXXXXXXXXXXXXVQQEDTEVDNYGGEAETQAVPMQXXXXXXXXXXXXEKAADG--TQILEEDLTPPEPDG----DTTLIAIGVTAEERASAAATEGGKGKENAS-------------------------------------------------------------------RDAREVVAGEGASTAEEXXXXVQGXXXXXXXXXXXXXXXXXXXAPRTS---------------GRRRTPTPKAASNESSIRSTATSDAQVTKVNELPYRTEVPSAGKRS-TRRSATPASGQEETPSLPAAAALATGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEPQGEAVPEVAAPRRTGRGRAXXXXXXXXXXPTEPAADKPKGGTKVRGRKKAGEDSEEEAGADAXXXXXXXXXXDTQGRRTKVGGTTQPKSK------AGTVRPPKGTGKGVSRKR--------------------------------------------------------KAEEAGVLYSSSSQGGETHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXDTATRKGDKPTAAPTAAVESTPSKRGRGRSSAATAVEDEKSAPRGTPARGGGRGDDARSSPPPMSVAAAGRSASVGG-------ADSESPSEVKVCFTGVKPTVKERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRGVPNPQSLLVISHPDALKAAGAKGVKSRATAAAGRNGKAFLPEMLFLCILRQKISWPVDLAIGGXXXXXXXXXXXEKGGRGSTERKKPVKRRRV 5091
MTQHMGMM DFSDEEE E+S PVVG+LQ+LPP+ + KE DGETTVGR +DQD+T+++PSVSG+HAVI+V+E+PG GGKRL +KDLRSTNGTY+ID TGDK RLAPKKAT+LPEEGCR+Q GG CKV+MGP P+P A GVYDNDTQ+ G +D +D+ EG A KK +TEPL G EEGK SEAEA A D + RGA G D R+D GVEETKG EG + G XXXXXXX D+S +G+EG +A AA XXXXXXXXXXXXXX D A GA A T L AAA RSP SATA L+ TPMTPST+PD+ V SPG SDVSTQRQESPR + GE DS G A +L+GFED LLDA A+EPA X ETDATEVDTDEGP + +G AS+ D N GG ++ + G P E+ RSPGGSLLRR+STED+MMAIAREHAR+EA RA A +++ XXXXXXXXXXXXXXX +TEVDN GEA TQA+P+Q XXXXXXXXX T+++EE +PP+ D DT+ ++ + GG E A+ R+ VVA E XXXX XXXXXXXXXXXXXXXXXXX RRR +A ++S++ + S ++ K + T + G+R+ TRR+A AS E+ P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +GE + P RGR PAA GG + + A G+RT+ G +S+ T + +GT +G S+ R KAEEAGV S + G + D XXXXXXXXXXXXXXXXXXXXXXX D+ P A TPSK DS+S +VKVCFTGVKPT KER C+KKLG+SEV+SV+EATHLVAGGSGV LKRTPKLLAGL RCRFVVDVEWLYQS+K+GKLLDGVE+VLCD EAEKKWGFNMRVSLGRR EAGLL GLSV+VDP VAGVKGMGCPP EMEMVVISA GQWL Q+PKRG P P+SLLVISHPDALKAAGAKG KSRA AAAGRNGKA+LPEM FLCILRQK+SWP DL GG G KKP KRRRV
Sbjct: 1 MTQHMGMM-DFSDEEEMDEDSSPVVGYLQVLPPNAR----MLKEIKDGETTVGRNEDQDITVADPSVSGAHAVIEVLEVPGGGGKRLTVKDLRSTNGTYIIDTETGDKKRLAPKKATMLPEEGCRIQFGGAACKVAMGPLPEPGA------LSEEEKDGVYDNDTQIAGVIDLGNDEEAEGKAAAGAGAREDAAAGG---KKSDTEPLP--GAEEEGK---------------SEAEAGTPLAGTD-ASEPGRGAGG--DRSRQDQGVEETKG-EGCGSDGGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXDNSEGGEGEEGANAEAAGNNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDADGAMAKAVTDAGGXXXXXXXXXXAGLPAAAPRSPGPSATAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPF-----------------------------RGGEEXXXXXXXXXXXXXXXXXX---------------XDSPGG---AHDLDGFEDDLLDAGAAEPAETGGDXXXXXXXXXXXXXXXXXXXXXXX---XETDATEVDTDEGPLAAGQTENVPDPPAVEENAPAAGGTGSSSSVGAPPEPAEGTTVSSGRASPGASSGSDANVGGVDASE-EERQGRPGQHPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEA----RAAAMNLES------XXXXXXXXXXXXXXXXXXGETEVDNGTGEAATQAIPVQLEEXXXXXXXXXXXXXXXXXTEVVEEGDSPPQQDDFFTPDTSALSPSKAQADGNKPRGARGGAAGEGAAAVEVALPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRENVVAEEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRK---QALKDDSTLDAPEGSTSKGLK-EQAANNTTPRAVGRRAGTRRAAASASHPEDLPG---------------------------------------------------EEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPLSGTEETARGRGKGETAASTSIPPAAKRGRRSSRAAPA------PAASASLGGDEXXXXXXXXXPASAVAA----------------GKRTRGWGRAAKESEPSEEDTTATPKATRGTARGASQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEEAGVPSSPQADGTDEDD-VAXXXXXXXXXXXXXXXXXXXXXXXGTDSE----------PAAVAPVTPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSQSSGDVKVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVALKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLAGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGTKSRAAAAAGRNGKAYLPEMFFLCILRQKMSWPADLVAGGG------------GAEAGPASKKPAKRRRV 1629
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A6H5LJ12_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ12_9PHAE) HSP 1 Score: 421 bits (1081), Expect = 3.920e-118 Identity = 665/1696 (39.21%), Postives = 761/1696 (44.87%), Query Frame = 1
Query: 385 DLRSTNGTYVIDATTGDKTRLAPKKATLLPEEGCRVQLGGVVCKVSMGPAPDPAADXXXXXXXXXXXAGVYDNDTQLPGAMDGLDDDXTEGGKEGQAXXXXXXXXXXXDDKKDNTEPLAFTGEGEEGKASEGVGGKLEGGGEASEAEANKLEARHDGVPKAHRGAA--GRNDG---EREDLGVEETKGGEGADARRGTSDESPSPSRIRFEGVESMSEGDSNGXXXXXXXKDNGPGANEPPTQGMVLELLDDSSSDNGKHKEGQNITARKRNSGDAGSSPGMALELDDSSSDKGQEGNSAAAATAELNDSAGGGAPATPSAALTTITADVSVATSANPDPNRGRIAL---------ANSAEDTADEGETADLFQQIDEESDGN-RSKSNISASTAGNDHDQDQDSGDXXXXXXXXXXXXXXN-DGGAAGARVGAG------------TLTAAAVRSPERSATASLNATPMTPSTVPDVNNEQVMSPGYTSDVSTQRQESPRI---ASQVREGAGQERAAVATGAAGSAESCNTGSQQSGERLSLGGAVTEGEERKEGVLAAKAGVKGGSDSDEGSDSSGALIPAQN-LEGFEDYLLDA-ASEPATXXXXXPAPVDAGAAGVGAREDAIADENDSGSETDATEVDTDEGPPDGQEATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGNRQTPASA-DDVNAGGGSGADGMDGVGVNRAQPSNSEETRSPGGSLLRRISTEDAMMAIAREHARNEAAEITRAGAGSMDFGPGEDRXXXXXXXXXXXXXXXVQQEDTEVDNYGGEAETQAVPMQXXXXXXXXXXXXEKAADGTQILEEDLTPPEPDG----DTTLIAIGVTA----EERASAAATE-------------GGKGKENASRDAREVVAGEGA------------------STAEEXXXXVQGXXXXXXXXXXXXXXXXXXXAP---------------------------------------RTSGRRRTPTPKAASNESSIRSTATSDAQVTKVNELPYRTEVPSAGKRSTRRSATPASGQEETPS-----LPAAAALATGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEPQGEAVPEVAAPRRT-GRGRAXXXXXXXXXXP---------TEPAADKPKGGTKVRGRKKAGEDSEEEAGADAXXXXXXXXXXDTQGRRTKVGGTTQPKSKAGTVRPPKGTGKGVSRKRKAEEAGVLYSSSSQGGETHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXDTATRKGDKPTAAPTAAVESTPSKRGRGRSSAATAVEDEKSAPRGTPARGGGRGDDARSSPPPMSVAAAGRSASVGGADSESPSEVKVCFTGVKPTVKERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRGVPNPQSLLVISHPDALKAAGAKGVKSRATAAAGRNGKAFLPEMLFLCILRQKISWPVDLAIGGXXXXXXXXXXXEKGGRGSTERKKPVKRRRV 5091
DLRS NGTY+ID TGDKTRLAPKKAT+LPEEGCR+ GG CKV+MGP P+P A GVYDNDTQ+PG +D DD+ EG E A D KK +TEPL S AE G+P A A+ GR G R+D GVEETKG EG + G SPS R+RFE + G D E PTQ M LELLDDS ++ G A D PA P A + + A++A P G A A++ DTADEG+ A LF++ DEE DGN ++++ +A+ AG +++SGDXXXXXXXXXXXX + DG A A AG L AAA RSP SATA L+ TPMTPST+PD+ V SPG SDVSTQRQESPR + GS+ SGAL+PA++ L+GFED LLDA A+EPA X TDATEVDTDEGP +G AS+ D NAGG + G + G QP E+ RSPGGSLLRR+STED+MMAIAREHAR+EA A A + + XXXXXXXXXXXXXXX XXXXXXXXXXXX A DGT+++EE +PP+ D DT+ ++ E R A E G GK+ A G+ A S EE G XXXXXXXX RTSGRR+ ++ ++ ST+ + N P G+ TRR+A AS E P P A A GR XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX D EPQ E V A +R GRGRA XXXXXX T + +G DA Q R+ K GG + A RKRKAEEAGV S + G + D XXXXXXXXXXXXXXXXXXXXXXXXXXX V DSES +VKVCFTGVKPT KER C+KKLG+SEV+SV+EATHLVAGGSGV LKRTPKLLAGL RCRFVVDVEWLYQS+K+GKLLDGVE+VLCD EAEKKWGFNMRVSLGRR EAGLL+GLSV+VDP VAGVKGMGCPP EMEMVVISA GQWL Q+PKRG P P+SLLVISHPDALKAAGAKG KSRA AAAGRNGKA+LPEMLFLCILRQK+SWP DL GG G KKP KRRRV
Sbjct: 2 DLRSPNGTYIIDTETGDKTRLAPKKATMLPEEGCRIHFGGAACKVAMGPLPEPGA------LAEEEKDGVYDNDTQIPGVIDLGDDEEEEGKAEAGAGAEEDAAA---DGKKSDTEPL-------------------------SGAEXXXXXXXEAGIPLAGTDASEPGRGAGVDRSRQDQGVEETKG-EGCASDGGAKPRSPS--RVRFEEAPANLSGGGGAVSGGTGDDDA-----EQPTQAMALELLDDSGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAEEAG----NSQDDGDAAVPADPRGAT-----EETAASAAPPGDGGGADAEVVPTDPPAHADTDGDTADEGDAALLFEKSDEEGDGNVKARAAGAAAAAG--PAGEENSGDXXXXXXXXXXXXDDDADGAMAKAVTDAGGGGSDXXXXXXACLPAAAPRSPGPSATAGLSGTPMTPSTLPDITGRSVTSPGNVSDVSTQRQESPRAPLRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEVSGALLPAEDDLDGFEDDLLDAGAAEPAETGGDXXXXXXXXXXXXXXXXXXXXXXX--XXXTDATEVDTDEGPLAAGRTENVPDPPAVEENASAGGGTRSSSAMGAPPEPAEGTTVSSGGASPGASSGSDANAGGVDASKG-ERQGRRGQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEAL----AAAMNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XAGDGTEVVEEGDSPPQQDEFLTPDTSALSPSKAQADGNEPRGKALPEEEEEEVGVEPPIEAGDAGKKVVEDPAGGEEEGDQAGSDXXXXXXXXXXXXXXXSKEEERSLEKMGAEEEGEGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTSGRRKRTLKDVSTVDAPEGSTSKGLKEQATNNTTPRAV----GGRAGTRRAAASASHPEVLPEGEQEPAPPAPAGRRGRGGKKSPGGVASEPXXXXXXXXXXXXXXXXXXXXXXXXEEAEEVSLSETEGTARGDGKGGTAASAPAXXXXXXXXXXXXXXXXXSTSLGDDKG---------------DDAEPQEEPASAVTAGKRARGRGRAAKESXXXXXXXXXXXXXXXXTARGCSQARGKXXXXXXXXXXXXXXXXXAEDAELSAEESDGAWAQSRQGKAGGKXXNSTGA--------------RKRKAEEAGVPSSPQADGTD-EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---DSESSCDVKVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLSGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGAKSRAAAAAGRNGKAYLPEMLFLCILRQKMSWPADLVAGGG------------GAEAGPASKKPAKRRRV 1587
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A835YMU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU5_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.930e-34 Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 4354 VKVCFTGVKPTVKERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTE-----AGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRGVPNPQSLLVISHPDALKAAGAKGVKSRATAAAGRNGKAFLPEMLFLCILRQKISWPVDLAI 4995
V VCFTG+ P E KK G++ VDSV EATHL+A VPLKRT KLLAGL C VV EWL S K + + D +AE+KW FN+ +L R G+L+G V+ PA+ G G+ CPP+ E++ +V SA +W + +G + +L+V++HPD A K+R A AGR GKA+LPE+L L Q+ +W DL +
Sbjct: 1535 VAVCFTGIVPGAAELAAAKKAGVAIVDSVTEATHLIAS---VPLKRTAKLLAGLCACAHVVTPEWLLASGKRKAPAPEAAYTVKDADAEEKWKFNLAEALARAATLRAAGGGVLSGYRVHALPAMLGRSGLRCPPAAELKQIVESAGAEWAPSLRGKG-GDADTLIVLAHPDVCTTA-----KARKEAGAGRGGKAYLPELLTRACLLQECAWWPDLEV 1744
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A7S2LQ78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LQ78_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.060e-15 Identity = 69/218 (31.65%), Postives = 113/218 (51.83%), Query Frame = 1
Query: 4360 VCFTGVKPTVKERLCIKKLG---ISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLC-DGEAEKKWGFNMRVSLGRRTEA----GLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRGVPNPQSLLVISHPDALKAAGAKGVKSRATAAAGRNGKAFLPEMLFLCILRQK-ISWPVD 4986
V FTGV+ + K + ++ +G I +D ATH++AG + L+RTPKL+ L ++ + WL +S K G++L +++L D AEKK+ F+M+ ++ +EA G+ + VY VAG K P E+E++V SA G +LK +PK V L++ S P A A+ + G LF C++ Q+ +++PVD
Sbjct: 341 VLFTGVEVSDKHKKMVRSIGASLIESIDDAASATHVIAGDTKNSLRRTPKLMVALCVTPNILHLNWLNESFKAGEVLKCNKYLLLKDKAAEKKYNFSMKTTIKNGSEAREKGGIFADMYVYFCKGVAGNKA---PSIKELEIMVSSAGGTFLKVLPKNNVDTKMILIITSDP----ATEAQKREKLVMKIIEGGGHLVSTAWLFQCMIAQEFMAFPVD 551
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A8J2SLB4_9STRA (RING-type E3 ubiquitin transferase BRCA1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLB4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 7.430e-13 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 4348 SEVKVCFTGVKPTVKERLCIKKLGISEVDSVME---ATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGR-RTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRG 4812
S +KV FT V T KER + G +V + E ATHLV VPLKRTPK LA ++ VV ++WL QS + + +D ++V D +AE+ W F++ +L R R L G ++ +D G P E++ + A QWL K G
Sbjct: 462 SNIKVLFTAVDVTDKERAMLSAFGGVQVKAPREWRDATHLVCP---VPLKRTPKFLAAVSVVEHVVTLDWLRQSEQMARAVDAADYVPRDKKAERNWRFDLEETLARTRNGEKCLAGYALLLDHRARRDPKAGLPTDDELKAIAECAGAQWLLNPTKAG 617
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: UPI0006C9E032 (PAX-interacting protein 1-like isoform X1 n=3 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9E032) HSP 1 Score: 66.6 bits (161), Expect = 5.340e-7 Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 1
Query: 4348 SEVKVCFTGVKPTVKERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLK 4794
++ K+ F+G+ P K I++LG + S ++THLV + RT KLL L+RC+++V + WL SS + LD ++ L + E EK + N++ +L +L YV P V P + M ++ SA G + K
Sbjct: 1424 NQPKILFSGINPK-KHAKRIRELGGTLAASWKDSTHLVMNCA----LRTVKLLCCLSRCKYIVSINWLLDSSTQNTFLDESQYALDNPEFEKTFNCNIQKALASPNRGSILKDKIFYVTPGVV-------PAPSVMAEIIESAGGTFEK 1560
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: UPI0009E55510 (uncharacterized protein LOC110032247 isoform X1 n=3 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E55510) HSP 1 Score: 65.9 bits (159), Expect = 8.270e-7 Identity = 57/169 (33.73%), Postives = 81/169 (47.93%), Query Frame = 1
Query: 4360 VCFTGV--KPTVKER-LCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEM-EMVVISARGQWLKQIPKRGVPN---PQSLLVIS 4845
VCF+ K +K++ +K+LGI EV S +EATH VA RT +L + + VV WL + +D ++L D EK+ GF+M VSL R E LL G VYV P+ E+ +V A GQ LK+I + P +LL++S
Sbjct: 892 VCFSNHLNKDVIKQQEKILKRLGIQEVSSSLEATHFVADR----FVRTRNMLEAMAMGKPVVTPMWLESCGQASSSIDEKNYILRDSRKEKEIGFSMPVSLARACELPLLQGKRVYVT--------RNARPNQELISSLVKVAGGQALKRIELSITEDDKLPDNLLILS 1048
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A8D7ZUY6_CULPI (Mediator of DNA damage checkpoint protein 1 n=9 Tax=Culex pipiens complex TaxID=518105 RepID=A0A8D7ZUY6_CULPI) HSP 1 Score: 63.9 bits (154), Expect = 3.330e-6 Identity = 54/198 (27.27%), Postives = 100/198 (50.51%), Query Frame = 1
Query: 4261 DDARSSPPPMSVAAAGRSASVGGADSESPSEVKVCFTGVKPTVKERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISARGQWLKQIPKRGVPNPQSLLVISHPD 4854
DD S+ + + S+S G S ++ ++ FT + P +R+ I + G + VD A+ LV+ + RT K L + R +V +L + + +L+D +F+L DGE E+++ F+++ SL +EA + S++V P+ PP E+++++ SA G+ +K P + + L V+SH D
Sbjct: 1034 DDGESASEANTSTGSTESSSSGTRKSSRVAKPRLMFTKMSPEPYKRM-ITRAGGTIVDLPELASILVSDR----VYRTYKFLCAMARGIPIVGQPYLEEVQRRRELVDPWDFILADGEMERRFKFSLKKSLQLASEAKIFQDYSMFVTPSTK-------PPPDELQLIMASAGGRVIK-FPGQQPKHADKLFVVSHVD 1218
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A2P5C877_PARAD (BRCT domain containing protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5C877_PARAD) HSP 1 Score: 60.8 bits (146), Expect = 2.650e-5 Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 1
Query: 4411 KLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEMEMVVISA-RGQWLKQ---IPKRGVPNPQSLLVIS 4845
+LGIS M+ATH +A RT +L + + VV WL + +D ++L D + EKK+GFNM VSL R ++ LL G V++ P + P EM ++ A GQ +++ +G P+ LL+IS
Sbjct: 749 RLGISIASCSMDATHFIAD----EFARTRNMLEAIALGKPVVTHLWLESCGQASCFIDERNYILRDAKKEKKFGFNMPVSLARASQHPLLKGYKVFITPNIK--------PDKEMITNLVKAVHGQPVEENQISALKGQDFPEYLLIIS 885
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Match: A0A1J0CN46_DENOF (PAX-interacting protein 1 n=1 Tax=Dendrobium officinale TaxID=142615 RepID=A0A1J0CN46_DENOF) HSP 1 Score: 59.3 bits (142), Expect = 4.610e-5 Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 1
Query: 4357 KVCFTG--VKPTVK-ERLCIKKLGISEVDSVMEATHLVAGGSGVPLKRTPKLLAGLNRCRFVVDVEWLYQSSKEGKLLDGVEFVLCDGEAEKKWGFNMRVSLGRRTEAGLLTGLSVYVDPAVAGVKGMGCPPSTEM-EMVVISARGQWLKQI 4800
+VCF+ K + ++ +K+LGI +V S +EATH VA RT +L + + VV WL + +D ++L D EK+ GF+M VSL R + LL G V++ P+ E+ +V A GQ LK+I
Sbjct: 220 QVCFSNHLSKDVINHQKKILKRLGIQDVSSSIEATHFVAD----KFVRTRNMLEAMAMGKPVVTPMWLESCGQVSSFIDEKNYILRDARKEKEIGFSMPVSLARACQHPLLQGKRVFIT--------RNARPNQELISSLVKVAGGQPLKRI 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig205.23.1 >prot_P-littoralis_Contig205.23.1 ID=prot_P-littoralis_Contig205.23.1|Name=mRNA_P-littoralis_Contig205.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1660bp MTQHMGMMMDFSDEEEKGEESIPVVGHLQLLPPHDSTVGWLFKEFTDGETback to top mRNA from alignment at P-littoralis_Contig205:149905..160230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig205.23.1 ID=mRNA_P-littoralis_Contig205.23.1|Name=mRNA_P-littoralis_Contig205.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10326bp|location=Sequence derived from alignment at P-littoralis_Contig205:149905..160230- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig205:149905..160230- >mRNA_P-littoralis_Contig205.23.1 ID=mRNA_P-littoralis_Contig205.23.1|Name=mRNA_P-littoralis_Contig205.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4980bp|location=Sequence derived from alignment at P-littoralis_Contig205:149905..160230- (Pylaiella littoralis U1_48)back to top |