mRNA_P-littoralis_Contig205.18.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE) HSP 1 Score: 433 bits (1114), Expect = 4.790e-146 Identity = 232/400 (58.00%), Postives = 280/400 (70.00%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
LQ+RM VDF+LVDEFSM QD+LGL+SAR KQAV GR D D DV GLSIILVGD QLPPVGA+ +WK PS+ LS+Q + WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW L++ + A VG ER++F +A +IFPTN AD+ L S GTP +A HT+H Y AV+++ FRGLQ H+FLA+GA VFV++ VW SAGLANG VGE+VHMQWAE PP EVVWV +ENYRGP +W GE++ T++ PIAP++ +D++PP R ARC R + PL LAFGI I KS G+ LLRC L++G E+SDG FTAF RCRTLEN+LLEPF LERFLKIG+S SFQ RL AI
Sbjct: 32 LQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 420
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 7.320e-144 Identity = 236/400 (59.00%), Postives = 282/400 (70.50%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
LQ+RM VDF+LVDEFSM QDMLGL+SAR KQAV GR D D DV GLSIILVGD QLPPVGA +WK PS+ LS+Q + WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW L++ + A VG ER++F +A +IFPTN AD+ L S GTP +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+NVW SAGLANG VGE+VHMQWAE PP EVVWV +ENYRGP +W GE++ T++ PIAP++ +D++PP R ARC R + PL LAFGI I KSQG+ LLRC+L++G E+SDG FTAF RCRTLEN+LLEPF LERFLKIG+S SFQ RL AI
Sbjct: 436 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 824
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 377 bits (967), Expect = 7.130e-115 Identity = 209/404 (51.73%), Postives = 259/404 (64.11%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRG------P*E--WGGGEVEQTDVIPIAPIEAVDEEPPAR------------RARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEP-FRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
LQQ++ GVDFVLVDEFSM QDMLG++S R KQAV GR D H + GL II+VGD QL V MW P S+ LS Q ++ WL MN AV+LTQVMRQ G QAAFR+TLLRIA+G T DW L+ +T V ER+SF NA +IFPTN AD+ W T P DA+H++H Y + +D FRGL+ LFLAVGA VF+N+NVWTS GLANG GE+VHMQWA + PP+ EVVWV +ENYRG P E WGG V+ +V+PI+PI+A D+ PPA + RC RT+ PL LAFGI I KSQG+ LLRC+L++G +EKSDG FTA RCR L+N+LL+P F LER +IG S +F + R+R +
Sbjct: 1246 LQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADD-WNWRRLQALGT---PIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARLDALHRVREL 1645
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.160e-94 Identity = 166/266 (62.41%), Postives = 194/266 (72.93%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP 795
LQ+RM VDF+LVDEFSM QDMLGL+SAR KQAV GR D D DV GLSIILVGD QLPPVGA +WK PS+ LS+Q + WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW L++ + A VG ER++F +A +IFPTN AD+ L S GTP +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+NVW SAGLANG VGE+VHMQWAE PP EVVWV +ENYRGP
Sbjct: 1177 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGP 1437
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE) HSP 1 Score: 277 bits (709), Expect = 9.410e-86 Identity = 148/275 (53.82%), Postives = 185/275 (67.27%), Query Frame = 1
Query: 376 RTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
+T DDW L++ + A VG ER++F +A +IFPTN AD+ L S GTP +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+N W SAGLANG VGE+VHMQWAE PP EVVWV +ENYRGP +W GE++ T++ PIAP++ +D++PP R ARC R + PL LAFGI I KSQG+ LLRC+L++G E+SDG FTAF RCRTLEN+LLEPF LERFLKIG+S SFQ RL AI
Sbjct: 2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 265
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.200e-61 Identity = 105/165 (63.64%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADE 495
LQ+RM VDF+LVDEFSM QDMLGL+SAR KQAV GR D D DV GLSIILVGD LPPVGA +WK PS+ LS+Q + WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW L++ + A VG ER++F +A +IFPTN AD+
Sbjct: 56 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADD 220
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE) HSP 1 Score: 191 bits (486), Expect = 3.750e-51 Identity = 98/153 (64.05%), Postives = 115/153 (75.16%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNA 459
LQ+RM VDF+LVDEFSM QD+LGLISAR KQAV GR D D DV GLSIILVGD QLPPVGA +WK PS+ LS+Q + WL+MNNAVELT+VMRQ GPEQAAFRDTLLRIA+G +T DDW L++ + A VG ER++F +A
Sbjct: 554 LQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6S7LJU9_PARCT (ATP-dependent DNA helicase (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LJU9_PARCT) HSP 1 Score: 177 bits (448), Expect = 9.670e-46 Identity = 118/382 (30.89%), Postives = 187/382 (48.95%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELT--QVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPIEAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
LQ+ + GV+++++DE+SM Q G + R KQA + V G S+IL GD GQLPPV K ++ PSS D+ Q + + AV+LT Q ++ + EQ FRD LLR+ KG T DDW L + + N+ F++A +F +N++ L + P +A H+ + ++ GL+P +FLA GA V + N+W+S GL NG G ++ + + PP V V +NYRGP + Q +PI PI + R + PL LA+ + I KSQG + ++++G E++ G + A R +TL + ++EP ER + +S + Q + + RL
Sbjct: 300 LQENLNGVEYIIIDEYSMLGQVTFGWVDKRCKQAT---------GCYNKVLGGKSLILFGDPGQLPPVADKPLYHAKPSS-DVGEQGYQTYRMFDKAVKLTVNQRVQGMNSEQVRFRDLLLRLRKGESTVDDWKLLLTRQPSAITNLSE--FEDATRLFYSNEQVANYNHDQLSK----LAQPVAHINARHSSAIAKKIASEDMSGLEPVVFLAKGAKVMLTMNLWSSVGLCNGATGTVIDFIFESNHRPPDLPVGVIVQFDNYRGP----SFDDTQPSCVPICPITVSSQSGNGFHER---QQLPLRLAWALTIHKSQGLTPSKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPMTYERLTSLKSSANLQFRLEEENRL 658
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A) HSP 1 Score: 176 bits (447), Expect = 1.070e-45 Identity = 123/389 (31.62%), Postives = 188/389 (48.33%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGP--EQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPI-------EAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
LQ+++ ++++L+DE+SM Q G I R KQA H V G+S+IL+GD GQLPPV K ++ PS+ + Q + + V+LT R G EQ FR+ LLR+ KG T DW L + + N+ F +A +F +ND+ ++L T P +A H+ ++ +D GLQP + +A GA V + N+W S GL NG G +V + +A D PP V V +NY+GP + +PI PI E V E R + PL LA+ + I KSQG L + ++++G EK+ G + A R +TL ++++EP ER I +S + + + RL
Sbjct: 344 LQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQAT---------GFHDKVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNP-IGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQPSCIENISE--FNDATRLFYSNDEVSA---YNLDQLTKLMEPCANI-NARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGP----SLREDLPMCVPICPITVSAQALEGVQE----------RQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRLEEESRL 702
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD) HSP 1 Score: 177 bits (450), Expect = 1.900e-45 Identity = 126/389 (32.39%), Postives = 184/389 (47.30%), Query Frame = 1
Query: 1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGP--EQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPI-------EAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
LQ + ++++L+DE+SM Q LG I R KQA R + GLS+IL+GD GQLPPV K ++ PS+ + Q + + AV+LT R G EQ FRD LLR+ KG T++DW L V N+ F NA +F +ND+ L P +A H+ + +D GL+P L+LA GA V + N+W S GL NG G ++ + + PP V V ++YRGP E +PI PI E V E R + PL LA+ + I KSQG L + ++++G EK+ G + A R +TL +++LEP ER + +S + + + RL
Sbjct: 1023 LQDNLKDIEYILIDEYSMLGQTTLGWIDKRCKQAKAIYNR---------IFGGLSVILIGDPGQLPPVADKPLYHAQPSNP-IGEQGYLAYKMFDMAVKLTVNQRVHGTSYEQQQFRDLLLRLRKGESTKEDWQLLLTRQPCSVENIA--DFNNATRLFYSNDEVSSYNHEQLNK----LQQPCANINARHSSTTAKNLPSDELSGLEPVLYLAKGAKVMLTMNLWASVGLCNGATGTVIDIIYELGHMPPDLPIAVIVKFDDYRGP----AFIEELQSCVPICPITASAQLFEGVHE----------RQQLPLRLAYALTIHKSQGLTLAKAWVDIGKSEKTPGVSYVAISRVKTLSSLVLEPMTFERLTSVKSSATLHYRLEEESRL 1381 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig205.18.3 >prot_P-littoralis_Contig205.18.3 ID=prot_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLback to top mRNA from alignment at P-littoralis_Contig205:137099..138347+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig205.18.3 ID=mRNA_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1249bp|location=Sequence derived from alignment at P-littoralis_Contig205:137099..138347+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig205:137099..138347+ >mRNA_P-littoralis_Contig205.18.3 ID=mRNA_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig205:137099..138347+ (Pylaiella littoralis U1_48)back to top |