mRNA_P-littoralis_Contig205.18.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig205.18.3
Unique NamemRNA_P-littoralis_Contig205.18.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 4.790e-146
Identity = 232/400 (58.00%), Postives = 280/400 (70.00%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
            LQ+RM  VDF+LVDEFSM  QD+LGL+SAR KQAV GR  D   D   DV  GLSIILVGD  QLPPVGA+ +WK  PS+  LS+Q +  WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW  L++ + A VG  ER++F +A +IFPTN  AD+     L S GTP         +A HT+H Y AV+++ FRGLQ H+FLA+GA VFV++ VW SAGLANG VGE+VHMQWAE   PP   EVVWV +ENYRGP         +W  GE++ T++ PIAP++ +D++PP  R        ARC R + PL LAFGI I KS G+ LLRC L++G  E+SDG  FTAF RCRTLEN+LLEPF LERFLKIG+S       SFQ RL AI
Sbjct:   32 LQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 420          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 443 bits (1140), Expect = 7.320e-144
Identity = 236/400 (59.00%), Postives = 282/400 (70.50%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
            LQ+RM  VDF+LVDEFSM  QDMLGL+SAR KQAV GR  D   D   DV  GLSIILVGD  QLPPVGA  +WK  PS+  LS+Q +  WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW  L++ + A VG  ER++F +A +IFPTN  AD+     L S GTP         +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+NVW SAGLANG VGE+VHMQWAE   PP   EVVWV +ENYRGP         +W  GE++ T++ PIAP++ +D++PP  R        ARC R + PL LAFGI I KSQG+ LLRC+L++G  E+SDG  FTAF RCRTLEN+LLEPF LERFLKIG+S       SFQ RL AI
Sbjct:  436 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 824          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 7.130e-115
Identity = 209/404 (51.73%), Postives = 259/404 (64.11%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRG------P*E--WGGGEVEQTDVIPIAPIEAVDEEPPAR------------RARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEP-FRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
            LQQ++ GVDFVLVDEFSM  QDMLG++S R KQAV GR      D H  +  GL II+VGD  QL  V    MW   P S+ LS Q ++ WL MN AV+LTQVMRQ G  QAAFR+TLLRIA+G  T  DW  L+  +T  V   ER+SF NA +IFPTN  AD+   W       T   P    DA+H++H Y  + +D FRGL+  LFLAVGA VF+N+NVWTS GLANG  GE+VHMQWA  + PP+  EVVWV +ENYRG      P E  WGG  V+  +V+PI+PI+A D+ PPA             + RC RT+ PL LAFGI I KSQG+ LLRC+L++G +EKSDG  FTA  RCR L+N+LL+P F LER  +IG S +F  +     R+R +
Sbjct: 1246 LQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADD-WNWRRLQALGT---PIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARLDALHRVREL 1645          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 1.160e-94
Identity = 166/266 (62.41%), Postives = 194/266 (72.93%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP 795
            LQ+RM  VDF+LVDEFSM  QDMLGL+SAR KQAV GR  D   D   DV  GLSIILVGD  QLPPVGA  +WK  PS+  LS+Q +  WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW  L++ + A VG  ER++F +A +IFPTN  AD+     L S GTP         +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+NVW SAGLANG VGE+VHMQWAE   PP   EVVWV +ENYRGP
Sbjct: 1177 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGP 1437          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 9.410e-86
Identity = 148/275 (53.82%), Postives = 185/275 (67.27%), Query Frame = 1
Query:  376 RTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPS-GTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*--------EWGGGEVEQTDVIPIAPIEAVDEEPPARR--------ARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRLRAI 1149
            +T DDW  L++ + A VG  ER++F +A +IFPTN  AD+     L S GTP         +A HT+H Y AV+++ FRGLQ H+FLA+GA VFVN+N W SAGLANG VGE+VHMQWAE   PP   EVVWV +ENYRGP         +W  GE++ T++ PIAP++ +D++PP  R        ARC R + PL LAFGI I KSQG+ LLRC+L++G  E+SDG  FTAF RCRTLEN+LLEPF LERFLKIG+S       SFQ RL AI
Sbjct:    2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIAR-----INATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDS------RSFQSRLNAI 265          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 2.200e-61
Identity = 105/165 (63.64%), Postives = 123/165 (74.55%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADE 495
            LQ+RM  VDF+LVDEFSM  QDMLGL+SAR KQAV GR  D   D   DV  GLSIILVGD   LPPVGA  +WK  PS+  LS+Q +  WL+MNNAVELTQVMRQ GPEQAAFRDTLLRIA+G +T DDW  L++ + A VG  ER++F +A +IFPTN  AD+
Sbjct:   56 LQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADD 220          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 3.750e-51
Identity = 98/153 (64.05%), Postives = 115/153 (75.16%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNA 459
            LQ+RM  VDF+LVDEFSM  QD+LGLISAR KQAV GR  D   D   DV  GLSIILVGD  QLPPVGA  +WK  PS+  LS+Q +  WL+MNNAVELT+VMRQ GPEQAAFRDTLLRIA+G +T DDW  L++ + A VG  ER++F +A
Sbjct:  554 LQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: A0A6S7LJU9_PARCT (ATP-dependent DNA helicase (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LJU9_PARCT)

HSP 1 Score: 177 bits (448), Expect = 9.670e-46
Identity = 118/382 (30.89%), Postives = 187/382 (48.95%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELT--QVMRQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPIEAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
            LQ+ + GV+++++DE+SM  Q   G +  R KQA            +  V  G S+IL GD GQLPPV  K ++   PSS D+  Q    +   + AV+LT  Q ++ +  EQ  FRD LLR+ KG  T DDW  L     + + N+    F++A  +F +N++        L       + P    +A H+      + ++   GL+P +FLA GA V +  N+W+S GL NG  G ++   +  +  PP     V V  +NYRGP      +  Q   +PI PI    +       R    + PL LA+ + I KSQG    + ++++G  E++ G  + A  R +TL + ++EP   ER   + +S + Q +   + RL
Sbjct:  300 LQENLNGVEYIIIDEYSMLGQVTFGWVDKRCKQAT---------GCYNKVLGGKSLILFGDPGQLPPVADKPLYHAKPSS-DVGEQGYQTYRMFDKAVKLTVNQRVQGMNSEQVRFRDLLLRLRKGESTVDDWKLLLTRQPSAITNLSE--FEDATRLFYSNEQVANYNHDQLSK----LAQPVAHINARHSSAIAKKIASEDMSGLEPVVFLAKGAKVMLTMNLWSSVGLCNGATGTVIDFIFESNHRPPDLPVGVIVQFDNYRGP----SFDDTQPSCVPICPITVSSQSGNGFHER---QQLPLRLAWALTIHKSQGLTPSKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPMTYERLTSLKSSANLQFRLEEENRL 658          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A)

HSP 1 Score: 176 bits (447), Expect = 1.070e-45
Identity = 123/389 (31.62%), Postives = 188/389 (48.33%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGP--EQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPI-------EAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
            LQ+++  ++++L+DE+SM  Q   G I  R KQA            H  V  G+S+IL+GD GQLPPV  K ++   PS+  +  Q    +   +  V+LT   R  G   EQ  FR+ LLR+ KG  T  DW  L     + + N+    F +A  +F +ND+      ++L   T    P     +A H+     ++ +D   GLQP + +A GA V +  N+W S GL NG  G +V + +A D  PP     V V  +NY+GP        +    +PI PI       E V E          R + PL LA+ + I KSQG  L + ++++G  EK+ G  + A  R +TL ++++EP   ER   I +S +   +   + RL
Sbjct:  344 LQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQAT---------GFHDKVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNP-IGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQPSCIENISE--FNDATRLFYSNDEVSA---YNLDQLTKLMEPCANI-NARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGP----SLREDLPMCVPICPITVSAQALEGVQE----------RQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRLEEESRL 702          
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD)

HSP 1 Score: 177 bits (450), Expect = 1.900e-45
Identity = 126/389 (32.39%), Postives = 184/389 (47.30%), Query Frame = 1
Query:    1 LQQRMTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGLSIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVMRQLGP--EQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAFYIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRGLQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEVVWVSMENYRGP*EWGGGEVEQTDVIPIAPI-------EAVDEEPPARRARCCRTRSPLTLAFGIAIDKSQGSALLRCYLNMGPREKSDGPCFTAFGRCRTLENVLLEPFRLERFLKIGNSDSFQGQNSFQGRL 1140
            LQ  +  ++++L+DE+SM  Q  LG I  R KQA     R         +  GLS+IL+GD GQLPPV  K ++   PS+  +  Q    +   + AV+LT   R  G   EQ  FRD LLR+ KG  T++DW  L       V N+    F NA  +F +ND+        L         P    +A H+      + +D   GL+P L+LA GA V +  N+W S GL NG  G ++ + +     PP     V V  ++YRGP        E    +PI PI       E V E          R + PL LA+ + I KSQG  L + ++++G  EK+ G  + A  R +TL +++LEP   ER   + +S +   +   + RL
Sbjct: 1023 LQDNLKDIEYILIDEYSMLGQTTLGWIDKRCKQAKAIYNR---------IFGGLSVILIGDPGQLPPVADKPLYHAQPSNP-IGEQGYLAYKMFDMAVKLTVNQRVHGTSYEQQQFRDLLLRLRKGESTKEDWQLLLTRQPCSVENIA--DFNNATRLFYSNDEVSSYNHEQLNK----LQQPCANINARHSSTTAKNLPSDELSGLEPVLYLAKGAKVMLTMNLWASVGLCNGATGTVIDIIYELGHMPPDLPIAVIVKFDDYRGP----AFIEELQSCVPICPITASAQLFEGVHE----------RQQLPLRLAYALTIHKSQGLTLAKAWVDIGKSEKTPGVSYVAISRVKTLSSLVLEPMTFERLTSVKSSATLHYRLEEESRL 1381          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.18.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDL6_9PHAE4.790e-14658.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE7.320e-14459.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE7.130e-11551.73ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE1.160e-9462.41ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE9.410e-8653.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDM0_9PHAE2.200e-6163.64ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KA18_9PHAE3.750e-5164.05ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6S7LJU9_PARCT9.670e-4630.89ATP-dependent DNA helicase (Fragment) n=1 Tax=Para... [more]
UPI000A2A6B3A1.070e-4531.62uncharacterized protein LOC110247455 n=1 Tax=Exaip... [more]
UPI000A2A83DD1.900e-4532.39uncharacterized protein LOC110235051 n=1 Tax=Exaip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig205contigP-littoralis_Contig205:137099..138347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog38033.XP_001226645.1
PFAMsHelitron_like_N,MULE,PIF1
Model size1149
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.31e-24
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,39RYU@33154|Opisthokonta,3P64X@4751|Fungi,3QU0F@4890|Ascomycota,21AWX@147550|Sordariomycetes,3UC2G@5139|Sordariales,3HG3S@35718|Chaetomiaceae
EC3.6.4.12
DescriptionBelongs to the helicase family
Cds size786
COG categoryL
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790001.0307498-UTR-P-littoralis_Contig205:137098..1371101680790001.0307498-UTR-P-littoralis_Contig205:137098..137110Pylaiella littoralis U1_48UTRP-littoralis_Contig205 137099..137110 +
1680790001.0758665-UTR-P-littoralis_Contig205:137996..1383471680790001.0758665-UTR-P-littoralis_Contig205:137996..138347Pylaiella littoralis U1_48UTRP-littoralis_Contig205 137997..138347 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790001.04128-CDS-P-littoralis_Contig205:137110..1376491680790001.04128-CDS-P-littoralis_Contig205:137110..137649Pylaiella littoralis U1_48CDSP-littoralis_Contig205 137111..137649 +
1680790001.0510805-CDS-P-littoralis_Contig205:137728..1379741680790001.0510805-CDS-P-littoralis_Contig205:137728..137974Pylaiella littoralis U1_48CDSP-littoralis_Contig205 137729..137974 +
1680790001.0671997-CDS-P-littoralis_Contig205:137995..1379961680790001.0671997-CDS-P-littoralis_Contig205:137995..137996Pylaiella littoralis U1_48CDSP-littoralis_Contig205 137996..137996 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig205.18.3prot_P-littoralis_Contig205.18.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig205 137111..137996 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig205.18.3

>prot_P-littoralis_Contig205.18.3 ID=prot_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp
MTGVDFVLVDEFSMASQDMLGLISARRKQAVRGRIRDENHDGHPDVSRGL
SIILVGDCGQLPPVGAKSMWKPTPSSTDLSVQRIHVWLAMNNAVELTQVM
RQLGPEQAAFRDTLLRIAKGTRTRDDWVFLQQTYTAQVGNVERDSFQNAF
YIFPTNDKADERCTWSLPSGTPTQSPPRTATDAEHTVHDYGAVTADSFRG
LQPHLFLAVGACVFVNSNVWTSAGLANGTVGEIVHMQWAEDSAPPTPLEV
VWVSMENYRGP*
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mRNA from alignment at P-littoralis_Contig205:137099..138347+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig205.18.3 ID=mRNA_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1249bp|location=Sequence derived from alignment at P-littoralis_Contig205:137099..138347+ (Pylaiella littoralis U1_48)
CTACAGCAGCGAATGACTGGCGTTGACTTCGTCCTCGTCGACGAGTTCTC CATGGCGAGCCAGGATATGCTTGGCCTCATTAGCGCCAGAAGGAAGCAGG CCGTCAGGGGCCGGATCCGAGACGAGAACCACGACGGACACCCCGACGTC TCCAGAGGCCTCAGCATCATCCTCGTTGGCGACTGCGGCCAGCTTCCTCC GGTCGGAGCAAAGTCGATGTGGAAGCCCACGCCTTCCTCCACCGACCTCA GCGTTCAAAGAATCCACGTATGGTTGGCGATGAACAACGCGGTTGAGCTC ACGCAGGTCATGCGCCAGCTTGGCCCTGAGCAGGCCGCTTTTCGTGACAC CCTCCTGCGCATCGCGAAGGGCACTCGGACTCGAGACGACTGGGTCTTCC TGCAGCAAACGTATACGGCACAGGTCGGGAATGTGGAGCGCGACTCATTC CAGAACGCTTTTTACATATTTCCGACGAACGACAAGGCCGACGAACGGTG CACTTGGAGCTTGCCCTCCGGAACACCCACGCAGAGTCCGCCCCGCACCG CGTCTCCTGCTCCGAGCACACAGTACACGGCTACGGCAGCGCTGGCAGCG GTTGAACATTTACTGAATGCCCATCGTAAGAACCGATGCCGAGCACACAG TGCACGACTACGGCGCGGTCACCGCTGACAGTTTCAGAGGCTTGCAGCCG CACCTTTTTCTCGCGGTCGGGGCGTGCGTTTTCGTCAACAGCAACGTCTG GACCTCGGCCGGCCTCGCCAACGGCACCGTCGGGGAGATCGTTCACATGC AATGGGCGGAGGACAGCGCCCCGCCAACACCGCTGGAAGTCGTGTGGGTG AGCATGGAGAACTATAGAGGGCCTTAGTATTTTGATTCGCTAAGAAGGGA GTGGGGCGGGGGGGAAGTTGAACAAACCGACGTCATCCCTATCGCGCCCA TCGAAGCCGTCGACGAGGAACCACCCGCGCGCAGGGCACGCTGCTGCAGG ACGCGGTCACCCTTGACGCTCGCCTTCGGCATCGCCATCGACAAGAGCCA AGGCAGCGCACTGCTGCGCTGCTACTTGAACATGGGACCCAGAGAGAAAA GCGACGGTCCGTGCTTCACTGCCTTTGGCCGGTGCCGTACCCTCGAGAAC GTGCTCCTTGAGCCCTTCAGGCTTGAGCGATTCCTCAAGATCGGCAACAG CGATTCCTTCCAAGGACAGAATTCCTTCCAAGGACGGCTCCGCGCCATT
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Coding sequence (CDS) from alignment at P-littoralis_Contig205:137099..138347+

>mRNA_P-littoralis_Contig205.18.3 ID=mRNA_P-littoralis_Contig205.18.3|Name=mRNA_P-littoralis_Contig205.18.3|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig205:137099..138347+ (Pylaiella littoralis U1_48)
ATGACTGGCGTTGACTTCGTCCTCGTCGACGAGTTCTCCATGGCGAGCCA
GGATATGCTTGGCCTCATTAGCGCCAGAAGGAAGCAGGCCGTCAGGGGCC
GGATCCGAGACGAGAACCACGACGGACACCCCGACGTCTCCAGAGGCCTC
AGCATCATCCTCGTTGGCGACTGCGGCCAGCTTCCTCCGGTCGGAGCAAA
GTCGATGTGGAAGCCCACGCCTTCCTCCACCGACCTCAGCGTTCAAAGAA
TCCACGTATGGTTGGCGATGAACAACGCGGTTGAGCTCACGCAGGTCATG
CGCCAGCTTGGCCCTGAGCAGGCCGCTTTTCGTGACACCCTCCTGCGCAT
CGCGAAGGGCACTCGGACTCGAGACGACTGGGTCTTCCTGCAGCAAACGT
ATACGGCACAGGTCGGGAATGTGGAGCGCGACTCATTCCAGAACGCTTTT
TACATATTTCCGACGAACGACAAGGCCGACGAACGGTGCACTTGGAGCTT
GCCCTCCGGAACACCCACGCAGAGTCCGCCCCGCACCGCAACCGATGCCG
AGCACACAGTGCACGACTACGGCGCGGTCACCGCTGACAGTTTCAGAGGC
TTGCAGCCGCACCTTTTTCTCGCGGTCGGGGCGTGCGTTTTCGTCAACAG
CAACGTCTGGACCTCGGCCGGCCTCGCCAACGGCACCGTCGGGGAGATCG
TTCACATGCAATGGGCGGAGGACAGCGCCCCGCCAACACCGCTGGAAGTC
GTGTGGGTGAGCATGGAGAACTATAGAGGGCCTTAG
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