mRNA_P-littoralis_Contig204.109.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 270 bits (691), Expect = 1.410e-83 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYIN 421
QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPR TIK+VCKYIN
Sbjct: 189 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYIN 328
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 272 bits (695), Expect = 2.920e-82 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYIN 421
QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPR TIKDVCKYIN
Sbjct: 236 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYIN 375
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE) HSP 1 Score: 214 bits (545), Expect = 5.280e-63 Identity = 113/140 (80.71%), Postives = 117/140 (83.57%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYIN 421
QAYSSLEVLKEER+ DVKQLE TRKAN VLSGCK FDLLNEASLVRHEA LLR+AAKVAG SPQAYAPSTILRWLRDFRKEGGFRRDARGAHE DWIMSEEDLK LLAWMI QPR+T+KDVCKYIN
Sbjct: 161 QAYSSLEVLKEERDSDVKQLECTRKANGVLSGCK--------------FDLLNEASLVRHEAPLLRIAAKVAGPSPQAYAPSTILRWLRDFRKEGGFRRDARGAHETDWIMSEEDLKGKLLAWMIPQPRVTVKDVCKYIN 286
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: D8LIV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV1_ECTSI) HSP 1 Score: 184 bits (467), Expect = 2.710e-53 Identity = 95/140 (67.86%), Postives = 112/140 (80.00%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYIN 421
Q Y +L+VL E RD KQL LT +ANEVL+G K TDAAV+E +A+RF+LLNEASLVR++ASLLR+AA V + YA STILRWLRDFRK+GGFRRD+RG HEPDWIMSEEDLK LL WM +Q RLT+KDV K+IN
Sbjct: 235 QGYCTLKVLVAELARDTKQLVLTVEANEVLAGSKGVTDAAVREGEAKRFELLNEASLVRYDASLLRIAANVVQTGSHPYAVSTILRWLRDFRKQGGFRRDSRGVHEPDWIMSEEDLKGQLLTWMRTQQRLTVKDVWKFIN 374
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 162 bits (409), Expect = 4.700e-43 Identity = 86/148 (58.11%), Postives = 111/148 (75.00%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINREIALREV 445
Q +S+L VLKEER+RD++QL+LT++A LS + T AVK A+A+RF+LLNEAS +RHE+SLLR+AA+V + + YA STIL WLRDFR GGF+ D+RG HE DWIMSEEDLK L+ WM Q RLT+KDV YIN+ + E+
Sbjct: 51 QGHSALTVLKEERKRDLRQLQLTQQAKS-LSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEI 197
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE) HSP 1 Score: 162 bits (409), Expect = 8.300e-43 Identity = 86/148 (58.11%), Postives = 112/148 (75.68%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINREIALREV 445
Q +S+L VLKEER+RD++QL+LT++A LS + T AVK A+A+RF+LLNEAS +RHE+SLLR+AA+V + + YA STIL WLRDFR GG +RD+RG HE DWIMSEEDLK L+ WM +Q RLT+KDV YIN+ + E+
Sbjct: 191 QGHSALTVLKEERKRDLRQLQLTQQAKS-LSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGSKRDSRGVHERDWIMSEEDLKDELVMWMRTQKRLTVKDVQNYINQWLFANEI 337
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.850e-42 Identity = 85/148 (57.43%), Postives = 111/148 (75.00%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINREIALREV 445
Q +S+L VLKEER+RD++QLELT++A LS + T AVK A+A+RF+LLNEAS RHE+SLLR+AA+V + + YA ST+L WLRDFR GGF+RD+R HE DWIMS+EDLK L+ WM +Q RLT+KDV YIN+ + E+
Sbjct: 149 QGHSALTVLKEERKRDLRQLELTQQAKS-LSDESYTTIPAVKAAEAKRFELLNEASRRRHESSLLRIAARVNSAGSRVYAASTVLGWLRDFRGHGGFKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEI 295
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5J8D7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D7_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.460e-42 Identity = 104/195 (53.33%), Postives = 112/195 (57.44%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINREIALREVVIRSKEFIEKMRKIQKAHRNILDMETSFLGDQ*QRRPADGEGGGSRV 586
QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKE DA+RFDLLNEASLVRHEASLLR+AAKVA + G RR AR +D C+ REIAL VVIRSKEFIEK RK QKAH + FL GGG+R+
Sbjct: 36 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKETDAKRFDLLNEASLVRHEASLLRIAAKVADK----------------YLTIGRVRRFARRT----------------------------RDYCR-AYREIALSGVVIRSKEFIEKTRKFQKAHATCWTWKLVFLATSNNVGRPMARGGGARL 185
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.860e-41 Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINREIALREV 445
Q +S+L VLKEER+RD++QL+LT++A LS + T AVK A+A+RF++L EAS RHE+SLLR+AA+V + + YA STIL WLRDFR GGF+RD+RG HE DWIMSEEDLK L+ WM Q RLT+KDV YIN+ + E+
Sbjct: 264 QGHSALTVLKEERKRDLRQLQLTQQAKS-LSDESYTTIPAVKAAEAKRFEVLIEASRRRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEI 410
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 156 bits (395), Expect = 9.320e-41 Identity = 83/135 (61.48%), Postives = 105/135 (77.78%), Query Frame = 2
Query: 2 QAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDV 406
Q +S+L VLKEER+RD++QL+LT++A LS + T AVK A+A+RF+LLNEAS +RHE+SLLR+AA+V + + YA STIL WLRDFR GGF+RD+RG HE DWIMSEEDLK L+ WM +Q RLT KDV
Sbjct: 320 QGHSALTVLKEERKRDLRQLQLTQQAKS-LSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAKDV 453 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig204.109.1 >prot_P-littoralis_Contig204.109.1 ID=prot_P-littoralis_Contig204.109.1|Name=mRNA_P-littoralis_Contig204.109.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp MAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLback to top mRNA from alignment at P-littoralis_Contig204:379102..379695+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig204.109.1 ID=mRNA_P-littoralis_Contig204.109.1|Name=mRNA_P-littoralis_Contig204.109.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=594bp|location=Sequence derived from alignment at P-littoralis_Contig204:379102..379695+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig204:379102..379695+ >mRNA_P-littoralis_Contig204.109.1 ID=mRNA_P-littoralis_Contig204.109.1|Name=mRNA_P-littoralis_Contig204.109.1|organism=Pylaiella littoralis U1_48|type=CDS|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig204:379102..379695+ (Pylaiella littoralis U1_48)back to top |