mRNA_P-littoralis_Contig203.96.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6H5L0V1_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V1_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.520e-72 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQVSARI 322
GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ ARI
Sbjct: 24 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ-RARI 129
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: D8LQX5_ECTSI (UBC core domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX5_ECTSI) HSP 1 Score: 224 bits (570), Expect = 4.220e-72 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct: 24 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA) HSP 1 Score: 219 bits (558), Expect = 2.640e-70 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
GP+ DDL+HWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct: 24 GPIGDDLFHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS) HSP 1 Score: 213 bits (541), Expect = 1.020e-67 Identity = 95/103 (92.23%), Postives = 102/103 (99.03%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DD++HWQATIMGPD+SPYAGGVFFL+IHFPADYPFKPPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct: 24 GPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQL 126
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.020e-67 Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DDL+HWQATIMGPDDSPY+GGV+FLNIHFPADYPFKPPKV FTT+IYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQ+
Sbjct: 24 GPVQDDLFHWQATIMGPDDSPYSGGVYFLNIHFPADYPFKPPKVAFTTKIYHCNINANGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAQI 126
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A7S2CNF0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNF0_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.020e-67 Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
GPV DDL+ WQATIMGPDDSPYAGGV+FLNIHFPADYPFKPPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA+
Sbjct: 24 GPVADDLFFWQATIMGPDDSPYAGGVYFLNIHFPADYPFKPPKVSFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAE 125
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6T8L654_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8L654_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.060e-67 Identity = 93/103 (90.29%), Postives = 102/103 (99.03%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DD++HWQATIMGPDDSPYAGGV+FL+IHFPADYPFKPPK++FTTRIYHCNINSNGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct: 4 GPVGDDMFHWQATIMGPDDSPYAGGVYFLDIHFPADYPFKPPKIHFTTRIYHCNINSNGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPDIAQL 106
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A397APW7_9STRA (UBC core domain-containing protein n=15 Tax=Stramenopiles TaxID=33634 RepID=A0A397APW7_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.470e-67 Identity = 95/103 (92.23%), Postives = 101/103 (98.06%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DDL+HWQATIMGP+DSPY+GGV+FLNIHFPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct: 51 GPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 153
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6G0WK77_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK77_9STRA) HSP 1 Score: 214 bits (544), Expect = 6.410e-67 Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DDL+HWQATIMGP+DSPYAGGV+FLNIHFPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct: 55 GPVGDDLFHWQATIMGPEDSPYAGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 157
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: M4BZ46_HYAAE (UBC core domain-containing protein n=27 Tax=Stramenopiles TaxID=33634 RepID=M4BZ46_HYAAE) HSP 1 Score: 210 bits (535), Expect = 2.530e-66 Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 2
Query: 2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
GPV DDL+HWQATIMGP+DSPY+GGV+FLNI+FPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct: 24 GPVGDDLFHWQATIMGPEDSPYSGGVYFLNIYFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig203.96.2 >prot_P-littoralis_Contig203.96.2 ID=prot_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=126bp MGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDback to top mRNA from alignment at P-littoralis_Contig203:378826..384051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig203.96.2 ID=mRNA_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5226bp|location=Sequence derived from alignment at P-littoralis_Contig203:378826..384051+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig203:378826..384051+ >mRNA_P-littoralis_Contig203.96.2 ID=mRNA_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=CDS|length=378bp|location=Sequence derived from alignment at P-littoralis_Contig203:378826..384051+ (Pylaiella littoralis U1_48)back to top |