mRNA_P-littoralis_Contig203.46.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A6H5JD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD01_9PHAE) HSP 1 Score: 598 bits (1543), Expect = 3.020e-191 Identity = 427/997 (42.83%), Postives = 503/997 (50.45%), Query Frame = 2
Query: 608 GGKRAYAVAFPDVGDPLALEQARALWNTLGAFKERGEDVVAMVPRYTGQHLEAPLEAIGYRVIARDSPAPLWRTSGRWVAQALTMISAGF----AAGGXXXXXXXXXXXXLLALEALALVEYEEVVVLDQKTVIFSREMK----------GNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------TLSSLVPGDDDWTAAFATAGDGSVLPNGPGLDFLAKEQRDLFSRQHPGLMAVRPDAGQYEALSELLCKGDDIIFSAYSDLPTNGPSRERY---------LQSVVSTIPLMHLAVASLSDSPADGGPAARTLPLEMCG---EGGTTQLPWPSSAAAAAQPVVWCPPAPASSQEPHEQRRSHR---------------SLLVVAGRS--------------------TGEET-----GDGXXXXXXXXXXXXXSIAVGSPSGGLLETPSSRG-----LGRXXXXXXXXKDGSWFTRRGSAEV-------------EAXXXXXXXXXXXXXXXXGAG----------------------------------GAALGFAWIPGDPCSCVDAPGMVGEACRGWLWARWAESPSRLLETLEEGVQSSS-----ILSVCGGDGRFSSPLQLPPPTRQQAALTATTSGASFASTWRTYLATQGDAGEGARVGTEAGEGSAVVPALPLPSQXXXXXXXXXXXXFWRTRKPEKEAVVTESDRRQFQHFWLASVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRRSYSVNFFKTDGIISFEKFVALTSKGAETRYCT------------SNPHWKPQFLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMMAGLGWWNESV 3169
G KRAYAVAFPDV DPL LE+ARAL N+LGA K E++VA+V RY+G+ L +PL GYRV+ RD+PAP WRTSGR+V QA+ AG+ A G LLALEAL+L EYEEVVVLDQK VIF + G G XXXX L L+P D WT FA AGD S +GPG++ L++ RDLF QH LM VRP+A Y+ +S LLCKGD + A+ G S ERY L T PL+HLAVA S +PL +CG E ++ W + AA PVVWCP S P QRR R S+ A RS G T GDG + + +E P RG L K G RG A XXXXXX GAG G A+ AWIP DPCSC DAPG VGEACRGWL AR A PSR E S LSVC DG F SPL LP ++AA A +GAS+ S R+ XXXXXXXXXXXX W+ KPE++AVVT++D FQHFWLA+VE K+L+VAIPKVACTQ+HALFLRL GSE WD+Q + IH+HKD KY L TM + A+ ILNDP+WTK VFLRDPAER+LSC+LDK+VHRRSYSVN FK + ++SFEKFV LTSK A+ R SNPHW+PQ FGLDKFLPYFDFVGDF+HVQ HSE L+ AGLW EFGASGWG G++ FFQRSTV+GH TGSHD QY TP LL+S+ EAY TDY+++A LGWWNE+
Sbjct: 95 GAKRAYAVAFPDVRDPLVLERARALRNSLGALKSDDEEIVAIVRRYSGKQLVSPLTDAGYRVLLRDTPAPPWRTSGRFVQQAMAATGAGWGSEGADDGVSGGGGSGHGWNLLALEALSLTEYEEVVVLDQKMVIFQAAEQPPRRALIGSDGGGTSIPHEAQVSGGQAPGREGGKGEEHRGQGRWRFLSSDGXXXXEQGGSESATADKLPPLLPEGDGWTIGFA-AGDKSAFASGPGVNSLSQAHRDLFFGQHAALMTVRPNAELYDEISHLLCKGDGLFDEAFP-----GRSGERYGDRLKRDNALSVKAPTTPLLHLAVAMASPRE-----TTAQVPLVICGGGIEAAAGEMEWKWTGAAL--PVVWCP-----SSAPFRQRRRRRLGQQDAEPAGDRGAMSVSGAAARSFATASLERNTLGRSGSRSDDAGRVTDFDVRGDGGRRGRWDKTEEGSFAPAIADATAAVEVPDDRGREERSLAGTGRLRSAPKSGGLLRERGGARGIGRRRLDGSDGGNSGXXXXXXDSAQRRGGEEGAGEEVKEXXXXXXXXXXXXXXXXXXXXVKIGDSNRVGNAVRLAWIPADPCSCTDAPGAVGEACRGWLMARAAGPPSRHSRGDGEAQAPSEDGLPVALSVCK-DGAFESPLPLPAVREEEAARAAQGAGASY-SARRSXX-------------------------XXXXXXXXXXXXXXXXXXLWQEVKPEQKAVVTQNDLDSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPAERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQQDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWKEFGASGWGRWGQAAFFQRSTVRGHATGSHDSFGQYYTPELLASVREAYADTDYKLLASLGWWNETA 1046
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI) HSP 1 Score: 475 bits (1222), Expect = 1.110e-145 Identity = 369/863 (42.76%), Postives = 447/863 (51.80%), Query Frame = 2
Query: 608 GGKRAYAVAFPDVGDPLALEQARALWNTLGAFKERGEDVVAMVPRYTGQHLEAPLEAIGYRVIARDSPAPLWRTSGRWVAQALTMISAGFAAGGXXXXXXXXXXXX---LLALEALALVEYEEVVVLDQKTVIFS-------REMKGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLSS-----------LVPGDDDWTAAFATAGDGSVLPNGPGLDFLAKEQRDLFSRQHPGLMAVRPDAGQYEALSELLCKGDDIIFSAYSDLPTNGPSRERYLQSVVSTIPLMHLAVASLSDSPAD-----GGPAARTLPLEMCGEGGTTQLPWPSSAAAAAQPVVWCPPAPASSQEPHEQRRSHRSLLVVAGRSTGEETGDGXXXXXXXXXXXXXSIAVGSPSGGLLETPSSRGLGRXXXXXXXXKDGSWFTRRGSAEVEAXXXXXXXXXXXXXXXXGAG-------GAALGFAWIPGDPCSCVDAPGMVGEACRGWLWARWAESPSRLLETLEEGVQSSS-------------ILSVCGGDGRFSSPLQLPPPTRQQAALTATTSGASFASTWRTYLATQGDAGEGARVGTEAGEGSAVVPALPLPSQXXXXXXXXXXXXFWRTRKPEKEAVVTESDRRQFQHFWLASVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRRSYSVNFFKTDGIISFEKFVALTSKGAETRYCT------------SNPHWKPQFLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFFQ 3022
G KRAYAVAFPDV DPL LE+ARAL N+LGA K E++VA+VPRY+G+ L +PL GYRV+ RD+PAP WRTSGR+V QA+ AG+ + G XXXXXXX LLALEAL+L EYEE+VVLDQK VIF R + G+ L L+P D WT FA AGD S +GPG++ L+ RDLF QH LM VRP+A Y+ +S LLCK + D G E S V A ASL + D A R ++ G+GG + + A + A + + P ++ R RSL + + DG +G GG S G XXXX + G T E XXXXXXXXXXXXXXX G A+ AWIP DPCSC DAPG VGEACRGWL +R A PSR E S LSVC D F SPL+LP + + XXXXXXXXXXXX W+ KP+++AVVT+ D FQHFWLA+VE K+L+VAIPKVACTQ+HALFLRL GSE W++Q + IH+HKD KY L TM + + A+ ILNDP+WTK VFLRDP ER+LSC+LDK+VHRRSYSVN FK + ++SFEKFV LTSK A+ R SNPHW+PQ FGLDKFLPYFDFVGDF+HVQ HSE L+ AGLW++FGASGWG G++ FFQ
Sbjct: 102 GAKRAYAVAFPDVRDPLVLERARALRNSLGALKNDDEEIVAIVPRYSGKQLVSPLTDAGYRVLPRDTPAPPWRTSGRFVQQAMAATGAGWGSEGANDGXXXXXXXHGWNLLALEALSLTEYEEIVVLDQKMVIFQSAEHLPRRALIGSDGGGSSIPREAQVPGGQAPGREGGKGEEHWWQGRWRFLSGDGSGGGELGGSESATADKLPRLLPEGDGWTIGFA-AGDKSTFASGPGVNSLSPAHRDLFFGQHAALMTVRPNAELYDEISHLLCKRRRL---GQRDTEPAGDRGE----SSVPGAAARSFATASLERNTLDRSGSRSDDAGRVTDFDIRGDGGRRGGRDKTEEGSFAPAMA---DATTAVEVPGDRGREERSLAGTGRLRSSPK--DGAMSRELGGARGIGRRRLGGSDGG------SSGDXXXXXXSAERRGGEEGTGEKVNEXXXXXXXXXXXXXXXXXXEEVKMGDSNRVGDAVRLAWIPADPCSCTDAPGAVGEACRGWLISRAAGPPSRHSRGDGEAQAPSESAGTPPGPDGLSLALSVCK-DRAFESPLRLP------------------------AVPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWQEVKPKQKAVVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN) HSP 1 Score: 155 bits (391), Expect = 1.370e-37 Identity = 100/287 (34.84%), Postives = 142/287 (49.48%), Query Frame = 2
Query: 2393 PEKEAVVTESDRRQFQHFWLASVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRR-----SYSVNFFKTDGIISFEKFVALTSKGAETR------YCTSNPHWKPQ-FLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGW----------------GPGGKSG-FFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMMAGLGWWNES 3166
P E + R QH V+ KLL A+PKVACT+ LF RL G E + + + HF +D+ + + + AT ++NDP+WTK F RDPAER+LS YLDK + + SY+V FK D ++F FV + R + +NPHW+PQ F+ ++KFLP ++FVG F H+ H+E LLR GLW+ +GA+GW G G G FQ++ T TP LL+ + AY DY M +G+ +
Sbjct: 25 PRAPLSYREQELRYAQHHMYVDVKHKLLYCAVPKVACTEFMRLFFRLKG-ENQNQRWKGDPHFRQDKPLFN----KIMNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFK-DKHMNFSGFVDRIASKNRVRGKPDGLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGWTKALKRTVVDKIKGAVGGGDDGGRMFQKNAAWHQTTKMKPENHDLYTPELLAKVRRAYA-MDYEMFDAVGFGGDE 304
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A7S4E7B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7B5_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.670e-35 Identity = 109/304 (35.86%), Postives = 148/304 (48.68%), Query Frame = 2
Query: 2387 RKPEKEAVVTESDRRQF-QHFWLASVEKKLLVVAIPKVACTQLHALFLRLLGS---------------EGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVH----RRSYSVNFFKTDGIISFEKFVALTSKGAETR------YCTSNPHWKPQ-FLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGW---GPGGKS---------GFFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMMAGLGWWNESVGLVG 3181
RKP+ + + H E KLL AIPKVACT+ LF R+ S E ++ + HF D K L + T + AT +ND ++TK VF RDPAER+LS YLDK H R Y + FK D ++F FV + + R + +NPHW+PQ F+ L+KFLP + FVG F H++ H+E +LR A LW+EFGA GW PGG FQ++T H G+ QY TP LL+ + +AY DY M+ ES+ +G
Sbjct: 50 RKPQLPHLQYRKHELDYASHHAYVDFEHKLLYCAIPKVACTEFFRLFHRMADSKKKCATVGQCATQMTERQRNRWKGDPHFRPD--KPILNKVA--TPEEATHAMNDKNFTKFVFFRDPAERLLSAYLDKFEHGSRYRVGYGLRIFK-DPKMNFSGFVERIERVNKRRSNPDGLHPHTNPHWRPQRFMCNLEKFLPLYTFVGSFTHLREHTELMLRQANLWEEFGARGWPLKAPGGSGKVPARGPTGSMFQKNTAW-HADGTSSKTEQYYTPELLARVRKAYA-MDYEML-------ESINALG 339
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A7S0TAN7_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAN7_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.590e-30 Identity = 88/253 (34.78%), Postives = 125/253 (49.41%), Query Frame = 2
Query: 2468 KLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVH------RRSYSVNFFKTDGIISFEKFVALTSKGAETR------YCTSNPHWKPQ-FLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPG-GKS-----------GFFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMMAGLG 3151
KL++ A+PKVACT+L L RL G W + HF D + ++ A +++ND SWTK +FLRDP R+ S YLDK V +Y + F +SFE F + R + +N HWKPQ ++ +KF + FVG +++++ H+E+LLR GLWD+FGASGW P GK+ F RS+ H TGS A PP L + + A DY + +G
Sbjct: 111 KLVLCAVPKVACTELIKLVYRLSGDPRWRR----DPHFRGDSPIF-----RKLSLAEANEMMNDDSWTKVIFLRDPLSRLASAYLDKFVQSPKRGIHANYGIRLFGES--LSFEAFARRVASNNTDRASHDGLHLGTNLHWKPQRYICSFEKFAHLYHFVGRYENIREHAESLLRALGLWDDFGASGWAPPLGKNHTPPASRVPRDSIFARSSS--HKTGSASKYADLYAPPGLEAAVRAAYSMDYDLFDAIG 350
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.810e-30 Identity = 103/365 (28.22%), Postives = 142/365 (38.90%), Query Frame = 2
Query: 2390 KPEKEAVVTESDRRQFQHFWLASVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLS----------------------------------------------------CYLDKIVHRRSYSVNFFKTDGIISFEKFV----------------------------------------------ALTSKGAETRYCTSNPHWKPQFLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFF--------------QRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMMAGL 3148
+P T++D QHFWL + KLL +AIPKVACTQ+ LFLR + + WD+ ++ NIHFH K+ T +TA T I+NDP WT+AV LR+P R+LS YLDK V SY +SF +FV A GA T +PH +PQ LF +DKFLPY +F+ ++ VQ H +L G+W+++GASGWG + +TVQ H T S + TP + ++ +Y DY M G+
Sbjct: 512 QPAAPVTATDADVVALQHFWLVNKRHKLLYLAIPKVACTQMIQLFLRAVNATDWDTDVMANIHFHSGNKRIRAKTQ--VTAAQLTAIMNDPQWTRAVVLREPRRRVLSLPCVRALFRPLRYPDKLVCGLLSPRRLPRVLTIVTNVRALWRLRDQLTQLPCAYLDKYVLHGSYGDRVRADKRYVSFHEFVEVXXXXXXXXXXXXXESTPVRXXXXXXXXXXXXXXXXXQVDTGMRLARRRTGAHP-LSTVDPHHRPQALF-MDKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWGRDKQQSXXXXXXXXXXXAIYQPNSNTVQRHSTNSEALHELFYTPEIEQMVMRSYA-IDYDMFPGI 871
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A8J2SW07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW07_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.130e-27 Identity = 93/257 (36.19%), Postives = 121/257 (47.08%), Query Frame = 2
Query: 2456 SVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRRS------YSVNFFKTDGIISFEKFVALTSKGAETRY------CTSNPHWKPQ-FLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWG----------------PGGKSGFFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYRMM 3139
S + K+ AIPKVACT+ L RL G W + HF D E + A ILND +WTK FLRDPA R LS YLDK V S Y + F + +++ +FV RY SN HWKPQ F L+KFL + F+G ++ ++ H+E LLR LWD +G+ GWG P S F Q++ H T + KA YLTP +LS + E Y DY M+
Sbjct: 146 SRKHKIAFCAIPKVACTEFIRLMYRLEGDVHWWK----DPHFRTDASTLLKRGDE----REAEHILNDANWTKVAFLRDPATRALSAYLDKFVDSPSRGIHGNYGLRHFGRE--LNWTEFVDTLGSENTDRYKPEGLHVGSNAHWKPQRFHCSLEKFLTKYQFIGRYESLRDHAEMLLRSLNLWDAYGSKGWGHRDKRQRLMPKPSDSIPVRDSLFAQKAK---HSTNADARKASYLTPSILSKLREIYA-MDYEML 388
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A7S2WJM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM7_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.390e-26 Identity = 72/201 (35.82%), Postives = 109/201 (54.23%), Query Frame = 2
Query: 2450 LASVEKKLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKI---VHRRS-YSVNFFKTDGIISFEKFVA-LTSKGAETRYCTSNPHWKPQF-LFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFFQRSTV 3034
+ ++ ++L+ AIPKVA ++ LFLRL G W ++ + K L ++ + A +IL DPS+ K VF RDP R+LSCYLDK HR + YS+ F + ++SF +F+ +T+ GA N HW+PQ + +++ + F G+F+ + H A L AGLW EFG SGWGPG F ++
Sbjct: 124 IVDLKHRVLICAIPKVASSEWKKLFLRLQGDPEWAAEPWW--------KMRNLTSLYKLGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFPEFLKKVTAAGAPM-----NVHWRPQADICQIEELFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPGENVSMFHENSA 311
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A1Z5J5F5_FISSO (Carbohydrate 4-sulfotransferase 9 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5F5_FISSO) HSP 1 Score: 119 bits (299), Expect = 2.820e-25 Identity = 76/232 (32.76%), Postives = 110/232 (47.41%), Query Frame = 2
Query: 2468 KLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRRSY--------SVNFFKTDGIISFEKFVALTSKGAETRYCTSNPHWKPQFLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFFQRSTV---QGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDY 3130
KL IPKV CT LF R++G W ++ N+ Q L + + A +I+ P WT+A+F+RDP ER++S YLDK V +Y S + + D S E F+ + K N HW PQ DK+ + +FVG +++ ++ LLR G W +GASGWG GG + FQ + H T +HD + ++ L IE Y DY
Sbjct: 118 KLAFFTIPKVGCTTWKQLFRRIMGYSNWATEEYVNMLPWNPQTN-GLKYLYDFPLEKANEIMTSPEWTRAIFVRDPKERLVSAYLDKGVGNPNYMREKCCGKSEDCIR-DASRSLESFLRVAMK-------CDNSHWSPQAKRIDDKYWSHINFVGRMENLADDAKRLLRQIGAWQRYGASGWGKGGNNSIFQTKAGGVGRHHATNAHDKLKEKISSAELEEAIEMYYAEDY 340
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Match: A0A7S3LEC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC1_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.510e-24 Identity = 76/245 (31.02%), Postives = 104/245 (42.45%), Query Frame = 2
Query: 2468 KLLVVAIPKVACTQLHALFLRLLGSEGWDSQILFNIHFHKDQKKYTLGTMEGITAKNATDILNDPSWTKAVFLRDPAERMLSCYLDKIVHRRSYSVNFF--------------------KTDGIISFEKF---VALTSKGAETRYCTSNPHWKPQFLFGLDKFLPYFDFVGDFQHVQAHSEALLRHAGLWDEFGASGWGPGGKSGFFQRSTVQGHGTGSHDHKAQYLTPPLLSSIIEAYGPTDYR 3133
KLL IPKV CT LF R+ G + W F H L + + A +L DPSWT+A+F RDP ER+LS YLDK++H V + +++F F + L K +PHW+PQ D + PY +FVG H++ ++ LL+ G WDEFGA GW G F + H T + + Y P L + E DY
Sbjct: 146 KLLFFTIPKVGCTVFKQLFRRMYGYQSWKEHNDFIPHHPMSNG---LNYLYHYKPREAERMLTDPSWTRAIFFRDPKERLLSAYLDKVLHENGKYVRVHCCGNNPSLKMLLHCQVLLDKLPNPLLTFADFLEKIVLQCK---------DPHWRPQAHRLPDLYWPYINFVGHMDHIEQDTKRLLQKIGAWDEFGAHGWESGA---IFSGAASVAHATDARQKVSSYYMSPQLIQLAEHLHKVDYE 375 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.46.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig203.46.4 >prot_P-littoralis_Contig203.46.4 ID=prot_P-littoralis_Contig203.46.4|Name=mRNA_P-littoralis_Contig203.46.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=953bp MKKMRRGSRVAGAVFASVVVLAVVTALGVLTGRLDPGLRLSSGGKDLAEDback to top mRNA from alignment at P-littoralis_Contig203:173178..189775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig203.46.4 ID=mRNA_P-littoralis_Contig203.46.4|Name=mRNA_P-littoralis_Contig203.46.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=16598bp|location=Sequence derived from alignment at P-littoralis_Contig203:173178..189775- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig203:173178..189775- >mRNA_P-littoralis_Contig203.46.4 ID=mRNA_P-littoralis_Contig203.46.4|Name=mRNA_P-littoralis_Contig203.46.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2859bp|location=Sequence derived from alignment at P-littoralis_Contig203:173178..189775- (Pylaiella littoralis U1_48)back to top |