mRNA_P-littoralis_Contig203.11.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE) HSP 1 Score: 525 bits (1352), Expect = 2.210e-178 Identity = 267/420 (63.57%), Postives = 334/420 (79.52%), Query Frame = 3
Query: 402 LGVVIIAVSIVWFGLLWRMYSLRHDFEIAARSPQLVILTGFSCYVMSTAVLLQWLLLNAGTSLPCWVVFVISYSIIGMGVIPFFIRMVRLVVAYNQAYRFKYARFVKWTPLVRVWAVAGTGLATRGVLFFESKPEHYSSNASQCFYFDDIFFMLGFMAVACVPAMMVARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNNGWTKKVLVPVEEDLGI-DDLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKFQARIKLEIEAKKEASRVQAKGDSQLLALMRLSQ 1658
LG V S+VW GLL R++ LRH+FEIAARSPQLVILTGF+CY++S +V++QW+LL GT++PCWVV +SY++ +G+IP+FIR+VRLVVAYNQ+YR K+ARFVKWTP++R+WA A GL R V FF SKP H+SSNA +CFYFDDI M G A VP +++ARSL+ VFDAFRIRQEMERAIGICM + +VLLQ+LV+ L +S +H AVE +AFLFG V H L+ PL+ H+K GW K ++PVE++ +D+ GV+ LA +GG+MA RFGRFVQENLCMESWDFI+DAV+YEM+ + + D+ +D FLI+LNQYLLP SPDEVNISSKMSKRMASFKTREAF L +EER IL EPLDEIVR+LEQNLLNKFQ+RI LE EAK+EA + +AKGD L+ALM++SQ
Sbjct: 12 LGAVAAVGSVVWIGLLVRLHVLRHEFEIAARSPQLVILTGFTCYLLSLSVVVQWMLLCVGTNIPCWVVIWVSYAVFALGIIPYFIRVVRLVVAYNQSYRAKFARFVKWTPMMRIWAGATIGLVLRAVFFFGSKPVHFSSNAHECFYFDDILLMTGACAFTGVPILLIARSLIHVFDAFRIRQEMERAIGICMSLSMVIVLLQVLVYFEVLADSSELHFAVEAMAFLFGIQVFTHGLMVPLLAHYKEYGWVKPSVLPVEDETSSNEDVDGVYALAVKGGDMADRFGRFVQENLCMESWDFILDAVKYEMESSCEPDDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTREAFTQLEQEERRGILKEPLDEIVRMLEQNLLNKFQSRIALEREAKREAQQAEAKGDPALMALMKVSQ 431
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE) HSP 1 Score: 266 bits (681), Expect = 1.020e-79 Identity = 154/321 (47.98%), Postives = 205/321 (63.86%), Query Frame = 3
Query: 645 PFFIRMVRLVVAYNQAYRFKYARFVKWTPLVRVWAVAGTGLATRGVLFFESKPEHYSSNASQCFYFDDIFFMLGFMAVACVPAMMVARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNN--GWTKKVLVPVEEDLGID--DLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQ----ITRD-QDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKFQARIKLE 1580
P+ IR VRLVVAYN+ YR KYARFVK + WAV GL R +FF + P HYSS+ +CFY+DDI M + P +A + +V DAF++R+E+ C + + ++Q+LV + L ++ +HV VE A L G N+ + LL P+V + W + +VPV+E + + D+ GV LA GGEMA++FG+F +ENLCMESWDF+VD V+YE I R+ +DE ++ FL ILN YLLP SPDE+NISS M KR+A F+TREAF L EER++I EP DEIVRVLEQNLLNKFQ I L+
Sbjct: 6 PYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVLWVIQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLGLEERVSIFKEPFDEIVRVLEQNLLNKFQKLIALD 326
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE) HSP 1 Score: 191 bits (485), Expect = 8.180e-50 Identity = 125/297 (42.09%), Postives = 172/297 (57.91%), Query Frame = 3
Query: 816 SNASQCFYFDDIFFMLGFMAVACVPAMM-VARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNN--GWTKKVLVPVEEDLGID--DLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQI-------------TR------------------------DQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKFQARIKLE 1580
S+ +CFY+DDI ++G M ++ P M +A + +V DAF+IR+E+ C A+ + ++Q+LV + L ++ +HV V+ A L G N+ I LL P+V + W + +VPV+E + + D+ GV LA GEMA++FG+F +ENLCMESWD +VD V+YE + TR +DE FL ILN YLLP SPDE+NISS M KR+A F+TREAF L+ EER++I EP DEIVRVLEQNLLNKFQ RI L+
Sbjct: 189 SDMRECFYWDDII-LVGVMILSSGPPMSCLAIRISRVNDAFKIREELCFVFIGCSCCAAVLWVIQVLVELDLLSDTSALHVVVQVQALLIGMNIGISGLLLPMVRTHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLSLEERVSIFKEPFDEIVRVLEQNLLNKFQKRIALD 484
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI) HSP 1 Score: 179 bits (455), Expect = 5.240e-48 Identity = 129/344 (37.50%), Postives = 164/344 (47.67%), Query Frame = 3
Query: 645 PFFIRMVRLVVAYNQAYRFKYARFVKWTPLVRVWAVAGTGLATRGVLFFESKPEHYSSNASQCFYFDDIFFMLGFMAVACVPAMMVARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNNGWTKKVLVPVEEDLGID--DLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYE-----MQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKFQARIKLEIEAKKEASRVQAKGDSQLLALMRLS 1655
P+FIR VRLV+AYN+ YR KYA+FVK V + L R LFF P HYSS +P R VQ W + +VPVEE + D GV LA GGE+AQ+FG+F QENLCMESWDF+VD V+YE + +DE +++FL ILNQYLLP SPDE+NISS MS R+ +F TR+AF L+ EER+ IL EP DEIVR+LEQNLLNKFQ R+ ++ EA+ A+ A GD L+ +++ S
Sbjct: 2 PYFIRAVRLVIAYNRKYRLKYAKFVKRKHATGVLVLTFIVLTIRAGLFFGDDPAHYSS--------------------LLLPMARAHRGGVQ--------------------------------------------------------------------------EWFRATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTRDAFNELSLEERIGILGEPFDEIVRMLEQNLLNKFQRRVAVDREAQLLAA---ADGDVDLVTVLKAS 248
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.760e-45 Identity = 98/177 (55.37%), Postives = 125/177 (70.62%), Query Frame = 3
Query: 1146 WTKKVLVPVEEDLGID--DLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEM----QITRD-QDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKFQARIKLEIEAKKEASRVQAKGDSQLLALMRLS 1655
W +VPVEE + D GV LA GGE+AQ+FG+F QENLCMESWDF+VD V+YE I D +DE +++FL ILNQYLLP SPDE+NISS MS R+ +F TREAF L+ EER+ IL EP DEIVR+LEQNLLNKFQ R+ ++ EA+ A+ A GD+ L+ +++ S
Sbjct: 12 WFGATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTREAFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVAVDREAQLLAA---ADGDADLVTVLKAS 185
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: A0A6H5JLH7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH7_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.740e-41 Identity = 110/314 (35.03%), Postives = 162/314 (51.59%), Query Frame = 3
Query: 654 IRMVRLVVAYNQAYRFKYARFVKWTPLVRVWAVAGTGLATRGVLFFESKPEHYSSNASQCFYFDDIFFMLGFMAVACVPAM-MVARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNNGWT---KKVLVPVE--------EDLGIDDLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKF 1559
+R VR+VV Y+ AYR+KYA VKWT L + WA + ++ + HY + F+ + I ++G MA+ P + L QV D +++R+E +L+Q+L G + E+ +H+ +E LA + + L +L + H +GW +VP E G GV A++GG +A F ++ +LC ESWDFIV A +YE D +E Y FL I +YL P SP EVNISSKM +M S + F +L+ + R N+L EPL E+VR+LE+NLLNKF
Sbjct: 2 LRAVRIVVIYHSAYRYKYAGLVKWTKLRKAWASITLLMVVVAIILYAISARHYRHDYGCAFFEETI--VIGTMALLNAPGFTFLLFKLSQVQDVYKLRREFTWVFNAVSSSTYVYILIQVLYKTGAVTETRTLHLVLEILALVIMLSFLFWMVLISVGIH---DGWRWFGTSTVVPTEGWAVSASNRSSGPTHGDGVLGYAQEGGSVASMFEQYCMRSLCAESWDFIVAACKYEE--ISDPEEQYKMFLRITEEYLRPTSPQEVNISSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEVVRMLEENLLNKF 308
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: A0A6H5KD71_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD71_9PHAE) HSP 1 Score: 135 bits (340), Expect = 1.880e-31 Identity = 97/273 (35.53%), Postives = 140/273 (51.28%), Query Frame = 3
Query: 780 VLFFESKPEHYSSNASQCFYFDDIFFMLGFMAVACVPAMM-VARSLVQVFDAFRIRQEMERAIGICMIFASAMVLLQLLVFVGELPESYGVHVAVETLAFLFGFNVLIHSLLTPLVTHFKNNGW----TKKVLVPVE--------EDLGIDDLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTREAFVALNEEERLNILSEPLDEIVRVLEQNLLNKF 1559
++ + HY + F+ + I +LG M + P + + L QV D F++R+E + S +L+Q+L G + E+ +H+ +E L + NVL +L + H +GW T +V VP E G GV A++GG +A F F +LC ESWDFIV A +YE D +E Y+ FL I +YL P SP EVNI SKM +M S + F +L+ + R N+L EPL EIVR+LE+NLLNKF
Sbjct: 6 IILYAISARHYRHDYGCAFFEETI--VLGTMMLLNAPGFVFLLYKLSQVQDVFKLRREFTWVFNVVSSVTSVYMLIQVLYKTGAVTETRTLHLVLEILTLVVMLNVLFWMVLISVAIH---DGWCWFGTPRV-VPTEGWAVSASTRSSGPTHGDGVLGYAQEGGSVASMFKHFCTRSLCAESWDFIVAACKYEE--ISDPEEQYEMFLRITEEYLQPTSPQEVNIGSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEIVRMLEENLLNKF 270
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 8.790e-21 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 3
Query: 1188 IDDLPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTR 1457
+ + GV L ++GG+M++RF + + NLC+ESWDF+VDA YEM D DE + F +I ++YLL SPDEVNISS SK +A+F+TR
Sbjct: 1 MSGVEGVLALVREGGDMSKRFEHYCKTNLCLESWDFLVDATLYEMMDATDADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: D7FYH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH3_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 6.870e-19 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 3
Query: 1197 LPGVHELAKQGGEMAQRFGRFVQENLCMESWDFIVDAVQYEMQITRDQDEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTR 1457
+ GV L ++GG+M++RF + + NLC+ESWDF++D YEM T DE + AF +I ++YLL SPDEVNI+ K MA+F+TR
Sbjct: 4 VEGVLALVREGGDMSKRFEHYCKMNLCLESWDFLIDRALYEMMDTTHADEQFMAFTMISDRYLLATSPDEVNIAGATRKHMAAFRTR 90
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Match: D8LQY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY9_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 9.900e-7 Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 3
Query: 1341 DEHYDAFLIILNQYLLPISPDEVNISSKMSKRMASFKTR 1457
+E +++FL ILNQYLLP SPDE+NISS MSK MA+F+TR
Sbjct: 162 EEQFNSFLYILNQYLLPTSPDEINISSAMSKHMATFRTR 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig203.11.2 >prot_P-littoralis_Contig203.11.2 ID=prot_P-littoralis_Contig203.11.2|Name=mRNA_P-littoralis_Contig203.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=449bp MIWVASLLGVVIIAVSIVWFGLLWRMYSLRHDFEIAARSPQLVILTGFSCback to top mRNA from alignment at P-littoralis_Contig203:45280..56406- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig203.11.2 ID=mRNA_P-littoralis_Contig203.11.2|Name=mRNA_P-littoralis_Contig203.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11127bp|location=Sequence derived from alignment at P-littoralis_Contig203:45280..56406- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig203:45280..56406- >mRNA_P-littoralis_Contig203.11.2 ID=mRNA_P-littoralis_Contig203.11.2|Name=mRNA_P-littoralis_Contig203.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1347bp|location=Sequence derived from alignment at P-littoralis_Contig203:45280..56406- (Pylaiella littoralis U1_48)back to top |