mRNA_P-littoralis_Contig202.8.30 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI) HSP 1 Score: 1420 bits (3677), Expect = 0.000e+0 Identity = 846/1153 (73.37%), Postives = 920/1153 (79.79%), Query Frame = 1
Query: 139 MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERMMAIKRGEFVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMPRGARKKKIYIGSGERAVPLTHEQELMSSIKHALMNAGREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQRRVALLAKEEEPKPLDRAALADAEK---KEAA----SRNTPSGSDKEVKGKGKSADEKETAADMEVDDEKAGNGAAVADKAVEDKDKAETD------------------------AKKELQNGGEEAGEEGDRQTTVAMKIAEYEAQVEAAKLATAEREKMQSSPPHFMQPHITLAYPSRDVRRDMHQLMMHAVRHSGNTPADKAKMLKVLPSLRAWMGGSLSWEQMTAGHKVSKVYNGAVVRGVGLLGAGGLVAVRKGCMVLLRRGEARVTAVKMGPAPANTPPAVPGGTPAEVLVEVEATMVSGGATVTATAKDILQFRPEGAASMPPSPLNEDSDSPRSNTGRNAA-SWNGGEGGDXXGGEAAGPVLPESDRMLLCTQELYVLMRIHHVLCERLGKAVTLAEDAKALKSMQKDHPQNPIVREGCETDEDKLMRALGLGVSLVGGNGHSKGKEVKSS------LSGYSGFLALLYAFTEQTNAELKLEDAVQLTVGNEAYMLFSYDKVMNTFLRQLKLVVDDDSSVKMLRLFDHQQAALGAFHPRRYLTACRKVLKSKVDNLFRLQWSSA-----------GSSTPDGPASLLMELVVPN 3450
MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHER +AI RG +S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HE GFGMPQR NEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQR XXXXXXXXXXXXXX V RMPRG+RKKK+YIGSG+RAVP T EQELMSSIKHALM+AGREYWDEFTKVLQLQKLEVLARDEML LV+DLLES+HPELYAEFKRMV EASQQGEV+++ SEMW+NTPLNELDLT SEKGGPSYRHLPKNFPLLSCSERTS+EQSVLND+WVSVPVGSEGGGSDVAFKH+RKNQHEDLLFKCEDERFELDMVIEAG++AI+LLEPME+EI ID TAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKT+PVILARLRQKDVEWRVSRERLNK+WS+VQRSTYYKSLDRRS D+KNED++A + + LVA IT RR ALLAKEEEPK LDRAALADA KEAA S VKG K E+QNGG +A EEG RQ V +A+++AQV+AAK A AERE+M+SS PHFMQ H+ L+YP VRRDMHQL++HAVRHS NTP+DK KM+K LPSLRAWMGGSLSWE MTAGH VSKVY+GA VRGVG G+G + ++ G MVLL RGEARVTAVK GPAPA+ PPAVPGG PA+V+VEVEATMVSGGA+VTA A +ILQ RPEG MPPSPL EDSDSPRS TG++AA SW+GG G G AGPVLPES+R+LLCTQELYVLMRIHHVLC+RLGKAV LAEDAKALK+ QKDHPQNPI+RE CETDE+K+MR+LGLGV G S G SS L GYSGFLALLYAFT+Q+N+ELKLEDAVQLTVGNEAYMLFSYDKV+N FLRQLKLVVDDDSS+KML+LF+HQ AALGAF P R L+ CRKVLKSKVDNLFRLQWS+A ASLL+ELVVPN
Sbjct: 1 MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERQLAISRG-------ASVMAGGGNMPMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHESGFGMPQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRAKVGGGXXXXXXXXXXXXXXXV---RMPRGSRKKKLYIGSGDRAVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKCEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKSLDRAALADAADAAAKEAAKACSSXXXXXXXXXXVKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEGARQAAVDKMVADHDAQVKAAKQAKAERERMESSAPHFMQTHVALSYPPSRVRRDMHQLLLHAVRHSSNTPSDKNKMIKALPSLRAWMGGSLSWEDMTAGHNVSKVYSGAGVRGVGTPGSG-VGDLKAGWMVLLGRGEARVTAVKKGPAPADAPPAVPGGNPADVVVEVEATMVSGGASVTAKAGEILQVRPEGVDVMPPSPLTEDSDSPRSTTGKDAAGSWSGGGGSR---GAGAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKVMRSLGLGVG--GSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ-AALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXXASLLIELVVPN 1136
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE) HSP 1 Score: 839 bits (2167), Expect = 4.560e-277 Identity = 497/745 (66.71%), Postives = 562/745 (75.44%), Query Frame = 1
Query: 1390 MVIEAGTNAINLLEPMEDEINAIDTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQRRVALLAKEEEPKPLDRAALADAEK---KEAA--SRNTPSGSDKEVKGKGKSADEKETAADM---------------------------EVDDE---KAGNGAAVADKAVEDKDKAETDAKKELQNGGEEAGEEGD---RQTTVAMKIAEYEAQVEAAKLATAEREKMQSSPPHFMQPHITLAYPSRDVRRDMHQLMMHAVRHSGNTPADKAKMLKVLPSLRAWMGGSLSWEQMTAGHKVSKVYNGAVVRGVGLLGAGGLVAVRKGCMVLLRRGEARVTAVKMGPAPANTPPAVPGGTPAEVLVEVEATMVSGGATVTATAKDILQFRPEGAASMPPSPLNEDSDSPRSNTGRNAA-SWNGGEGGDXXGGEAAGPVLPESDRMLLCTQELYVLMRIHHVLCERLGKAVTLAEDAKALKSMQKDHPQNPIVREGCETDEDKLMRALGLGVSLVGGNG----------HSKGKEVKSSLSGYSGFLALLYAFTEQTNAELKLEDAVQLTVGNEAYMLFSYDKVMNTFLRQLKLVVDDDSSVKMLRLFDHQQAALGAFHPRRYLTACRKVLKSKVDNLFRLQWSSAGSSTP---------DGPASLLMELVVPN 3450
MVIEAG++AINLLEPME+EI ID TAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKT+PVILARLRQKDVEWRVSRERLNK+WS+VQRSTYYKSLDRRS DLKNED++A + + LVA IT RR ALLAKEEEPKPLDRAALADA KEAA S G D+ GK E+ DE + N A+ + V+ + K K E+QNG +AGEEG+ RQ V +A++EAQV AAK A AERE+M+SS PHFMQ H+ L+YP VRRDMHQL++HAVRHS NTP+DK KMLK LPSLRAWMGGSLSWE MTAGH VSKVY+GA VRGVG G+G + ++ G MVLLRRGEARVTAVK GPAPA+ PP VPGG PA+V+VEVEATM+SGGA+VTA A +ILQ RPEG MPPSPL EDSDSPRS TG++AA +W+GG G G AGPVLPES+R+LLCTQELYVLMRIHHVLC+RLGKAV LAEDAKALK+ QKDHPQNPI+RE CETDE+KLMR+LGLG GG+ S GK L GYSGFLALLYAFT+Q+N+ELKLEDAVQLTVGNEAYMLFSYDKV+N FLRQLKLVVDDDSS+KML+LF+HQ AALGAF P R L+ CRKVLKSKVDNLFRLQWS+A SS+ D ASLL+ELVVPN
Sbjct: 1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRAALLAKEEEPKPLDRAALADAADAAAKEAAKASNXXSCGGDEXXXVTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIKDESNQEGTNDASSSSSPVKQQQKV----KAEIQNGDGKAGEEGEEGARQAAVDKMVADHEAQVMAAKQAKAERERMESSAPHFMQTHLALSYPPSTVRRDMHQLLLHAVRHSSNTPSDKNKMLKALPSLRAWMGGSLSWEDMTAGHNVSKVYSGAGVRGVGTPGSG-VGDLKAGWMVLLRRGEARVTAVKKGPAPADAPPTVPGGNPADVVVEVEATMMSGGASVTAKAGEILQVRPEGVGVMPPSPLTEDSDSPRSTTGKDAAGAWSGGGGAR---GAEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLG----GGDSPLAFSLAPPPSSDGKG--GGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ-AALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPSSSXXXXXSTAGEDEGASLLIELVVPN 730
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA) HSP 1 Score: 416 bits (1068), Expect = 7.460e-116 Identity = 431/1442 (29.89%), Postives = 554/1442 (38.42%), Query Frame = 1
Query: 121 PPGGPKMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERMMAIK-RGEFVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------------HEGGFG--MPQ--------------------------------------RTN--------------------------------EPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXS-----------------------------------------------------------VGGMRMPRGARKK--------------------------KIYIGS------------------------------------------------GERA--------VPLTH----------------EQELMSSIKHALM-NAGREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEAS------------------QQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPK--------------------NFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAI-DTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQK--------------------DVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQRRVALLAKEEEPKPLDRAALADAEKKEAASRNTPSGSDKEVKGKGKSADEKETAADMEVDDEKAGNGAAVADKAVEDKDKAETDAKKELQNGGEEAGEEGDRQTTVAMKIAEYEAQVEAAKLATAEREKMQSSPPHFMQPHITLAYPSRDVRRDMHQLMMHAVRHSGNTPADKAKMLKV----LPSLRAWMGGSLSWEQMTAGHKVSKVYNGAVVRGVGLLGAGGLVAVRKGCMVLLRRGEARVTAVKMGPAPANTPPAVPGGTPAEVLVEVEATMVSGGATVTATAKDILQFRPEGAASMPPSPLNEDSDSPRSNTGRNAASWNGGEGGDXXGGEAAGPVLPESDRMLLCTQELYVLMRIHHVLCE-----------RLGKAVTLAEDAKALKSMQKDHPQN------PIVREGCETDEDK-LMRALGLGVSLVGGNGHSKGKEVKSSLSGYSGFLA----LLYAFTEQTNAELKLEDAVQLTVGNEAYMLFSYDKVMNTFLRQLKLVVDDDSSVKMLRLFDHQQAAL---GAFHPRRYLTACRKVLKSKVDNLFRLQWSSA 3393
P G +REL+VEDALLYLDQVK+EFGDKPEIYNEFLDIMKNFKA AIDTPGVI RVS+LFRGYNKLILGFNTFLPDGYKIELSDIEEMNR H +A + + A S +A XXXXXXXXX G + G G MPQ RT+ E PAEFDHAI+YVTTIKKRFS EPQTYKAFLEILHTYQKEQRG G P+ R+K + +GS G R VP E+ ++ LM + GRE W EF K + + E+ R EML+LVADL H EL+A+FKR++ +T+++W +TPL E+D ++ K PSYR LPK ++P SCSER+ +E SVLND WVSVPVGSE + FKH+RKNQ+E+ LF+CEDERFE+DMVI++ T+ I LLEP+ +EI + + A YQFK+D+R L V L AITRIYGD GAE+LELLRKNP +P+IL RL+QK D EWR +R L++ W + TY+KSLDRRS K+ DRRA +AL+A I A A+E+ G T A + PHFM PH+ LAY R+V+RD H ++ AV +D+ +M ++ LP L W +W A + A R R GC V GE +V + GT L G + I + EG + +P ED++ S G GGEGG+ AG ++P S+ +LL TQELY+L+R+H ++ + ++ A E A ++ HP P+ L ++LGL S + G L Y GFLA LK ED VQ +GNEA+ LFS DK + T RQLK V DD S ++L L+ +Q+A GA Y L+ + D+++RLQ++ A
Sbjct: 21 PIAGRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLF-GPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSN---FKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEED---------------------------------------------------------------------------------GXXXXXXXXXXXTASAAAL----------------------GAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGW---GAAWLTAGAPXXXXXXXDDAGARAA-------QTQYRAGCPVFTAFGEGKVIDARGD------------GTHGVEL--------PGCGVIAVGPAHIFRILHEGPGAYA-NPRFEDNEFLDSGAGEG-----GGEGGE------AGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEG----------LCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQFTRA 1303
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A7S2SFF8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF8_9STRA) HSP 1 Score: 359 bits (921), Expect = 3.600e-98 Identity = 238/607 (39.21%), Postives = 310/607 (51.07%), Query Frame = 1
Query: 124 PGGPKMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERMMAIKRGEFVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMPQRTNEP--------------PAEFDHAITYVTTIKKRFSHEPQ-TYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMP-----------------------------RGARKKKIYIGS----GERAVPLTHEQELMSSIKHALMNAGREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTTAGARYQFK--MDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQR 1794
PGG + + L VEDAL YLD+VK +F DKPE+YN+FL+IMK FK+ IDTPGVI V LF+G++ LILGFNTFLP GYKIEL G + P + T +EGG G Q T P P EFDHAI YVT IKKRFS E TYK+FL+ILH+YQ E R +P R R KK + S E VP+ E+ L IK AL RE W EF K L L E+++R E+L L++D+ +L EF R++ + +G D W + PL ++D + + PSYR LP +P CSERT++ +SVLND WVSVP+GSE S K+ R+NQ+E+ LFKCED+R+E+DMVI++ AI LEP+ E+ A+ G+ ++F+ +++R LS + L AI RIYGDHG EILELLR+NP IPVIL RL++KD EW R+ LNK W Y KSLD RS K+ ++RA K LVA I ++
Sbjct: 219 PGGEQGKPLGVEDALAYLDRVKRQFMDKPEVYNQFLEIMKKFKSHEIDTPGVINHVCELFKGHDNLILGFNTFLPPGYKIELP-----------------GRGLPPGMAKITGPMGFTQPAMVPRGKVNRARGNRAGGKGPGRGSTPGGGMGVNEGGPGGMQPTMAPNVEDNASTAASQGQPVEFDHAINYVTKIKKRFSGENDPTYKSFLDILHSYQNEVRSITEVLEEVSNLFKDHPDLLKEFTHFLPDAVRESAAVELDKRAARARKASQRAANKDRRRRDKKSTLVSEPDHDETRVPML-ERNLFGRIKAAL--GTRELWGEFLKCLDLFAQELISRAELLSLISDIF-GERGDLLEEFDRLL---ASRGATDDPVESAWFSMPLTDIDFSNCRRCTPSYRALPAAYPKAPCSERTAMCRSVLNDTWVSVPLGSEDSSS----KNHRRNQYEEALFKCEDDRYEIDMVIDSNKAAIRALEPLAQEVEALSLKNGSNFKFRYRLEKRTLSVIHLKAIARIYGDHGTEILELLRRNPAAAIPVILKRLKEKDDEWCRDRQELNKGWKDQMEKNYAKSLDHRSFYFKHHEKRAYTQKVLVAEIKEK 797
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A1Z5JWN0_FISSO (Paired amphipathic helix protein Sin3a n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWN0_FISSO) HSP 1 Score: 353 bits (907), Expect = 1.250e-96 Identity = 231/646 (35.76%), Postives = 321/646 (49.69%), Query Frame = 1
Query: 103 RRAITVPPGGPKMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERM----MAIKRGEFVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMPQRTNEPP----AEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMPRGAR---KKKIYIGSGE---------------------------RAVPLTHEQELMSSIKHALMNA---------------------------GREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEI---------------NAIDTTA-GA-RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQR 1794
R A P +RELRVEDAL+YLD VK EF +P IYNEFL IMKNFK +DTPGVI RVS LFRGYNKLILGFNTFLP+GYKI L D+++ E + M +A K E P + A + + Q+ P EFDHAI+YVT IK+RF+++P Y FL+ILH YQ+EQRG +P + K++++ + E R + +T Q+ +S K +L + G + W EF K L + ++L+R EML V LL H +L+ EFKR++ A Q T E W + PL E+D ++ + PSYR LP+++P CS+R+ E VLND+WVS+PVGSE F+H+R+N +E+ LF+ EDERFE+DMV+++ + L P+ +EI ++ D T GA R+Q+ D + L + I+RIYGD G E+LEL+ KNP IP+++ RL+QKD EWR RERLN+ W + YYKSLD R +N D+RA + + +++ I R
Sbjct: 208 RLAAQAQPVQQPVRELRVEDALIYLDDVKREFKQQPAIYNEFLLIMKNFKTQEVDTPGVIERVSKLFRGYNKLILGFNTFLPEGYKISLEDLQKKEAEEQAMEAAEVASKTNE-APPVVAGPPAAKPAPIRKMAALPTAQVKAKSPPKPIKTAPVAAPVRSSPTLKAKAPVAQQPAPPQQHQAVEFDHAISYVTKIKRRFANDPSIYHQFLQILHNYQREQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESEHRKRQAEEIQEREIHRKSNSTDPSPRLIDMTRAQQEEASRKRSLEDPESCVYNSAVERQFFDATKEALTAYTRDGGQAWAEFLKCLDMYAQDILSRQEMLNFVEPLLGKRHTKLFEEFKRILASAGQPRP----TEESWYSVPLAEIDFSRCRRCSPSYRALPRDYPSHPCSDRSPEEAKVLNDVWVSLPVGSE---ESYTFRHMRRNTYEETLFRVEDERFEIDMVLDSNAATLQRLLPIAEEIAILAKEETLPLDIMASSSDATGLGAKRFQYTFDSKTLGVIHRNTISRIYGDSGGEMLELMVKNPTVAIPLVVQRLQQKDREWRAVRERLNRHWKELAELNYYKSLDHRGLTWRNIDKRATSTRIMISEIKDR 845
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A7S3P4U3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4U3_9STRA) HSP 1 Score: 353 bits (907), Expect = 4.960e-96 Identity = 241/674 (35.76%), Postives = 332/674 (49.26%), Query Frame = 1
Query: 130 GPKMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERM--MAIKRGE-----------------------FVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMPQRTNEPP----AEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXX------------SVGGMRMPRGA-----RKKKIYI----------------GSGERAVPLTH------------------------------------EQELMSSIKHALM---NAGREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEI------NAIDTTA------------GARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQR 1794
G MRELRVEDALLYLD VK EF ++P +YNEFL IMKNFK +DTPGVI+RVS LFRGYN+LILGFNTFLP+GYKI L+D+E ++ E ER +A++RGE V P+ S XXXXX + P+ T P EFDHAI+YVTTIK+RF+++P TY +FLEILHTYQKEQRG R+ R A R +K Y +R + +T E++ + AL G + W EF K L + E+L+R EML +V LL + +L+ EFKR++ A G + + W + PL+E+D ++ + PSYR LP+++P CS+R+ E VLND+WVS+PVGSE F+H+R+N +E++LF+ EDERFE+DMV+++ + L P+ +EI A+ A G R+Q+ D+ +L + +I RIYGD G E+L+L+ KNP IP+++ RLRQKD EWR R RLN W + YYKSLD RS + D+R + + +++ I R
Sbjct: 291 GMGMRELRVEDALLYLDDVKREFRNRPAVYNEFLTIMKNFKTQEVDTPGVIQRVSRLFRGYNRLILGFNTFLPEGYKISLADLERLDAERERQARLAVQRGEPPPEDVGLITLQSQPKQQQHPPLGVPPSAHQSQQNAAPARTKPSFPPXXXXXANAKTSTVATSANPPQARKEYAPKPPPQQPRATAAPAPTQAVEFDHAISYVTTIKRRFANDPSTYHSFLEILHTYQKEQRGIKEVLEQVAVLFQDHPDLLREFTFFLPDAVQDQAKERLNRAAADSESRLQKEYAMRQQQXXXXXXXXXXRAGHQRIIDMTEARAPAQDASGSARKRTLEHSVTAAQQPESYVYNSAVERQFFDFAREALTAYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNMVEPLLGKKNAKLFEEFKRILAAAGATGGSAPPLEDSWYSVPLSEIDFSRCRRCSPSYRALPRDYPPPPCSDRSDEEVKVLNDIWVSLPVGSE---ESYTFRHMRRNTYEEVLFRVEDERFEIDMVLDSNAATLQRLIPIAEEIAKLSQEEAVSVEAASKAPTEGAGMGGKRFQYSFDKNILGVIHRNSIARIYGDSGNEMLDLMVKNPTVAIPLVVERLRQKDKEWRNVRARLNVHWKDLAEQNYYKSLDHRSLTWRTIDKRTTSVRHMLSEIKDR 961
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: T0RRZ2_SAPDV (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRZ2_SAPDV) HSP 1 Score: 350 bits (899), Expect = 1.800e-95 Identity = 243/676 (35.95%), Postives = 323/676 (47.78%), Query Frame = 1
Query: 127 GGPK-MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRE-HERMMAIKRGE----------------------------FVDPADSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHE--------------GGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMPRG-----------------ARKKKIYIGSGER------------------------------------------------------------AVPLT----HEQELMSSIKHALMNAGREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVA 1779
G P+ +RELRVEDALLYLDQVK +FGD+P++YN+FLD+MK FK+ IDTPGVI+RVS LF+G+ LI GFNTFLP GY+I + + + +R + G ++P SS H G P P EFDHAI+YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ +P AR+ K+ + SG+ AV T E + IK L R+ W EF K L+L E++ RD+M+ LV +LL H ++ AEF ++++ GEV D E+W PL E DL++ + PSYR LP ++P+ S R+ +E++V ND WVSVP GSE D +FK++RKNQ+E+ LFKCEDERFE+DMVI+A + I +L P+ EI + T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P IPVIL RL QKD EWR +R+ LNK W V Y+KSLD S K +D++A + KAL+A
Sbjct: 194 GPPRPLRELRVEDALLYLDQVKQQFGDQPDVYNQFLDVMKEFKSQTIDTPGVIQRVSELFKGHPNLIFGFNTFLPPGYRIRPEHLGLYSADPRDRGFSAPPGNDGNPAPMGGLVLRPAPSATGNGPASSLPSINPPTQSSNAPLSNLGIRPPPVNIPGGNSASNTDQMLVAPVPSAANTTPSHRLTDAAKKAVPAKRGGAPATPAPAPPQPVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQDQARDRLHKAAERAQARQLKLQMTSGKEKKVGKKKDKKESPPQVASPKXXXXXXXXXXXXXXXRNKAAYALKRKQANKGDAKERRELLAVSNTLIDKEEWSIFEKIKKCL--PSRDNWREFLKCLELYSQEIVGRDDMIVLVKNLL-GRHTDVVAEFTQLLHT---HGEVKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLAATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 858
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A1V9ZFI4_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFI4_9STRA) HSP 1 Score: 349 bits (895), Expect = 3.880e-95 Identity = 264/687 (38.43%), Postives = 349/687 (50.80%), Query Frame = 1
Query: 94 QAQRRAITVPPG-----GP--KMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIE-----LSDIEEMNRE------HERMMAIKRGEFVDPADSS--------------------STTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMPQRTNEPPA------EFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMPRG-----------------ARKKKIYIGSG------------ERAVPLTHEQELMSSIK---------------HALMNA-------------------------------------GREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVA 1779
Q Q+ A PP GP ++RELRVEDALLYLDQVK +FGD+P++YN+FLD+MK FK+ IDTPGVI+RVS LF+G+ LI GFNTFLP GY+I L + +R ++ A G + PA ++ ST XXXXXXXXXXXXXXXXXXX G G PP EFDHAI+YVTTIKKRF+ EP TYK+FLEILHTYQKEQ +P AR+ K+ + G ++ P ++L +K +AL R+ W EF K L+L E++ RD+M+ LV +LL H ++ EF +++N GE+ D E+W PL E DL++ + PSYR LP ++P+ S R+ +E+SV ND WVSVP GSE D +FK++RKNQ+E+ LFKCEDERFE+DMVI+A + I +L P+ EI + T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P IPVIL RL+QKD EWR +R+ LNK W V Y+KSLD S K +D++A + K +A
Sbjct: 156 QNQQTAPAPPPNAANAQGPPRQLRELRVEDALLYLDQVKQQFGDQPDVYNQFLDVMKEFKSQTIDTPGVIQRVSELFKGHPNLIFGFNTFLPPGYRIRPEHLGLYAADPRDRTFNPPAGNDGNPAPMGGLVLRPAPTNAPXXXXXXSINAPSQPNAPLSTLRPPPVNIPGGDPQQMLLGQTXXXXXXXXXXXXXXXXXXXXXXNGPGKRNNAANPPTPAPQPVEFDHAISYVTTIKKRFADEPDTYKSFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLKEFTYFLPDAVQDAARIRLHTAAERAQARQLKLQMSGGKDKSFKGKKSGKDKMPPSPERKKLDDKLKGKDGKELLRERNKATYALKRKQGGKGDAKDRRELLSVSSTIIDKEEWSIFEKIKKCLPSRDNWREFLKCLELYSQEIVGRDDMIVLVKNLL-GRHTDVVEEFTQLLNT---HGEIKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERSVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLQATSPTGWQYVLDKGALRVTHLNAITRIYGESGHQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKEVNEKNYHKSLDHSSFYFKQKDKKATSTKVFLA 833
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A1V9YBI0_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBI0_9STRA) HSP 1 Score: 348 bits (893), Expect = 8.190e-95 Identity = 243/680 (35.74%), Postives = 328/680 (48.24%), Query Frame = 1
Query: 118 VPPGGPKMRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERMMAIKRGEFVDPAD-----------SSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHE----------GGFGMP--------------QRTNEP--------PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMPRG-----------------ARKKKIYIG-------------SGERAVPL------THEQELMSSIKHALMNAG-----------------------------------------------REYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVA 1779
VPP ++RELRVEDALLYLDQVK +FGD+P++YN+FLD+MK FK+ IDTPGVI+RVS LF+G+ LI GFNTFLP GY+I + +R +G P S +++ G G P +R+N P P EFDHAI+YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ +P AR+ K+ + +G+ A P + E M + K +L + R+ W EF K L+L E++ RD+M+ LV +LL H ++ AEF ++++ GE D E+W PL E DL++ + PSYR LP ++P+ S R+ +E+ V ND WVSVP GSE D +FK++RKNQ+E+ LFKCEDERFE+DMVI+A + I +L P+ EI + T+ +Q+ +D+ L L AITRIYG+ G +ILELLRK+P IPVIL RL+QKD EWR +R+ LNK W V Y+KSLD S K +D++A + KAL+A
Sbjct: 185 VPPR--QLRELRVEDALLYLDQVKQQFGDQPDVYNQFLDVMKEFKSQTIDTPGVIQRVSELFKGHPNLIFGFNTFLPPGYRIRPEHLGLYTDPRDRAFNASQGSEPAPVGGLMLRPAPVGASGPSSSLPSINPPPSQANAPMSNLRPPPINIAGGGASDPASMLLGQSATPPQPAPSTGAAATPNHRQGDAAKSKVPAKRSNPPSAPVPAPQPVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQETARDRLYKVAERAQARQHKLAMAGKDKKAGKKGKDKTGKEAPPTPSSPKKSAEPSKMKTEKESLRDRNKAAYALKRKQGAKGDAKDRRELLAVSSTIIDKEEWSIFEKIKKCLPSRDNWREFLKCLELYSQEIVGRDDMVVLVKNLL-GRHTDVVAEFTQLLHT---HGEAKD-QHEIWPFIPLAETDLSQCRRATPSYRALPASYPIPPSSSRSKMERLVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILMPLAKEIETLAATSPNGWQYVLDKGALRVTHLNAITRIYGEAGPQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 853
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Match: A0A1E7F083_9STRA (HDAC_interact domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F083_9STRA) HSP 1 Score: 343 bits (880), Expect = 3.530e-94 Identity = 255/679 (37.56%), Postives = 343/679 (50.52%), Query Frame = 1
Query: 139 MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLILGFNTFLPDGYKIELSDIEEMNREHERMMAIK--------------RGEFVDPA-DSSSTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHEGGFGMP-------------------QRTNEP--PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXXXSVGGMRMP------------RGA------------RKKKIYIGSGERAVPLTH------------------------------------------EQELMSSIKHALMNA---GREYWDEFTKVLQLQKLEVLARDEMLRLVADLLESSHPELYAEFKRMVNEASQQGEVSDVTSE-MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVEQSVLNDMWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGTNAINLLEPMEDEINAIDTT---------------------AGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILARLRQKDVEWRVSRERLNKVWSSVQRSTYYKSLDRRSQDLKNEDRRAQAPKALVAGITQR 1794
MRELRVEDALLYLD VK EFG KP +YNEFL IMKNFK+ +DTPGVI RVS LFRG N LILGFN FLPDGYKI + D+ +M++ + R I+ + + P D A XXXXX XXXXXXXXXXXXXX + +P Q+ N+P EFDHAI+YVTTIK+RF+++ TY +FLEILHTYQKEQRG +P R A +K K GS + V +T E++ + K AL + G + W EF K L + E+L+R EML V LL + +L+ EFKR++ A QG + + E W + PL+E+D ++ + PSYR LP+++P CS+R+ E+ VLND+WVS+PVGSE F+H+R+N +E+ LF+ EDERFE+DM I++ + LLEP E+ + G R+++ D +L + +ITRIYGD G E+LELL+ NP IP+++ RLRQKDVEW+ R+RLN+ W + + YYKSLD RS + D+RA + + L+ I R
Sbjct: 1 MRELRVEDALLYLDDVKREFGGKPRVYNEFLAIMKNFKSQEVDTPGVIARVSKLFRGNNHLILGFNKFLPDGYKISMEDLRQMDQAYAREEEIQLPPSHMAGPLSQQLQQQHQPPIQDVQMKQAQANRQRMQVATDLQEQQXXXXXIPXXXXXXXXXXXXXXXRKVHDVIPPXXXXXXXXXXXXXXXXXIQQQNQPHQAVEFDHAISYVTTIKRRFANDQSTYHSFLEILHTYQKEQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESESRLSAQKDKKNKQLQGSSKEIVDMTEHPIPVDQTEARGQKRYHKDVQEAPVVITYPQTPETFVYNSAVERQFFDAAKEALASYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNFVEPLLGKRNNKLFEEFKRILAAAGGQGTNTVPSMEDSWYSVPLSEIDFSRCRRCSPSYRALPRDYPAPPCSKRSDEERMVLNDVWVSLPVGSE---ESYTFRHMRRNTYEETLFRVEDERFEIDMTIDSNLCTLALLEPFAQEMAQLSGNDGQMQIDKENESKTNMEQKGLGGKRFRYTFDPTILGVIHRNSITRIYGDAGEEMLELLKTNPSVAIPIVVDRLRQKDVEWQKVRDRLNRHWKEMAENNYYKSLDHRSLTWRTTDKRAISNRTLLTDIKDR 676 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.8.30 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig202.8.30 >prot_P-littoralis_Contig202.8.30 ID=prot_P-littoralis_Contig202.8.30|Name=mRNA_P-littoralis_Contig202.8.30|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1390bp MRELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRback to top mRNA from alignment at P-littoralis_Contig202:23256..58426- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig202.8.30 ID=mRNA_P-littoralis_Contig202.8.30|Name=mRNA_P-littoralis_Contig202.8.30|organism=Pylaiella littoralis U1_48|type=mRNA|length=35171bp|location=Sequence derived from alignment at P-littoralis_Contig202:23256..58426- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig202:23256..58426- >mRNA_P-littoralis_Contig202.8.30 ID=mRNA_P-littoralis_Contig202.8.30|Name=mRNA_P-littoralis_Contig202.8.30|organism=Pylaiella littoralis U1_48|type=CDS|length=4170bp|location=Sequence derived from alignment at P-littoralis_Contig202:23256..58426- (Pylaiella littoralis U1_48)back to top |