mRNA_P-littoralis_Contig202.54.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: A0A6H5KHT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT9_9PHAE) HSP 1 Score: 212 bits (540), Expect = 6.820e-61 Identity = 178/374 (47.59%), Postives = 220/374 (58.82%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGAGA-IPLDGRGLTPLHLAAREAHAGVVEILL-DAGADARARCVVDGLQLPLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMALIAAGADF--RPLDTHYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAWFDFAPAIDFLVASGANLEATFDDTGVTPFHGASQSAGNLAAIAAXXXXXXXXXXXXXXXXXXXXXXXAENCYFEGSPGTVDALLKAGADETLVNAAGQTPADLLE--FTVDDKGWSNEAVERTLTLL 1104
+H A+ LG++ +VSLLLEHGA I DG G+TPL LAA+E H VV LL DA D R G + LDLAA+GGH DVIS R ++++ T TG++A+ HAA H+ V SID LV AGANLE +D GCT L VAA +AA A++ A AL+AAGAD R YS L+ A+ S +DL ++Q G+ +E +S G T LHWA W A A+D LV +GA+LEA D VTP H A++ AGN XXXXXXXXXXXXXXXXXXXXXXX +NC E S TVDALLKAGADET ++ GQTP D+LE V D +N A E T ++L
Sbjct: 23 LHLASGLGHDLVVSLLLEHGADPNIDTDGDGMTPLLLAAKEGHVRVVVALLSDARVDVGQRHGAGG-RSALDLAAIGGHADVISAIVERQPDVLDSTSDDTGFSALHHAANHDAVHSIDALVKAGANLENRDAEGCTPLRVAAGCAS-EAAXXXXXXXXXXXXXXXXXXXXXXXDAMENDLWGIATALMAAGADVNVRRGSNGYSPLDCAVRSGGMDLTRQVLQRGAIATE--SASDGCTALHWAGWNMNASAVDLLVGAGADLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAVGDVVGAN-AAEHTRSML 391
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: D7G0W1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W1_ECTSI) HSP 1 Score: 166 bits (419), Expect = 5.920e-44 Identity = 159/375 (42.40%), Postives = 199/375 (53.07%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGAGA-IPLDGRGLTPLHLAAREAHAGVVEILL-DAGADARARCVVDGLQLPLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMALIAAGADFRPLD--THYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAWFDFAPAIDFLVASGANLEATFDDTGVTPFHGASQSAGNLAAIAAXXXXXXXXXXXXXXXXXXXXXXXAENCYFEGSPGTVDALLKAGADETLVNAAGQTPADLLEFTV---DDKGWSNEAVERTLTLL 1104
+H A+ LG++ +VSLLL+HGA I DG G+TPL LA++E H VV LL DA D R +G LD V AGANLE +D GCT L VAA +AA+ ALL+HG KE + LTPL A++ A AL+AAGAD D YS L+ ++ S +DL ++Q G+ + +S G+T LHWA W A A+D LV GA+LEA G TP H A++ AGN XXXXXXXXXXXXXXXXXXXXXXX +NC + S TVDALLKAGADET ++ GQTP D+LE + D G S ERT ++L
Sbjct: 21 LHRASGLGHDLIVSLLLKHGADPNIDTDGDGMTPLLLASKEGHVRVVVALLSDARVDIGQRHG-EGGHSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAGANLENRDAKGCTPLRVAAGCAS-EAALLALLRHGDDKESTGVDGLTPLQDAMENDLWGIATALMAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATA--SASDGYTALHWAGWNMNASAVDLLVEVGADLEAKVALDGCTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTIKSSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASANEAERTRSML 391
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.240e-35 Identity = 113/298 (37.92%), Postives = 161/298 (54.03%), Query Frame = 1
Query: 4 HH---AARLGYEPLVSLLLEHGAGAIPLD-----GRGLTPLHLAAREAHAGVVEILLDAGADARARCVVD----------------GLQLP---LDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGC-TALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMALIAAGADFRPLDTHYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAWFDFAPAIDFLVASGANLEATFDDTGVTP 813
HH A R+ + +VSLLLE GA A P D TP+HLAA+ AG+V +L+DAGA A RC + G+++ L A+GGHVDVI +R ++ +TGY A+ +AA+H+Q+ ID LV AGA+LE + G TALHVAA PD +A + ALL+HGA + + N TPL VA++ + +A AL++AGAD R L ++E D++ L+ G+ + +S G TPLH AA F +D L+ +GA+ E + G TP
Sbjct: 92 HHLQVALRICDKAMVSLLLELGADADPEDHWTYGDLFFTPIHLAAKAGQAGIVGMLMDAGACAD-RCANEDASTWEQRYDPEYDWSGIRMTENALHFGAIGGHVDVIDEIIKRQPLTMSSVAESTGYTALHYAAKHSQLGVIDALVEAGADLEAEGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVRE-----HLLRESVECSQHDMLLALLGRGAHVNTK-GASDGNTPLHLAAEKSFRVKVDVLLQAGAD-ETAVNHKGQTP 381
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 113 bits (282), Expect = 2.490e-25 Identity = 79/188 (42.02%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 559 IAAGADFRPLD--THYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAWFDFAPAIDFLVASGANLEATFD-DTGVTPFHGASQSAGNLAAIAAXXXXXXXXXXXXXXXXXXXXXXXAENCYFEGSPGTVDALLKAGADETLVNAAGQTPADLLEFTV---DDKGWSNEAVERTLTLL 1104
+AAGAD D YS L+ ++ S +DL ++Q G+ +E SS G T LHWA W A AID LV +GANLEA D TP H A++ AGN A I A A+NC E S TVDALLKAGADET ++ GQTP D+LE + D G S ERT ++L
Sbjct: 1 MAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATE--SSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIAADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVL 186
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.570e-16 Identity = 81/259 (31.27%), Postives = 119/259 (45.95%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGAGAIPLDGRGLTPLHLAAREAHAGVVEILLDAGADARARCVVDGLQLP-LDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMA----LIAAGADFRPLDT-----------HYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAW 729
+H AA G E V+ LL GA LD +G TPLHLA H V+ LL A D R + LDLAA G V+ + +++ T+ GY ++ AA +N+VA+IDVLV AGA++E++D CT + A C A AL +HG+ E + TPL++A ++ A L+ GAD L+ H + + ++ V L++N +P + GF L A W
Sbjct: 42 LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTD---GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF-LDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLEN--APVDRAWRRRGFLVLCRAFW 294
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.970e-16 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGAGAIPLDGRGLTPLHLAAREAHAGVVEILLDAGADARARCVVDGLQLP-LDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMALI 561
+H +A G E V+ LL GA LD +G TPLHLA H V+ LL A D + LD AA G V+ + +++ T+ GY ++ AA +N+VA+IDVLV AGA++E++D CT + A S C A AL +HGA E + TPL++A ++ A++
Sbjct: 91 LHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTD---GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF-LDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIV 274
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: A0A2V8L3T8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8L3T8_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 3.900e-14 Identity = 91/287 (31.71%), Postives = 133/287 (46.34%), Query Frame = 1
Query: 46 LLEHGAGAIPLDGRG-LTPLHLAAREAHAGVVEILLDAGADARARCVVDGLQLPLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEI-------------LNNEELTPLLVAIQKGHEASAMALIAAGAD-FRPLDTHYSALELAI-------------ESKSI-DLVNVLIQNGSSPSEPLDSSG--GFTPLHWAAWFDFAPAIDFLVASGANLEATFDDTGVTP 813
L++HGA + RG T L AA H +V++L++ GAD RAR D PL AA G V+ ++ + A M AA N S+ +L+ GAN +L D G TALH AA+ V+ALL HGA ++++ TPL +A G+ + ALIA GAD F D + L +A E K++ ++ +L+ G+ ++S+G G+T LH AA+ + FLV GA +E FD+ G TP
Sbjct: 13 LVDHGANVNVKESRGGQTALMWAAANKHPEIVKLLVEHGADVRARSKGDFT--PLLFAAQQGDVESGRTLLGAGADVNENRRKDRMTALMVAAASGNNEFSV-LLLEKGANPDLADEIGYTALHYAASDEKRVDVVKALLAHGANPNARTTRDAPRTNNSGVSSKGATPLFLAASLGNVETVRALIAGGADPFVTTDEKTAPLHVATWGGNPYNRDWTEEEKKNLFEVTKLLLGLGAD----VNSAGEQGWTALHGAAYKGLDSVVRFLVEKGAKMEV-FDEYGQTP 291
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: A0A2V8DR59_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DR59_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 1.980e-13 Identity = 76/234 (32.48%), Postives = 112/234 (47.86%), Query Frame = 1
Query: 202 PLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEI-------------LNNEELTPLLVAIQKGHEASAMALIAAGAD-FRPLDTHYSALELAI-------------ESKSI-DLVNVLIQNGSSPSEPLDSSG--GFTPLHWAAWFDFAPAIDFLVASGANLEATFDDTGVTP 813
PL A+ G V + + +++ + + T A M AA N+ S+ L+ GAN +L D GG TALH AA+ D V ALL HGA+ + +N TPL +A +GH + AL+A GAD F D + L +A E K++ D+ +L++ GS+ ++S G G+T LH AA+ + FLV GA +E FD+ G TP
Sbjct: 192 PLLFASQQGDVQSGRLLLQAGVDVNDRSSTDRKTALMVAAASGNRAFSV-FLLEKGANPDLSDDGGFTALHYAASDKDGADIVRALLMHGAHPNLRTTRDSREYVYAGVNLTGATPLFLAASRGHVETVRALVAGGADPFITTDNGTAPLHVATWGGSPYFRDWTEDEKKNLFDITKLLVELGSN----VNSVGEHGWTALHGAAYKGVDGVVRFLVEHGARMEV-FDEYGQTP 419
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: UPI00201F5B46 (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F5B46) HSP 1 Score: 80.5 bits (197), Expect = 1.080e-12 Identity = 78/272 (28.68%), Postives = 137/272 (50.37%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGAGAIPLDGRG---LTPLHLAAREAHAGVVEILLDAGADARARCVVDGLQLPLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRH---AAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNN---EELTPLLVAIQKGHEASAMALIAAGADFRPLDT-HYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGG--FTPLHWAAWFDFAPAIDFLVASGANL 780
+H A + G +V +L G + ++ RG +TP+ LAA + H VVE+L+ GAD + G L LA GG+V+V+ ++ +N + G+ M AA+ +++LV GA++ L D G T LH+A + + V+ +L G + +N+ +E+TP+++A KGH+ L++ GAD LD H + L LA + ++++V ++ G ++S G TP+ AA ++ LV+ GA++
Sbjct: 284 LHLACKGGNVEVVKFVLS--LGMLSINSRGWQEMTPVMLAADKGHKEVVELLVSKGADVS--LLDKGHDTLLHLACKGGNVEVVKFVLSLGMQSIN----SRGWQEMTPVMLAADKGHKEVVELLVSKGADVSLLDKGHDTLLHLACKGGNVEV-VKFVLSLGM--QSINSRGWQEMTPVMLAADKGHKEVVELLVSKGADVSLLDKGHGTLLHLACKGGNVEVVKFVLSLGMLS---INSRGWQEMTPVMLAADKGHKEVVELLVSKGADV 541
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 5.740e-12 Identity = 96/360 (26.67%), Postives = 151/360 (41.94%), Query Frame = 1
Query: 1 IHHAARLGYEPLVSLLLEHGA--GAIPLDGRGLTPLHLAAREAHAGVVEILLDAGADARARCV-VDGLQLPLDLAAMGGHVDVISVFTRRDLEIVNDTETATGYAAMRHAAEHNQVASIDVLVGAGANLELQDTGGCTALHVAAASPDCKAAVEALLQHGAYKEILNNEELTPLLVAIQKGHEASAMALIAAGADFR-----PLDTHYSALELAIESKSIDLVNVLIQNGSSPSEPLDSSGGFTPLHWAAWFDFAPAIDFLVASGANLEATFDDT--GVTPFHGASQSAGNLAAIAAXXXXXXXXXXXXXXXXXXXXXXXAENCYFEGSPGTVDALLKAGADETLVNAAGQTPADLLEFT 1050
+ HAA G LV LL GA GA RG T L AA + VV LL +G + V + + L +A++ GH + VN + ++ A E +D+L+ GA + G T LH+AAAS + + L + L++ ++PL+VA + GH ++ AL+ AGAD +A+++A+ + ++ +++NG + + G T LH A A A+D L+ +GA++ A G TP A +A + + G VD LL+ GA ET VN G TP+D+L+ T
Sbjct: 38 LEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGAD-VNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRAT--DTYGLTALHHARG---AQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLS---RGMDRMVDLLLRWGASETAVNKNGLTPSDILKVT 388 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig202.54.1 >prot_P-littoralis_Contig202.54.1 ID=prot_P-littoralis_Contig202.54.1|Name=mRNA_P-littoralis_Contig202.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=368bp IHHAARLGYEPLVSLLLEHGAGAIPLDGRGLTPLHLAAREAHAGVVEILLback to top mRNA from alignment at P-littoralis_Contig202:216040..217143+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig202.54.1 ID=mRNA_P-littoralis_Contig202.54.1|Name=mRNA_P-littoralis_Contig202.54.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1104bp|location=Sequence derived from alignment at P-littoralis_Contig202:216040..217143+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig202:216040..217143+ >mRNA_P-littoralis_Contig202.54.1 ID=mRNA_P-littoralis_Contig202.54.1|Name=mRNA_P-littoralis_Contig202.54.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1104bp|location=Sequence derived from alignment at P-littoralis_Contig202:216040..217143+ (Pylaiella littoralis U1_48)back to top |