mRNA_P-littoralis_Contig202.40.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig202.40.2
Unique NamemRNA_P-littoralis_Contig202.40.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 596 bits (1536), Expect = 1.290e-196
Identity = 371/604 (61.42%), Postives = 417/604 (69.04%), Query Frame = 2 
Query:  239 MEVIESIGGLVSSMLDFPLANFLGRLLPAGGSEAGQQVATAFGAGLHNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYNGKGVGDGXXXXXXXXXXXXXHYHRTDC-GDSAAVVHVDGCHIAVAXXXXXXXXXXXXXXDDKAGTG-------AGKPCMCARIAALQRQRASIARRLRATEDERKLKRLVAGR----IRSMNLSVN-HLQQLRASVDASWSSLATAWDARRVRGNSSSSRSSRSQEAAGGERERAKTVPLP-LSRFEMPPCPHHSHTSSRPHSMGGGVQQQQERRVPNAASYSVGKEKNTLPKAEAGCAECSAIAAAHLTAAS-----LLHGSIQDGNVATDGGGGTGGFLLSGEDEVYDLWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQGWKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQSLPSLAPGTGSTRS------SHARSSGSSIGXXXXXXXXLCMLASTAQRFREGRALAKREARAVH 1975
            ME IE +GG+V+S+L+FPL  FLGRL+P GGSEAGQQVATA G GL NLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVY   G G G              YHRT   G SA VVHVDGCH+A+AXXXXXXXXXXXXXX               GKPCMCARIAA QRQRAS ARRLR  EDER+L+ LVAGR    IR ++LS N HLQQLRASVDASWSS +TAWDARR RG+ S S         GG        PLP  + F MPPC   +H  + P   G G               +V + + TL  AEA C EC+AIAAAH+ A +                    G GT         +V D+WAGSSLGVL  DAL R + FL P+DLLELAQ S GAREAADSQLVWREVWWARFG +WESE+CKKAARRWHLH+W+PKSSAVTQGW+EFFFEFEA+WLEW+AAGQN ESSCLVGVHGRL+DIT+FMHRHPGSPETLM+NAGADASE FED+GHSLDAR LM+SL SLAPG  +  +      S  R S +S G         CML+STAQR R+GRALA+REA+AVH
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVGVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGGAGAGGR-----------RYHRTGGDGGSAVVVHVDGCHVAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGKPCMCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSANNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTD------GGG--------PLPPAAGFVMPPC---THRGAPPAGSGRG-----------RGHTAVEQGERTLA-AEAECPECAAIAAAHVLAGAGAXXXXXXXXXXXXXXXXXQGRGT---------DVVDVWAGSSLGVLNADALQRALTFLEPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQGWREFFFEFEATWLEWLAAGQNFESSCLVGVHGRLYDITDFMHRHPGSPETLMENAGADASEFFEDVGHSLDARGLMKSLDSLAPGCAAAGADAGGGGSKWRGSSAS-GARGNVSGGACMLSSTAQRIRKGRALARREAKAVH 554
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: D7FI17_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI17_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 4.150e-77
Identity = 176/330 (53.33%), Postives = 206/330 (62.42%), Query Frame = 2 
Query:  707 MCARIAALQRQRASIARRLRATEDERKLKRLVAGR----IRSMNLSVN-HLQQLRASVDASWSSLATAWDARRVRGNSSSSRSSRSQEAAGGERERAKTV---PLP-LSRFEMPPCPHHSHTSSRPHSMGGGVQQQQERRVPNAASYSVGKEKNTLPKAEAGCAECSAIAAAHLTAASLLHGSIQDGNVATDGGGGTGGFLLSGEDEVYDLWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQGWKEFFFE-FEASWLEWIAAGQNLES----SCLVG 1654
            MCARIA  QRQRAS ARRLR  EDER+L+RLVAGR    IR ++LSVN HLQQLRASVDASWSS +TAWDARR RG+ S S         GG    AK     PLP  + F MPPC H       P + G G              ++  +E      AEA C EC+AIAAAH+ A +    +   G +    G GT         +V+D+WAGSSLGVL  DALHR + FL P+DLLELAQ S GAREAADSQLVWREVWWARFG +WESE+CKKAARRWHLH+W+PKSSAVTQ  + F      A+W  W A G+   S    +C+VG
Sbjct:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTE------GGGLHSDAKATAAPPLPPAAGFVMPPCTHRG----APPAAGSG----------RGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGA--ATTGGRLQQQQGRGT---------DVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ--RSFILRCVGATWSCW-AGGKCWVSMLLIACVVG 296
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: D7FI18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI18_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 5.730e-38
Identity = 94/130 (72.31%), Postives = 102/130 (78.46%), Query Frame = 2 
Query:  239 MEVIESIGGLVSSMLDFPLANFLGRLLPAGGSEAGQQVATAFGAGLHNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYNGKGVGDGXXXXXXXXXXXXXHYHRTDCGDSAAVVHVDGCHIAVA 628
            ME IE +GG+V+S+L+FPL  FLGRL+P GGSEAGQQVATA   GL NLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVY     G GXXXXXXXXXXXXX             VHVDGCH+A+A
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVY-----GKGXXXXXXXXXXXXXXXXXXXXXXXXXXVHVDGCHVAMA 125
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A835Z6K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K8_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.770e-38
Identity = 82/186 (44.09%), Postives = 115/186 (61.83%), Query Frame = 2 
Query: 1274 GFLLSGEDEVYDLWAGSS-LGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQGWKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFE-----DIGHSLDARRLMQSLPSL 1813
            G L  G   V   + G+S L +LP+D   R +A L P+DL ELAQ S G + AAD++ +W  +W  RFG VW S+  + AA RWH H WDP   A  QGWK FF +F  SW+ W AAG N E  C++G++G L+++T+F+  HPGSP+TL+D+AG DA++        + G +  +  L QS PS+
Sbjct:   81 GLLPEGCRPVSHNFDGASFLPLLPDDLRLRCLALLQPEDLFELAQASKGCQAAADAEPLWAGLWQYRFGRVWASQPLQDAAERWHCH-WDPLRHAPLQGWKLFFSQFALSWIGWAAAGSNTEERCILGINGALYNVTDFLMEHPGSPDTLLDSAGCDATQRTRLPATVNAGSARTSPVLTQSKPSM 265
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A7S2FKK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKK9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.430e-37
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 2 
Query: 1304 YDLWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADS------QLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQGWKEFFFEFEASWLEWIAAGQNLES---SCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQSL 1804
            YD+ +  +LG LP + +     FL    L  +A V        DS      +  W+  W  RFG  WES + + AA R H H WDP        W+ FFFE+E SWLEW  AGQN+E+    CL+GV+G ++D++ F+  HPG+PET++DNAG D +E FED+GHS  ARR M+SL
Sbjct:  198 YDVVSDLTLGCLPVETVLLTFDFLDLASLFSIAAVDQALNSLCDSTDTAFNECAWKSQWLRRFGAHWESSLMQAAAERHHSH-WDPSQPPPGGSWRRFFFEYEESWLEWSCAGQNVENVNQGCLIGVYGTVYDVSFFLDEHPGTPETILDNAGGDTTEFFEDVGHSTSARRRMKSL 372
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A7S3Y614_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y614_HETAK)

HSP 1 Score: 149 bits (375), Expect = 6.270e-35
Identity = 72/170 (42.35%), Postives = 106/170 (62.35%), Query Frame = 2 
Query: 1292 EDEVYDLWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDP-KSSAVTQGWKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQ 1798
            E+E++D         + ++ L  V +FL P+DL+ L Q   G  ++  + LVW++ W  RFG +  +   KK    W + +W+       +QGWK FFFEFEASW+  +AAG +  SSCL+G+ G L+DIT F+  HPGSPETL++NAG D ++ F ++GHS  ARRLM+
Sbjct:   84 ENELWDS--------MHQNQLIHVSSFLQPEDLVRLGQTCKGGNKSCQTDLVWKKQWENRFGKLIVTNAWKKCLEFWDI-SWEVFVRKPPSQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMR 244
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: W7TKW6_9STRA (Cytochrome b5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKW6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.580e-31
Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = 2 
Query: 1337 LPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQG-----WKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQSLPSLAP---GTGSTRSSHARSSGSSIGXXXXXXXXLCMLASTAQRFREGRA 1945
            LP++    +V +L P+D+L L  VS  AR   + + VWR  W ARFG +W S   +KA         D + ++ T G     W+ F+  FE  W  W+ AG+N E SC VG+ G ++D+T F+  HPGS ET++ NAG DA+  F+D+GHS  AR +M     + P   G G T +                    C+L S  +  REGRA
Sbjct:  305 LPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGEGEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPPPPQGVGHTEA--------------------CVLHSVKEALREGRA 495
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A7S3Y620_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y620_HETAK)

HSP 1 Score: 132 bits (331), Expect = 1.080e-29
Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 2 
Query: 1406 VSNGAREAADSQLVWREVWWARFGVVWESEVCKKAARRWHLHNWDP-KSSAVTQGWKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQ 1798
            +  G  ++  + LVW++ W  RFG +  +   KK    W + +W+       +QGWK FFFEFEASW+  +AAG +  SSCL+G+ G L+DIT F+  HPGSPETL++NAG D ++ F ++GHS  ARRLM+
Sbjct:   55 LGKGGNKSCQTDLVWKKQWENRFGKLIVTNAWKKCLEFWDI-SWEVFVRKPPSQGWKRFFFEFEASWINMVAAGHDTLSSCLIGIEGGLYDITNFIDLHPGSPETLLENAGRDVTQFFNEVGHSATARRLMR 185
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A7S2SV73_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV73_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.100e-26
Identity = 71/190 (37.37%), Postives = 97/190 (51.05%), Query Frame = 2 
Query: 1310 LWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQ----LVWREVWWARFGVVWESEVCKKAARRWHLHNWDPK--------------SSAVTQG--WKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGADASEIFEDIGHSLDARRLMQSLPSLAP 1819
            LW    L  LP D    V+ FL    LL +A  S  A +  DS       WR+ W  RFG +W +   + A +R H  +W P               S     G  W+ FF+EF+ +W++W   G N  + CLV +HG ++D+T+F   HPGS ETL+DNAG DA+ +FE +GHS  ARR M  L  + P
Sbjct:  216 LW----LDKLPHDGSLHVLGFLDRMSLLPVALTSRLAAQLCDSPHFEGCAWRDRWLRRFGHLWSTREIQAALQR-HGVSWFPSTGLHEAEARNGPAGSFGAPNGLSWRRFFYEFDEAWMDWALVGMNTPARCLVALHGTIYDLTQFKQEHPGSVETLLDNAGGDATPMFEGVGHSRVARRQMAQLVRIEP 400
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BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Match: A0A7S2B084_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B084_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.960e-25
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 2 
Query: 1328 LGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADSQ------LVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSS---AVTQGWKEFFFEFEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAG 1735
            L +L  D +  ++ F+  + +L LA   +      D+        VWR+ W ARFG +W S++  +A +R   + WDPK     A  +GWK FFFEF  +W+ W  A QN    CL+G+HG ++++T+F+  HPGSP+T++DNAG
Sbjct:   18 LSLLGTDTVMLLIEFVDLRAVLSLAGTCSFLSHLCDNNETRHCNCVWRQRWTARFGSIWTSDLVSQAVKR-DGNAWDPKGGCPPAGCKGWKAFFFEFNETWINWTLAMQNTTECCLIGLHGGVYNMTDFLEVHPGSPDTILDNAG 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.40.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFP0_9PHAE1.290e-19661.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI17_ECTSI4.150e-7753.33F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FI18_ECTSI5.730e-3872.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6K8_9STRA7.770e-3844.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FKK9_9STRA2.430e-3743.18Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y614_HETAK6.270e-3542.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TKW6_9STRA5.580e-3136.02Cytochrome b5 n=2 Tax=Monodopsidaceae TaxID=425072... [more]
A0A7S3Y620_HETAK1.080e-2945.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SV73_9STRA1.100e-2637.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B084_9STRA2.960e-2537.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig202contigP-littoralis_Contig202:168983..175463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr49358
PFAMsCyt-b5
Model size3695
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.44e-23
EggNOG OGsCOG5274@1|root,KOG0537@2759|Eukaryota,2XD69@2836|Bacillariophyta
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-00_000690.1
DescriptionCytochrome b5-like Heme/Steroid binding domain
Cds size2055
COG categoryCI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789991.5697637-UTR-P-littoralis_Contig202:168982..1703841680789991.5697637-UTR-P-littoralis_Contig202:168982..170384Pylaiella littoralis U1_48UTRP-littoralis_Contig202 168983..170384 -
1680789991.6133544-UTR-P-littoralis_Contig202:175225..1754631680789991.6133544-UTR-P-littoralis_Contig202:175225..175463Pylaiella littoralis U1_48UTRP-littoralis_Contig202 175226..175463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789991.5800843-CDS-P-littoralis_Contig202:170384..1711131680789991.5800843-CDS-P-littoralis_Contig202:170384..171113Pylaiella littoralis U1_48CDSP-littoralis_Contig202 170385..171113 -
1680789991.592376-CDS-P-littoralis_Contig202:171677..1728921680789991.592376-CDS-P-littoralis_Contig202:171677..172892Pylaiella littoralis U1_48CDSP-littoralis_Contig202 171678..172892 -
1680789991.6033556-CDS-P-littoralis_Contig202:175114..1752251680789991.6033556-CDS-P-littoralis_Contig202:175114..175225Pylaiella littoralis U1_48CDSP-littoralis_Contig202 175115..175225 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig202.40.2prot_P-littoralis_Contig202.40.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig202 170385..175225 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig202.40.2

>prot_P-littoralis_Contig202.40.2 ID=prot_P-littoralis_Contig202.40.2|Name=mRNA_P-littoralis_Contig202.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=685bp
MEVIESIGGLVSSMLDFPLANFLGRLLPAGGSEAGQQVATAFGAGLHNLG
SLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYNGKGVGDGGGRNGGG
GSGGGGHYHRTDCGDSAAVVHVDGCHIAVAAAAAAAAAGAEAPADDKAGT
GAGKPCMCARIAALQRQRASIARRLRATEDERKLKRLVAGRIRSMNLSVN
HLQQLRASVDASWSSLATAWDARRVRGNSSSSRSSRSQEAAGGERERAKT
VPLPLSRFEMPPCPHHSHTSSRPHSMGGGVQQQQERRVPNAASYSVGKEK
NTLPKAEAGCAECSAIAAAHLTAASLLHGSIQDGNVATDGGGGTGGFLLS
GEDEVYDLWAGSSLGVLPEDALHRVVAFLPPQDLLELAQVSNGAREAADS
QLVWREVWWARFGVVWESEVCKKAARRWHLHNWDPKSSAVTQGWKEFFFE
FEASWLEWIAAGQNLESSCLVGVHGRLFDITEFMHRHPGSPETLMDNAGA
DASEIFEDIGHSLDARRLMQSLPSLAPGTGSTRSSHARSSGSSIGGGAGG
GGGLCMLASTAQRFREGRALAKREARAVHFAAVEAGAAAAAAAALEVHQV
GAAGPAAAVLLAGAEEFVCEECGEAFEPTVLDGDGDAGKARRVRCFPHVN
GDLRVFYSPVRGEWGGFFSCCRKHVCFNLPTWGR*
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mRNA from alignment at P-littoralis_Contig202:168983..175463-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig202.40.2 ID=mRNA_P-littoralis_Contig202.40.2|Name=mRNA_P-littoralis_Contig202.40.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6481bp|location=Sequence derived from alignment at P-littoralis_Contig202:168983..175463- (Pylaiella littoralis U1_48)
AAGGCACACAAACCCGAACGCACTGACAGCGCTGGCCCCTTTGCCTCCTC
CGCCCTCGCGATCCACAACGGGTGTATGTGCGCCTAACCTACCGCCCTGT
GGTCGGAGGATATTCGCTCGAGACAGAAAGCTAGAGGCTGTTCACAAACG
ATTTCGAAGTTGCAGACGGGATTCGAAACAGAATTGGTGGCAAGGGCAGC
CAGCTGGCAGAAAGTAGGGCGGGAACTCAAACCAAACAATGGAGGTGATC
GAGTCGATTGGGGGACTGGTGAGCAGCATGCTAGACTTTCCGCTGGCCAA
TTTCCTGGGGCGCCTGCTTCCCGCGGGCGGGAGCGAAGCAGGGCAGCAAG
TGAGCCGTGCGTATGTGTATGTGTGCGTGTCGGTATTATCTCGAAGATAG
GAGATGGAGCCAATCCATCAAGAGAATGCGTGACCCTCGTCTCACTTTCA
CCATATCATACAGCACGGAGGGCCTCGATCTCATTTAAACTTCGTGTAAC
CCACGCACACGCAGCAGCAGTTACCTGCTGCATCGGATTATGAAAAGGGA
AACGGACTCGGGCGCATACTTGTAGTACTGTTTTGAAGCGCATACCATAT
GATATTTTTGATAATCTCGTTCATGACCTGGCAGACCTCGCACGCGGTGT
ACTATCCTATACATATGATATGATAACCCCAGTATCTTCGACGTGAAACA
GTCTGACAAAGAGATCGAGGGATCATTCCTCTTTTCTGGCTACGTCATCG
TCCTCCTGATCAAGCGAAATGAATCATCCCGGGTCAAATCGCCAAGACGG
AATGAGAGCCGAGCTGCCCTCCTACCCATTTTCTCATATGTAGGGCACAG
TGCTGTCGTACTGCTGTACCCGGAATAAAAGCGCCAAGAGTGTTCCCGGC
CGTGTCTGATTGGCCAGCTCTTATTTTTCACACTCACCTATCATCCTGCT
GTAGGCGGCTCTTAAAATGACCGCCGTACATACTTGGTTCGTCTCATATC
ATGTTGTACTCGGAGTATTATATCATACAGGTATTGTATCAATATTCTTC
GTACGAACTCCGGATGCAACACCGCTACTGCAGATGTATGTACAATATAT
GCCTCTTTTTGAAGTATCACCTGTTGCACAACAGCGGTTACGATTCGTAT
CATCGTAACACTACCGGAATGCAAGTTCAAACTCACCGTGGCCACGGCCC
AAAAAAGGACCAAGTCCGCCCCGTCTCTCTTCCTGCCCACTTTTCATCTG
GATTACTGCTGTACTACTGCTGCTTCATCGGTGTCGTAACATCTTGAAGC
ATCCTGCCTCACGCAATGTTGTTGAACAACACAAAAAAGTCACCATTCGC
ATCGTCCTTCAAGTAGATGTGTGGGTTTTGGCGTTTTGGCCGTGTTTACG
TTCCCCCCCCTGGGCCACCGCGACTAATCTGTAGTACTTGATGTCATCTA
ACGTTACATGTCATTTGATATGCTTCTCACGGTCCTCCCACCCCCCTCGC
CTGCCCCATGACGGGCCATCTGATCTGCAGCCGCCACATACGATACAGCC
GTATTTGCCATAGGTCCAAGTACAGCAGTCAAATTTCAGAGATCGAGGCA
GGTACATTGCGATTACTTCACGGACTGCACTTGCACTACTGTTGGCAGCA
GCTGCGACTGCTGGTTGTATCATACATTCCACATCATTCTTGCGTCGTAT
ACAGTAATACAATGGTTGTTGGCACGGTTTACGTTGTGTCGAGTATTCAA
GAATTCCCTCACGAACTCGACGCCTTTGGTCGATGCGACCATGCACACAC
AAGAGCGAGTCAAACGAACATACGAAGTACGTATACGGGAATACCTGATC
ACATTATTTGACAGGAGCCCACTCTGATGTGGTGGCAACCGTGTCCTCAA
AAGCCGTCACTTTTGTCTCGTACGCATCATATGTCATGGGAGGTTCCTGG
TTCCAACAAAAATCGTCCCAAAAACAACCGGCAACGTATGTGATACGACA
GTAACGGCGGTAGCAGGAGTCTTGAGTTCGTAATGCCGTCCGCGGGCTGC
GCGCGGCAAACGTTTCCTACTTCAAATTACGTTTTACTGATTTTTCACGC
GTTGATCAACTCGACCAGATACAGCAGTATTTGAAACGTCAACATTCATA
CGGGTGTAGCTCCACCCACCGATCAACGAGCAGGTCACCCCTTTACTACT
TGTGTCCCGCTGCCTAGGAACGCATCCAGTAATTTTTCGCTCAATAGTCC
CGATTTCCGAAAAAGAAAAGGATCCACACTCAACTAGTGCGGCATCCAAA
TGTTTTCGCTCAGAAGCCCTGGGCCCCAAAATCATGAAAGTCAAAGGATC
GCACACCATTTGCCTCCCCGAATGCCCTCGTCACGCATCCCGTCCCCACT
ACACTCCGGGTTTGCCAGCATGCACTCGTCCGTTTGTCTCCAAGAAACCC
TAGTAGTCAAAGAGCGTCGAGACACTCACCCAGTATCACTCCCGTGTACC
CTCACCCCCCTCACATACCCCCGTGTGCGCACGCTCCTCCTCTCCCGCCT
CGCCCCCGCCCTACACCAAAGGTCGCCACCGCTTTCGGCGCTGGCCTCCA
CAACTTGGGGTCTCTCTGCTCCCAGGCGGGGCTGGACCGGTGGGAGCTCC
TGGGACTGGCGGTGCTATCCGCGATCACGGTGTACCGCAAGGAACTGTCC
TCCAACAGCGTCTACAATGGCAAGGGGGTCGGTGACGGCGGCGGCCGTAA
TGGCGGCGGCGGCAGCGGCGGCGGCGGGCACTACCACCGAACCGACTGCG
GCGACAGCGCCGCCGTGGTGCACGTAGACGGCTGCCACATAGCGGTGGCT
GCTGCTGCGGCCGCTGCGGCGGCAGGAGCGGAGGCGCCAGCCGACGACAA
GGCCGGTACCGGTGCTGGGAAACCGTGTATGTGTGCACGAATCGCGGCGC
TGCAGAGGCAGCGGGCTTCGATAGCGAGGCGCTTGCGTGCGACCGAAGAC
GAGCGTAAGCTCAAGAGACTCGTGGCGGGACGGATTCGGTCGATGAACCT
CTCTGTGAATCACCTCCAGCAGCTCCGCGCGTCGGTGGACGCGTCGTGGT
CTTCGCTTGCGACAGCCTGGGATGCGAGGCGAGTGAGGGGCAACAGCAGC
AGCAGCAGAAGCAGTAGAAGCCAGGAGGCTGCGGGAGGTGAGCGGGAGAG
AGCAAAGACGGTGCCGTTGCCGCTGTCGAGGTTCGAGATGCCTCCCTGCC
CTCACCACTCGCACACAAGCTCTCGTCCTCACTCTATGGGTGGTGGGGTC
CAGCAGCAGCAGGAGCGCCGAGTACCAAACGCCGCAAGTTACAGTGTCGG
GAAGGAGAAGAATACGCTCCCAAAGGCGGAAGCGGGATGCGCAGAGTGCT
CTGCGATAGCGGCGGCGCACCTGACCGCGGCATCCCTCCTCCATGGAAGC
ATCCAGGACGGAAACGTTGCCACCGACGGCGGTGGCGGCACCGGCGGATT
CCTGCTGTCGGGAGAAGACGAAGTCTACGATCTCTGGGCGGGGTCGTCTC
TTGGCGTGCTCCCCGAGGATGCCTTACACAGAGTGGTGGCTTTCCTGCCA
CCTCAGGACTTGCTCGAGCTGGCGCAGGTGTCCAACGGAGCTCGGGAAGC
CGCGGACTCTCAGCTGGTTTGGAGGGAGGTGTGGTGGGCGAGGTTTGGGG
TGGTGTGGGAATCGGAGGTCTGCAAGAAGGCGGCACGGAGATGGCACCTG
CACAACTGGGACCCCAAGTCCTCGGCGGTGACCCAGGTGAGTTTTGACAG
AAATGGGGACGTTTTGTCGTACAAATAGAGGTTTTCATGGAACGGAGTCG
AGGAGAGAGAGCAAGTGAGACAGGCAGATCACTTTGTGCTTTCGCCGACC
CCCTCTCGAGGGGGATAATCGCGGGGTGTCTACTTTTCGATACCGCCCGC
TAATGGGTGGTGGGACTGTCATGACGAGTAGTGGAACGGTCATGAGTTGG
CGCAATTGCACCTTGCGGTAATAACTGGTAATAACGCGGGGTCGGGAGAG
ATATCATGTCATCCGATAGAGTTTATTTCCAACGGAAACCAGTCGTCGAG
AACCCACGATAGGTCGCCTCCGATACACCCTGTACGTACACATTGAAGAG
GAGACAGCAGTACCCACCACACAGGGCCGATCGCACTTGTGTGTTTGTGT
GTGTGTGTTGTGTGTGTGTTTTCCGACCCGCCAGTTATATTTTTCAGATA
ATGATATCTAGTTCAAGTAATAATGTTTTCACTTTCTTTCCCATTCGTGT
TGCACGCCCGTATCATACCCCACACACGCTTTGTTTTGTATTTTTTTCAG
GGCTGGAAGGAGTTCTTCTTCGAGTTCGAGGCGAGCTGGCTCGAGTGGAT
CGCTGCCGGGCAAAACCTTGAGTCGAGTTGCCTTGTGGGTGTGCACGGAC
GCCTGTTCGACATCACGGAGTTCATGCACCGCCACCCGGGATCGCCGGAA
ACCCTTATGGACAACGCCGGCGCAGATGCGTCCGAAATTTTCGAAGACAT
CGGCCACTCTCTGGACGCACGCCGCCTCATGCAGTCACTCCCGAGTCTGG
CGCCCGGGACTGGGTCGACGCGTTCGTCGCACGCTCGCAGTAGCGGCAGC
AGCATCGGTGGTGGTGCCGGCGGCGGCGGTGGACTATGCATGCTGGCCTC
CACCGCTCAGAGGTTCAGGGAAGGGCGAGCGCTGGCGAAGCGGGAAGCGC
GGGCTGTGCATTTCGCAGCGGTAGAGGCAGGGGCAGCGGCTGCGGCGGCA
GCGGCACTAGAGGTACACCAGGTCGGGGCGGCGGGGCCGGCGGCGGCGGT
GCTGCTGGCGGGGGCGGAAGAGTTCGTATGCGAGGAGTGCGGGGAGGCGT
TCGAGCCGACCGTTCTGGACGGGGACGGAGATGCTGGGAAGGCGAGGCGC
GTGAGGTGCTTCCCTCACGTGAACGGCGACCTGCGCGTGTTTTACTCGCC
CGTGCGGGGAGAGTGGGGCGGGTTCTTCTCTTGCTGCCGGAAGCACGTGT
GTTTTAATCTCCCTACCTGGGGACGTTGATCGATCGGTTGATTAGTTGAT
CGACGGGTCGATTGATTGGTTGATGGGTTGAATGGTTGATTGGTAGATCG
GTTAATAGATTGAATGAACGGTTGATTGTTGGTTGGCTGGTAATTTGTCT
CCCGTTTTTTTTTGTATGATTTATGGTCATTGGAAGTTTTTTCCAAGACA
ATGGTTCGAAGTGTGTACTGGTTTAGAGCATGTATCAGCGGCGTTTCAAG
TTCTGGGGGGTTGTATTTGGTCAATTTCACATAGATACAAACATAGAGGA
GCAGTTTTTCCAGCGTTTGGTTTCAGGTTTTGGTGTATCACAAGTGTGCG
ATGTGAAATGTTTTGGAATAAAAAAAAATATGGTCTTCGAAAAGTGAGAG
TTGTAGTCTCTTTTCTCTCCCTCCTTATTTTTTGTCTCTGCAAATTGTTG
CGATGTTGCTTCGACAGCAGTAGCTCTGGACTGAAGCGTTAGCGCATCTT
CAAAAGGATTGGCGGTCAAGCGAGCGCGCCAGCCCCGCTGCCGGAACTCA
GTGGGACGGGGCGGCTTTCTTCGCTTCCCCTCTTGTGTGCTCCTTCTCTG
TAGTACCTGTTTCGTGCTGTTCGTGTGATGCAAAACGCAGCAGCAACAGT
TGTATGGGGGAAATACGCCTAGAGGCACTAGGCACAGTGCATGAAAAGGC
TGTTGATATATACACGAAATTACTTGTTCGGGGCGACTCATGATGCCACC
CGCTGGTATCACGAGGTAGACAAGACGGGTATTTGCTCAGAGGGGGGGCG
GAGGTATTCAGCGTATGATAGCCCAACTGTATTTTCGACCGCTGAAAAAG
CAAGCTAGCAAGTGGGTGTGTTTTGTTTCTTCGTGTACCTCAAGCGGTAC
ACTCCTACCCGAAGATGTTTGTTGATATTACTTGTTGTGAGCGCAGGTAT
CGAGGCGGGCACAAGGGTATAGAGCTAGTGATTTTTGTAAAGCATTGCCG
TGGGGGACCCAGGGCGCGTTCCAAATCAACCACAAATTAATGTCAGATTG
AGAATCCGGTCACACACTTCGTGGGCAGAGCGGGGTGTCGTCAACTGACC
ACGTTGTGTTTCCGTTTTCGGACTTGCGGTTCATACCGGTACTACAGGAG
TATCGCATAGCGTAGCAGTACTTTTGTATTTCATACCTTTTTATGATTTG
GAATTTGTTGCAGCGATGACGCTAGGATTGTGATCGTCACGGAGCTACGC
GGGTAGAGCACCGAGACAAATAATAAGGGGCAAACGCCAAAGAGCGGTAT
ACCGCCATGGTTTCGCGCCACAAAGCGATACACCAAATTACACCTTTGCA
TTTGAGCCCCGTTCGCGTCGCTGATTGGCCAACTAAGCCTCGTATCGCTT
TCTGGCACCAGCAACCGGCGGTATATCACTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig202:168983..175463-

>mRNA_P-littoralis_Contig202.40.2 ID=mRNA_P-littoralis_Contig202.40.2|Name=mRNA_P-littoralis_Contig202.40.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2055bp|location=Sequence derived from alignment at P-littoralis_Contig202:168983..175463- (Pylaiella littoralis U1_48)
ATGGAGGTGATCGAGTCGATTGGGGGACTGGTGAGCAGCATGCTAGACTT
TCCGCTGGCCAATTTCCTGGGGCGCCTGCTTCCCGCGGGCGGGAGCGAAG
CAGGGCAGCAAGTCGCCACCGCTTTCGGCGCTGGCCTCCACAACTTGGGG
TCTCTCTGCTCCCAGGCGGGGCTGGACCGGTGGGAGCTCCTGGGACTGGC
GGTGCTATCCGCGATCACGGTGTACCGCAAGGAACTGTCCTCCAACAGCG
TCTACAATGGCAAGGGGGTCGGTGACGGCGGCGGCCGTAATGGCGGCGGC
GGCAGCGGCGGCGGCGGGCACTACCACCGAACCGACTGCGGCGACAGCGC
CGCCGTGGTGCACGTAGACGGCTGCCACATAGCGGTGGCTGCTGCTGCGG
CCGCTGCGGCGGCAGGAGCGGAGGCGCCAGCCGACGACAAGGCCGGTACC
GGTGCTGGGAAACCGTGTATGTGTGCACGAATCGCGGCGCTGCAGAGGCA
GCGGGCTTCGATAGCGAGGCGCTTGCGTGCGACCGAAGACGAGCGTAAGC
TCAAGAGACTCGTGGCGGGACGGATTCGGTCGATGAACCTCTCTGTGAAT
CACCTCCAGCAGCTCCGCGCGTCGGTGGACGCGTCGTGGTCTTCGCTTGC
GACAGCCTGGGATGCGAGGCGAGTGAGGGGCAACAGCAGCAGCAGCAGAA
GCAGTAGAAGCCAGGAGGCTGCGGGAGGTGAGCGGGAGAGAGCAAAGACG
GTGCCGTTGCCGCTGTCGAGGTTCGAGATGCCTCCCTGCCCTCACCACTC
GCACACAAGCTCTCGTCCTCACTCTATGGGTGGTGGGGTCCAGCAGCAGC
AGGAGCGCCGAGTACCAAACGCCGCAAGTTACAGTGTCGGGAAGGAGAAG
AATACGCTCCCAAAGGCGGAAGCGGGATGCGCAGAGTGCTCTGCGATAGC
GGCGGCGCACCTGACCGCGGCATCCCTCCTCCATGGAAGCATCCAGGACG
GAAACGTTGCCACCGACGGCGGTGGCGGCACCGGCGGATTCCTGCTGTCG
GGAGAAGACGAAGTCTACGATCTCTGGGCGGGGTCGTCTCTTGGCGTGCT
CCCCGAGGATGCCTTACACAGAGTGGTGGCTTTCCTGCCACCTCAGGACT
TGCTCGAGCTGGCGCAGGTGTCCAACGGAGCTCGGGAAGCCGCGGACTCT
CAGCTGGTTTGGAGGGAGGTGTGGTGGGCGAGGTTTGGGGTGGTGTGGGA
ATCGGAGGTCTGCAAGAAGGCGGCACGGAGATGGCACCTGCACAACTGGG
ACCCCAAGTCCTCGGCGGTGACCCAGGGCTGGAAGGAGTTCTTCTTCGAG
TTCGAGGCGAGCTGGCTCGAGTGGATCGCTGCCGGGCAAAACCTTGAGTC
GAGTTGCCTTGTGGGTGTGCACGGACGCCTGTTCGACATCACGGAGTTCA
TGCACCGCCACCCGGGATCGCCGGAAACCCTTATGGACAACGCCGGCGCA
GATGCGTCCGAAATTTTCGAAGACATCGGCCACTCTCTGGACGCACGCCG
CCTCATGCAGTCACTCCCGAGTCTGGCGCCCGGGACTGGGTCGACGCGTT
CGTCGCACGCTCGCAGTAGCGGCAGCAGCATCGGTGGTGGTGCCGGCGGC
GGCGGTGGACTATGCATGCTGGCCTCCACCGCTCAGAGGTTCAGGGAAGG
GCGAGCGCTGGCGAAGCGGGAAGCGCGGGCTGTGCATTTCGCAGCGGTAG
AGGCAGGGGCAGCGGCTGCGGCGGCAGCGGCACTAGAGGTACACCAGGTC
GGGGCGGCGGGGCCGGCGGCGGCGGTGCTGCTGGCGGGGGCGGAAGAGTT
CGTATGCGAGGAGTGCGGGGAGGCGTTCGAGCCGACCGTTCTGGACGGGG
ACGGAGATGCTGGGAAGGCGAGGCGCGTGAGGTGCTTCCCTCACGTGAAC
GGCGACCTGCGCGTGTTTTACTCGCCCGTGCGGGGAGAGTGGGGCGGGTT
CTTCTCTTGCTGCCGGAAGCACGTGTGTTTTAATCTCCCTACCTGGGGAC
GTTGA
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