|
|
Homology
BLAST of mRNA_P-littoralis_Contig201.99.1 vs. uniprot
Match: A0A6H5J519_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J519_9PHAE) HSP 1 Score: 670 bits (1729), Expect = 5.250e-227 Identity = 388/606 (64.03%), Postives = 432/606 (71.29%), Query Frame = 1
Query: 370 SADSADVAGGRAGSRPKVA------SSSKRDG-NARMMAPGQGPMDGVHQHLHPSRALWEGRATPSSPPA---PLRGTANMASXXXXXXXXXXXXXXXXXXXXXXXXXXXIATDTVWSSVLPESSPAPSIDSSSSLGHHWSWLQRXXXXXXXXR-VQSRRSVVVNQPIVAYGLEPPSRYDQQLAAVAAGGIDRPALRGQEYRRQKXXXXXXXXXXXX--AGKHPNKTNR--PTSSLMRSGSEFDGQSQQFGPEKDAAP-TRRFLGIPLP-FLPGARQGHADTAGSGDEPDSCGGGVQGSSGLRQGGDRGEFSVPE-DDRRLQVSLEGTQELGKGLGGHTVYRIQVTDSALGEQWMVLRRFRQFEELHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIAKRLKLLKVYLDRLVACSAAVEHRTMSSFLELDPALRGLGAYGRQHGPECVFKEGPLRVKVWKGSHKPVINLLEAGLRLIGWTSAYAIVSPGPVFLVYYGPEDDPENPVWVLPARRTIGSQVRVRRVDMWKADLDKEGIRLFLVIWENTSLLCQVDSEASLDSWAHALDESVDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL 2133
SADSADVAGGRAGSRP VA S+S RDG ++RM+ PG G ++ H HPSRALWEGRATPS P P + ++ ATDT WS VLPES AP +D SLG HWSWLQ+XXXXXXXX +QS + V+ QP AYG PS+Y QQLAA GIDRPALRGQEYRR+K A + N +N PTSSLMRSGSE D Q +RRFLGI P LPG R+ + T G D RQGG GE V +D RLQVSLEG QELGKGLGGHTVYR+QVTD A+GEQWMVLRRFRQFE LHRGLLPVLSREPDANAY LPPKEVFGGRHGGV+AKRLKLL+VYLDRLV CSAA+EHR +SSFLEL+PALRGLGAYGR HGPECV KEG L V+ WKG++KPVIN ++AGL L+GW SA+AIVSPGPVFLVYYGPEDDPE P+W LP +RTIGSQVRVRRVDM K D++K+G R FLV WE+TSLLCQVDSEASLDSWAHA+DE+VDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL
Sbjct: 34 SADSADVAGGRAGSRPPVAMASSVSSASTRDGFSSRMVVPGLGLVEDTSHHHHPSRALWEGRATPSPSPXXXXPSAALTSSSARISGSSRPLLVSGSSIEAGGGWVAGGGSATDTFWSPVLPESDTAPPMDR-GSLGEHWSWLQQXXXXXXXXEALQSEKGVITTQPAFAYGPVSPSQYKQQLAAA---GIDRPALRGQEYRREKRWRWGSASAAARSTAERISNNSNNSHPTSSLMRSGSELDRQXXXXXXXXXXXXXSRRFLGIRWPSMLPGGRRDRSATTGDDDFS------------TRQGGG-GELPVSGGEDARLQVSLEGAQELGKGLGGHTVYRLQVTDRAVGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVVAKRLKLLQVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWISAHAIVSPGPVFLVYYGPEDDPEKPLWALPDKRTIGSQVRVRRVDMRKTDVEKDGNRFFLVSWEDTSLLCQVDSEASLDSWAHAIDETVDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL 622
BLAST of mRNA_P-littoralis_Contig201.99.1 vs. uniprot
Match: D8LRJ3_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ3_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 2.070e-133 Identity = 226/335 (67.46%), Postives = 246/335 (73.43%), Query Frame = 1
Query: 1033 MRSGSEFDGQS-QQFGPEKDAAPTRRFLGIPLP-FLPGARQGHADTAGSGDEPDSCGGGVQGSSGL-------RQGGDRGEFSVP-EDDRRLQVSLEGTQELGKGLGGHTVYRIQVTDSALGEQWMVLRRFRQFEELHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIAKRLKLLKVYLDRLVACSAAVEHRTMSSFLELDPALRGLGAYGRQHGPECVFKEGPLRVKVWKGSHKPVINLLEAGLRLIGWT---------------------SAYAIVSPGPVFLVYYGPEDDPENPVWVLPARRTIGSQVRVRRVDMWKADLDKEGIRLFLV 1944
MRSGSE D Q QQ E +RRFLGI P LPG R+G + T + D P G G G+ RQGG GE V E+D RLQVSLEG QELGKGLGGHTVY IQVTD A+GEQWMVLRRFRQFE LHRGLLPVLSREPDANAY LPPKEVFGGRHGGVIAKRLKLLKVYLDRLV CSAA+EHR +SSFLEL+PALRGLGAYGR HGPECV KEG L V+ WKG++KPVIN ++AGL L+GWT SAYAIVSPGPVFLVYYGPEDDPE P+W LP +RTIGSQVRVRRVDM K D +K+G R FLV
Sbjct: 1 MRSGSELDRQQRQQSTTEYTTTTSRRFLGIRWPSLLPGVRRGRSATTDTHDMPSD---GYYGDGGVGDDHFSTRQGGGGGELPVSGEEDARLQVSLEGAQELGKGLGGHTVYSIQVTDRAIGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWTRRASAELVRLGLTSEAWLSRVSAYAIVSPGPVFLVYYGPEDDPEKPLWTLPDKRTIGSQVRVRRVDMRKTDFEKDGNRFFLV 332
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 9978.XP_004581585.1 |
| Preferred name | NISCH |
| PFAMs | LRR_4,LRR_8,PX |
| Model size | 3337 |
| Max annot lvl | 33208|Metazoa |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003008,GO:0003013,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006810,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0009987,GO:0010646,GO:0012505,GO:0015844,GO:0015850,GO:0015874,GO:0016020,GO:0016043,GO:0016601,GO:0019318,GO:0023051,GO:0023052,GO:0030029,GO:0030036,GO:0030334,GO:0030336,GO:0031410,GO:0031982,GO:0032228,GO:0032501,GO:0032879,GO:0032940,GO:0035556,GO:0040012,GO:0040013,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046903,GO:0048243,GO:0048519,GO:0048523,GO:0050432,GO:0050789,GO:0050794,GO:0050804,GO:0050839,GO:0050896,GO:0051179,GO:0051234,GO:0051270,GO:0051271,GO:0051716,GO:0051937,GO:0055037,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097708,GO:0099177,GO:2000145,GO:2000146 |
| Exons | 9 |
| Evalue | 3.46e-07 |
| EggNOG OGs | KOG1859@1|root,KOG1259@2759|Eukaryota,38VEQ@33154|Opisthokonta,3BG3G@33208|Metazoa,3CW3X@33213|Bilateria,48A8J@7711|Chordata,495NR@7742|Vertebrata,3J4M5@40674|Mammalia,35MHN@314146|Euarchontoglires |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-12_000010.1 |
| Description | norepinephrine secretion |
| Cds size | 1947 |
| COG category | TZ |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789989.7144117-UTR-P-littoralis_Contig201:358149..358338 | 1680789989.7144117-UTR-P-littoralis_Contig201:358149..358338 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig201 358150..358338 + |
| 1680789989.8214443-UTR-P-littoralis_Contig201:365988..367189 | 1680789989.8214443-UTR-P-littoralis_Contig201:365988..367189 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig201 365989..367189 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789989.7302132-CDS-P-littoralis_Contig201:358338..358552 | 1680789989.7302132-CDS-P-littoralis_Contig201:358338..358552 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 358339..358552 + |
| 1680789989.7425234-CDS-P-littoralis_Contig201:360440..361384 | 1680789989.7425234-CDS-P-littoralis_Contig201:360440..361384 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 360441..361384 + |
| 1680789989.7514184-CDS-P-littoralis_Contig201:361662..361797 | 1680789989.7514184-CDS-P-littoralis_Contig201:361662..361797 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 361663..361797 + |
| 1680789989.7617145-CDS-P-littoralis_Contig201:362135..362218 | 1680789989.7617145-CDS-P-littoralis_Contig201:362135..362218 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 362136..362218 + |
| 1680789989.7722163-CDS-P-littoralis_Contig201:362693..362799 | 1680789989.7722163-CDS-P-littoralis_Contig201:362693..362799 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 362694..362799 + |
| 1680789989.7841897-CDS-P-littoralis_Contig201:363286..363378 | 1680789989.7841897-CDS-P-littoralis_Contig201:363286..363378 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 363287..363378 + |
| 1680789989.793511-CDS-P-littoralis_Contig201:363945..364057 | 1680789989.793511-CDS-P-littoralis_Contig201:363945..364057 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 363946..364057 + |
| 1680789989.8023555-CDS-P-littoralis_Contig201:364748..364819 | 1680789989.8023555-CDS-P-littoralis_Contig201:364748..364819 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 364749..364819 + |
| 1680789989.8116808-CDS-P-littoralis_Contig201:365798..365988 | 1680789989.8116808-CDS-P-littoralis_Contig201:365798..365988 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig201 365799..365988 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig201.99.1 >prot_P-littoralis_Contig201.99.1 ID=prot_P-littoralis_Contig201.99.1|Name=mRNA_P-littoralis_Contig201.99.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=649bp
MENQEHLANLADGTRTRTTAAPAAVRVAAPAIGVGAARALLGLAPSPPAK DGDLSVSVASSADSADVAGGRAGSRPKVASSSKRDGNARMMAPGQGPMDG VHQHLHPSRALWEGRATPSSPPAPLRGTANMASSSSSSRRPFASGGGREG GGRLQAGGGGIATDTVWSSVLPESSPAPSIDSSSSLGHHWSWLQRQQQEQ QQQRVQSRRSVVVNQPIVAYGLEPPSRYDQQLAAVAAGGIDRPALRGQEY RRQKKRRDQQPVAAAAAGKHPNKTNRPTSSLMRSGSEFDGQSQQFGPEKD AAPTRRFLGIPLPFLPGARQGHADTAGSGDEPDSCGGGVQGSSGLRQGGD RGEFSVPEDDRRLQVSLEGTQELGKGLGGHTVYRIQVTDSALGEQWMVLR RFRQFEELHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIAKRLKLLKV YLDRLVACSAAVEHRTMSSFLELDPALRGLGAYGRQHGPECVFKEGPLRV KVWKGSHKPVINLLEAGLRLIGWTSAYAIVSPGPVFLVYYGPEDDPENPV WVLPARRTIGSQVRVRRVDMWKADLDKEGIRLFLVIWENTSLLCQVDSEA SLDSWAHALDESVDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL* back to topmRNA from alignment at P-littoralis_Contig201:358150..367189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig201.99.1 ID=mRNA_P-littoralis_Contig201.99.1|Name=mRNA_P-littoralis_Contig201.99.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9040bp|location=Sequence derived from alignment at P-littoralis_Contig201:358150..367189+ (Pylaiella littoralis U1_48) TAGCGAAGCTTCGCTATTCTATAGTCATGCCCCATAGTCGGACGATCAGC
AGCACAACAGGCGAAACAGCAGACGGAACTGCAGGCGAGACACCTCGTAG
GAGCTAACAGGGGGCCGTGAAGGCGGAAGGTCGTTCTACGGTCATATGCG
TTGGTCATCCTTGTCCTTCCAGTACGCAGGAAACGGCGAATGGAGAACCA
AGAGCACCTGGCGAACCTGGCGGATGGAACGAGAACGCGAACAACGGCAG
CACCAGCAGCAGTTAGAGTTGCAGCACCAGCAATAGGAGTAGGAGCTGCG
AGGGCGCTGCTGGGTCTTGCACCTTCCCCTCCTGCAAAAGACGGTGACCT
GAGTGTCTCTGTAGCGTCAAGCGCAGACAGCGCTGATGTTGCTGGTGGCC
GGGGTAAGTAGAGGTTATCAAGGACTTTCGATCGAGTAGTTGATGCAATC
ATGGCACGTATGATATGAGATATGTTGAAATCATATGAGAGCATTCGGGA
AAACGTACGCGAGAGGACGCGACGGCGGTTGCACCTTTTTATCTTGAGTT
TTTTGTTCTCCTGTGTACCAGGTGTCCATGTAACCCATCGCTGCACCGGT
ATGCTGTCTGTATTCGGACATTTGCCGTGGAAAACAGTACAGCAGTTCTT
GCACCATATTCGCTTGGCACTATTAAGTACTTGTACTGTGTGTGGCATTT
CGAATAATAGTATTATATACCTGGTACGATACCAAGTAGCGGCACCACCG
GCGGTAACGGCCATACTGCATGTACGTATCGGGCTCCACCCCGAGTTATG
ATAACTGCATATCATGAGCACTGCGAATCGGGGCTCTATCATACATTGCT
CTCTGAGCGAACCCCCCCGCCTGCTGCTGTGTCTACTGTTACAATTGTTT
TTTCACAAGATGGCGCTCGCGTAGCTTTCACACCCACACAACACAGGACG
GCGGTAGACGTTGAGAATGCGGGGGGTGGGACGTTGATGGCGCCGCCGCC
TCACTCGGCTCGGATCTGTCGTTGGATTTTGGCCCACCCCCATACGAAGT
ATTGGAGTACTTCGAAGTAGAATATACCAGTTATGACACAAGCAGTCGGC
TGGCATTTTATCCGCAAGGCGAAGATATCGTGATGATATCCTTCCTCGCA
GCCCACGCCGCGCAGCCAATGCGGCAGGTGGAAATCTAGTGGTGCCAGTT
GGCGAGCATACTTGGCGAAACACATCGGCATCATGGTAGCAGACAGTGAT
GTTTCGAATTTCTGGGGTTGCTTCTGTACAAGTAGCCGGCTCTTTCTGTC
GTGGGTAAGGTCCCAGGTTCAATTATTTTCTTCGAGGCGGGCGCCTGAAA
ACGGCAGACCGCCCATGGTTCCGCGCCACAAACCGATACAGCAGTACAGT
ACACCAGAATACACAGTGACACTTGAGAGCCTTTTCGCGACGCTGATGGC
CCATTGAGCACTGACTGTAACGCCCCGTGACACCAGTACGCGGCGGTGTA
GTGAGCCTTTTGGCGGCTCATCGGGTTGGATTATACCAATTTTGTGGCAT
GGGTTGTACATGTGCAGTACCGCGCTCTGGGGGGGTCAGAGCGCCTCCAC
AGTGACATTTCGACCTCGACATTTCGCCGGGCGTTCACACCCCCACACAG
TTTTCACTCCTTACCCATCTCAGCCACGTCATATCACGGACATACAAGTT
CAGATCTCCTCGGCTTGTTGTGACATATCGGCAAATACAGGTAGACGCCT
TCGCTCTTTGTCCATCGACGTGACTCTCTGCACTGGATTGATTGCAGATC
ATGTTACAGACACTTCTATAGCTGCGATATGATAAGTCCGCACAAAGCTG
GTACTTGGTGTTACAGTACCTGGGTGTGGTCTACAACCGTTACAACCGTA
CGAAATCAGAGTACGGAGTACAACACCGGTACATTCTCGGTTTGAGCGAT
TTTGGCTCAGAATTGAGGGAAGAGCGTCTATCCGTGCACCAAGTTGTTTC
TGAATGCTGACATTTCGGGCGCTGTGGGGCCGGTGAACGTGGGGTGTGCT
ACTGGTGAGTGAATACGGACGTGTACAGCAGTATACTTGTGCGATACGTC
GAATATAATGCGGGAAATGCGCGAGCGCCCTTTCGCATGAGGTGGCATCA
ACTAGCTTCGCTTATCGCCGAAACTGACCGCAGTGGTGTACAGCCGTTCG
TCGCTTTTTTCTCCTCCCTTGGGCTGTTTTTGACCTCCTCTTTCTGAATG
ATGTCGGCCGTCTCACGATGATCGATCGACACACCATGCAGCCGGTTCAC
GACCAAAAGTGGCCTCCTCATCAAAAAGGGACGGAAATGCGAGGATGATG
GCACCAGGACAAGGACCAATGGATGGTGTTCACCAGCATCTCCATCCATC
CCGGGCTCTGTGGGAGGGTCGGGCAACCCCATCCTCGCCCCCTGCCCCTC
TGCGTGGCACCGCCAACATGGCTTCTAGTAGTAGTAGCAGCAGGCGCCCG
TTTGCAAGCGGGGGCGGCAGAGAAGGAGGGGGCAGGTTGCAGGCCGGCGG
TGGCGGCATAGCGACGGACACGGTCTGGTCCTCCGTTTTACCGGAGAGTA
GCCCCGCCCCATCCATCGACAGCAGCAGCAGCTTGGGCCACCACTGGAGT
TGGTTGCAGCGGCAACAGCAGGAACAGCAGCAGCAGCGTGTACAATCTCG
GCGCTCAGTAGTCGTCAATCAGCCAATCGTCGCCTACGGATTGGAACCCC
CCTCCAGGTATGACCAGCAGCTCGCGGCGGTGGCGGCAGGGGGAATAGAC
CGACCGGCGCTGAGAGGGCAAGAGTATCGACGACAAAAAAAACGGAGAGA
CCAGCAACCAGTGGCGGCGGCAGCAGCAGGGAAGCATCCAAACAAAACCA
ACCGGCCGACATCCTCTCTCATGAGGAGTGGCTCCGAATTCGACGGACAG
TCGCAGCAGTTCGGCCCAGAGAAAGATGCCGCTCCCACGAGGCGTTTCTT
GGGTATCCCGTTGCCCTTTCTGCCGGGAGCCAGGCAAGGCCATGCGGACA
CGGCGGGCTCCGGGGACGAGCCAGACAGCTGCGGTGGCGGGGTTCAGGGT
TCTAGCGGGCTTCGGCAAGGTGGAGATCGCGGAGAATTTTCGGTGCCCGA
AGATGATCGCCGGTTACAGGTGTCGCTCGAGGGAACCCAAGAGCTCGGCA
AGGGACTCGGAGGTCACACAGTCTACAGAATACAGGTGTGGCTCGAGTAG
TAAAGTACCATGCACGTCCTCGCTCAGCAGAGTGCCCCAGGACGAGGTGT
GAAACCTGGGGATGGGGTGTTATTAGAGCTACCGCAGTCGCGTGTCGTTG
GTGTGTGTCGACAGCAGTGTCGCGGTGTCGACGTACCGCCTCATGTGATC
GGGAAAATGCTTGATTTTTCAAATGCATGATAGACTGATTTTTTGTATTT
TATTACAGACACGCAACGCGTGTATCGCATGGCGTGCGCTGTCATGCTTC
CGCTATGAGGCAGGTGACTGATAGCGCGCTGGGAGAGCAGTGGATGGTGC
TGCGTAGATTTCGCCAGTTCGAAGAGTTGCACCGAGGGCTGCTGCCAGTG
CTTTCCAGGGAGCCGGACGCGAACGCCTACGCCTTGCCTCCGAAAGAGGT
GCGGCGTGAAACCAAAGTCTTTCCGTTAAAGAGTGTCTCCCTGATCGTGT
TGATGGTGAGTATGTAGCGTAGGTTGGGGCTGATGATGCGGTTGATGTTC
GCTTGTAATGGGAGTAGTAGTGGTAGCAGTGGGGCTGCTCACGGGAAGTA
CATCAAAGTTTTTTTTTTACGTACAGCGAGTAGAGAGAGTTGCCTCGGTG
GCGAGAGATTGTTGTGCCTGTATTAGGATAAGCAGTGCATCTGTCACGGC
TGAACCGCCATCCGACGCCCTCACTTGAACCTTGTGAACTCGGGCGGTGG
CGGTGGTGGCGGCGGTGGCGGTAACGATGACAACAGGTGTTCGGGGGAAG
GCATGGAGGGGTGATCGCGAAGCGATTGAAGCTGCTCAAGGTCTACCTGG
ACCGTCTCGTCGCGTGCAGGTATGTATGTTCCGATGGCCACAAGTACGAC
ACCTGCGATCGCTCACTTTGCACGATGCTTTTTGTGTGTCTCGTCAATGG
CCCCACCCCTGCTGGTCCTACCTCTGCCGTTGCTGCGTTGCACGGCCTCG
TCACACACTTTCCCGTGATCGAGCAATATTGTACCCAACGCGGATGTACT
AGGCACTGCTGTACCTGTCTTCAGGACCTTGGGAGGGTTGACTTATTCAC
CTCTTCCCCCGTGAAGCATACCTTGCTGCTAGTGCCCTATTGTAGGCGGC
GTGTTGCATCACGTGTACAATAGTGTGGCACTCGGGAGTGTGTCCGTCTA
AGGGCCCACTGATGCTTGATACTGCCTGCAGCTCATGCACCCTGTGGTTG
TGTGTTTTTCTTGACAATGGCCGAAACTCATACTACTGTATATACTGTAC
GGCTCCGATTGGTCCACCACCGTTTTCGTCCAACACCCACGCAGTGCTGC
CGTGGAACACCGCACCATGTCGTCTTTCTTGGAGCTTGATCCGGCGTTGA
GAGGTCTCGGTGCGTACGGCCGACAGCATGGCCCGGAGTGCGTTTTTAAG
GTATTGCGGTAAAAGTTAGGCGCTAGACGGAGTTGTTCAAGTACTCACCT
ATGATACAAGTATTGTACTACCATTGTCAGACCGGCTGGCACGAATAGCC
AAGGACTGGCAACGACTTCGAACAGTTTTTACTTTTCGTCTCTACTGTGC
TTGTCTAGTACGCTGCTGATGGTGCAGTTTGGGGGACGTCCATCGGAAGG
CGCTGCTTGTGTCTCTTCCATTGGTTGTTTAAACGCTGTTCTTGCGTGTC
GCGCTTGATCTTGGAGCATGGTATCATGGTAGCTGCCGGCTCTCTGATAT
TCGTATAGCCTAGCCTGGGCCGAATTTTCATTATTTCCTTTCCGTCCTTA
TCGCCTCTTTTGTATATGCACGTCGCACATTCCCCTGGTTGGTTCTGCAG
CCGTCTCCCCGATCGATTTATTAATTCTGACCGCGTACGACGTTTTCTCA
CCCGCTTTGCTTTTTCACCCGCTTCGCTGGGCTGCAGGAGGGGCCGTTGA
GGGTGAAGGTGTGGAAGGGATCGCACAAGCCGGTCATCAATCTCCTGGAG
GCAGGGTTACGGCTCATTGGATGGACAAGGTGCGATGGAACACGAAATAC
TTGCGTCTTTTTCGGCCTGGTTGGTTTGATCGGAATGGCTGTGAATATGG
GCGACAACCTTTAGCGGTACATCCAAGGTGGGAGAAAAGGTCAGAACAGC
AGCCGGACATTGTCGTACATCGGCCACGGCTTCTTACGAGGAATATGATA
ACCCCCAGAAATTCCCCTATGCTGCGGCTGCTGCCTGATATTAGATTTGG
TTGATTGTGGTTGGACGGCCTGGCCTGTCTACCGCATAGTGGTGTGACAT
TTTTTTTTCCCTCCCGCTCCTCTGTCATGTCGCCTGAACACGGTTCCCGT
TGCCTGTTTCACGGCCCACCAATGACAGCGGCGAAAAGCCTGGCCATTGT
TCGTTATGTATCAGCTTCTCCCGTTCGCTAGCTTCAATGGAGAGACCTAA
CTTTGTTCATAACCCATCAGGAAAATGACCCCGCGGACTTCTTAATAGCC
CTGTCCTTCTCCTCCAACCTGTCCCGACTGGATGTGCACCCCCTCCTCTC
TCCACCACGCCTCTGTCTACTGCTGCATCGCGTCACGTGTTTGAAGTGCC
TATGCGATAGTCTCGCCAGGGCCGGTGTTTTTGGTTTACTACGGTCCGGA
AGACGACCCCGAAAATCCCGTGTGGGTCTTGCCTGCCAGAAGGACTATCG
GCTCGCAGGTGAGATGATAAATAACATGATAAATTACATGATAGACATAC
GATACGATACGCACCTTGTGAACCATTCACTGGCGGAGAGCAACGAGAGC
GACGCAGAATAGAAGGAGGAAGGGAGGGAGGGAGGGAGGGGCTGTGTTGG
GGTCACGCACTGGAAAAGGCGGGGATTAGTCGTGGCGGTGGGGGATAGTT
ATGGTCGCTCTTGTCGTGGCCGGCGTTGTCGCAGCGGCCCAGAAGCTCGC
CAGCAACGGCATGTCCGTGGCACGCTGAACTACCACACTGCTGTAAGATA
CGGCTGTTTCCACTGTTTCACAATGAGTCGACGGAGCTACTGCTTCACTA
TCAACTCAAATACCTCGCACATCAGTCCATGCTCTTGTAGATGCATGCTC
GGTGTCCTGCAGGCAACATCATCGTGTACGATTATGGTCGGGTCGGCACC
GACGAGGTCTGGCGAAATCTTCATGAACACGGGAAAAAGCTTATTCAACA
CCATGTTAACTTCAAAAAGCTGCGCCCATTGACAGAATTCGCCGGAATCG
AATCGTATACCAGGTGTTGATTACGTCGCGCCGCCGCGTGCCATCCTTTC
ACTAGCCGTTTTTCTGCGATCTGCATATTGCTGCTGCTGCTGCTGCCCTG
AAATGTACTCTTCATCTCGCCCCCACCCTCTGCTTTGGTTTGGAATCAGG
TCCGGGTGCGGCGTGTGGACATGTGGAAAGCGGACCTGGACAAGGAAGGG
ATTCGTCTTTTTCTTGTCATGTGAGGGTCACTTGCATGAAACAAACGGAA
CACAAACATAATTGAAGGCGAGCAGATGGAAATTGGTGCGTCACGTCCCC
TACTATAGTTTTGACTCAAAATTTACGTAACGTCCAGCTTGGAATCCTCC
TGTTAAGCCTATTCCTCGCTGAAATCATCAGTCGCAGCTTTTGCCGACCA
AGCAGGAATCGCAGTCCGTGTGATAAAAGGTAGGCGACAGGTAGGAGACG
AGAGGAGAGGTAGTCGGGTCGAGGGGACTTCCGAAGCACGAGCAAGCGTG
CAGATCGAGGGAGCATGATGAGGAAGTGTGCGTTGTAGTTACAGCACCTT
AGGTTGGTTTGCTTTGCTTTAGGCAGCGGTTTTATATTTATTCAACTACT
ATTGCTGACCACAATCATCAATCCGGGCTATCATACATGCCATGTTCGCT
GTTGTTCTTTCCAGCTTGTTCTGAACGGGCCAGAGCTTTTGCGTTCGTTG
ACCGCTCCCTGCATATCATAGACGAGTGTCGACGTGGTCCCCGTATGGTC
TTCCTCCCGTGCACACATGTCATAACCCCCCTGGCCTCTCTCTGCTTGTC
TTTTTGGACGTTTCTTGGCACATTGTCGTATCGTACCGATGTGTTCATCG
AGAGATGCGGGAGAGGCTTAGTCCGCCGAAAGCTTGACGTGCGCGGTCAA
GCATCTAATGACGACGAGGAAAAACAACTTGCAAAAACGACCCCCCCCCC
GCTTGCCCCGGGTTGACTTTGACGCAATGGCTGCGAGGTCAAGTTCAAAT
GACTCGCACGACGTTACAAAGTACTTCGAAGTAGAATATGTCTGTTTCGG
CCAGTGAACGCCGAGTGTGCTTCTCCCAAACTTCGTTGGCATGCATGACT
CCCTCTGATTACCTTACGGTTGTGGGTGACAGTTACAACGCCTCCTTACT
TCCCCGCCTTTTCTCGTCGCTTCCTGGGTATATGCATCGTGTATCATAGC
TGGGAGAACACCTCGCTCCTGTGCCAGGTTGATTCTGAGGCGTCCCTAGA
CAGCTGGGCACACGCTCTGGATGAAAGCGTCGACCTCAGGCCGCAGCAGT
CGGAGGAGGACAGAGCTAAGGTAGACATTGAGCTCAAGGCTAAGGAGGCG
TGGACCACGAGGGAAGAGGGGTTGTGGGGGGGGCTTTGACTGAAGTCGAT
AGCTCGATAGTGAAACAACAAGTTGACTTCTTGGAGCTGGTTCATCGCAC
GGGGGCTTAGGGCGATGAGAGACTATATTGCGGGGATGTTCCGGGGGAGG
CTCGGGACATGGTTTGGGGTTTGTGCTATTGGGAAACGTTTTGGAGGAAT
ACGCCCCCTCAACGAAGGACTCGTGTGATGTTTGTATAGTTTTGGCTGTT
TTTCGTCGTTTTTCCTCGCACGATTATTTTCCCGATCTTTGTCTACCATG
TGTGTTTGCACTGCCTCTCGAATATACTCATACTTCGAAGTATGTCTTTG
GTGCCCTGCTGTCCATAATTAAATGTACACACAAATATATCAGGCACCAG
TACATACTGTCGCGCATGATCTGTCCCGGTTCTCGATCCTTGGTGCCATT
CTCGGGTTAAATCCTTTCTGTATTCTGGTGCGTGCGCTAAAGTGTTCCAT
CGTCCATTTCGTTCTGCGCAGATGCGTTCAAAGTGTATTGGCGGGCGTGT
AGCTTGAACAGTCGTGAAGAATGTATAACGTATGCTATGATGCGTGTGGC
TCGTCAAGAGGGTGTGTTGGTGCCTCGAGTAGGCGCCTGTAGATAGAGGC
GGCAACCTGGTGTGACAAGTGGACTCGCGTAGAGCAATAGAGAGGAGAAT
TGGGGAAACTCATGCCGAGGGGACCTGGCGCGTACATGATGGTGGGGTCC
GACGGTGTGCCAACCGCTGTGCTGTACAGGCTGGATTGAGCAAGAGACTA
ACTTTCGTTCGACACGCCATAACTTTTCAAGGAAATGGAATCGGGAGGAG
TTCGGCATATCCTTTTGCTCGCCCAATCACAGCGGATTTGCACGTCACGC
AAAAAAAGCCCTGGGGACAGGTTGTCTCAAACGAAGAATATCTCCCGCTA
TTTGTATAGGTTTCAGAGGGGGCTGGAGAAAACCGAAACGTCATTTTTTT
TGCGGCGAAATTTTTTTCAAAAAAATCAAACACCACAGCACACCAAAGAC
AGCAGACAGCATGGCACCGCCGAGAGTCTCTCTCCTTGTCGTGCCTTTAT
TTGCTATTGTTGGTATTGTGTTGTTGCTTTCTTGTGTAGGTAAGGGTGGT
TGTTTCTGTACAAGTACCTGTACTGCTGTATTGTACCGCTTTGTGAAACG
GGGGCTGTCTCCTTGTACGTACAATACTCCGGAATGTCGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig201:358150..367189+ >mRNA_P-littoralis_Contig201.99.1 ID=mRNA_P-littoralis_Contig201.99.1|Name=mRNA_P-littoralis_Contig201.99.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1947bp|location=Sequence derived from alignment at P-littoralis_Contig201:358150..367189+ (Pylaiella littoralis U1_48) ATGGAGAACCAAGAGCACCTGGCGAACCTGGCGGATGGAACGAGAACGCG AACAACGGCAGCACCAGCAGCAGTTAGAGTTGCAGCACCAGCAATAGGAG TAGGAGCTGCGAGGGCGCTGCTGGGTCTTGCACCTTCCCCTCCTGCAAAA GACGGTGACCTGAGTGTCTCTGTAGCGTCAAGCGCAGACAGCGCTGATGT TGCTGGTGGCCGGGCCGGTTCACGACCAAAAGTGGCCTCCTCATCAAAAA GGGACGGAAATGCGAGGATGATGGCACCAGGACAAGGACCAATGGATGGT GTTCACCAGCATCTCCATCCATCCCGGGCTCTGTGGGAGGGTCGGGCAAC CCCATCCTCGCCCCCTGCCCCTCTGCGTGGCACCGCCAACATGGCTTCTA GTAGTAGTAGCAGCAGGCGCCCGTTTGCAAGCGGGGGCGGCAGAGAAGGA GGGGGCAGGTTGCAGGCCGGCGGTGGCGGCATAGCGACGGACACGGTCTG GTCCTCCGTTTTACCGGAGAGTAGCCCCGCCCCATCCATCGACAGCAGCA GCAGCTTGGGCCACCACTGGAGTTGGTTGCAGCGGCAACAGCAGGAACAG CAGCAGCAGCGTGTACAATCTCGGCGCTCAGTAGTCGTCAATCAGCCAAT CGTCGCCTACGGATTGGAACCCCCCTCCAGGTATGACCAGCAGCTCGCGG CGGTGGCGGCAGGGGGAATAGACCGACCGGCGCTGAGAGGGCAAGAGTAT CGACGACAAAAAAAACGGAGAGACCAGCAACCAGTGGCGGCGGCAGCAGC AGGGAAGCATCCAAACAAAACCAACCGGCCGACATCCTCTCTCATGAGGA GTGGCTCCGAATTCGACGGACAGTCGCAGCAGTTCGGCCCAGAGAAAGAT GCCGCTCCCACGAGGCGTTTCTTGGGTATCCCGTTGCCCTTTCTGCCGGG AGCCAGGCAAGGCCATGCGGACACGGCGGGCTCCGGGGACGAGCCAGACA GCTGCGGTGGCGGGGTTCAGGGTTCTAGCGGGCTTCGGCAAGGTGGAGAT CGCGGAGAATTTTCGGTGCCCGAAGATGATCGCCGGTTACAGGTGTCGCT CGAGGGAACCCAAGAGCTCGGCAAGGGACTCGGAGGTCACACAGTCTACA GAATACAGGTGACTGATAGCGCGCTGGGAGAGCAGTGGATGGTGCTGCGT AGATTTCGCCAGTTCGAAGAGTTGCACCGAGGGCTGCTGCCAGTGCTTTC CAGGGAGCCGGACGCGAACGCCTACGCCTTGCCTCCGAAAGAGGTGTTCG GGGGAAGGCATGGAGGGGTGATCGCGAAGCGATTGAAGCTGCTCAAGGTC TACCTGGACCGTCTCGTCGCGTGCAGTGCTGCCGTGGAACACCGCACCAT GTCGTCTTTCTTGGAGCTTGATCCGGCGTTGAGAGGTCTCGGTGCGTACG GCCGACAGCATGGCCCGGAGTGCGTTTTTAAGGAGGGGCCGTTGAGGGTG AAGGTGTGGAAGGGATCGCACAAGCCGGTCATCAATCTCCTGGAGGCAGG GTTACGGCTCATTGGATGGACAAGTGCCTATGCGATAGTCTCGCCAGGGC CGGTGTTTTTGGTTTACTACGGTCCGGAAGACGACCCCGAAAATCCCGTG TGGGTCTTGCCTGCCAGAAGGACTATCGGCTCGCAGGTCCGGGTGCGGCG TGTGGACATGTGGAAAGCGGACCTGGACAAGGAAGGGATTCGTCTTTTTC TTGTCATCTGGGAGAACACCTCGCTCCTGTGCCAGGTTGATTCTGAGGCG TCCCTAGACAGCTGGGCACACGCTCTGGATGAAAGCGTCGACCTCAGGCC GCAGCAGTCGGAGGAGGACAGAGCTAAGGTAGACATTGAGCTCAAGGCTA AGGAGGCGTGGACCACGAGGGAAGAGGGGTTGTGGGGGGGGCTTTGA back to top
|