mRNA_P-littoralis_Contig201.9.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 8.270e-154 Identity = 236/302 (78.15%), Postives = 263/302 (87.09%), Query Frame = 1
Query: 289 MKTAADNVVGVKSKLLQLAAVMDRGGMANPG---VSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKG----ATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
++ A+D+V VKSK+LQLAA MDRGGMANPG VS+AYLGTKDDMRLLVESLA+LDPVN P+T ++LSGRWELVYTTVELFRASPFFQMVEAGYDDP+KSNLFFKLHQLQTGSWGAS IGR+TQTLDLIDS PS +G AT EA EAAAA EG + V ++T ++ SGSLESEVDLIILPLTS+PLVGFWKLLPTFGGCIATKAKC+L GDNNEVV+L+VESTKLKAVEDVPLLP+AG LFEGMEFPTG+V KKVMGNVPVTKQTVV++DD+LRVMEDKAGELYIYAR
Sbjct: 7 VRMASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEA-EAAAAGAVEGSDKAGVVEDNT---DMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC) HSP 1 Score: 184 bits (466), Expect = 4.340e-51 Identity = 112/302 (37.09%), Postives = 163/302 (53.97%), Query Frame = 1
Query: 271 GLAETRMKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQ-LFEGMEFPTGDVAKKVMGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
GLAE + AD +K +LLQLAA DRG A K+ + +V+ L+ P + +P L+G W LVY + +LFR+SPFF ++A YDD K++LFFKLH+LQT SWG S I ++ QTL E G L S+ ++ +LP T +PLVG+WKLLPTFGG + + A +++GD N+ ++L V+ TK+KA ED+PL+PL GQ L E +V K++ G+VP + T VF+D +R+ +D GE+++Y R
Sbjct: 51 GLAEV---STAD----LKMRLLQLAASTDRGQQATKR-------QKEQISNVVDDLSSRGPFDC--SPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQTL-----------------------------------------LFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S1UDK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK1_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.140e-42 Identity = 106/297 (35.69%), Postives = 158/297 (53.20%), Query Frame = 1
Query: 310 VVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLS---GRWELVYTTVE--LFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALT--GDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNVPVTKQTV--VFMDDSLRVMEDKAGELYIYAR 1173
++ +K+++ Q+AA MDRG + ++AY MR +E+L + +P P+ LS G WEL+YT+V+ +FR+SPFF +E YD+ + SNLFFKLH+LQT SWG S++GR+ Q D E K+ + SE D + LT++P+VGF+KLLPTFGGC+ T++K T G + V E+ V+ T+ K V +P LP+ G +E P GD+ +K+ N K V V++DD R+ DK GEL++Y R
Sbjct: 64 IMRLKARISQIAASMDRGTVRYK-YADAYTEKAAAMRQELEAL--IAHPGAPAVPTDLSALDGEWELIYTSVKHGIFRSSPFFLAIEEAYDNEELSNLFFKLHELQTCSWGVSTVGRVAQVWD--------------------------SEAKM--------------------MYSEFDTSLFGLTTIPIVGFFKLLPTFGGCVRTESKVTSTEIGPDGRV-EMEVDLTRAKEVPGLPPLPILGDRVYDIEVPVGDIWEKLPWNKGPAKCAVNIVYLDDDFRIAADKYGELFVYTR 310
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A8J2X3D5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3D5_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.300e-42 Identity = 104/302 (34.44%), Postives = 150/302 (49.67%), Query Frame = 1
Query: 292 KTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGN---VPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
KT D++ +K+ + A +DRG NP Y D VE+L E V ++P +L GRWELV+++V +FR+SPFF+ + Y + PDK+ LFFKLH+LQT SWGAS IGR+ QT+D P + L SE D I LT++P++GFWKLLPTFGGC+ T +K + N+ + L VE T K VE + L G+ ++ P G V K + N P V++DD +R+ +D +G+ ++YAR
Sbjct: 43 KTFGDDISKLKAAIFHYGATLDRGQGFNPTTGEQYKDRMDRAVAAVEALCEKGGVPD-VSPEKLRGRWELVFSSVPHGIFRSSPFFEAIYDSYANVGKPDKAELFFKLHELQTMSWGASKIGRVAQTID----------------------------------------------PENNMLYSEFDTQIFSLTAIPIIGFWKLLPTFGGCVVTASKMNI---NDNALNLEVEYTTAKPVEGLSGL---GEWIWDVKVPVGAVWKLLPWNRGLPPTCAVEQVYLDDDVRIAKDTSGQYFVYAR 291
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.190e-42 Identity = 101/299 (33.78%), Postives = 151/299 (50.50%), Query Frame = 1
Query: 292 KTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNA--YLGTKDDMRLLVESL-AELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEV----VELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKV----MGNVPVTKQTVVFMDDSLRVMEDKAGE 1155
+T+ +V +K K+ QLAA+ DRG + +P VS+ Y ++ M L+E L A+ ++P L G WELVY+T +LFR+SPFFQ +E Y DP KS LFFKLH+LQT SWGAS IGR+ QT+DL + +L S D ++ PLT++PL+G++KLLPTFGG + + A ++ + +E V T K + + +PL G E +FPT + + G+ P VV++D+ R++ + GE
Sbjct: 7 ETSGSSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQ----------------------------------------------AQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S2SW68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW68_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.130e-41 Identity = 106/314 (33.76%), Postives = 157/314 (50.00%), Query Frame = 1
Query: 274 LAETRMKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAEL-DPVNSPITPSQLSGRWELVYTTVE--LFRASPFFQMVEAGYD--------DPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKV---MGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
++E+R+ +D +K+++L L AV+DRG NP Y R VE+L L DP P + ++G WELV+TTV +FR+SPFF V+ ++ DK+NLFFKLH+LQT SWGAS IGR+ Q +KP G L SE D I LT +P++G+WKLLPTFGGC+ T +K + G++ +E+ V+ T K V P L G+ ++ P G V K + G + ++ ++DD R+++DK GEL++Y+R
Sbjct: 56 VSESRLLGGSDERTCLKAEILHLGAVLDRGQSFNPTSGPQYGDRMAAARRKVEALIGLQDPETLPKDLAGIAGEWELVFTTVPHGIFRSSPFFLAVQEAFEYGETTEAFGEDKANLFFKLHELQTCSWGASKIGRVAQV----------------------------------------------IKPDEGYLYSEFDTSIFSLTVIPILGWWKLLPTFGGCVITASKAKMNGND---IEMEVDYTTSKPV---PGLSGLGKWIWSVKVPVGAVWKLLPWNKGRAATCRVSLKYLDDDFRIVQDKDGELFVYSR 317
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A2BX06_PROM5 (Possible Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus (strain MIT 9515) TaxID=167542 RepID=A2BX06_PROM5) HSP 1 Score: 154 bits (390), Expect = 4.650e-41 Identity = 97/287 (33.80%), Postives = 150/287 (52.26%), Query Frame = 1
Query: 319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNV--PVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
VK K+ Q+AA+ DRG N +S Y ++M L++ L + +N I+ +LSG WEL+Y+TVELFR+SPFF +E +D KSNLFFKLHQLQ GS+G S+IGRI Q +D N + S D II L+++P++G++KLLPTFGG + T A DN+ +++ ++ TK+ VE + +P+ L +P V K+ N P + +++++D+ +R+M+D G ++IY R
Sbjct: 7 VKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKIL---ECLNFEISEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDF------------------------------------NKKEFI----------STFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNS--LQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIYVR 242
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO) HSP 1 Score: 156 bits (395), Expect = 5.220e-41 Identity = 95/301 (31.56%), Postives = 152/301 (50.50%), Query Frame = 1
Query: 289 MKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVP---LLPLAGQLFEGMEFPTGDVAKKVM---GNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
+++ ++ +K ++LQ +A +DRG + + VS+AY G + + L++ L S S ++G WELVY+T +LFR+SPFF ++A + D +KS LFFKLH LQ SWGAS++GR+ Q +D S SE D II LT +P+ G++KLLPTFGG + + A+ +++ ++ T+++A +P LP+ G+ +FP V K + G P TV ++DD+ R+MED GEL++Y+R
Sbjct: 58 IRSDRQDIQNIKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELCSRK-TESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDFE----------------------------------------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S4HG07_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HG07_9EUKA) HSP 1 Score: 155 bits (392), Expect = 1.170e-40 Identity = 105/302 (34.77%), Postives = 152/302 (50.33%), Query Frame = 1
Query: 319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPS--QLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVP-LLPLAGQL-------FEGMEFPTGDVAKKVMGNV--PVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
+K ++LQLAA +DRG NP S+AY M ++ E L EL + P+ S +L G WELV+T V+ +FR+SPFF ++ Y P+K+ LFF+LH+LQT SWGAS IGR+ QT+D + G L SE D +L LT++P++GFWKLLPTFGGC+ T + AL GD + + V+ T + V+ + L P G++ +E P G V K + N P + + D R++ D +GEL++YAR
Sbjct: 52 LKLEVLQLAAALDRGQSYNPTSSDAY---SQRMAIVTEKLEELIAQSPPLPTSLEELDGEWELVFTNVKHGIFRSSPFFLAIQEAYASAGVPEKAELFFRLHELQTCSWGASKIGRVAQTIDASE----------------------------------------------GMLYSEFDTNLLSLTAIPVLGFWKLLPTFGGCVVTASSAALEGDR---INMEVKYTTSRKVDGLSGLRPWFGEIGLKIADAIWKLEVPVGAVWKLLPWNKGPPTCSVELKYFDGDFRIVADGSGELFVYAR 301
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A0M0JAH9_9EUKA (Pili assembly chaperone n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAH9_9EUKA) HSP 1 Score: 154 bits (390), Expect = 1.280e-40 Identity = 101/300 (33.67%), Postives = 148/300 (49.33%), Query Frame = 1
Query: 319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPS--QLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLP-----LAGQLFEGMEFPTGDVAKKV---MGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
+K K+L AA +DRG NP S+AY ++ M + + EL + P+ + L G WELV+T V +FR+SPFF ++ Y + PDK+ LFFKLH+LQT SWG S IGR+ QT+D +G L SE D +L LT +P++G++KLLPTFGGC+ T + AL GD ++ L S + + + LP QL ++ P G V K + G P +V+ D +R++ED++GEL++YAR
Sbjct: 21 LKMKILISAAALDRGQSYNPTSSDAY---RERMEITTSLMRELIAASPPLPTNLAALDGEWELVFTNVAHGIFRSSPFFLAIQEAYANAGAPDKAELFFKLHELQTCSWGVSKIGRVAQTIDAA----------------------------------------------TGRLYSEFDTNLLSLTVIPILGWFKLLPTFGGCVITASSAALNGDKIDMEVLYTTSRPVPGLSGLRPLPGDLGKQIAQLIWSLKVPVGFVWKLLPWNQGRAPTCSVKLVYFDGDIRIVEDRSGELFLYAR 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig201.9.4 >prot_P-littoralis_Contig201.9.4 ID=prot_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=392bp TRSRHAALAATLRTAGNLRRFSPLSHSVMTPAAMIAVPAIALLWLAGFAEback to top mRNA from alignment at P-littoralis_Contig201:73211..77561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig201.9.4 ID=mRNA_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=4351bp|location=Sequence derived from alignment at P-littoralis_Contig201:73211..77561- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig201:73211..77561- >mRNA_P-littoralis_Contig201.9.4 ID=mRNA_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1176bp|location=Sequence derived from alignment at P-littoralis_Contig201:73211..77561- (Pylaiella littoralis U1_48)back to top |