mRNA_P-littoralis_Contig201.9.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig201.9.4
Unique NamemRNA_P-littoralis_Contig201.9.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 8.270e-154
Identity = 236/302 (78.15%), Postives = 263/302 (87.09%), Query Frame = 1
Query:  289 MKTAADNVVGVKSKLLQLAAVMDRGGMANPG---VSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKG----ATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            ++ A+D+V  VKSK+LQLAA MDRGGMANPG   VS+AYLGTKDDMRLLVESLA+LDPVN P+T ++LSGRWELVYTTVELFRASPFFQMVEAGYDDP+KSNLFFKLHQLQTGSWGAS IGR+TQTLDLIDS  PS +G    AT   EA EAAAA   EG  +  V  ++T   ++   SGSLESEVDLIILPLTS+PLVGFWKLLPTFGGCIATKAKC+L GDNNEVV+L+VESTKLKAVEDVPLLP+AG LFEGMEFPTG+V KKVMGNVPVTKQTVV++DD+LRVMEDKAGELYIYAR
Sbjct:    7 VRMASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEA-EAAAAGAVEGSDKAGVVEDNT---DMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC)

HSP 1 Score: 184 bits (466), Expect = 4.340e-51
Identity = 112/302 (37.09%), Postives = 163/302 (53.97%), Query Frame = 1
Query:  271 GLAETRMKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQ-LFEGMEFPTGDVAKKVMGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            GLAE    + AD    +K +LLQLAA  DRG  A           K+ +  +V+ L+   P +   +P  L+G W LVY + +LFR+SPFF  ++A YDD  K++LFFKLH+LQT SWG S I ++ QTL                                            E     G L S+ ++ +LP T +PLVG+WKLLPTFGG + + A  +++GD N+ ++L V+ TK+KA ED+PL+PL GQ L E       +V K++ G+VP  + T VF+D  +R+ +D  GE+++Y R
Sbjct:   51 GLAEV---STAD----LKMRLLQLAASTDRGQQATKR-------QKEQISNVVDDLSSRGPFDC--SPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQTL-----------------------------------------LFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S1UDK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK1_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.140e-42
Identity = 106/297 (35.69%), Postives = 158/297 (53.20%), Query Frame = 1
Query:  310 VVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLS---GRWELVYTTVE--LFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALT--GDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNVPVTKQTV--VFMDDSLRVMEDKAGELYIYAR 1173
            ++ +K+++ Q+AA MDRG +     ++AY      MR  +E+L  +    +P  P+ LS   G WEL+YT+V+  +FR+SPFF  +E  YD+ + SNLFFKLH+LQT SWG S++GR+ Q  D                           E K+                    + SE D  +  LT++P+VGF+KLLPTFGGC+ T++K   T  G +  V E+ V+ T+ K V  +P LP+ G     +E P GD+ +K+  N    K  V  V++DD  R+  DK GEL++Y R
Sbjct:   64 IMRLKARISQIAASMDRGTVRYK-YADAYTEKAAAMRQELEAL--IAHPGAPAVPTDLSALDGEWELIYTSVKHGIFRSSPFFLAIEEAYDNEELSNLFFKLHELQTCSWGVSTVGRVAQVWD--------------------------SEAKM--------------------MYSEFDTSLFGLTTIPIVGFFKLLPTFGGCVRTESKVTSTEIGPDGRV-EMEVDLTRAKEVPGLPPLPILGDRVYDIEVPVGDIWEKLPWNKGPAKCAVNIVYLDDDFRIAADKYGELFVYTR 310          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A8J2X3D5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3D5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.300e-42
Identity = 104/302 (34.44%), Postives = 150/302 (49.67%), Query Frame = 1
Query:  292 KTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGN---VPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            KT  D++  +K+ +    A +DRG   NP     Y    D     VE+L E   V   ++P +L GRWELV+++V   +FR+SPFF+ +   Y +   PDK+ LFFKLH+LQT SWGAS IGR+ QT+D                                              P +  L SE D  I  LT++P++GFWKLLPTFGGC+ T +K  +   N+  + L VE T  K VE +  L   G+    ++ P G V K +  N    P      V++DD +R+ +D +G+ ++YAR
Sbjct:   43 KTFGDDISKLKAAIFHYGATLDRGQGFNPTTGEQYKDRMDRAVAAVEALCEKGGVPD-VSPEKLRGRWELVFSSVPHGIFRSSPFFEAIYDSYANVGKPDKAELFFKLHELQTMSWGASKIGRVAQTID----------------------------------------------PENNMLYSEFDTQIFSLTAIPIIGFWKLLPTFGGCVVTASKMNI---NDNALNLEVEYTTAKPVEGLSGL---GEWIWDVKVPVGAVWKLLPWNRGLPPTCAVEQVYLDDDVRIAKDTSGQYFVYAR 291          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 7.190e-42
Identity = 101/299 (33.78%), Postives = 151/299 (50.50%), Query Frame = 1
Query:  292 KTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNA--YLGTKDDMRLLVESL-AELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEV----VELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKV----MGNVPVTKQTVVFMDDSLRVMEDKAGE 1155
            +T+  +V  +K K+ QLAA+ DRG + +P VS+   Y   ++ M  L+E L A+       ++P  L G WELVY+T +LFR+SPFFQ +E  Y DP KS LFFKLH+LQT SWGAS IGR+ QT+DL                                               + +L S  D ++ PLT++PL+G++KLLPTFGG + + A      ++ +     +E  V  T  K +  +  +PL G   E  +FPT +    +     G+ P     VV++D+  R++ +  GE
Sbjct:    7 ETSGSSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQ----------------------------------------------AQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S2SW68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW68_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.130e-41
Identity = 106/314 (33.76%), Postives = 157/314 (50.00%), Query Frame = 1
Query:  274 LAETRMKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAEL-DPVNSPITPSQLSGRWELVYTTVE--LFRASPFFQMVEAGYD--------DPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKV---MGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            ++E+R+   +D    +K+++L L AV+DRG   NP     Y       R  VE+L  L DP   P   + ++G WELV+TTV   +FR+SPFF  V+  ++          DK+NLFFKLH+LQT SWGAS IGR+ Q                                               +KP  G L SE D  I  LT +P++G+WKLLPTFGGC+ T +K  + G++   +E+ V+ T  K V   P L   G+    ++ P G V K +    G     + ++ ++DD  R+++DK GEL++Y+R
Sbjct:   56 VSESRLLGGSDERTCLKAEILHLGAVLDRGQSFNPTSGPQYGDRMAAARRKVEALIGLQDPETLPKDLAGIAGEWELVFTTVPHGIFRSSPFFLAVQEAFEYGETTEAFGEDKANLFFKLHELQTCSWGASKIGRVAQV----------------------------------------------IKPDEGYLYSEFDTSIFSLTVIPILGWWKLLPTFGGCVITASKAKMNGND---IEMEVDYTTSKPV---PGLSGLGKWIWSVKVPVGAVWKLLPWNKGRAATCRVSLKYLDDDFRIVQDKDGELFVYSR 317          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A2BX06_PROM5 (Possible Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus (strain MIT 9515) TaxID=167542 RepID=A2BX06_PROM5)

HSP 1 Score: 154 bits (390), Expect = 4.650e-41
Identity = 97/287 (33.80%), Postives = 150/287 (52.26%), Query Frame = 1
Query:  319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFPTGDVAKKVMGNV--PVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            VK K+ Q+AA+ DRG   N  +S  Y    ++M  L++ L   + +N  I+  +LSG WEL+Y+TVELFR+SPFF  +E   +D  KSNLFFKLHQLQ GS+G S+IGRI Q +D                                     N    +          S  D II  L+++P++G++KLLPTFGG + T A      DN+  +++ ++ TK+  VE +  +P+   L     +P   V  K+  N   P  + +++++D+ +R+M+D  G ++IY R
Sbjct:    7 VKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKIL---ECLNFEISEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDF------------------------------------NKKEFI----------STFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNS--LQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIYVR 242          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO)

HSP 1 Score: 156 bits (395), Expect = 5.220e-41
Identity = 95/301 (31.56%), Postives = 152/301 (50.50%), Query Frame = 1
Query:  289 MKTAADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVP---LLPLAGQLFEGMEFPTGDVAKKVM---GNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            +++   ++  +K ++LQ +A +DRG + +  VS+AY G +  +  L++ L       S    S ++G WELVY+T +LFR+SPFF  ++A + D +KS LFFKLH LQ  SWGAS++GR+ Q +D                                                S    SE D II  LT +P+ G++KLLPTFGG + + A+          +++ ++ T+++A   +P    LP+ G+     +FP   V K +    G  P    TV ++DD+ R+MED  GEL++Y+R
Sbjct:   58 IRSDRQDIQNIKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELCSRK-TESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDFE----------------------------------------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A7S4HG07_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HG07_9EUKA)

HSP 1 Score: 155 bits (392), Expect = 1.170e-40
Identity = 105/302 (34.77%), Postives = 152/302 (50.33%), Query Frame = 1
Query:  319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPS--QLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVP-LLPLAGQL-------FEGMEFPTGDVAKKVMGNV--PVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            +K ++LQLAA +DRG   NP  S+AY      M ++ E L EL   + P+  S  +L G WELV+T V+  +FR+SPFF  ++  Y     P+K+ LFF+LH+LQT SWGAS IGR+ QT+D  +                                              G L SE D  +L LT++P++GFWKLLPTFGGC+ T +  AL GD    + + V+ T  + V+ +  L P  G++          +E P G V K +  N   P     + + D   R++ D +GEL++YAR
Sbjct:   52 LKLEVLQLAAALDRGQSYNPTSSDAY---SQRMAIVTEKLEELIAQSPPLPTSLEELDGEWELVFTNVKHGIFRSSPFFLAIQEAYASAGVPEKAELFFRLHELQTCSWGASKIGRVAQTIDASE----------------------------------------------GMLYSEFDTNLLSLTAIPVLGFWKLLPTFGGCVVTASSAALEGDR---INMEVKYTTSRKVDGLSGLRPWFGEIGLKIADAIWKLEVPVGAVWKLLPWNKGPPTCSVELKYFDGDFRIVADGSGELFVYAR 301          
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Match: A0A0M0JAH9_9EUKA (Pili assembly chaperone n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAH9_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 1.280e-40
Identity = 101/300 (33.67%), Postives = 148/300 (49.33%), Query Frame = 1
Query:  319 VKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELDPVNSPITPS--QLSGRWELVYTTVE--LFRASPFFQMVEAGYDD---PDKSNLFFKLHQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEGKVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFGGCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLP-----LAGQLFEGMEFPTGDVAKKV---MGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR 1173
            +K K+L  AA +DRG   NP  S+AY   ++ M +    + EL   + P+  +   L G WELV+T V   +FR+SPFF  ++  Y +   PDK+ LFFKLH+LQT SWG S IGR+ QT+D                                                +G L SE D  +L LT +P++G++KLLPTFGGC+ T +  AL GD  ++  L   S  +  +  +  LP        QL   ++ P G V K +    G  P     +V+ D  +R++ED++GEL++YAR
Sbjct:   21 LKMKILISAAALDRGQSYNPTSSDAY---RERMEITTSLMRELIAASPPLPTNLAALDGEWELVFTNVAHGIFRSSPFFLAIQEAYANAGAPDKAELFFKLHELQTCSWGVSKIGRVAQTIDAA----------------------------------------------TGRLYSEFDTNLLSLTVIPILGWFKLLPTFGGCVITASSAALNGDKIDMEVLYTTSRPVPGLSGLRPLPGDLGKQIAQLIWSLKVPVGFVWKLLPWNQGRAPTCSVKLVYFDGDIRIVEDRSGELFLYAR 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.9.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIK9_9PHAE8.270e-15478.15PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A0G4EA07_VITBC4.340e-5137.09PAP_fibrillin domain-containing protein n=1 Tax=Vi... [more]
A0A7S1UDK1_9STRA1.140e-4235.69Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2X3D5_9STRA1.300e-4234.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9CZF7_9STRA7.190e-4233.78PAP_fibrillin domain-containing protein n=2 Tax=Na... [more]
A0A7S2SW68_9STRA1.130e-4133.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A2BX06_PROM54.650e-4133.80Possible Gram-negative pili assembly chaperone n=1... [more]
A0A061RCL2_9CHLO5.220e-4131.56Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL... [more]
A0A7S4HG07_9EUKA1.170e-4034.77Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A0M0JAH9_9EUKA1.280e-4033.67Pili assembly chaperone n=1 Tax=Chrysochromulina t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig201contigP-littoralis_Contig201:73211..77561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LRM1
Model size1176
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons7
Evalue4.11e-160
EggNOG OGs2A2EM@1|root,2RXHW@2759|Eukaryota
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-12_000330.1
Cds size1176
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig201.9.4prot_P-littoralis_Contig201.9.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig201 73211..77561 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789986.3133159-CDS-P-littoralis_Contig201:73210..733151680789986.3133159-CDS-P-littoralis_Contig201:73210..73315Pylaiella littoralis U1_48CDSP-littoralis_Contig201 73211..73315 -
1680789986.3393955-CDS-P-littoralis_Contig201:73687..737981680789986.3393955-CDS-P-littoralis_Contig201:73687..73798Pylaiella littoralis U1_48CDSP-littoralis_Contig201 73688..73798 -
1680789986.352691-CDS-P-littoralis_Contig201:74291..744231680789986.352691-CDS-P-littoralis_Contig201:74291..74423Pylaiella littoralis U1_48CDSP-littoralis_Contig201 74292..74423 -
1680789986.3619654-CDS-P-littoralis_Contig201:75219..753931680789986.3619654-CDS-P-littoralis_Contig201:75219..75393Pylaiella littoralis U1_48CDSP-littoralis_Contig201 75220..75393 -
1680789986.3744748-CDS-P-littoralis_Contig201:76075..761801680789986.3744748-CDS-P-littoralis_Contig201:76075..76180Pylaiella littoralis U1_48CDSP-littoralis_Contig201 76076..76180 -
1680789986.38811-CDS-P-littoralis_Contig201:76387..765571680789986.38811-CDS-P-littoralis_Contig201:76387..76557Pylaiella littoralis U1_48CDSP-littoralis_Contig201 76388..76557 -
1680789986.3991475-CDS-P-littoralis_Contig201:77182..775611680789986.3991475-CDS-P-littoralis_Contig201:77182..77561Pylaiella littoralis U1_48CDSP-littoralis_Contig201 77183..77561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig201.9.4

>prot_P-littoralis_Contig201.9.4 ID=prot_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=392bp
TRSRHAALAATLRTAGNLRRFSPLSHSVMTPAAMIAVPAIALLWLAGFAE
DAAGFVVSTSPSHAVATEAGRLHQRQLQPQQHRCCRQQARGLAETRMKTA
ADNVVGVKSKLLQLAAVMDRGGMANPGVSNAYLGTKDDMRLLVESLAELD
PVNSPITPSQLSGRWELVYTTVELFRASPFFQMVEAGYDDPDKSNLFFKL
HQLQTGSWGASSIGRITQTLDLIDSASPSTKGATKEVEAAEAAAAKGEEG
KVQGNVTSNSTALVEVKPISGSLESEVDLIILPLTSLPLVGFWKLLPTFG
GCIATKAKCALTGDNNEVVELVVESTKLKAVEDVPLLPLAGQLFEGMEFP
TGDVAKKVMGNVPVTKQTVVFMDDSLRVMEDKAGELYIYAR*
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mRNA from alignment at P-littoralis_Contig201:73211..77561-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig201.9.4 ID=mRNA_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=4351bp|location=Sequence derived from alignment at P-littoralis_Contig201:73211..77561- (Pylaiella littoralis U1_48)
ACCAGGTCGCGCCACGCTGCCCTAGCTGCCACCCTACGTACTGCAGGTAA CCTTCGTAGGTTCTCTCCCCTGTCCCACTCAGTGATGACGCCAGCTGCCA TGATCGCCGTGCCCGCTATAGCGCTGCTGTGGCTGGCTGGCTTCGCTGAG GATGCGGCTGGCTTCGTCGTTTCCACATCACCGTCACATGCTGTTGCCAC CGAGGCCGGCAGATTGCATCAGCGTCAACTTCAGCCTCAGCAGCACCGCT GTTGCAGACAGCAAGCGAGGGGGTTGGCCGAGACGAGGATGAAGACGGCC GCGGACAATGTGGTTGGAGTCAAGTCTAAGTTGTTGCAGCTCGCGGCGGT CATGGATAGAGGTGGCATGGCAAACCCAGGCAAGCGGTGTTGTTGACTCT TGGCGAGATCTTTTTTGGGTGACCTCTGACTGGACGTTCAAGCGGGCTAA CTCAACGCACATATTGTCTGTCTGGTGCTCATGACTCGCTCATGATGGTG TACTAGCTCCGTCGCCGAGGTCCTACCTGAAAGATCTCCCTTACCTCCGT GCAAACAACTGGAGGTGTCTCCAACGAAGCCTTGTGGGTTCCATCACGTA TTGCTGTGACCCTTTAGCTGTTGCATGTAAACCGTCTTCGAACACACTGT GAACCTGCTTTTCATTTTCACTGCGCCTGCTACAGCTACTTACTTGAACA TACGGAGTGATGTCCATTCCTTCCTGGCGCCGCATGCCTGCTTCCTCCTA CCACTGCTGTACCATCAATAGTGACCCAAATTCGGTCTCACAGCTGCAGC GGTCGCCTCGCCAATGCCTCTCCGAAAAGTAATCGTTCATCTTCAACACC CTCTCTATTGTTTGTACACAACGATTAGTTGATCACGCCACGGGAGGTTT ACAAGCAGTATCACAGAGTCCCAACAGCTCTCATCAATACCTCACTTCTT CCCGCGCTGTTACTTCTCTCTTCTCAAATGTCTGCACCGCATTCTGTGAT TCAGGAGTATCGAACGCATATTTGGGAACCAAGGACGACATGCGACTATT GGTGGAGTCGCTGGCGGAGCTAGATCCCGTGAACTCGCCGATCACCCCGT CCCAGCTGAGCGGGCGGTGGGAGCTGGTTTACACCACGGTCGAGCTCTTC CGCGCATCCCCTTTCTTTCAGATGGCAAGGAAGAGAGAGAGGGGGGGTGG GGGGGAGGTTGGGGGGTACTCCTGAAGCGACAGAGAAAATTCTGAGAGGA ATGTGAAACTTAGGGGCATGCGAGAACGAGGCTGTCGAATGTCGCTCATG CAGTAGCTCGTAAGCTTTCACCGCAAATGCACCTGACCTCTGAGATGTTT TCTATTTATGCATTCGAAACTCGAACCTCAGGTAGAGGCCGGCTACGATG ACCCGGACAAGTCCAACCTGTTCTTTAAGCTGCACCAGCTGCAGACGGGC TCGTGGGGCGCCAGCTCTATCGGCCGGATCACACAGGTGAGGACCGACAG GAAAGCAGCCCATGCAGGGAGGACCGGACGTTTCAGTGCAGCACGCTTTG GCATTAGACCCCTACGCATTTCATGTGCCCACAAACTCTGATAGATTAAG GGGTTCAGGAGGAGCTTTGATTCGAGGTTCGACAAGAGGTTTGCAGGGTG GATGTTACGCGTGGTTTTTTTATTGTATTTTGTGTGGGCGGGGAAGAATC GTTTGTGGCCCCGTGAGGCTCTCACGTCTCGTTTGATCAATATGAGGGCC ACAATCGGCCCACCTCGGCCGAGTTCTCTCTACCCTACACTACAGTACAC GCCACTGCTTCGCATTTGGCACCACGGTACGATGCAGACCTTGTTTGTTT GTCTGCCCCCTCCGTCTAGTCCGACAAGCTGCATCTAGTGTCGCAAACTA TCCGTTGCAACTAATGATGTTGGCAGGTTTAAGCAAAAGAGTGTTGCTGT GATCTGATGGAACCCGTATAAAACTCACCTGCCACTCATTCATCGCAAAT TCAAGCTTTCACTCGATGCTTTGTTTGTTGCATCTGCGGTATGAAGCGGC GTTTTGTCACCCGGCTGCAGGTCCGTCATTCACGCCCTTGTTTCAATGTT TTTCTTTTTTGCCATTTTTTGGGGTCGGACGCCTGGGTACTGCCACACTG CTGCACTGCTTCCTGCAGACATTGGACCTCATCGACTCGGCCTCGCCTAG CACAAAGGGAGCCACCAAGGAGGTTGAAGCAGCTGAAGCAGCAGCAGCCA AGGGCGAAGAGGGGAAGGTACAAGGGAACGTGACATCGAACAGCACAGCG TTGGTGGAGGTGAAGCCCATCAGTGGTTCCTTGGAGTCGGAGGTGAGCCG ATGCAGTATCGCAGCAGCGAATGCTTTTTCGTCTCGAAAGTGCTACTCGT ATTAGCGACTGAGTTCATCGTTGTTTATTGCGTGCAATTGGTCGCCGTAT CCATTTGCTACCGGGGGCGGTCCATGACCTGTGTGTATGCTTGCGTCGTC GCATGAACTCATCCACGAAAAAAAACGTCATTTTTTTCCCAACAAGGTGC CCACGCTTTCGTATCGCTTCTGCAAACGCTTCCTGGTTTGAGGTGTAAAC GAGCTGCCTGCCTTATTTGTAGAACCCGCTGATCGTCGTAAGTTCAGTGA CGGGTTCCGATTGTGTGCATAACGTCGAGCCACGACGTCGAGCCGCGAGG TCAATCGTGTGGCGTAAGCCCGTCGGCCTCGAGATGGACTTAAGGGACAC GGCGTACACCTACACGCGCGCGCGTGTATGCCATCGACCGTACCCGTGCA TGCACCCGCAGCGCGTTGGTTTCTACAGTGGTGATCGGTCAGTCTGTCTG AAACCAAAACTGCAGGCATCCGTCATGGCTGCTGTCATTTAGGAGAACTG CTCTCTCACATCGGGGGCGAGGCATCCTTTGTTACCAAAGCCGGTCGAAC CCCTCCGCTTATTTTTGTGTGCCCGTCGAAGTGAAAAGCACCTCCCGGTT TATCATACTCTCAAACTTCACAGCAGCACATGTGGCAGACACAACACCTT CGTCCTGCAACCTTGTCCGTCGCACCTCACGATTCAGACGAGGCGAACAC TCTCCCCCCCCACTCCTACCCGTGCGTGATGACTACAGGTTGATTTGATT ATTCTTCCCCTGACGTCGCTGCCGCTGGTGGGCTTCTGGAAACTCCTTCC TACGTTTGGGGGTTGCATCGCGACCAAGGCCAAATGCGCGCTTACTGGCG ACAACAACGAAGTCGTAGAGGTTAGTGTCAGTGCAGTGCCATTCATTTAA TGGCATGTTGTGAGCGTACGTGATCTAGGTTTTTATTTTCGGCGTCCCGT TCGTTGTCGAGCAACATTGAGTTAGGTACCTATCGTGGTGCATGTTGCGT GGCCGGCTTGTGCTGAACGTCGGCGTGTGCAGTAGGCCCCATCGACAATA TGCATTTTTCTGCTTCTTACGAGGTATTATCGACGTGGTAAATTGCGCCA TGGTGCCCACAGTGTATCGATAGACGCGTCTCCTTTTGACTCTTTTTCAG GGATGATTTTCGATGACGACCGTGCTTGGTGGTCCATGCCTACAGTCTAG CGCGCGTTTCAAAATGTCCCCTATTTCTGGTGGGTTGTAAGAATTTGCGG GGCAGGGCAGTGAACCCCCGGATGACACACGGCGTACCATAGGCTGTCCC GCAATATTTTCTCACCGCCTTGGTTATCTCCCTCCCATCTGATGTTTGTA CGCACGAAAACAGTTGGTCGTGGAATCGACAAAGCTGAAAGCAGTCGAGG ATGTGCCACTGCTCCCGCTCGCGGGCCAGCTTTTCGAAGGAATGGAGTTT CCCACAGGAGATGTGGCCAAGAAGGTGAGAACACGTTAGTCAGTCGCCTG TGCAATACGGCACTTTATCCTGTTCAACACTCGCAGTAGCCTGATTCGCC CTGCCAGAAGCATCGGAGAGGATTGGATGAGGTGAAATGTATCCATTGCA ATCGAGGAATGGCGCAACTTCTTGTAGGACAGATGCCGCACACCCTCTTC TAGCCGCCACCGCCGTTACTGCCGCTACCACCGCAACACCTAAAGGAATG TTCTTTTGTCCCTCCATTCATTTATTTTGCTGCTCTTGTCGTTGTTGATG ATGTAACTATTTGCTGTTGTTGTTGTTGTTTCGTTGAAAGTTAAGTAATT GCTTACGCATATCTTAGTCCTGCTGATATGGTACTTTTTTTGTCAGGTTA TGGGGAATGTGCCGGTCACGAAGCAAACGGTTGTGTTCATGGACGACAGC TTGCGGGTGATGGAAGACAAAGCTGGAGAGCTTTACATTTACGCTAGGTG A
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Coding sequence (CDS) from alignment at P-littoralis_Contig201:73211..77561-

>mRNA_P-littoralis_Contig201.9.4 ID=mRNA_P-littoralis_Contig201.9.4|Name=mRNA_P-littoralis_Contig201.9.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1176bp|location=Sequence derived from alignment at P-littoralis_Contig201:73211..77561- (Pylaiella littoralis U1_48)
ACCAGGTCGCGCCACGCTGCCCTAGCTGCCACCCTACGTACTGCAGGTAA
CCTTCGTAGGTTCTCTCCCCTGTCCCACTCAGTGATGACGCCAGCTGCCA
TGATCGCCGTGCCCGCTATAGCGCTGCTGTGGCTGGCTGGCTTCGCTGAG
GATGCGGCTGGCTTCGTCGTTTCCACATCACCGTCACATGCTGTTGCCAC
CGAGGCCGGCAGATTGCATCAGCGTCAACTTCAGCCTCAGCAGCACCGCT
GTTGCAGACAGCAAGCGAGGGGGTTGGCCGAGACGAGGATGAAGACGGCC
GCGGACAATGTGGTTGGAGTCAAGTCTAAGTTGTTGCAGCTCGCGGCGGT
CATGGATAGAGGTGGCATGGCAAACCCAGGAGTATCGAACGCATATTTGG
GAACCAAGGACGACATGCGACTATTGGTGGAGTCGCTGGCGGAGCTAGAT
CCCGTGAACTCGCCGATCACCCCGTCCCAGCTGAGCGGGCGGTGGGAGCT
GGTTTACACCACGGTCGAGCTCTTCCGCGCATCCCCTTTCTTTCAGATGG
TAGAGGCCGGCTACGATGACCCGGACAAGTCCAACCTGTTCTTTAAGCTG
CACCAGCTGCAGACGGGCTCGTGGGGCGCCAGCTCTATCGGCCGGATCAC
ACAGACATTGGACCTCATCGACTCGGCCTCGCCTAGCACAAAGGGAGCCA
CCAAGGAGGTTGAAGCAGCTGAAGCAGCAGCAGCCAAGGGCGAAGAGGGG
AAGGTACAAGGGAACGTGACATCGAACAGCACAGCGTTGGTGGAGGTGAA
GCCCATCAGTGGTTCCTTGGAGTCGGAGGTTGATTTGATTATTCTTCCCC
TGACGTCGCTGCCGCTGGTGGGCTTCTGGAAACTCCTTCCTACGTTTGGG
GGTTGCATCGCGACCAAGGCCAAATGCGCGCTTACTGGCGACAACAACGA
AGTCGTAGAGTTGGTCGTGGAATCGACAAAGCTGAAAGCAGTCGAGGATG
TGCCACTGCTCCCGCTCGCGGGCCAGCTTTTCGAAGGAATGGAGTTTCCC
ACAGGAGATGTGGCCAAGAAGGTTATGGGGAATGTGCCGGTCACGAAGCA
AACGGTTGTGTTCATGGACGACAGCTTGCGGGTGATGGAAGACAAAGCTG
GAGAGCTTTACATTTACGCTAGGTGA
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