mRNA_P-littoralis_Contig201.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig201.8.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI) HSP 1 Score: 882 bits (2279), Expect = 8.530e-303 Identity = 569/838 (67.90%), Postives = 669/838 (79.83%), Query Frame = 1
Query: 1 MQGIRAPPSEPAEGCDRSPLSDGDVVKNLLRGQAVQNDVQEALASLASALSSVSDNDGIIRSVKRRFDEREEACANLAKATEEIKAEKESRAQLNQAQSDRETSLRDEIGRLERAVHTAEDACTNTQREAKSAQSTADKEITRLRVIASSAEEDAAEWQRKANAGESRLKSMTAEVGALHEAMAGLHGEMGAVQRELDIAKSSQDKMATDLARADGRHRKSQEECSATLARAKDAEKGLRKETGERERLSAEFTRLIQASQQGEAETLALTTEIKRLKESEGAHSSNIDKLNATNRELNALLQRLSADLEDAKSTGESYSKRADASALEVGLRDEEGRRVKEALAAAQSRLEAAEREKGFLKEALGKATAEAQAKTTEVDRQRGELDLLEREKHDLILDVQERVRAQKEATADAERCQARAEEVGKRLKDEESAKLAADISKNKTLDELSNARRGTAMQDERIEVLRSELATLRRTLEQTTEAAKSRDRENAQARGSPLQTNAKLSSESTSARAQLVGAEEASEKARHDLEDATKALTKSEEEGRRAAESVQRLEEELEVADARWKAAQGQIDNAARREKRSIEEARAQLKEALESKNKEMDAALREAETHAQRRSMEAKASQRAAERTHERALANVREEAEKKLAEGEAKRVRDVSDARRKSQAVVEALQTLQGELRNSEAKGSGLERQVSQLSARMSRAGGSSMAAXXXXXXXXXXXXXXXXXDGSSVGGSXXXXXXXXXXXGSKARGAEVTEAEIASLRRQMKAATQAKEAAQRGALDARSCAEXXXXXXXXLEDSLXXXXSEMLAALERLNALKIRQQEVKEGAREAEEDLRSL 2514
M G RAPPSEPA+G S L D DVV L +GQAV+ DV+EALA LASALSSVSDND IIR+VK RFDER+EA A+L + TEE +AEKE R LN+AQ+DRE++L++E+ RLERAV AE++CT+TQRE + A ++ADKEI+RLR +SSAE+DAA WQ++ANAGE RL+SMTAEV ALHEAMAGLHGEMGAVQRELD K+SQDK+A DL+RA+GR+RKSQE C +T+A+AKDAEK LRKET ERER+SAE +L+Q S++ E + + LT EIKRLKESEG H S DKLNATNRELNALLQ LS DLE+AK+ GES KRA+A A EVG+++ + +RV+EALAA ++RL A+ R+K LKEAL K++AEA AKT E DRQRGELDLLEREKHDL+LDVQERVR KEATADAER + R E+ RLK+ ESA LAA++S+ KTLDEL ARRGT MQDERIE LRSEL TLRRTLEQTTEAAK+RDRE+AQ Q NAKLSSESTSARA+++ AEEA EKA D ++A KA K E++GRRAA+SVQRLEEELE+A+ARWKAAQGQ+ A RREK EEAR +++EALESK+KE ALRE ETHA RR MEA+AS RA ER H+RAL +REEA+KKL E EA+RVR+VSDAR+KS+AVVEALQTLQGEL SEAKGSGLERQVSQLSARMSRAG SS+A DGSS XXXXXXXXXXX S ARG+EVTEAE+ SLRRQMKAAT+AKE AQR AL+AR A+ LE+SL S+MLAALERLN LKIRQ+EV+E ARE EEDLRSL
Sbjct: 1 MDGTRAPPSEPAKGDQDSLLPDEDVVTKLQQGQAVKADVREALARLASALSSVSDNDTIIRTVKHRFDERKEARADLWRVTEEARAEKERRDCLNKAQADRESALQNEVERLERAVKIAENSCTDTQREGERAAASADKEISRLREKSSSAEKDAATWQQRANAGELRLESMTAEVSALHEAMAGLHGEMGAVQRELDGTKTSQDKLAADLSRAEGRYRKSQEACLSTIAKAKDAEKRLRKETEERERVSAELEKLVQMSKEEETKNVTLTAEIKRLKESEGVHRSGSDKLNATNRELNALLQSLSTDLEEAKAAGESSGKRAEALAHEVGVKEGDVQRVREALAATEARLAASGRDKELLKEALSKSSAEAHAKTAEFDRQRGELDLLEREKHDLVLDVQERVRVHKEATADAERYRERLEQAENRLKEGESATLAAELSRKKTLDELGEARRGTVMQDERIEALRSELTTLRRTLEQTTEAAKARDRESAQRLVQLSQANAKLSSESTSARARVIDAEEAVEKAGQDAQEAAKAQAKLEDDGRRAADSVQRLEEELEIANARWKAAQGQLVAANRREKEFAEEARRRMREALESKDKEKVTALREMETHADRRFMEAEASHRAVERNHDRALVAIREEAKKKLLEEEARRVREVSDARKKSKAVVEALQTLQGELTQSEAKGSGLERQVSQLSARMSRAGSSSVAPAGGNGG-----------DGSSAXXXXXXXXXXXXXXSSGARGSEVTEAEMTSLRRQMKAATEAKETAQRSALEARLRADEETKKRSSLEESLCRKESDMLAALERLNQLKIRQKEVEEHAREGEEDLRSL 827
BLAST of mRNA_P-littoralis_Contig201.8.1 vs. uniprot
Match: A0A836CBP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.150e-8 Identity = 160/599 (26.71%), Postives = 250/599 (41.74%), Query Frame = 1
Query: 526 VGALHEAMAGLHGEMGAVQRELDIAKSSQDKMATDLARADGRHRKSQEECSATLARAKDAEKGLRKETGERERLSAEFTRLIQASQQGEAETLALTTEIKR-----------LKESEGAHSSNIDKLNATN------------RELNALLQRLSADLEDAKSTGESYSKRADASALEVGLRDEEGRRVKEALAAAQSRLEAAEREKGFLKEALGKATAEAQAKTTEVDRQRGELDLLEREKHDLILDVQERVRAQKEATADAERCQARAEEVGKRLKDEESAKLAADISKNKTLDELSNARR---GTAMQDERIEVLRS----ELAT---------LRRTLEQTTEAAKSRD-------------------------------RENAQARGSPLQTNAKLSSESTSARAQLVGAEEASEKARHDLEDATKALTKSEEEGRRAAESVQRLEEELEVADARWKAAQGQIDNAARREKRSIEEARAQLKEALESKNKEMDAALREAETHAQRRSMEAKASQRAAERTHERALANVREEAEKKLAEGEAKRVRDVSDARRKSQAVVEALQTLQGELRNSEAKGSGLERQVSQLSARMSRAGGS 2112
V LH AMA LH E+G RE A ++DK+ DLARA+ R K+ A+ ++ + R E L+ T + SQ+ AE A + +R L +++ A+ + K T+ REL AL Q+LS + DA E+ R A + E+ + + L Q AAE E+ + AQ + +E+D R + LE EKHD++L+ Q + A A AD+ C +E R + E+ A AA+ EL+ AR G +D + VLR+ L+T L R ++ + +++D RE AQ QTNAKLSSE +S R EE E L+ AA+ VQ LE++ E+A AR +A Q++ A RE + ++ALES+++++ A RE+++ QR+ L +R R+V +A+R+++AV AL+ +QG+L E + S L ++ Q+ A +S A GS
Sbjct: 301 VSELHAAMAALHAELGVTSREGQAAVEARDKLKRDLARAEARADKAAGALEVAEAKLREGDHQARLAA---EALTVARTAAEEQSQRFSAERAAFLAQAERSDGQLHDFKAALSDADAANRLFLKKRFLTSTMCASCVVRGGIRELKALAQKLSQEAADAARDKEA---RGGEDARALASAHEQLQSIDRQLKEEQGLRRAAEAERXXXXXXXXXXVSTAQQQRSELDGLRQAVSRLEAEKHDIVLEAQRQQAAA--AAADSAAC----DEQRLRGESEQRAHAAAE--------ELALAREQLAGLQARDGMLWVLRNFNYTYLSTIMIKFFMNRLPRRAQKANQGVRAKDSSTNYWAGLLSTDVLSNAALLQAXXXXXXXXREAAQRLVELSQTNAKLSSELSSLRKHADQLEEEKEAFDQTLQ--------------AAAQRVQTLEDDAELAGARQQALNAQLEAARARETK---------RQALESRHQQVLLAARESQSAVQRQ-----------------------------LGVEVERRQREVGEAQRRTKAVGSALEVVQGQLAEEERRSSALRDELQQVKA-LSAAPGS 826 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig201.8.1 >prot_P-littoralis_Contig201.8.1 ID=prot_P-littoralis_Contig201.8.1|Name=mRNA_P-littoralis_Contig201.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1361bp MQGIRAPPSEPAEGCDRSPLSDGDVVKNLLRGQAVQNDVQEALASLASALback to top mRNA from alignment at P-littoralis_Contig201:53677..69866- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig201.8.1 ID=mRNA_P-littoralis_Contig201.8.1|Name=mRNA_P-littoralis_Contig201.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16190bp|location=Sequence derived from alignment at P-littoralis_Contig201:53677..69866- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig201:53677..69866- >mRNA_P-littoralis_Contig201.8.1 ID=mRNA_P-littoralis_Contig201.8.1|Name=mRNA_P-littoralis_Contig201.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4083bp|location=Sequence derived from alignment at P-littoralis_Contig201:53677..69866- (Pylaiella littoralis U1_48)back to top |