mRNA_P-littoralis_Contig201.52.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig201.52.5
Unique NamemRNA_P-littoralis_Contig201.52.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: D8LRL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.240e-122
Identity = 218/345 (63.19%), Postives = 242/345 (70.14%), Query Frame = 2 
Query:  206 MFKFGFYPPAEATEXXXXXXXXXXXXXXXXXXXXTDDARLDAAAT-ADQNAASRVI---EGAARTAIP--SGVTAP--PAQALAWQSGGLTLVRAVPSANACPEAPQESDLVPGVYEGGLKVWEASLDLVDHLVSSGGDG----NGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGLRVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRD---------KAAATGRLVCLDTGVIDTGKGNIREILRVSWRDEEAAARAGAVAIA 1177
            MFKFGFYPP+    XXX                    A  D A T  DQ AA R+    +G A T     +G TA   PAQA+AW+S  LTL+R VPSA ACP  P+ESDLVPG+YEGGLKVWEASLDLV+HL+S+        +GG   +      TGR K VLELGCGHGFPGIVALQQG+RVCFSDFNREVIEQVTIPNV+LNVE  +WPLAEYYSGDW+SLSPLLEERDGG LFDLILTAETLYTT VADKVL MV +HL+PGGQALVASKRFYFGTGGSTQYFR+          A A+ RLVC D  VIDTGKGNIRE+LRVSW + E  A  G    A
Sbjct:   35 MFKFGFYPPSSNXXXXXEQLSAV--------------ANEDTAVTDPDQYAARRIRHVGDGGATTRADGEAGTTATSQPAQAVAWKSEDLTLLRVVPSAKACPGVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSCPVGLDGGSGGDASVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFREVIAARRCSAAAEASRRLVCSDVAVIDTGKGNIREVLRVSWEEPEEGAEPGVTESA 365
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A6H5JBA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA0_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 1.250e-109
Identity = 206/350 (58.86%), Postives = 233/350 (66.57%), Query Frame = 2 
Query:  206 MFKFGFYPPAEATEXXXXXXXXXXXXXXXXXXXXTDDARLDAAAT-ADQNAASRVI---EGAARTAIPSGVTAP------PAQALAWQSG---GLTLVRAVPSANACPEAPQESDLVPGVYEGGLKVWEASLDLVDHLVSSGGDG----NGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGLRVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRDKAAA---------TGRLVCLDTGVIDTGKGNIREILRVSWRDEEAAARAGAVAIA 1177
            MFKFGFYPP+    XXXXXX                 A  D A T  DQ  A R+    +G A      G+ A       P++   W+ G    L+    +     CP+ P+ESDLVPG+YEGGLKVWEASLDLV+HL+S+        +GG   +      TGR K VLELGCGHGFPGIVALQQG+RVCFSDFNREVIEQVTIPNV+LNVE  +WPLAEYYSGDW+SLSPLLEERDGG LFDLILTAETLYTT VADKVL MV +HL+PGGQALVASKRFYFGTGGSTQYFR+  AA         + RLVC D  VIDTGKGNIRE+LRVSW + E  A  G    A
Sbjct:    1 MFKFGFYPPSXXXXXXXXXXSAV--------------ANEDTAVTNPDQYTARRIRHRGDGGAEVQ-QQGLKAKQAKQQLPSRHKLWRGGLRTSLSSASFLQRTATCPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSSPMGLDGGSGEDGSVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVGRHLAPGGQALVASKRFYFGTGGSTQYFREAIAARCNSAAVEASRRLVCSDAAVIDTGKGNIREVLRVSWEEPEEGAEPGVAENA 335
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A835Z957_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z957_9STRA)

HSP 1 Score: 183 bits (465), Expect = 5.950e-49
Identity = 105/240 (43.75%), Postives = 137/240 (57.08%), Query Frame = 2 
Query:  500 QESDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGLRVCFSDFNREVIEQVTIPNVKLNVEERY-----------------------------WPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVSW 1132
            +E+DLVPGVYEGGLKVWE S+DL+++++         V+  ++        KRV+ELGCGHG PG+ AL+QG  V F+D+NREV+E  TIPNV+ N  E                                  A +Y GDW  L  +L + DG E FDLILTAETLYT     ++  ++   L+PGG ALVA+KR+YFG GGS  +F+   A    + C    VIDTG  NIRE+L VSW
Sbjct:   64 EETDLVPGVYEGGLKVWECSVDLIEYMLD-----RPEVYGPEKMA-----GKRVIELGCGHGLPGVYALRQGAHVVFTDYNREVLEHATIPNVRANCPEALPSSLSIDTSGGRGGGMSAGQGSAQGVVNAGGRAAFYFGDWGGLPEMLAD-DGEERFDLILTAETLYTATATVQIHRLIETLLAPGGHALVAAKRYYFGCGGSCAHFKQLVAPP--MACETACVIDTGVANIREVLLVSW 290
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A1V9YGQ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGQ4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.130e-45
Identity = 97/211 (45.97%), Postives = 128/211 (60.66%), Query Frame = 2 
Query:  506 SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGL-RVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVSWR 1135
            SDL  GVYEGG K+WE S+DL+++L            A  EA  +  R  RV+ELGCGHG PGI ALQQG   V FSD+N EVI+  TIPN +  V   +   A +YSGDW  +S  +   +    +DLILTAETLYT  V   +L  + +HL P G ALVA+K +YFGTGGS  + +   AATG +V       +  + NIREI++V+++
Sbjct:   77 SDLETGVYEGGFKLWECSVDLIEYLE-----------AHKEAFGIGTRSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPNAQ-RVASAHLNRATFYSGDWGHMSAAMTAANEDTEYDLILTAETLYTEEVTIALLETIKRHLKPSGVALVAAKTYYFGTGGSVHHLKSLIAATGTMVATTVWNGNDCRSNIREIVQVTYK 275
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A7S3HG77_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG77_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.100e-44
Identity = 102/213 (47.89%), Postives = 127/213 (59.62%), Query Frame = 2 
Query:  500 QESDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGL-RVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEER--DGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVS 1129
            +E+D++PGVYEGG KVWE S+DL   L+            +   T+      R +ELGCGHGFPG+ AL+ G  RV FSD N EVI  VT PN+ LN  +     AE YSGDW+ LS  +  R  D G+ FDLIL+AETLYT    +K+L M+L+HLS  G AL+ASKRFYFG GG T        A G L      V   G  NIREI+R++
Sbjct:   76 KETDIIPGVYEGGYKVWECSVDLTAMLL------------QKACTLPELSTCRAIELGCGHGFPGVAALKLGCPRVVFSDLNAEVINAVTWPNIFLNARD-IMNRAECYSGDWDELSSTVLSRGSDDGK-FDLILSAETLYTEASCNKILSMILRHLSNTGVALIASKRFYFGVGGGTYTLETLVQACGVLNYHVEQVYQDGASNIREIVRLT 274
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A8J4B1M0_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1M0_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 1.610e-42
Identity = 102/241 (42.32%), Postives = 141/241 (58.51%), Query Frame = 2 
Query:  446 GLTLVRAVPSANACPEAPQE-----SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDE-ATVVTGRRKRVLELGCGHGFPGIVALQQGLRVCFSDFNREVIEQVTIPNVKLNVEE----RYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPG-GQALVASKRFYFGTGGSTQYFRDKAAATGRL-VCLDTGVIDTGKGNIREILRVSW 1132
            GLTLV+ + S++       +     SDLVPG YEGG K+WE SLDL   L+S     +  V  + E +T + G  KRVLELGCGHG PGI+AL  G  V F D+N EV+ ++TIPNV  N+E     R  P   Y+SGDW  +   L  R  G  +DLIL++ET+Y+    +++L  + + L P  G AL+A+KR+YFG GG T+ FR+     G   V +   V D   GN+RE+L + +
Sbjct:   57 GLTLVKGIISSDEAAAILSDQRIAASDLVPGKYEGGFKLWECSLDLCKTLLSRYSVASERVLTDSEFSTELHG--KRVLELGCGHGLPGILALVSGAEVHFQDYNHEVLRRLTIPNVIANMERLPRSRPRPATRYFSGDWRLVGEHLTSRGYGGHYDLILSSETIYSVPAQERLLECIKQLLQPPHGVALIAAKRYYFGVGGGTKSFRNLVEEDGIFEVSVVAQVDDKASGNVREVLMLKF 295
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A485L4J9_9STRA (Aste57867_15473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4J9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.280e-42
Identity = 97/219 (44.29%), Postives = 130/219 (59.36%), Query Frame = 2 
Query:  506 SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGL-RVCFSDFNREVIEQVTIPNVKLNVEERYWPL-AEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFR----DKAAATGRLVCLDTGVIDTG--KGNIREILRVSWRD 1138
            SD+  GVYEGG K+WE ++DL+ +L+                 + +    RV+ELGCGHG PGI AL QG   V FSD+N+EVIE  TIPNV  N         A YYSGDW  +S L+  +    LFDLILTAET+YT  VA  +   +++HL  GG ALVA+K +YFGTGGS  +F+    D  +  GR + +   V D+   + N+REI+RV++ D
Sbjct:   84 SDIQTGVYEGGFKLWEGAVDLIQYLMRHA----------SSFPMASQADYRVMELGCGHGLPGIYALLQGAAEVYFSDYNKEVIELATIPNVLRNASPIVAAAKARYYSGDWQLVSDLMHTQGVPPLFDLILTAETIYTESVAITLAQTIVRHLKRGGVALVAAKTYYFGTGGSVHHFKQLIDDVRSTDGRRLLVAETVWDSNDARSNMREIVRVTYAD 292
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: T0R0A7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0A7_SAPDV)

HSP 1 Score: 162 bits (411), Expect = 6.760e-42
Identity = 94/210 (44.76%), Postives = 124/210 (59.05%), Query Frame = 2 
Query:  509 DLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGL-RVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVSWR 1135
            DL  GVYEGG K+WE S+DL+++L     D   G               RV+ELGCGHG PGI ALQQG   V FSD+N EVIE  TIPN      +R    A +YSGDW ++S  +   +    +DL+LTAETLYT  V   +L M+ +HL   G ALVA+K +YFGTGGS  +F+D  A  G +V       +  + NIREI++V+++
Sbjct:   77 DLETGVYEGGFKLWECSIDLIEYLQQHQADFPIGACG-----------LRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPNTMRCAGDRLHH-ASFYSGDWANVSEAMAANEDAS-YDLVLTAETLYTEDVTISLLAMIKRHLKRSGVALVAAKTYYFGTGGSVHHFKDLVAREGDMVATTVWNGNDCRSNIREIVQVTYK 273
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: M4BGT3_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGT3_HYAAE)

HSP 1 Score: 161 bits (408), Expect = 2.670e-41
Identity = 96/219 (43.84%), Postives = 133/219 (60.73%), Query Frame = 2 
Query:  506 SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGLR-VCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERD----GGELFDLILTAETLYTTVVADKVLGMVLKHL--SPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVSWRDE 1141
            +D+  GVYEGG K+WE +LDLV  L +    G         AT+       VLELGCGHG PGI ALQQG   V FSD+N+EV+E  T PNV+ NV+E+ +  AE+Y+G W+S+S  +E  +        FDLILTAET+YT  VA ++   + +HL  +P  +ALVA+K++YFGT GS Q+F     A G            G+ NIREI+++++ D+
Sbjct:   82 TDVQTGVYEGGFKLWECALDLVKLLETQRRQG---------ATMSAS----VLELGCGHGLPGIYALQQGAELVTFSDYNKEVLELTTCPNVRQNVDEQVFERAEFYAGAWSSMSQYMETMELKTQDQMQFDLILTAETIYTDAVAVELYQTIKRHLRRAPNARALVAAKKYYFGTNGSVQHFVGLVRADGVFTADTVWQERDGRSNIREIVQLTYVDK 287
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BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Match: A0A024UPA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPA8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.310e-41
Identity = 92/211 (43.60%), Postives = 122/211 (57.82%), Query Frame = 2 
Query:  506 SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRKRVLELGCGHGFPGIVALQQGL-RVCFSDFNREVIEQVTIPNVKLNVEERYWPLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLKHLSP-GGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGNIREILRVSW 1132
            SD+  GVYEGG K+WE ++DL+ +L            A +   +      RVLELGCGHG PG+ ALQQG   V FSD+N EVIE  TIPN++ N        A +YSGDW  +S  +        FDLILTAET+YT  V+ ++   + +HL   GG ALVA+K +YFGTGGS  +F+   A  G +V       +  K N+REI+ VS+
Sbjct:   85 SDIQTGVYEGGFKLWECAVDLIQYL------------AANAPNLPVHNGWRVLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANANDLTKATFYSGDWQLMSEDMLAHGTDMEFDLILTAETIYTESVSVELFQTIQRHLKRRGGIALVAAKSYYFGTGGSVHHFKSLVAQDGTMVARTVWESNDAKSNVREIVHVSY 283
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.52.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL4_ECTSI2.240e-12263.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBA0_9PHAE1.250e-10958.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z957_9STRA5.950e-4943.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9YGQ4_9STRA2.130e-4545.97Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S3HG77_9STRA4.100e-4447.89Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J4B1M0_9CHLO1.610e-4242.32Uncharacterized protein n=2 Tax=Volvox africanus T... [more]
A0A485L4J9_9STRA4.280e-4244.29Aste57867_15473 protein n=1 Tax=Aphanomyces stella... [more]
T0R0A7_SAPDV6.760e-4244.76Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
M4BGT3_HYAAE2.670e-4143.84Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A024UPA8_9STRA3.310e-4143.60Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig201contigP-littoralis_Contig201:213442..220053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRL4
Preferred nameMETTL18
PFAMsMethyltransf_16
Model size1966
Max annot lvl2759|Eukaryota
KEGG koko:K14837,ko:K18803
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006417,GO:0006450,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008757,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016043,GO:0016740,GO:0016741,GO:0018021,GO:0018064,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031072,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032259,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0036211,GO:0042038,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:1901564,GO:2000112
Exons8
Evalue4.43e-127
EggNOG OGsCOG3897@1|root,KOG2920@2759|Eukaryota
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-12_000250.1
EC2.1.1.85
Descriptionmethyltransferase activity
Cds size999
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig201.52.5prot_P-littoralis_Contig201.52.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig201 213647..219291 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789988.1336493-UTR-P-littoralis_Contig201:213441..2136461680789988.1336493-UTR-P-littoralis_Contig201:213441..213646Pylaiella littoralis U1_48UTRP-littoralis_Contig201 213442..213646 +
1680789988.2376015-UTR-P-littoralis_Contig201:219291..2200531680789988.2376015-UTR-P-littoralis_Contig201:219291..220053Pylaiella littoralis U1_48UTRP-littoralis_Contig201 219292..220053 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789988.1470711-CDS-P-littoralis_Contig201:213646..2138121680789988.1470711-CDS-P-littoralis_Contig201:213646..213812Pylaiella littoralis U1_48CDSP-littoralis_Contig201 213647..213812 +
1680789988.1570363-CDS-P-littoralis_Contig201:214485..2145961680789988.1570363-CDS-P-littoralis_Contig201:214485..214596Pylaiella littoralis U1_48CDSP-littoralis_Contig201 214486..214596 +
1680789988.172133-CDS-P-littoralis_Contig201:215506..2156911680789988.172133-CDS-P-littoralis_Contig201:215506..215691Pylaiella littoralis U1_48CDSP-littoralis_Contig201 215507..215691 +
1680789988.181616-CDS-P-littoralis_Contig201:216235..2162811680789988.181616-CDS-P-littoralis_Contig201:216235..216281Pylaiella littoralis U1_48CDSP-littoralis_Contig201 216236..216281 +
1680789988.1909497-CDS-P-littoralis_Contig201:217011..2171601680789988.1909497-CDS-P-littoralis_Contig201:217011..217160Pylaiella littoralis U1_48CDSP-littoralis_Contig201 217012..217160 +
1680789988.2020848-CDS-P-littoralis_Contig201:217707..2177791680789988.2020848-CDS-P-littoralis_Contig201:217707..217779Pylaiella littoralis U1_48CDSP-littoralis_Contig201 217708..217779 +
1680789988.2169294-CDS-P-littoralis_Contig201:218383..2184691680789988.2169294-CDS-P-littoralis_Contig201:218383..218469Pylaiella littoralis U1_48CDSP-littoralis_Contig201 218384..218469 +
1680789988.2285933-CDS-P-littoralis_Contig201:219107..2192911680789988.2285933-CDS-P-littoralis_Contig201:219107..219291Pylaiella littoralis U1_48CDSP-littoralis_Contig201 219108..219291 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig201.52.5

>prot_P-littoralis_Contig201.52.5 ID=prot_P-littoralis_Contig201.52.5|Name=mRNA_P-littoralis_Contig201.52.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp
MFKFGFYPPAEATEEQQQHQQRPPSPPTAADAAATDDARLDAAATADQNA
ASRVIEGAARTAIPSGVTAPPAQALAWQSGGLTLVRAVPSANACPEAPQE
SDLVPGVYEGGLKVWEASLDLVDHLVSSGGDGNGGVFAEDEATVVTGRRK
RVLELGCGHGFPGIVALQQGLRVCFSDFNREVIEQVTIPNVKLNVEERYW
PLAEYYSGDWNSLSPLLEERDGGELFDLILTAETLYTTVVADKVLGMVLK
HLSPGGQALVASKRFYFGTGGSTQYFRDKAAATGRLVCLDTGVIDTGKGN
IREILRVSWRDEEAAARAGAVAIAGDGRKASR*
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mRNA from alignment at P-littoralis_Contig201:213442..220053+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig201.52.5 ID=mRNA_P-littoralis_Contig201.52.5|Name=mRNA_P-littoralis_Contig201.52.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=6612bp|location=Sequence derived from alignment at P-littoralis_Contig201:213442..220053+ (Pylaiella littoralis U1_48)
CAAAATGTACTCCGGAGTATAAGGTAGACTACCGTATGAAGACTCCCGCG
GGACTGTCACTTTTTTCGTTTGCTCCCTTATACGCGGTACGTGATATGAC
CCTTTCCCTCTCCCCCTTTCTCTCCACGTGAGCTACTGTTGCTGCTGTCG
CTGCTGCTTTTGATTACCGTATCTGTGACTCCATTTCAATCACGCATCGA
AAGCAATGTTCAAGTTCGGTTTCTATCCGCCAGCAGAGGCGACGGAGGAG
CAGCAACAACACCAACAACGACCCCCTTCTCCTCCGACTGCTGCTGATGC
TGCTGCTACCGACGACGCCCGTTTGGATGCCGCTGCCACTGCCGATCAAA
ATGCTGCTTCGAGGGTCATTGGTGAGACGGGGTGGGTGGGGGGCGAGAAC
GAGGGCTCTGTTTGGGTGGGCGTAAAATCACTCTCAAACAAACTGGAAGT
TATTGTCTGCGTCAAATTGACATGTCCGATGAATTGCCTCGTACTTCGTA
TCGTACATGCAGTCTACAAACGATCATGCCTTGTACTCCTGTAAGACCAA
CGTCGGGCGGAGCTGTCTTTGACTTCAAACCAACTCGACCGCTAGGCAAA
AGTGCATGCATCTCCTGGGCAACAAGACGGCAGCAGTCACGGTTGTTCCT
TCGCAAGCGCATGCGTGCGGAGAGCAGGATGCCTCCCATGAAGATGCCCG
TCATGAACTACTGCTTCACTGCCAGCATCGAGAGACGCACACCATGAACA
AAAGATTTGAAGGAACTTGAAGAAATACTTAAATTCATGAACGACGTACA
CAGCAGTACATGAGATTGGCAATAACGGCCGCATATGATATGATGCTGTG
CTACTCGTGATGGTGAGATACTTGATGCACGGCCAGAACATTCAGTACCC
GCGGCTGCCCCGGGGACCTCAAGTGCCCCCCGTTCTCAAGCGGCACGGAC
CGAGCATCGGCGAGCTTGAAACTTATCCATAAACCGCTACCGAGGTCTAC
GCTGACCGTACCGTTTTTGTTTACTGAATACAACGCCACATCAGAAGGTG
CAGCGAGGACAGCAATACCAAGTGGAGTAACAGCCCCGCCGGCGCAGGCA
CTGGCGTGGCAGTCTGGAGGCCTCACTCTCGTACGAGCCGTCCCTTCCGC
AAACGGCAAGTGCATTCCAGGCGTACGCACACGCGCGAGCACACACATGC
ATTGATTGATATATTTACCTATGCTATCCTGTAACCAACCTTGTGTTTTT
GAGTGTACCGCAAGTTTCGTACTCCGATGTGCATGACAAACGGTGACAAA
ACCAAGGGGCTGTATGGAAATGTGGTGTCGAATATATACACGCTCGGTGG
TTCAGAGTCTGCGGCGTTTTTTACGGGGTGTGATAATCGCTGCGTTTTTT
GTGTGCTGACTGCTGTATGGTGTTAGGTTCTTTTGGTCCAGACTAGATCA
ATCCAAACCATCCGCAAACACCATCCCCCCCGAACATTTTTGTTGTTGTT
GTCTTCACATTAAAAACCATTCCGATCTCTGCCCAGTACCTTCCAATGTG
CGTACTCCACCGATCAGGGACGATTTCCGTGGTCACAGGCTGCATACCCC
AAACGAGGTATGTAGTACTCGGGAGATACCCTCAATCCACCAAACAATGG
CACGACAAGGAGACTCCGGCAAAACAAAAAAATGCATTTTAGTACCGAAT
GCTCCCATTACTTGACGTCCGAACACCGAATGTTTAATGTTATCTAAACT
TCAAGTCTGACACTCTCCATGTACAATACAGCCGAATCGAGCGCTCTCGA
AGAACCCACATCCAAGCACAAACCCAGCTCAGCCGGAACTTAAAACGCTG
GTCATAACCAAGTAAACCCGCCTTTCTTGTTGTCACAACCATCGTATAAC
TCGGCGCCGTTCCGGTTTGGGATCAAGTTCCGGTAGTACAGCAGTATCAT
AGCCCCCTGATGTGTCATGATTGCAAGGATGAAAAACGGGACGGACGGTA
ACATCAGAAAATTTGTTGGCCCCGCCCGCATTGCATCAAACCCACATCGG
TCGCAACGATTGTAGCTTGCCCGGAGGCCCCCCAGGAGAGTGACCTCGTG
CCAGGAGTCTACGAAGGAGGTCTCAAGGTTTGGGAGGCCAGCCTTGACCT
GGTGGACCACCTGGTGTCCTCCGGCGGCGATGGCAACGGCGGCGTGTTCG
CGGAAGATGAAGCTACGGTGGTTACTGGGCGACGAAAAAGGGTGCTTGAG
GTGGTGTACCATTTGGCGTGCATGACGTTTTGCTCAGTTGTAATTTTTAC
GTGGTTGTACTATTGCTGCTGCTGCTGCTGCTGCTGTGCGCGCGGTGGGT
GCGTAGAGGGTGAGATGGGCGGATCGTAGTTGAGGGAAGGGATCGTGTGC
GTTGCCTGTCCCACTCTCACGAGTAAGGTCGTTGACGACCATGAAACGAA
TCTGAGATGAATCTTCAGATATGTCATCAGGCACGTGAGAGACCTGCGCT
GGTCGAGTCATTGCAGCCGTGTGGCGACTCACGATGTGCGTCGTGAGGTT
ATTTCTAACTTTCTGCAACCATCACGGACAGGCCGTTTGTTGTATATGCG
TGAGCTGCGGTGTTTTTTTGTGTTCTGTTTTATGTCTGCGACGTGAAACG
AGACTCCGTACACCAATGTGTTACTGAATGGGCCATTTGAAGAGAACGCT
AACGTTCCCCCCGCCCACGCTCTAAACAGCCGTTCATTCTCCGTGGCTGC
TTGACTGGTGTTGCTGCCGTTACCCTGAAATACCGGTACCGCAGCTGGGT
TGTGGGCACGGATTTCCGGGCATCGTGGCTCTCCAACAAGGTAATTGTAC
CGTGGTGGCTCACCTTGCTACAGTAGCGCTACAATAGATCCGTAATTTTG
TACGGGGCTATGTAGCTCCAGACCACTTTGATGTTGAGTTGAAATGCTGA
ATGTCCTTGAGACTGACTTGCCCGATGGCAGCGGCTCTCCGTACTGCTTT
ACCCGTAGACGGGCCCCGGGATGTTTTTTTTATAGTTCTCGCGAAAAGAG
TTCTTCCAAAATCCACCACATCTAACCGTCGTGCACAGAAATTATGCCCA
CCGATATCACGATGAGTCCTGTCCACTACCAGGTACCAGGTTGTTTCTAT
TCGGACATCAGCACACCAAAATCGGTCGTTTCTACGCGCGGTCTTGTGTG
TCTCACTTTATTTCTTCATCACGGCAACGACAAAATAACAAAACGCGCCA
ACACACACATTGACTCGCGAAGTCTCCGCCTGACAGCACTGCTGTCGTTG
GTATGAGAACTGCTGACAGCTACAAATTCTACCCTGGCTGCGATGAGTTG
CGAGACAGTGTGCGTAGCATGGCCATACGCGCCTTCCCTTTGGTCGAAAT
GTGCCAAGCATAGCAGGTTGAAATTGTCCACTCTATCTCTTGTCTCGAAA
ATATGCGTAGCCTTATCATGCACTGTGTAGTTCCAAGGAAGAGACAAAGT
GAGAGACCTGCTCGCCCCCAGTGTTTTTTTTTTCAAAAGTCTAACGTACT
CGATACATGCAATGGTGCAGGACTGCGTGTGTGCTTCTCGGATTTCAATC
GCGAGGTGATCGAACAGGTCACCATCCCGAACGTCAAGCTCAACGTGGAG
GAGCGCTACTGGCCCCTAGCGGAGTACTACAGCGGGGATTGGAACTCCCT
GTCCCCTCTCCTTGAAGAGGTGATGCCATGTGCTGTGATGGGTTGCGTTG
TGTGTTGTGATGAAATCGACGCGCCCGTTGTTGTTTTTCGAAAAGTAAAG
GCGTCTCTTGATGTGAAACCGTCGATGTATAGCTTCAGGCGGAAGGAAAC
ATTCAGGTAGAAGCGGCATGATTTGTTGTGGTTTACTGCGATGGTCCGGT
TTCGCCGTGTGTAGCGGTAAATCGGTTCATCAGTCTGCCTGATTTACCTG
TTGTTTCTGGTCTTAACCTAGGTGGTGGTAGGCCGTTAACGTGGTCCTGT
TTGCCGCTCCCTTTGCTTCTCCCTCCCTCCTCCTGCGTGCTCCCCTATGC
GTGCCCCCCTCTGTGGGTCCCCCTATGCGTGCCCTCCTTTGCACACGTCT
CTTTTAACTCACTCATGTCATTACCTAATGCGATCCCTCTCCCCCTTGGC
CTGGTTCTCACGTTTCTTTTCCTGATGTATTTCGGCACGGTTGGCGCCGG
ACAAAACTCTCACTCACTACACACGTTGGGCATTCAACTGGTGTCACATC
ATGTTGGGCTTTTAAGAGGGACGGAGGCGAACTGTTTGACCTTATCTTGA
CGGCGGAGACCCTGTACACTACCGTGGTCGCCGACAAGGTGGGCAAGGCA
GGTGCGCCTGACGCACGTGAAGTCCGGGTGTTGCCACCGAAACGGCTTGC
TTGGGATGAAAACCGTGTCAATAGGACAAGTACACGTCTGTGCGTTTTTA
AGTCGCCGTTGCGGTATGCCGGGAAGTATTGCCAAGCCGTCCCCTACCTT
AGCCACGGTATCTACACACGATTGTATGGCACACAGCAGTTAGCTCAGTC
CGGGGACATGGGTGACATCATTTAACACATTAGGCCGTATTTTCTTGAGC
ATGGTAGTCACGTCTGTCGGTGCAGCATCTATCATATAATCATACACACG
TTACTCCGAACCACCTATGGCGTGAAAAAAAGCAACTCTTCTCTCCCGTG
CGATGGCAAATCCGGTGGGATAGCGAACAAAACCGATGCGGTCTCCCCCC
TCTTGGTACTGCTGTACTCCGAAGCATTTATTTCCTCTGCCTGTGTTGAG
TGCCGTGTTGACTCTATCCGCGCTTCACCGTGCCCCCACGCAAAAAATAT
CTACCAGAGTCCAACGAGCGACACTCGGGGACAACAATAAATGCTGCAGC
AACAGCCCCAAACCCCGCCTACCGAAAATCGAACCGACACAGGTGTTGGG
CATGGTGTTGAAACACTTGTCGCCGGGAGGTCAGGCCCTGGTGGCCTCCA
AGCGGTTCTACTTCGGGACCGGAGGAAGGTTGGTTTAGTGTTAGGTTGGT
TGGTTCGGCTGGTTTGTTTATTTCACGAGCTTGTCGGGCGAACAACGGCG
GCCAAGTGAGAAAGTGGTTGCAATGCACGCACGATGGCAAGAATGCACTT
GTTCTCCGGATGCATTTCATCTGATGCCATTCTGCTTCTTGTGTCGCGTC
TTTTTATCGGTACGCCTGACTGAGTGAACCTCCTCTCTTTTGACAGAGTG
AACCTCCTTCCTTTTGACTGAGTGAAGATCCTCCCTTTCGACTGAGCACG
AGAAGGGTTACAAATGCATGTTCAATGTGTAGGCGAAGACTCGAACCCAA
CCTCGGGAAATTAACAACCCCAGCGGGAAAAGGCGGTGTGTTTTTATTCC
TGTAAGTATAATTAAGGTGTTGATTTGGCACGCACCGGGAGGCACCAACA
TCGTAACACTTGCCACCGTAGATTAAAAAAGAGTGCAGTCATTGCGAAAC
AAAAGGGACGAGCACGCACGTTTTTCAGAGGGAATATTTATACTCCGAGT
ACCAAGTATGCTTTTTCGACCAATCAGAAAACCCCCCGTGCGTGTTTGAC
AGGTGCATGCGACTATCTTTTTCTGTTTATTAATTCGTAACTTTTGGCAA
ACTCACCTTCTCACAGCACTCAGTACTTCCGGGACAAGGCGGCAGCGACG
GGGCGCCTTGTCTGCCTCGACACGGGCGTCATTGACACCGGGAAGGGCAA
CATCAGGGAGATTTTGAGGGTTTCCTGGAGAGACGAGGAGGCGGCAGCGC
GGGCGGGGGCCGTAGCGATTGCAGGGGATGGACGCAAGGCGTCGAGATAG
CACGTACCGTACACTACGACGAGAGAAAAGCAGTCCGCCAAGCCTCCTCG
TCATGCGGGTGGACCACGCCTGTCCGTAGCACCATCTTCGCTTAAGTTAC
AAAAAATCGAGGTTGGCATCTCCTCCGACAGGGTGCGAGTTGAAGAAGAC
GACACACTTCGAAGTACATATCATACTTGTACACGATATCATAGCGTACG
TACGAATCCTGAAAGCCGCCCCAACGACGGCCTGGCGTCGAGATGGTTGA
CCAACCCCATGTACCGATGGCCGTTGCTCCTGCGTGCCAGTGGTGCGGCC
TGGTCGACCTGCTCGGCGTAGCACCTTCTGTGTTCGAACCATGGAGGCAC
ACTTTTGCCGGAAGTGCCGGAGGCATTGTTGGTTTATTTCTACAAGTATG
GCAACAAAACAACTCTTCTGCGATTGGAGACGAATCGCCAACCACGGTGA
AACTTCAGTTGGCCGATGAACTCTGTTGTGAAGCAAGGTTGGCGCAGACA
GAATCTCCAATGCTTGATCGGAAATTTTTGGATGGGTTTCGGTGTGTGTC
ACGGTGGACAAGTTGATATTTATACAAGTATTTCTCGTACACACCACGGC
GTTTTTAGGTTTGGACGAAACACGATGCCAGCCGTGTGTCACGCCCAGAA
CATGAGAATACATACTTTTCGAAGTTTAAATAAAAAATCTGTGCATGAAT
CGGGATCACATTCAATGGTCCAGACTGTTCGTTTCGACCAATCAGAAAAC
TGTGAACCACTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig201:213442..220053+

>mRNA_P-littoralis_Contig201.52.5 ID=mRNA_P-littoralis_Contig201.52.5|Name=mRNA_P-littoralis_Contig201.52.5|organism=Pylaiella littoralis U1_48|type=CDS|length=999bp|location=Sequence derived from alignment at P-littoralis_Contig201:213442..220053+ (Pylaiella littoralis U1_48)
ATGTTCAAGTTCGGTTTCTATCCGCCAGCAGAGGCGACGGAGGAGCAGCA
ACAACACCAACAACGACCCCCTTCTCCTCCGACTGCTGCTGATGCTGCTG
CTACCGACGACGCCCGTTTGGATGCCGCTGCCACTGCCGATCAAAATGCT
GCTTCGAGGGTCATTGAAGGTGCAGCGAGGACAGCAATACCAAGTGGAGT
AACAGCCCCGCCGGCGCAGGCACTGGCGTGGCAGTCTGGAGGCCTCACTC
TCGTACGAGCCGTCCCTTCCGCAAACGCTTGCCCGGAGGCCCCCCAGGAG
AGTGACCTCGTGCCAGGAGTCTACGAAGGAGGTCTCAAGGTTTGGGAGGC
CAGCCTTGACCTGGTGGACCACCTGGTGTCCTCCGGCGGCGATGGCAACG
GCGGCGTGTTCGCGGAAGATGAAGCTACGGTGGTTACTGGGCGACGAAAA
AGGGTGCTTGAGCTGGGTTGTGGGCACGGATTTCCGGGCATCGTGGCTCT
CCAACAAGGACTGCGTGTGTGCTTCTCGGATTTCAATCGCGAGGTGATCG
AACAGGTCACCATCCCGAACGTCAAGCTCAACGTGGAGGAGCGCTACTGG
CCCCTAGCGGAGTACTACAGCGGGGATTGGAACTCCCTGTCCCCTCTCCT
TGAAGAGAGGGACGGAGGCGAACTGTTTGACCTTATCTTGACGGCGGAGA
CCCTGTACACTACCGTGGTCGCCGACAAGGTGTTGGGCATGGTGTTGAAA
CACTTGTCGCCGGGAGGTCAGGCCCTGGTGGCCTCCAAGCGGTTCTACTT
CGGGACCGGAGGAAGCACTCAGTACTTCCGGGACAAGGCGGCAGCGACGG
GGCGCCTTGTCTGCCTCGACACGGGCGTCATTGACACCGGGAAGGGCAAC
ATCAGGGAGATTTTGAGGGTTTCCTGGAGAGACGAGGAGGCGGCAGCGCG
GGCGGGGGCCGTAGCGATTGCAGGGGATGGACGCAAGGCGTCGAGATAG
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