mRNA_P-littoralis_Contig201.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.130e-81 Identity = 134/177 (75.71%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 16 MFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQP----NSRNREAGTMVTHCVEVNRATYKGKLINNVFLDIRAKFPAAHTVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGV 534
MFLAAVARPR+DSSRNR FDGKIGIYPFTVQR AQ NSRNR AGT+VT VEVNR TYK KLINNV DIRAKFPA TVFAQQD+APGHRVM DPE+ AAA Q G RIELINQP NS D N+LDLGF NSI SLQ+RTTPT I++LVA VE AFWAQ +DRVWTTLQ V
Sbjct: 1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVSTVFAQQDSAPGHRVM-DPEIVAAAAQ-GRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSV 175
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 251 bits (641), Expect = 4.080e-77 Identity = 128/170 (75.29%), Postives = 140/170 (82.35%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVEVNRATYKGKLINNVFLDIRAKFPAAHTVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDR 510
+V K+MFLAAVARPRYDSSR+RQFDGKIGIYPFTVQR AQ N RN AGTMVTH VEVNR YK KL NNVF DIRAKFP++ +FAQQ+NAPGHR M DP+V AAAGQ GRIEL+NQPPNS D NILDLGF NSI SLQ+RTTPT + ELVA VE A WAQK +TL R
Sbjct: 92 HVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.080e-56 Identity = 110/264 (41.67%), Postives = 139/264 (52.65%), Query Frame = 1
Query: 16 MFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVEVNRATYKGKLINNVFLDIRAKFPAAH-----------------------------------------------------------------------TVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHL 594
MFLAAVARPRYD+SR F GK+GI+PFTVQRPAQ NSRNR AGTM T CVEV + +K K+++ V I+A++P T++ Q DN P HR+ ADP+V AA G I LINQP NS DTNILDLGF N++ SLQ+R TP ++E + V+ AF Q T D+VW +LQ +L+ I+LA+G+NTFKLPHL
Sbjct: 1 MFLAAVARPRYDTSRRCNFTGKLGIFPFTVQRPAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVIPAIKARWPGGRGRKTNRCCNFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ---IILAKGNNTFKLPHL 261
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3) HSP 1 Score: 176 bits (447), Expect = 7.790e-50 Identity = 99/201 (49.25%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCV-EVNRATYKGKLINNVFLDIRAKFPAAHT--VFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHL 594
++TK+MFLAAVARPRYDSS N F GKIGIYPFT PA+ +S+NR AGTM T + VN+ + LI V DIRAK+P HT +F QQDNA H + D E AA + G I L QPPNS D N+LDLGF +I SLQ + + +ELV AV+T+F ++Q L+ V+ TLQ ++E I+ +G N + +PH+
Sbjct: 206 FITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKE--IIKVQGGNNYHIPHI 404
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6A5ABP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABP8_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.400e-49 Identity = 96/201 (47.76%), Postives = 125/201 (62.19%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVEVNRATYKGKLINNVFLDIRAKFPAAHTV--FAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHLH 597
++ K+MFL AVARP YD +DGKIG++PF + PAQ S+NR GTMVT + V + Y+ L+N V L I+ +P V F QQDNA H + D EV A G R++L+ QP S D N+LDLGF NSI +LQ+R T I++LVAAV AF +TLD+ + TLQ V+EE + GDNT+KLPHLH
Sbjct: 24 HIIKVMFLTAVARPCYDHGSKTMWDGKIGMWPFVSEVPAQRKSKNRPRGTMVTAPITVTKPVYRDFLVNKVILRIKQVWPGRRDVPVFIQQDNARPHVQVDDLEVATAGTIGGWRVQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTCIDDLVAAVHAAFDELDFRTLDKTFMTLQKVMEES--LKVGGDNTYKLPHLH 222
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR) HSP 1 Score: 170 bits (430), Expect = 2.040e-48 Identity = 95/202 (47.03%), Postives = 131/202 (64.85%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCV-EVNRATYKGKLINNVFLDIRAKFPAAHTV---FAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHL 594
++ K+MFLAAVARPR+D SRN+ FDGKIGI+PF + PA+ NS+NR AGT+ T + V + Y+ LI+NV IRAK+P + + F QQDNA H D E AA + G I L QPPNS D N+LDLG+ +I SLQ++ P I+EL++AVE +F +++L+ V+ TLQ L E+M G N +K+PH+
Sbjct: 96 FIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQ--LCMLEVMKNCGGNNYKVPHI 295
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: UPI0009019CDE (uncharacterized protein LOC109159770 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009019CDE) HSP 1 Score: 169 bits (429), Expect = 2.950e-48 Identity = 97/214 (45.33%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVE-VNRATYKGKLINNVFLDIRAKFP--AAHTVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHLHNKLTASPATRPS 633
++TK+MFL AVARPR+D RN FDGKIG++PF + PA+ S+NREAGT+ T +E VN+ + LI+ V IRAK+P ++ T++ QQDNA H M D E AA + G I L QPPNS D N+LDLGF ++ SLQ++ P ++ELVAA AF ++L V+ TLQ L E+M G N +KLPH++ + A P+
Sbjct: 94 FITKVMFLCAVARPRFDLERNEMFDGKIGMFPFVYKEPAKRRSKNREAGTLETKPIESVNKEVTRKWLIDYVLPAIRAKWPPSSSKTIYIQQDNARPHISMNDVEFLEAAKKDGFDIHLTCQPPNSPDMNVLDLGFFRALQSLQHQEAPRNVDELVAATHKAFNEISVESLSNVFLTLQ--LCMVEVMKKFGGNNYKLPHINKQKLAREGLLPT 305
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR) HSP 1 Score: 170 bits (430), Expect = 3.130e-48 Identity = 95/202 (47.03%), Postives = 131/202 (64.85%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCV-EVNRATYKGKLINNVFLDIRAKFPAAHTV---FAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHL 594
++ K+MFLAAVARPR+D SRN+ FDGKIGI+PF + PA+ NS+NR AGT+ T + V + Y+ LI+NV IRAK+P + + F QQDNA H D E AA + G I L QPPNS D N+LDLG+ +I SLQ++ P I+EL++AVE +F +++L+ V+ TLQ L E+M G N +K+PH+
Sbjct: 113 FIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQ--LCMLEVMKNCGGNNYKVPHI 312
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A485KH19_9STRA (Aste57867_5528 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KH19_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.560e-48 Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 16 MFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVEVNRATYKGKLINNVFLDIRAKFPAA---HTVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDNTFKLPHLHNKLT 609
MFLAAVARPRYD++R R FDGKIGI+PF + P + S+NR GT+VT V V+ A Y ++N V I FP A + V QQDNA H+ + E + G G I ++NQPPNS D N+LDLGF NSI SLQ++ + I+EL++AVET+F+ + L + + TLQ V+E M G N +KLPHL T
Sbjct: 1 MFLAAVARPRYDANRKRIFDGKIGIWPFVEKSPVKRKSKNRAKGTLVTKSVSVDSAVYTDMILNKVVPAIIQTFPTAALKNGVKVQQDNASPHKAVTT-EFLQSQGVNG--IAMVNQPPNSPDYNVLDLGFFNSIQSLQHQKSNLNIDELISAVETSFYELPVEILSKTFITLQKVMELS--MEVHGSNNYKLPHLQKDST 196
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR) HSP 1 Score: 169 bits (428), Expect = 1.850e-47 Identity = 95/195 (48.72%), Postives = 123/195 (63.08%), Query Frame = 1
Query: 1 YVTKLMFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCVEVNRATY-KGKLINNVFLDIRAKFPAAH---TVFAQQDNAPGHRVMADPEVFAAAGQRGGRIELINQPPNSSDTNILDLGFLNSIHSLQNRTTPTKINELVAAVETAFWAQKTQTLDRVWTTLQGVLEEEEIMLARGDN 573
++ K+MF+AAVARPRYD+ R FDGKIGI+PF Q PAQ NS+NR GTM+T VE A + K +I+NV I++KFP A+ T++ QQDNA H D ++ A I+ QP NS D N+LDLGF NSI SLQ+ +P I+EL+ V+ AF + TLD V+TTLQ +E IMLA G N
Sbjct: 197 FIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMIIDNVIPAIKSKFPPAYKKKTIYVQQDNAKPHFSDNDADIVALGSADDWNIKFKAQPANSPDLNVLDLGFFNSIQSLQHEASPHTIDELINCVQDAFHQLEANTLDNVFTTLQACMES--IMLADGGN 389 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig201.48.1 >prot_P-littoralis_Contig201.48.1 ID=prot_P-littoralis_Contig201.48.1|Name=mRNA_P-littoralis_Contig201.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp MFLAAVARPRYDSSRNRQFDGKIGIYPFTVQRPAQPNSRNREAGTMVTHCback to top mRNA from alignment at P-littoralis_Contig201:192322..192954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig201.48.1 ID=mRNA_P-littoralis_Contig201.48.1|Name=mRNA_P-littoralis_Contig201.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig201:192322..192954+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig201:192322..192954+ >mRNA_P-littoralis_Contig201.48.1 ID=mRNA_P-littoralis_Contig201.48.1|Name=mRNA_P-littoralis_Contig201.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig201:192322..192954+ (Pylaiella littoralis U1_48)back to top |