mRNA_P-littoralis_Contig201.44.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig201.44.4
Unique NamemRNA_P-littoralis_Contig201.44.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI)

HSP 1 Score: 728 bits (1878), Expect = 4.000e-251
Identity = 405/576 (70.31%), Postives = 441/576 (76.56%), Query Frame = 2
Query:   80 VLPRDRRFCSVIPADRFRPPTST-----SS---------GFGRRRRRG--RSLATVYLGLGSNVGDRHANILKAYKGLCELGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLG------EAVLSAEEAGRAG-------SGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGA-VAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAIR 1717
            +LPR+ R   ++P    RP T+T     SS          FGRRR     RSLATVYLGLGSNVGDRHAN+L+A+KGL E G+VDA+S LYETPPMYV+DQPWFLNAACRL+T+L P  LLERLK LEAA+GR  +ARWGPRAVDVDIL+YDDLVL+ G+                    Q +RWL+IPHPRMHERPFVLLPL DI+PDL HP+LRST KELL GLG         LSA  AG  G       S G GGAERVLPMG  SNG T RLWPMEG RSRTYVMGILNATPDSFSDGG HY  G  VA AVE  L MARDGAD++DIGGESTRPGA EVS EEE+SRVVP+IEGIR A  A G  + G   EG D   +G V  TI+VDTRRAAVAEAAVAAGA+ VNDVSGGTFD +ML  VAR GVPL+MMHMRGTPQTMTSLTDY GNVVGEVS SLEACSRAADIAGVPRWMHVL+PGIGFAKTH QSLLLMRELDVI K VGSPLLVGPSRKRFIGELTSE DP +RDWGTVGACCS AERGA +VRVHNV+GA  ALAVSDAIR
Sbjct:   11 LLPRNGR---ILPGCPLRPSTTTRIHTASSVPSLRGSLLDFGRRRGGASVRSLATVYLGLGSNVGDRHANLLRAFKGLREFGEVDATSLLYETPPMYVEDQPWFLNAACRLSTDLGPAVLLERLKVLEAAVGRKDTARWGPRAVDVDILLYDDLVLDGGDXXXXXXXXXXXXXXXXXXXXQSKRWLRIPHPRMHERPFVLLPLADIQPDLAHPVLRSTVKELLSGLGLSAGVGNRTLSAAAAGAKGVEGQAGESAGAGGAERVLPMGVCSNGHT-RLWPMEGRRSRTYVMGILNATPDSFSDGGQHYRRGGGVATAVEHGLKMARDGADVLDIGGESTRPGAAEVSPEEEISRVVPVIEGIRDAATAGGEAAAG---EGDDADTIGPV--TITVDTRRAAVAEAAVAAGADAVNDVSGGTFDPQMLATVARTGVPLMMMHMRGTPQTMTSLTDYGGNVVGEVSQSLEACSRAADIAGVPRWMHVLNPGIGFAKTHSQSLLLMRELDVIAKHVGSPLLVGPSRKRFIGELTSESDPIQRDWGTVGACCSAAERGAKLVRVHNVKGAVLALAVSDAIR 577          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A6H5JQ34_9PHAE (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ34_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 3.180e-163
Identity = 287/419 (68.50%), Postives = 311/419 (74.22%), Query Frame = 2
Query:  542 QAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLG------EAVLSAEEAGRAG-------SGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYA-PGAVAVAVERALAMARDGADIVDIGGESTR-------PGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGD------NAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAIR 1717
            + P   +++QQ +RWL+IPHPRMHERPFVLLPL DIKPDL HP+LRST KELL GLG         LSA  AG  G       S G GGAERVLPMG  SNG T RLWPMEG RSRTYVMGILNATPDSFSDGG HY   G VA AVE AL M RDGAD++DIGGESTR       PGA EVS EEE+SRVVP+I+GIRAA  A G  + G   EG D       A +G V  TI+VDTRRAAVAEAA+AAGA+ VNDVSGGTFD  ML  VARAGVPLVMMHMRGTPQTMTSLTDY GN+VGEVS SLEACSRAADI+GVP                  SLLLMR+LDVI K VGSPLLVGPSRKRFIGELTSE DP +RDWGTVGACCS AERG  +VRVHNV+GA QALAV+DAIR
Sbjct:   15 ERPQQQQQKQQSKRWLRIPHPRMHERPFVLLPLADIKPDLAHPVLRSTVKELLSGLGLSAGVGNTTLSAAAAGAKGVEGQAGESAGAGGAERVLPMGVCSNGHT-RLWPMEGRRSRTYVMGILNATPDSFSDGGQHYRREGGVATAVEHALQMLRDGADMLDIGGESTRQAKRLALPGAAEVSPEEEISRVVPVIQGIRAAATAGGEAAAG---EGDDCXXXXXXATIGPV--TITVDTRRAAVAEAALAAGADAVNDVSGGTFDPRMLATVARAGVPLVMMHMRGTPQTMTSLTDYGGNIVGEVSYSLEACSRAADISGVP------------------SLLLMRQLDVIAKHVGSPLLVGPSRKRFIGELTSESDPVQRDWGTVGACCSAAERGVKLVRVHNVKGAVQALAVADAIR 409          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A835YYJ5_9STRA (Dihydropteroate synthase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ5_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 2.820e-137
Identity = 272/571 (47.64%), Postives = 327/571 (57.27%), Query Frame = 2
Query:  182 RSLATVYLGLGSNVGDRHANILKAYKGLCE--LGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLEN-GERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGG-AERVLPMGY---SSNGET-----------------SRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGSPLLVGPSRKRFIGELTSEPDPSR----------------------------RDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAIRGREARSM 1738
            R L T Y+ LGSNVGDRH N+L+AY+ L    +G V  +S LY+T P YV DQP FLNAA RL+T L P  LL  LK +E  IGRV   RWGPR VD+DIL+Y D+ LE+  E  R  +  +P +P        P   LQ+PHPRMHER FVL PL DI     HP L  + +E+L  +           R  +GG G    RVLP+G    SS G                   + LW M+G    T VMGILN TPDSFSDGG +Y  G V  AV  A AMA DGADI+DIGGESTRPGA +V    E+ RVVP++  +RAA                       V   ISVDTRRAAVA  AV AGA++VNDVSGG  D  ML  VA  GVP V MHMRGTP+TMT++TDY+ +VVG+V+ +L A S  A+ AGVPRW+ VLDPG+GFAKT PQS+ L+  L  +      PLLVGPSRKRF+G +                                    RDWGT GA C+ AERGA IVRVH+VRG   AL V DA+R  EA ++
Sbjct:   14 RQLCTAYIALGSNVGDRHGNLLRAYRELRSRGIGNVVTTSGLYQTKPQYVADQPMFLNAALRLDTSLPPALLLRALKDVERDIGRVEGQRWGPRVVDLDILLYGDVQLEDDSEPGRGADTAVPPSPDPPA---SPLSHLQVPHPRMHEREFVLRPLADIAATARHPALALSVEEMLSNV-----------RRAAGGXGDDVVRVLPLGPPRGSSGGXXXXXXXXXXXXXXXXXXDTPLWDMDGP---TRVMGILNVTPDSFSDGGRYYG-GGVEAAVAHARAMAADGADIIDIGGESTRPGADDVEEAIELERVVPVVAALRAAG----------------------VTTPISVDTRRAAVARGAVRAGADLVNDVSGGAHDGAMLAAVAELGVPYVAMHMRGTPKTMTAMTDYA-DVVGDVTQALSAASARAEAAGVPRWLQVLDPGLGFAKTAPQSVQLLAGLVRVAAATRCPLLVGPSRKRFVGAVAGGXXXXXXXXXXXXXXXXXXXXXXXXXGNALTLEDRDWGTAGAACAAAERGARIVRVHHVRGVKHALRVVDAVRVAEAAAL 543          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: D0N9I9_PHYIT (Folic acid synthesis protein fol1, putative n=16 Tax=Phytophthora TaxID=4783 RepID=D0N9I9_PHYIT)

HSP 1 Score: 380 bits (975), Expect = 3.360e-118
Identity = 229/510 (44.90%), Postives = 298/510 (58.43%), Query Frame = 2
Query:  191 ATVYLGLGSNVGDRHANILKAYKGLCE-LGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRV-GSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAI 1714
            A VY  LG+N+GD+ AN+  A   L + +G V+A+S LY T P YV+DQP FLN   RL T L+P  LL   KT+E  IGR  S RWGPR +DVDIL+YDDLVL+             + P            L +PH R+ ER FVL PL D+ PDL+HP+L+ + ++L +      L AEE            +R +P       + +  W +    S+T+VMGI+N TPDSFSDG         A AV++AL MAR G DI+DIGGES+RPGA  V+ +EE+SRV+P+I GIR                        +  ++IS+DT +A VA  A+ AGAN+VND+S G  D EML  VA+  VP+V+MHMRGTP+TMT L +Y  +VV EVSD L     AA+ AG+ RW  VLDPGIGFAK    +L L+R L  + +   G PLLVG SRK FIGE+   PDP  R WGT   CC+  E+G +I+RVH+         +SDAI
Sbjct:    5 ARVYAALGTNLGDKVANLENALAMLTQTVGPVEATSRLYTTAPQYVEDQPAFLNIVARLRTHLKPKELLGAFKTIEREIGRTPSLRWGPRLIDVDILLYDDLVLKTD---------TEEGP------------LIVPHERIAERDFVLAPLCDVAPDLMHPVLKQSMQQLYD-----TLQAEE------------QRYVPPVPMLPVDKNTPWSLG---SKTFVMGIVNVTPDSFSDGAELET---AAAAVQKALEMARAGVDIIDIGGESSRPGAESVTQDEELSRVLPVIRGIRE-----------------------KSKISISIDTTKAEVARQAIEAGANIVNDISAGLNDTEMLATVAKLRVPIVLMHMRGTPKTMTGLKEYE-DVVTEVSDVLNERVAAAEAAGIFRWNIVLDPGIGFAKARVLNLKLLRNLSTVKQTCHGLPLLVGSSRKGFIGEICGRPDPKDRAWGTAATCCAAIEQGVDILRVHDAAEMVDVAKMSDAI 446          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A3F2RHD0_9STRA (Pterin-binding domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHD0_9STRA)

HSP 1 Score: 363 bits (931), Expect = 9.120e-112
Identity = 224/510 (43.92%), Postives = 296/510 (58.04%), Query Frame = 2
Query:  191 ATVYLGLGSNVGDRHANILKAYKGLCE-LGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGS-PLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAI 1714
            A VY  LG+N+GD+ AN+ +A   L + +G V+A+S LY T P YV+DQP FLN   R+ TEL+P  LL   K +E  IGR  S RWGPR +DVDIL+YDDL L+                  +  ++ P   L +PH R+ ER FVL PL D+ PDL+HP+L+     L + L           +AG         V P+      +T+  WP+     +T+VMGI+N TPDSFSDG        V+ AV++AL M R G DIVDIGGES+RPGA  V+ EEE+ RV+P+I GIR  +                        + IS+DT +A+VA  AVAAGAN+VND+S G  D +ML  VA+  VP+V+MHMRGTP+TMT L +Y  ++V EV   L    + A+ AG+ RW  VLDPGIGFAK    +L L+R++  + K     PLLVG SRK FIGE+   PDP  R WGT   CC+  E+GA+I+RVH+         +SDAI
Sbjct:    5 ARVYAALGTNLGDKLANLEQALDLLTQFVGPVEATSRLYSTAPQYVEDQPAFLNLVARVKTELQPKELLRAFKAIEREIGRTPSLRWGPRLIDVDILLYDDLHLK------------------METEEGP---LIVPHERIAERDFVLAPLCDLAPDLLHPVLKLPMHRLYDNL-----------KAGE-----QRYVAPVPMLPVDKTAP-WPLG---KKTFVMGIVNVTPDSFSDGSDL---ATVSAAVQKALEMERAGVDIVDIGGESSRPGAEPVTEEEELRRVLPVIRGIREQS-----------------------KIAISIDTTKASVACQAVAAGANIVNDISAGLKDPKMLAAVAKLRVPIVLMHMRGTPKTMTGLKEYE-DIVTEVGSVLNERMQVAEAAGIFRWNIVLDPGIGFAKARVLNLQLLRKISSVKKTCHDLPLLVGSSRKGFIGEICGRPDPKDRAWGTAATCCAAIEQGADILRVHDGAEMVDVAKMSDAI 446          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A4D9D423_9STRA (Pterin-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D423_9STRA)

HSP 1 Score: 362 bits (928), Expect = 1.310e-110
Identity = 236/523 (45.12%), Postives = 302/523 (57.74%), Query Frame = 2
Query:  197 VYLGLGSNVGDRHANILKAYKGLCE--LGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSA-RWGPRAVDVDILMYDD--------LVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRT--YVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSL--TDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRV-GSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAIR 1717
            VY+GLGSN+G R  N+  A + L E  +G V + S LY++   YV +QP FLNA C++ T L P  LL+RLK +E  +GRV +A R+GPRAVD+DIL Y +         V   GER+   EG                  L +PH R+HER FVL PL ++ P L HPL  +   + + G  E   S   +            RVLP+ +   G+   L P++ +   T   VMGILNATPDSFSDGG     G V  AVERAL M   GA I+DIGGESTRPGA+EV  +EE+ RV+PIIEGIRA            +++           V +S+DTRRA +A+AAV AGA+V+NDVSGG FD EMLP VA   VP V+MH RGTPQTMT    T YS + VG+V   L    R A+  GV RW  ++DPGIGFAK    ++ L+R LD + + + G PLLVG SRKRFIG L  E    +RD GT         RGA ++RVHNV  A Q + ++D +R
Sbjct:   32 VYIGLGSNLGCRAKNLKLAVEALNEPTIGHVQSISGLYQSKAQYVIEQPDFLNAVCQIQTTLSPFGLLDRLKEIERRLGRVKAAQRFGPRAVDLDILYYHEDEDPSRIITVARQGERNGSDEGS-----------------LFVPHTRLHEREFVLRPLAELAPWLSHPLRENLTVQQMLGACEKSRSETSSPLV---------RVLPLRWQE-GDNMLLLPLDNKHRETPSLVMGILNATPDSFSDGGKD--GGCVNSAVERALGMRDQGATIIDIGGESTRPGASEVEEKEELGRVLPIIEGIRA------------QDKN----------VLLSIDTRRAMIAQAAVEAGADVINDVSGGAFDSEMLPAVAALNVPYVIMHTRGTPQTMTEAAHTAYSRDPVGDVVRELRRAVRRAERKGVRRWSMIVDPGIGFAKDLETNIALLRGLDRLNEEIAGLPLLVGASRKRFIGTLCGETQADKRDVGTSVVNAVAILRGAALLRVHNVAMARQTVRLADTLR 503          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A225VU83_9STRA (Folic acid synthesis protein fol1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VU83_9STRA)

HSP 1 Score: 358 bits (920), Expect = 3.670e-110
Identity = 222/510 (43.53%), Postives = 289/510 (56.67%), Query Frame = 2
Query:  191 ATVYLGLGSNVGDRHANILKAYKGLCEL-GKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRV-GSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAI 1714
            A VY  LG+N+GD+ AN+  A   L +L G V+A+S LY T P YV+DQP FLN   RL TEL+P  LL   KT+E  IGR  S RWGPR +DVDIL+YDDL L+             + P            L +PH R+ ER FVL PL D+ P L HP+L+   ++L + L E                 G +R +          +  W +    S+T VMGI+N TPDSFS+G        VA AV++AL M R G DI+DIGGES+RPGA  V+ +EE+ RV+P+I GIR                        +  V IS+DT +A VA  AV AGAN++ND+S G  D  ML   A+  VP+V+MHMRG+P+TMT L +Y  +VV EVSD L     AA+ AG+ RW  +LDPGIGFAK    +L L+R+L ++     G PLLVG SRK FIGE+   P+P  R WGT   CC+  E+GA+I+RVH+         +SDAI
Sbjct:    5 ARVYAALGTNLGDKVANLENALVMLTQLVGPVEATSRLYTTAPQYVEDQPAFLNLVARLQTELKPNELLGAFKTIEREIGRTPSLRWGPRLIDVDILLYDDLDLKMD---------TEEGP------------LIVPHERIAERDFVLAPLCDLAPTLEHPVLKQPMQKLYDNLKE-----------------GEQRYVAPVPMLPVHKNAPWSLG---SKTIVMGIVNVTPDSFSEGAGLEN---VATAVQKALDMERAGVDIIDIGGESSRPGAESVTEDEELKRVLPVIHGIRE-----------------------KSQVAISIDTTKAEVAHQAVEAGANIINDISAGVKDPHMLATAAKLRVPIVLMHMRGSPKTMTDLKEYE-DVVAEVSDVLNERVAAAEAAGIFRWNIILDPGIGFAKARVLNLQLLRKLAIVKHTCDGLPLLVGSSRKGFIGEICGRPEPKDRAWGTAATCCAAIEQGADILRVHDGAEMVDVAKMSDAI 446          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A7S1UFL4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFL4_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.250e-108
Identity = 240/516 (46.51%), Postives = 297/516 (57.56%), Query Frame = 2
Query:  197 VYLGLGSNVGDRHANILKAYKGLCELGKVDA--SSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSA-RWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHP-QSLLLMR---------ELDVIGKRVGSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVS 1705
             ++GLG+N+G+R A +    + L  +  V+   +S LYE+ PMYV+DQP FLNAA  L T L P AL   LK +E   GR  SA R GPR +D+D+L+Y   + ++          +P             R L++PH RMHER FVL PL D+ P +V P        L  GLG       E+GR     TG A  V P G    GE  RLW  +    RT+VMGILN TPDSFSDGG++     VA AVE AL +  DGAD+VDIGGESTRPGA EV    E+ R VP+IE +R  +                        V IS+DTR+AAVAEAA+AAGA++VNDVSGG FD  MLP VAR   P ++MHMRGTP TM +   Y G VV EV   + A   AA+ AGV  W  +LDPGIGFAK    Q+L L+R         EL     +V  PLLVG SRKRFIGELT E + ++RDWG+VGA  + +  GA +VRVHNV G  QAL VS
Sbjct:    6 AFVGLGANLGNRLAQLRAGVRALRGIEGVEVLRTSRLYESAPMYVEDQPRFLNAAVELKTALTPEALFVALKQVEEQSGRDFSAVRNGPRPLDLDLLLYGSEIFDSV---------LPDG-----------RPLRVPHARMHERAFVLRPLIDLDPGVVPP------NSL--GLGP------ESGRNPL--TGDAYPVFPAG----GE--RLWRTD---DRTHVMGILNVTPDSFSDGGSY--DSGVACAVEAALKLVEDGADVVDIGGESTRPGAAEVEVNREIERTVPVIEELRLQSD-----------------------VVISIDTRKAAVAEAAIAAGADIVNDVSGGAFDAAMLPTVARLEAPYILMHMRGTPDTMNAKAAYEGGVVEEVGSEMRAGVGAAEAAGVCSWDIMLDPGIGFAKKDAAQNLELLRRLRTFVECEELSYDPPQVPCPLLVGASRKRFIGELTGETEAAKRDWGSVGAALAASAGGAFMVRVHNVPGTKQALQVS 451          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: A0A8K1CG92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG92_PYTOL)

HSP 1 Score: 352 bits (902), Expect = 2.170e-107
Identity = 221/512 (43.16%), Postives = 286/512 (55.86%), Query Frame = 2
Query:  185 SLATVYLGLGSNVGDRHANILKAYKGLCE-LGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGS-PLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAI 1714
            +  T+Y  LG+N+GD+  N+  A   L E +G ++A+S LY T P YV+DQP F+N   RL+T L P ALLE  K +E  +GR  S RWGPRA+DVD+L Y    L                       +  E  L IPH R+ ER FVL+P  DI P+ VHP+     +EL+  L ++V +                 +LP+      +    W +    ++T+VMGILN TPDSFSDG          +AV+RAL M ++G DIVDIGGESTRPGA  VS EEE+ RVVP+I GIRA                       +  + IS+DT +AAVA AA+ AGANV+NDVS G  D EML   A   VPLV+MHMRGTPQTMT+L  Y  +VV EV+  L+    AA  AGV  W  V+DPGIGFAK    +L ++R L  + +R  S P+LVG SRK FIG++   PDP  R WGT   C +     A+I+RVH+V        +SDAI
Sbjct:    8 ACVTIYAALGTNLGDKVGNLETAVALLRERVGPIEATSRLYCTAPQYVEDQPVFVNIVVRLSTTLSPPALLEAFKAIERDVGRKQSFRWGPRAIDVDVLFYGTRALAT---------------------ETSEGPLVIPHERIAERDFVLVPFCDIAPEFVHPVHNKPMRELMHALQQSVAAYAP-----------PVPLLPV------DKQTPWQLG---TKTFVMGILNVTPDSFSDGADL---STAELAVQRALEMEQEGVDIVDIGGESTRPGAAPVSVEEELERVVPVIRGIRA-----------------------KSTIPISIDTTKAAVARAAIEAGANVINDVSAGEKDPEMLRTAAELKVPLVLMHMRGTPQTMTTLKQYE-DVVAEVAAYLQGRVLAATQAGVFSWNIVVDPGIGFAKDRELNLAVLRRLRELKQRCQSLPVLVGASRKGFIGQICGRPDPKDRAWGTAATCSAAIAEDADILRVHDVPAMVDVAKMSDAI 451          
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Match: M4BEQ3_HYAAE (Pterin-binding domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ3_HYAAE)

HSP 1 Score: 350 bits (899), Expect = 2.290e-107
Identity = 223/510 (43.73%), Postives = 289/510 (56.67%), Query Frame = 2
Query:  188 LATVYLGLGSNVGDRHANILKAYKGLCELGKVDASSFLYETPPMYVKDQPWFLNAACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLENGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIKPDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSSNGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERALAMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTGSTGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTFDQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSRAADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRV-GSPLLVGPSRKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAVSDAI 1714
            +A VY  LG+N+               E+G+++A+S LY T P YV+ QP FLN   R  T+L P  LL+  K++E  +GR  S RWGPR +DVDIL+YDDL L+                      Q  E  L IPH R+ ER FVL P+ D+ P+L+HP+ + + +EL + L           RA          +LP+  S+       W +   RS+T+VMGI+N TPDSFSDG       A   AV++AL MAR G +I+DIGGES+RPGA  V+ EEE+ RV+P+I GIR               E  D        V IS+DT +A VA  AV  GANVVND+S G  D  ML VVA+  VP+V+MHMRGTPQTMT L +Y  NVV EV+ +L A   AA+ AG+ RW  +LDPGIGFAK    +L L+REL    +   G PLLVG SRK FIGE+   P+P  R WGT   CC+  E+GA+I+RVH+         +SDAI
Sbjct:    1 MARVYAALGTNL---------------EVGRLEATSRLYTTAPQYVESQPVFLNLVARFQTDLSPKKLLQTFKSIEREVGRTPSLRWGPRLIDVDILLYDDLELKT---------------------QTGEGPLIIPHERIAERDFVLAPMCDLAPELIHPMHKMSMQELYDKL-----------RASEQRYVAPVSMLPVIKSAP------WSL---RSKTFVMGIVNVTPDSFSDGAELETATA---AVQKALEMARAGVNIIDIGGESSRPGAEHVTEEEELRRVLPVIRGIR---------------EKSD--------VAISIDTTKAEVARQAVNEGANVVNDISAGLNDDMMLAVVAKLRVPIVLMHMRGTPQTMTHLKEYD-NVVAEVAGALRARVAAAEAAGIFRWNIILDPGIGFAKGRVLNLKLLRELATFKQMCHGLPLLVGSSRKGFIGEICGRPEPKDRVWGTAATCCAAIEQGADILRVHDGAEMVDVAKMSDAI 427          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.44.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL2_ECTSI4.000e-25170.31Pterin-binding domain-containing protein n=1 Tax=E... [more]
A0A6H5JQ34_9PHAE3.180e-16368.50Pterin-binding domain-containing protein n=1 Tax=E... [more]
A0A835YYJ5_9STRA2.820e-13747.64Dihydropteroate synthase-like protein n=1 Tax=Trib... [more]
D0N9I9_PHYIT3.360e-11844.90Folic acid synthesis protein fol1, putative n=16 T... [more]
A0A3F2RHD0_9STRA9.120e-11243.92Pterin-binding domain-containing protein n=3 Tax=P... [more]
A0A4D9D423_9STRA1.310e-11045.12Pterin-binding domain-containing protein n=2 Tax=M... [more]
A0A225VU83_9STRA3.670e-11043.53Folic acid synthesis protein fol1 n=1 Tax=Phytopht... [more]
A0A7S1UFL4_9STRA1.250e-10846.51Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A8K1CG92_PYTOL2.170e-10743.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BEQ3_HYAAE2.290e-10743.73Pterin-binding domain-containing protein n=1 Tax=H... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig201contigP-littoralis_Contig201:182833..191047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRL2
Preferred nameFOL1
PFAMsFolB,HPPK,Pterin_bind
Model size3107
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017,RC00121,RC00721,RC00842,RC00943
KEGG koko:K13939,ko:K13941
KEGG ReactionR03066,R03067,R03503,R03504
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126,M00840
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003848,GO:0004150,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016772,GO:0016778,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019752,GO:0031967,GO:0031975,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons11
Evalue6.74e-259
EggNOG OGsCOG0294@1|root,KOG2544@2759|Eukaryota
EC2.5.1.15,2.7.6.3,4.1.2.25
Description2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
Cds size1752
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig201.44.4prot_P-littoralis_Contig201.44.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig201 184136..190995 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789987.7042208-UTR-P-littoralis_Contig201:182832..1841351680789987.7042208-UTR-P-littoralis_Contig201:182832..184135Pylaiella littoralis U1_48UTRP-littoralis_Contig201 182833..184135 -
1680789987.8570225-UTR-P-littoralis_Contig201:190995..1910471680789987.8570225-UTR-P-littoralis_Contig201:190995..191047Pylaiella littoralis U1_48UTRP-littoralis_Contig201 190996..191047 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789987.722012-CDS-P-littoralis_Contig201:184135..1843661680789987.722012-CDS-P-littoralis_Contig201:184135..184366Pylaiella littoralis U1_48CDSP-littoralis_Contig201 184136..184366 -
1680789987.7321723-CDS-P-littoralis_Contig201:185116..1852071680789987.7321723-CDS-P-littoralis_Contig201:185116..185207Pylaiella littoralis U1_48CDSP-littoralis_Contig201 185117..185207 -
1680789987.7459476-CDS-P-littoralis_Contig201:185539..1855931680789987.7459476-CDS-P-littoralis_Contig201:185539..185593Pylaiella littoralis U1_48CDSP-littoralis_Contig201 185540..185593 -
1680789987.7582874-CDS-P-littoralis_Contig201:185942..1860561680789987.7582874-CDS-P-littoralis_Contig201:185942..186056Pylaiella littoralis U1_48CDSP-littoralis_Contig201 185943..186056 -
1680789987.7693098-CDS-P-littoralis_Contig201:186547..1868561680789987.7693098-CDS-P-littoralis_Contig201:186547..186856Pylaiella littoralis U1_48CDSP-littoralis_Contig201 186548..186856 -
1680789987.7801197-CDS-P-littoralis_Contig201:187170..1873591680789987.7801197-CDS-P-littoralis_Contig201:187170..187359Pylaiella littoralis U1_48CDSP-littoralis_Contig201 187171..187359 -
1680789987.7964573-CDS-P-littoralis_Contig201:187868..1881411680789987.7964573-CDS-P-littoralis_Contig201:187868..188141Pylaiella littoralis U1_48CDSP-littoralis_Contig201 187869..188141 -
1680789987.8084376-CDS-P-littoralis_Contig201:188836..1889501680789987.8084376-CDS-P-littoralis_Contig201:188836..188950Pylaiella littoralis U1_48CDSP-littoralis_Contig201 188837..188950 -
1680789987.8195999-CDS-P-littoralis_Contig201:189371..1895291680789987.8195999-CDS-P-littoralis_Contig201:189371..189529Pylaiella littoralis U1_48CDSP-littoralis_Contig201 189372..189529 -
1680789987.8317926-CDS-P-littoralis_Contig201:190095..1902561680789987.8317926-CDS-P-littoralis_Contig201:190095..190256Pylaiella littoralis U1_48CDSP-littoralis_Contig201 190096..190256 -
1680789987.8461156-CDS-P-littoralis_Contig201:190937..1909951680789987.8461156-CDS-P-littoralis_Contig201:190937..190995Pylaiella littoralis U1_48CDSP-littoralis_Contig201 190938..190995 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig201.44.4

>prot_P-littoralis_Contig201.44.4 ID=prot_P-littoralis_Contig201.44.4|Name=mRNA_P-littoralis_Contig201.44.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=584bp
MSIIACCQRVLPRDRRFCSVIPADRFRPPTSTSSGFGRRRRRGRSLATVY
LGLGSNVGDRHANILKAYKGLCELGKVDASSFLYETPPMYVKDQPWFLNA
ACRLNTELEPVALLERLKTLEAAIGRVHSARWGPRAVDVDILMYDDLVLE
NGERDRKREGGIPQAPSDLRRQQQPERWLQIPHPRMHERPFVLLPLGDIK
PDLVHPLLRSTAKELLEGLGEAVLSAEEAGRAGSGGTGGAERVLPMGYSS
NGETSRLWPMEGERSRTYVMGILNATPDSFSDGGTHYAPGAVAVAVERAL
AMARDGADIVDIGGESTRPGATEVSAEEEMSRVVPIIEGIRAATGATGTG
STGAEEEGGDNAPVGRVAVTISVDTRRAAVAEAAVAAGANVVNDVSGGTF
DQEMLPVVARAGVPLVMMHMRGTPQTMTSLTDYSGNVVGEVSDSLEACSR
AADIAGVPRWMHVLDPGIGFAKTHPQSLLLMRELDVIGKRVGSPLLVGPS
RKRFIGELTSEPDPSRRDWGTVGACCSLAERGANIVRVHNVRGAAQALAV
SDAIRGREARSMSTHACCRRDGDESIMVSSSSS*
back to top

mRNA from alignment at P-littoralis_Contig201:182833..191047-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig201.44.4 ID=mRNA_P-littoralis_Contig201.44.4|Name=mRNA_P-littoralis_Contig201.44.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=8215bp|location=Sequence derived from alignment at P-littoralis_Contig201:182833..191047- (Pylaiella littoralis U1_48)
CCTCGTTAGCTGCAGCAGTGGTGCTCTACGCGGTGTACCTACCACAGTAG GCATGTCCATAATCGCTTGCTGCCAAAGGGTGCTACCTCGCGATAGAAGA TTTTGCTCCGGTGAGTCATGTCACCCCGCTGGTACCACGAGCAAAACTCG AGTACAGCAGTGCTCACCACGTTGATGTTTGCCCCATGCATCTCATAGGA GTAAAGACAGCTCCACAGATCCACCAAGAACCAAGATCCACCATCTGCAG CAGCGCTTGCTTTTTTTTGTACTACTCTACCGAGTTTTGTCGGACGTATA CAGAATTTGCGATCAACCTGGGTATTATACGACACTGCCTGTGACTACTC CGGCCGTTGCGGTACTGTAAGTGATGTATACCTCGCGCCGGTTTACAGAT CCCTGCCTTGTCGGACAGGAAAACAAAATTTTAAAAATTTGAAAGATACA CTATTTTACGTAGTCCCACGGTGTAGACTATGATACAGTACAACTTGGGG TGTACAAACATCTCGTGTTTCTGTCTATTGAGTTCTACGAGGCTTCAAGT GCTGCCACAAGATATTCTGTGTCGTTCTCTGGTAAAGGATCCACATTTTT CTTATTTTGTTTGGCCGAACCTCAACATACGGTACCCGCGCCTATTATAC TCCTGTGCCACAGAGGTTGTGGTATATCATGGTTCTGTCTTCTGTAGCCG ATCTACCAGTACCTTGCTCTCTCTCTCTCTGCCTCTTTGCAGACCTGGGT TCCTCTATTCGATTCAACCCCCCCCCCCTGCGTATCTCAAGTAATACCGG CAGACCGCTTTCGACCACCCACCTCTACATCGAGCGGCTTCGGCCGTCGA AGGAGGAGAGGGAGAAGTCTCGCCACCGTGTACCTCGGGCTCGGCAGCAA CGTCGGCGATAGGCACGCCAACATACTTAAGGCCTACAAGGGGCTATGCG AGGTGAAAATCCTCCTCTCCGCCGCAAAACGCTTTGTACTTAAGTCACTC CGTTGCGATATACTTGTGCATTTTGTGCGAATACCTTGGATTTTGCAAGG TCGAGGCATCCTTGTCTATGTCTAACCTTGCCAAGCCTTGCTTTCTTTTC CACCGGGTGGTAACAGTGTAACAGTACTGCGCTCGCGCTACAAGTGCACG TGGTGTGATGCCAAGTCAGGCAAAACCTTAAACAAGCCGAGCCTTAGTCA ATTCTATTCGGGAGTTTCGCTTGCCAACTCCATCGGCAGCAAGGGTAACA CTTCAAAAAAGTTGAGCTTCCGAAAGAACCTGTTTTGACCCTAAAGTAGT GTGTATGTTTTGGAATACGTTGCAAGGAATGTGTTTGCCCTGTCATGTGA TATGGAGAGCCCAACCCGTTTATCGGGAACCCCAAATTACAACGTTTCCC CTCGGCCTCAGACACGCACCATCATACATAATGTAAAACCCACCCCCCCA CCCGCTTCCTTCCGCGAACCCCCCCTCCCCCTCGGTAATCCATCCCACCG TGACCTTGATGCACGTAGCTGGGAAAAGTGGACGCTAGCTCGTTCTTGTA CGAGACGCCTCCCATGTATGTGAAAGACCAGCCTTGGTTTCTCAACGCGG CATGCCGCCTTAACACCGAACTTGAACCGGTCGCTTTGCTCGAACGTCTC AAGACCCTCGAGGCTGCAATAGGACGGTGAGGGGCGGGGGGTGGTGGTGC GAATGAGAATGTTTTCGCTTGCCGCTGTGAGCATCGAGCATTCCTTCCGA GGCAGGGCGCCGCTGTGTTCCCACTGCTTTCAAGGGCCGGTTCCCACGAG TTAGGCTCCTTGCGTTTGTTTTGTTGGGTTTGCTGCCAGGGGCGGAGTGC GAGAATCCAGAAGAAGGGGTTTGGCACGGCGGTCATGTTGGTGGTGAATG TCTACTGCGAAGTCCTCTGCGGCGAAGGTGTAGCCACGCTCTCCCGTGCC ACCACAAATGTGTTTTAGTTGTGCTCCAAATGTTTTCGTCGCTGAACAAA ATGCCAAGCTGTTGAATGTTCTAGGCCGTCAAGTTTTTCTTCTGCTGTTG GTCTTTTTGCCCCCCCCCCGCCCTGGTTGTTGGATGCACGTGGACAGAGT GCACAGCGCGCGGTGGGGGCCTCGAGCGGTGGATGTCGATATCCTCATGT ACGACGACCTCGTACTAGAGAACGGTGAGAGGGATAGAAAGAGGGAGGGA GGAATACCACAGTGGATGGAATTAAATGAATTGAAGCGGTATTGTTTAGC TCCCCGCTGCTTCTACTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTAGA TCTGCTGCTGTTGAGGAAGAAGTAGAAATGAATCACCGATGGCGGTAGTC GACCGCTTGCCCTGTGCTACCTAAAAACACGTGCCGCCACCGCCGCCGCC ACCGCCGTCGCTGCCGCCGCCGCCACCCCGCGATGCATTTCATATTTGGG GAATATCACACGTGCCACAGGGCGAGCAGTATACTCTGTTACAGCTACGC AGGAGACTTTCCACACTGTGTTCATGACAGCACAGCCCGACTCAAATTTG GGCTGGTTTCATCTTTCGCAGTCATAGGATAGTCATAGGATACGGCCGTG TGGCGGTGTGATGGGGAAGGAACGAGCTGTGTTTGGTTTTTGAAGGTTCG GTTGAAATGTTCACAAGCCTGCTGTGTTCCCCAAAGAGTTAGAGTCGTGA CAGGCGCGCTTCCATCCCTTAAAAGCTCCTCTATGTCGCTGGTCACTCAA CAAAATCCATACACGTACCACGAACCCCTTGACTCCCGAAAAGGCATTTA GGCGATATTTCCTCGCTTAACTAGACTCTTTCTCCTCTTGCATTGATGCG ATTCCCGTCAATATATTCCAAACCCAATCCGTGGATGAAAAAACAGGAAG AGAGAGGGCACCGAGCGATTTGCGACGGCAACAACAACCAGAGCGATGGC TGCAAATACCGCACCCCCGAATGCACGAGCGACCCTTCGTGCTGCTCCCT TTGGGGGACATCAAGCCGGATCTCGTCCACCCTCTGCTACGGTCGACGGC CAAGGAGCTCCTGGAAGGGTTAGGTGAAGCGGTGTTGTCGGCGGAGGAAG CGGGCCGTGCGGGGTCGGGAGGGACCGGGGGGGCTGAAAGGGTGCTACCA ATGGGTTATAGCAGCAATGGAGAAACGAGGTGGGTGGGTGGGTGGGCACT GGGTGCATTTGGCGAGGGTTGCCTTTTGGTTCTAATCGTGCGTAGTCATA GAAAACGCTGGACGATGCTGTCGCTTGTTTGTTTATTTTTCGCCTCGGCC AGCTCTTGTTTCTTTGCCAGCAGCAGTGTCGTGCGTCTTAGTAGGAGCGT TAGCTTCGCGAAGGCGTGATGTTTTTCGCTTCTGGGGTTGCCACTCGCTT GCTGTCGACGCCATTTGTTTTTTGGTGGCAGGACGACGCTGGTTGGTTGC TGTTGCGACCGCTCGTATCCTCTAGAATGCAAATATTGTCGGTAGCTGGT CGTTTACGAGCGACAACGCTCATCATTGAGAGGCATTGGATCTGTGAATC GCCGGGGACTCGGTCACCACCTTACTGTAGAGTAACTCATTTTGCGAATG ATTCAATCTCTGTCATTTTATCAACTGCAGCAGCAAAACGATCACAGAAC AAAAGCAACCATCCACTTTATTTCGCCTCAACTTTGAGCAGGTTGTGGCC CATGGAAGGGGAACGAAGTCGGACGTACGTGATGGGTATCCTTAACGCGA CACCGGATAGCTTCAGTGATGGTGGAACGCACTACGCGCCAGGGGCGGTT GCCGTAGCGGTGGAGCGTGCGCTTGCGATGGCGCGAGACGGGGCTGATAT CGTTGACATCGGTGGAGAGTCGACGAGGTACGTGGTTGTTGTTGCCGCTG CCGTTGCCGCTGCTATTGCCCTTGCTATTGAAGGCATGTTGCTGTTGTTT GTTTTGGTGGTGATGGTGCCGTTGCTTGAGTACGTTTAAGGCTGCGCTGG AGAGTGCCGCGTAACACCTCCTCAATCTCGGCGTACTTGCTGTGCCTTAG GCCTAGGCGGGCTTCTCCTGTGCCCAATGCAATTTCTGACCCTTTTACCT CCCTTTCCCTGGCGCCGAATGAAATAATACTTGTTCCCGGACACCTTACT GATCATTGGTGTAATATCTCTCGGACCATCGGCGATTCCAGACCGGGCGC CACCGAGGTGTCCGCAGAGGAAGAAATGTCTCGGGTCGTTCCCATCATCG AGGGCATACGCGCCGCCACCGGTGCCACTGGTACTGGTTCCACTGGTGCC GAGGAAGAAGGCGGCGACAACGCCCCCGTCGGGCGTGTCGCCGTGACCAT TAGCGTCGACACGCGTCGAGCCGCGGTGGCGGAGGCGGCGGTGGCGGCGG GGGCGAACGTGGTGAACGACGTGTCCGGCGGGACGTTTGACCAGGAAATG CTCCCCGTGGTGGCGCGGGCCGGGGTGCCTCTAGTGATGATGCACATGCG GTAAATAGGTTAGGGCTAGGGGCTGTAAGGAAGGAGGGTAAACGCGCGGG CGGATGTGGTACAAAGGAAAATGTTCGACGGAAGAATAGAGTATGCGAGA AGCGGTCATGTTTGCCTCGGCAACGTATGTTCGCGATTTACTTGCTGCTA GCGTTTCTCCCGTGGCTCGCGTACTTCTTTCATGTTGCGCTTGTTTCCCT CTCTGGTTTGGCTGTCTCCGTGTGTGTATCATATGTCTTGCCTGTTTGCC AGCCTTTTTTTGTGACTCTCCAGTTTCCCCGCTATTTCGTTTTATTTTTT CCCCTCTCCACGGCTCTCTCTAAACTTACCCCCTGTGCTACCTTTTGCCG ACCCCTCCCTCATCCGTACATGCTTTTTCTACCGACTGTCTCTTTCTTCT TAGAAAATATGTCTCTCTCCCTTCTTGCCCTGTTTTTCAGCTCTACCTTC CCCGCCTTGTATTTCGATTGCTTTTCTTTCATCTACACCAGCGGGACCCC GCAGACGATGACATCGCTGACGGACTACAGCGGCAACGTTGTGGGCGAGG TTTCCGATTCGTTGGAGGCGTGTAGCAGAGCGGCCGATATCGCGGGAGTG CCGAGGTGAGTCAAGAACGCCCTCTCGGCGACAAAAAAGTACGGATTTCG CTCTACAGGGTGCTCGTTTGACATTATCCAACCAAAAAGCACGAAGCATG AGGCAAACATAAACAGTGGCTATTCGGATTAGGCTGTTTTTGTGAGAAGG CGCGTGTTTGCTGGTCACATACAGCGGGTTACCAAGGGAAACCGTGTCGA TGTATGTCCAACATGAGGCATGCGTTCCGTAGGGAAACCGTGTCGATGTA TTTCCAACATGCTGCGCCAGCATATGCTGCTGAACTTCTTGTACTGGCTT GGCCGTTTCCCAGTTTCCCTCCGCTCGCGTATATCATACCTATAATATCC CCAGGTGGATGCACGTGCTTGACCCGGGTATAGGCTTTGCGAAGACGCAC CCACAAAGGTCAGTCGATCAGTCTTTGTCAGAACAAATTCATGGCAAGTA GGACACGAGTACAGCCCTGACTCTCCCCCAACTCGATCCGATCGTTTCAG CGTTTCTTGGCGTGCAAACTTCTTCTGCCGCGCGACGCTTGTGCTTTGCC CATCCCGTGCCTGCCACCAACCCAGTGGTGACTTCGCGTGGCGCTGCGCT CTGCTTTCAGTCTTTTTTTTTACAAGCGACCTCGCCCCGACTGCCCGCCC TCCCGAAAACTTGAAACGCTCGACACAACACGAACGCCTCTTTTTGTCGT CGCACACGCGGGGCCCCATAATATTCCCTGGCGACGGCAGTCTCCTGCTC ATGCGCGAGCTAGATGTCATTGGCAAGCGAGTGGGGAGCCCGCTGCTGGT GGGCCCCAGCCGAAAGCGGTTCATCGGAGAGGTGAGAGAAGCTTCATGCG AGGAAGTTTGAGAAAGGGGCACGGTTGTTATCGTGCTTTCGTCGTCGCTG TTTTTGGCCTCTGCAAGTATTTGCGAGTATTTCCGACGTGTGGTTTTCCG CATTCGGGTTGAAGATATGGTGAAAAACTGCTCATCGCGTTGTCGTTGGC GTCGGTTGCGAAGTAGTTTGACCGCAGCAGTGATCGCTTGACCCCGGATT TGCGGAAGGCAGGCAGGCAGGTCTACGAAACCACTCTTTTGTGGTACACC AGCCGGTCGCCCCGGTAGTTCAGGGTTTAGCCTCGAAGCCTACTCACAGC TATCATAGGTCGTGAGTTCGCATCCCGGGCGGGGTTTTCGCACTTGAAAC CTGGGAGTGGTCGCGGTTGCCTCAGGGACACTTGTCGCGATCGCGATTGA GGTCAAGACAAAAGTTCCGTACACGACAGGTGGAGAACAAAGAAAAGAGG AAAAACTCCCGTGTGGCCTCCCTTCTTCCTGTCTGTCGTGACCCCGGCTG GTGCGCCGAACTTCTACTACTGTACTGAGAAGGGTAGACTGCCGTCAAGA ATAAATGGGACGTCAACGCACGCACACACAAACGAACGCACACACCGACG GCCAACTTTCAGGACGACACGCACATGATTTTTGCATTCAGTGCCCCCAC CCATCACAAGCAGGTATGCCTACATACCTTCAAAATGGTGTTTTTATGTC CCATTCGTTATTTTACCTGCTGCTGCTGCAGTTGACGTCCGAACCAGACC CGAGTCGGCGGGATTGGGGAACGGTGGGGGCTTGCTGCTCGCTAGCCGAG CGCGGGGCGAACATAGTACGGGTGCACAATGTCAGGGGTGCGGCGCAGGC GCTCGCCGTCTCGGATGCGATACGAGGGAGAGAAGCAAGGTCGATGAGCA CGCATGCATGTTGTCGCCGTGATGGTGATGAATCGATCATGGTCAGCAGT TCATCATCATGATCATGCTGCTGTATGACGTCCCCGGCGTGAGCCGCGGC GTTCAACTACCAACATCTATCTATCATTTCGTAGCAAAACCCACGGTTTG CCAGTGACGAGACGTTTTTTTTGTAGTTTCGTCCAAACGATGCACTGTCT GACGCGTAAATATGATCGATGTTGGTAGTTGTTGTCTCGATGCACTGTTC GTGCAAGTGTTCGTTCCCCGCACTCATGTAGTGTACTGGGTGCAGTATGA CAGAGGCTGGGTGCTGACGTTTACGACGCGAGAAAAATCAAACATAATTT CAAATTAAAAATTAAAAAAAATTCCTTCGCTGAAGAAAAGGTCCCTATAC GGCGCACAGTAGCAGTGTGGTAAAACTCGACAGGTGCGCTGAATTGCTTT TTTTGATGCTGGTAGATGCATCTTATCCTCTGTGCTCGCTGCAGTATCTA TTCCAGACCCTCTTCTGGAGAGAGCCGAACACATTGACGTGTGTGTGTTT TTCAGAAAATCCCTCCTACGTACGGCAGCCGTGTGGTGGGTAAACTCAAC AGGGTACTCTGCGCTGTATTGCTTTTTTTGCTGCTGCATGCTGTGGGTAC ACAAAATAGAGGCTCATACGAGAAACAGACATACAATCGTGCGATAGGAG TGTGTGTGTGCGTGCGTGCGTGCGTGCGTGCCGTCTCGTGACACGTCTAC GGTGGTATATACAAGTACCTGGTAGTTCGTTCGAGATGCTGTAGTCCAGT GTTTTTTGAACCAGTCCGAGATTTTAAAAAATTGTTGTGCCGGCGCCGAC GGTAGCCCCTGATTGCTACCACCGTGGACTGAGCTACCACGTCCTTTGAA GTTTTCTTTTTGTGTTCTCTTTTTTTTTTTTTCTGCCCTTCTGCTTTTTT GCCCCCTGCACGCCTGCGTACTTGCGCTGCCTGAAACTGTTACTGGGCCG GTGAAGAGAGTAGCACGCCCGATGTCCATTTTATGGAGACTTTGGCAACT GAATTCGGTGTCTTTTTGTCTTTTTTGTCTTTTTTGTCACTCCTCCGTGC CTTTTTATTTTATTTTTGACTTTTTATTTCTTTTATTTCATCTTATGACT TGGCTCTGGACCAGGCTTCCTTTTCTTGTTTTCTTGTATCTTGTTCTATT TTTGTACAGCGTTGTGTGATTTCTCGGGGTCCGTTTTTGTTTTTTGCCGG AGTCTCCTTGTCATGCCTTTATTTGGTGGACTGAGGGGATCTCCCGAGTA CTATATACCTCTTCTGGGGCAAGCAGCCTGTGACCACGGAAATCGTACCT GATCGGTGGAGTACG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig201:182833..191047-

>mRNA_P-littoralis_Contig201.44.4 ID=mRNA_P-littoralis_Contig201.44.4|Name=mRNA_P-littoralis_Contig201.44.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1752bp|location=Sequence derived from alignment at P-littoralis_Contig201:182833..191047- (Pylaiella littoralis U1_48)
ATGTCCATAATCGCTTGCTGCCAAAGGGTGCTACCTCGCGATAGAAGATT
TTGCTCCGTAATACCGGCAGACCGCTTTCGACCACCCACCTCTACATCGA
GCGGCTTCGGCCGTCGAAGGAGGAGAGGGAGAAGTCTCGCCACCGTGTAC
CTCGGGCTCGGCAGCAACGTCGGCGATAGGCACGCCAACATACTTAAGGC
CTACAAGGGGCTATGCGAGCTGGGAAAAGTGGACGCTAGCTCGTTCTTGT
ACGAGACGCCTCCCATGTATGTGAAAGACCAGCCTTGGTTTCTCAACGCG
GCATGCCGCCTTAACACCGAACTTGAACCGGTCGCTTTGCTCGAACGTCT
CAAGACCCTCGAGGCTGCAATAGGACGAGTGCACAGCGCGCGGTGGGGGC
CTCGAGCGGTGGATGTCGATATCCTCATGTACGACGACCTCGTACTAGAG
AACGGTGAGAGGGATAGAAAGAGGGAGGGAGGAATACCACAGGCACCGAG
CGATTTGCGACGGCAACAACAACCAGAGCGATGGCTGCAAATACCGCACC
CCCGAATGCACGAGCGACCCTTCGTGCTGCTCCCTTTGGGGGACATCAAG
CCGGATCTCGTCCACCCTCTGCTACGGTCGACGGCCAAGGAGCTCCTGGA
AGGGTTAGGTGAAGCGGTGTTGTCGGCGGAGGAAGCGGGCCGTGCGGGGT
CGGGAGGGACCGGGGGGGCTGAAAGGGTGCTACCAATGGGTTATAGCAGC
AATGGAGAAACGAGCAGGTTGTGGCCCATGGAAGGGGAACGAAGTCGGAC
GTACGTGATGGGTATCCTTAACGCGACACCGGATAGCTTCAGTGATGGTG
GAACGCACTACGCGCCAGGGGCGGTTGCCGTAGCGGTGGAGCGTGCGCTT
GCGATGGCGCGAGACGGGGCTGATATCGTTGACATCGGTGGAGAGTCGAC
GAGACCGGGCGCCACCGAGGTGTCCGCAGAGGAAGAAATGTCTCGGGTCG
TTCCCATCATCGAGGGCATACGCGCCGCCACCGGTGCCACTGGTACTGGT
TCCACTGGTGCCGAGGAAGAAGGCGGCGACAACGCCCCCGTCGGGCGTGT
CGCCGTGACCATTAGCGTCGACACGCGTCGAGCCGCGGTGGCGGAGGCGG
CGGTGGCGGCGGGGGCGAACGTGGTGAACGACGTGTCCGGCGGGACGTTT
GACCAGGAAATGCTCCCCGTGGTGGCGCGGGCCGGGGTGCCTCTAGTGAT
GATGCACATGCGCGGGACCCCGCAGACGATGACATCGCTGACGGACTACA
GCGGCAACGTTGTGGGCGAGGTTTCCGATTCGTTGGAGGCGTGTAGCAGA
GCGGCCGATATCGCGGGAGTGCCGAGGTGGATGCACGTGCTTGACCCGGG
TATAGGCTTTGCGAAGACGCACCCACAAAGTCTCCTGCTCATGCGCGAGC
TAGATGTCATTGGCAAGCGAGTGGGGAGCCCGCTGCTGGTGGGCCCCAGC
CGAAAGCGGTTCATCGGAGAGTTGACGTCCGAACCAGACCCGAGTCGGCG
GGATTGGGGAACGGTGGGGGCTTGCTGCTCGCTAGCCGAGCGCGGGGCGA
ACATAGTACGGGTGCACAATGTCAGGGGTGCGGCGCAGGCGCTCGCCGTC
TCGGATGCGATACGAGGGAGAGAAGCAAGGTCGATGAGCACGCATGCATG
TTGTCGCCGTGATGGTGATGAATCGATCATGGTCAGCAGTTCATCATCAT
GA
back to top