mRNA_P-littoralis_Contig200.89.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig200.89.1
Unique NamemRNA_P-littoralis_Contig200.89.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: D7FPF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPF5_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 1.230e-187
Identity = 279/399 (69.92%), Postives = 309/399 (77.44%), Query Frame = 1
Query:  139 LMQQHRTVSEPAGLRRLLRRDHNRRTNKTGGIPAAPPAGILHSMSTMDSHDLEVGGSNGAGDSAT----RKALPKITRLTGVVLLEALAILGLLATLVRVRARCATAFADDWMGLSHENRAIHTGPRAMFVGSRASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPGGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPWSPVDADAGGAGEGLGVRERL 1323
            + +QH+ V+ P GLRRLLR +   +TN T      P      S+      DLE GG++ A    T    R  +P++T    VVLL+A AILGLL +L   R RC TA A +         + H GPR +FV S+AS+ELTHLIMVPCHGVTVTESLEGADSRD DWFLLDYQKGKDVPRALVGHIQGGLD L+AD+N+LLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITG YPTKIT++GFDFKE+RFE LH P+LRFPPEAFRYVG HP GRFDHAAAAEGER SALEPYR DPYGCA GG L  KR  RDPFHRTPPYS+VCPEMSELL +C TELF+GDLPWSP   +  G  EG GVRERL
Sbjct:    1 MQRQHQRVAAPEGLRRLLRNEG--KTNMTYSRRVEPMYASKPSLV-----DLEAGGTDLANSKTTAALCRPTMPRLTLAAIVVLLQAAAILGLLVSLALTRDRCRTAAATE---------SFHVGPRVVFVDSQASKELTHLIMVPCHGVTVTESLEGADSRDGDWFLLDYQKGKDVPRALVGHIQGGLDALDADENALLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITGDYPTKITVVGFDFKEDRFEHLHMPSLRFPPEAFRYVGLHPEGRFDHAAAAEGERTSALEPYRSDPYGCAVGGTLVQKRHARDPFHRTPPYSMVCPEMSELLGWCETELFTGDLPWSPASEE--GTEEGSGVRERL 381          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A835Z903_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z903_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.140e-89
Identity = 145/266 (54.51%), Postives = 183/266 (68.80%), Query Frame = 1
Query:  514 FVGSRASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHP-GGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPWSPVDADAGGAGEGLG 1308
            FV + A+R LTHLIMVP H +T+ + L  A   D  W LLDYQ+  DV    V HIQGG+    AD  +LLLFSGG+TR  AGPKSEG SYF VA+   WWG+P +R RA++E+FARDSFEN+LFS+ RF+EITG YP KITI+G+DFK +R+   HA ALR+P  A  Y+G  P G RFD A A  GE   A  P++ DPYGC +   LA+KR++R+P+ R PPY L  PEM+ELL +CG  +++G LPW P  A+ GG  EG G
Sbjct:   43 FVRAGAARLLTHLIMVPGHAITMGDGLAAAPETDEAWHLLDYQREHDVGITFVDHIQGGVTLAAADTAALLLFSGGQTRADAGPKSEGFSYFAVAEANSWWGQPQVRGRAASEEFARDSFENLLFSVARFREITGHYPEKITIVGYDFKRDRYVNQHAAALRYPARAVSYLGIAPRGARFDTAGATAGEAAHAALPFKTDPYGCGSP-VLADKRRDRNPYAREPPYPLTAPEMAELLRWCGPGIYAGALPWDPPAAE-GGKEEGAG 306          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: F0YCD0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCD0_AURAN)

HSP 1 Score: 270 bits (690), Expect = 3.500e-82
Identity = 127/243 (52.26%), Postives = 167/243 (68.72%), Query Frame = 1
Query:  541 LTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRY--VGQHPGGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPW 1263
            L  L++V  H VT+ ESLEG +  DA W+LL YQ+G+D+PR  V H + G +      ++LL+FSGG+TR  AGP+SE +SY+ +A+H+ WWG P + ARA+TE++ARDS+EN+LFSICRF+E+ G YP  + ++ FDFKE RF  LHAPA+RFP +AF +  V    G RFD AAAAEGE  +A   +  DPYGC   G L  KR+ RDPFHR  PY  VCPE+  LL +CG  L+   LPW
Sbjct:    1 LRRLVVVAGHAVTMAESLEGVEENDASWYLLGYQRGRDLPREFVKHARRGAELAAGRDDALLVFSGGQTRRDAGPRSEAQSYWLLAEHFGWWGLPGVAARATTEEYARDSYENLLFSICRFREVAGDYPEAVDVVSFDFKERRFVDLHAPAIRFPKDAFHFEAVPVDGGSRFDGAAAAEGEAAAAAA-FEEDPYGC--DGELHAKRRSRDPFHRGVPYGTVCPELGGLLAHCGDRLYQEALPW 240          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: W7TH32_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH32_9STRA)

HSP 1 Score: 266 bits (679), Expect = 9.220e-79
Identity = 133/282 (47.16%), Postives = 180/282 (63.83%), Query Frame = 1
Query:  463 MGLSHENRAIHTGPRAMFVGS---------RASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKP----DLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHP--GGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPW 1263
            +GLS   R      R+ + GS         R +  L HLIMV  H VT++ESLEGA++ DA W+LL YQ+ +D+P   V HI+ G++  + D  SLL+FSGG+TR  AGP+SEG SY+ VA+H+ WW       D++ RA TED+A DS EN+L+SICRFKE T  YPT+I+++ F FK++RF   H  ALRFP   F +VG  P  GG+FDH  A +GE   A++ +  DPYGC +   L  K  ER+PF RT PY+  CPE++ LLEYC + ++   LPW
Sbjct:   87 LGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSK-KLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPW 367          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A7S2HNT6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HNT6_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.250e-78
Identity = 144/328 (43.90%), Postives = 190/328 (57.93%), Query Frame = 1
Query:  349 KITRLTGVVLLEALAILGLLATLVRVRARCATAFADDWMGLSHENRAIHTGPRAM-FVGSRASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWW----------------GKPDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHP--GGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPWSPVD 1275
            K T +   +++  +++L ++     ++A   TA  +    L   ++     P A  F     + +  HLI+V  H V V  +LE A   +  WFLLDYQK   +P+A+V HI+ G+ E   D  SLL+FSGG+TR   GP +EG SYF VAD  D W                G+  +RAR  TE+FA DSFEN +FSICRFKEITGSYP KIT++ F FK  RF+ LHA AL +P   F YVG  P     FD A +  GE  +A +P+  DPYGC +   L  KR+ER+PF RTPPY L CP+MS LL+YCG ELF  +LPW  +D
Sbjct:   18 KQTNMIKYLIIILISVLAVVLLFYNIQAAANTAVLESDKSLRGTHKKSWVSPNAQAFNEHLEATQTNHLIIVAGHSVIVAGNLEDAAYDENVWFLLDYQKSVGMPQAIVSHIRAGIAEAAKDPKSLLIFSGGETRASTGPVTEGSSYFRVADALDLWQGENINDVPLVGRLADGRTTVRARTITEEFATDSFENFMFSICRFKEITGSYPQKITVVSFTFKRRRFQQLHAKALHWPLNRFSYVGIDPLPSTGFDLAKSKAGEVQNAAKPFESDPYGCHSP-ILQQKRKERNPFSRTPPYKLSCPDMSRLLDYCGPELFPSELPWDYLD 344          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A1E7EWA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWA2_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.030e-77
Identity = 127/245 (51.84%), Postives = 165/245 (67.35%), Query Frame = 1
Query:  547 HLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKPD---LRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPGGR--FDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDL-PW 1263
            +L+MV  H VTV+  L+ A S ++DWFLL YQKG+ +P+A+  HI  G++E   D  SLL+FSGG+TR  +GP++E ++Y+ VAD  + W   D   +RAR +TE+FA DSFEN++FSICRF+EITG YP KIT++ F FK  RFE LHAPALR+P + F Y+G  P     FD   + EGE  +A  P+  DPYGC     L  KR  R+PF RTPPY L CPEM ELL++CG E  S  L PW
Sbjct:    1 NLVMVAGHSVTVSGHLQDAGSDESDWFLLGYQKGQGLPQAIHAHITAGIEEARKDPKSLLVFSGGETRAISGPQTEAQAYYHVADAMNLWLTNDGSSVRARTTTEEFATDSFENLMFSICRFREITGEYPKKITVVSFSFKRRRFETLHAPALRWPADRFAYIGVDPPASTGFDLQRSTEGESKNAAAPFAQDPYGCHTA-VLQEKRNSRNPFQRTPPYGLSCPEMKELLQFCGPEFISVQLIPW 244          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A448Z0J1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0J1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.590e-76
Identity = 126/242 (52.07%), Postives = 161/242 (66.53%), Query Frame = 1
Query:  556 MVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGKP---DLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPGGR--FDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGD-LPW 1263
            MV  H VTV++ L  ADS + DWFLL YQKG+ +P+A+  HI  G++E   D  +LL+FSGG+TR  +GP +E ++Y+ VAD  + W       +RAR +TE+FA DSFEN +FSI RF+E+TG+YP KIT + F FK  RFE LHAPALR+P E F YVG  P     FD   +AEGER +A  P+  DPYGC +   L  KR+ R+PF RTPPY L CP+M  LL YCG EL   D +PW
Sbjct:    1 MVAGHSVTVSDHLRDADSDEKDWFLLSYQKGRGLPQAIHAHIAAGIEEARKDPEALLVFSGGETRASSGPHTEAQAYYHVADSMNLWPSDPGSSVRARTTTEEFATDSFENFMFSIARFREVTGTYPKKITAVSFSFKRRRFETLHAPALRWPSERFVYVGVDPPASTGFDLEQSAEGERKNAAAPFEQDPYGCHSE-VLQEKRKSRNPFKRTPPYPLSCPDMKYLLGYCGPELVPSDRVPW 241          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A1Z5JCQ7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCQ7_FISSO)

HSP 1 Score: 256 bits (653), Expect = 1.520e-75
Identity = 136/302 (45.03%), Postives = 190/302 (62.91%), Query Frame = 1
Query:  394 ILGLLATLVRVRARCATAFAD------DWMGLSHENRA--IHTGPRAMFVGSRASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWW-GKPDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPGGR--FDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGD-LPW 1263
            I G L T++   A   T +A        W+GL    R   I    +    G  AS    +LI+V  H VT++  LE A+  + DWFLLDYQ+ + +P A+VGHI+ G+   + D  SLL+FSGG+TR   GP++EG SY+ V D    W  +  +RAR  TEDFA DSFEN++FSICRF+E+TGSYP  IT++ F FK+ RF+ +HA ALR+PP  F+Y+G  P     F    A +GE  ++++P++ DPYGC +   L  KR++R+PF RTPPY+L CPEMS+LL +CG++L   D +PW
Sbjct:   23 IFGSLLTILAFVAYTTTIWAPMVAQDHAWVGLRTIQRKKWISNSAQPFNTGGLAS-SAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLWPSQSTVRARTITEDFATDSFENLMFSICRFREVTGSYPDTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPSASTGFVLEEAMKGELENSVKPFQSDPYGCHSK-ILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A2R5GD88_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GD88_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.640e-75
Identity = 128/278 (46.04%), Postives = 175/278 (62.95%), Query Frame = 1
Query:  451 ADDWMGLSHENRAIHTGPRAMFVGSRASRELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGK---PDLRARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPGGRFDHAAAAE---GERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFS-GDLPW 1263
            ADD++   H                 A+R   +LI+V CH +TV ESLEG D RD  W L+DYQK   +P+A  GHI+ G++    D ++L++FSGG+TR  AGPKSE  SYFFVADH+ WW      ++R RA+ E+++ DS EN+LFS+CRF E++GSYP  +T++G+ FK+ERF  LH  ALR+P E+FRYVG  P      A   +    E  ++L P+R DPYGC +   L  KR +R+PF R P + L CPE+S LL YC  +L+  G+LPW
Sbjct:   29 ADDFVVQRHGVSVRSPSAELAPFDRTAARSARNLILVACHSITVGESLEGVDVRDDRWMLVDYQKHASMPQAFTGHIRKGIELALEDPHALVIFSGGQTRLHAGPKSEANSYFFVADHFGWWSSRAAKEVRPRAALEEYSTDSLENLLFSLCRFHELSGSYPKHVTVVGYTFKQERFRDLHRAALRYPLESFRYVGVDPDTNAFRARLPQLEFFESTASLAPFREDPYGCHSE-VLRTKRVDRNPFSRQPGFILSCPEISTLLRYCERKLYPVGELPW 305          
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Match: A0A812GAR4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812GAR4_9DINO)

HSP 1 Score: 255 bits (652), Expect = 6.190e-75
Identity = 126/265 (47.55%), Postives = 173/265 (65.28%), Query Frame = 1
Query:  538 ELTHLIMVPCHGVTVTESLEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGGKTRGPAGPKSEGESYFFVADHYDWWG----KPDL-----------------RARASTEDFARDSFENVLFSICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHP--GGRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYSLVCPEMSELLEYCGTELFSGDLPW 1263
            +L+HL+MV  H V + +SLE    +++DWFL  YQ+G+D+P+ALV HI+ G++    D  +LL+FSGG+TR  AGP++EG SY+ VA+++DWWG    +PDL                   RA TE+FA DSF+NVLFS+CRFKE+ G YP ++TI+ F FK++RF  LH  ALRFP   F Y+G  P  G RFD   A  GE  +A + ++ DPYGC +   L  KR+ R+PF RT PY L CPE+  LL++CG ++F G LPW
Sbjct:   59 QLSHLVMVAGHAVVMADSLEHIVHKESDWFLEAYQRGQDLPQALVSHIKAGVEAAALDPRALLIFSGGQTRAAAGPRNEGWSYYRVAEYFDWWGYSANRPDLLREAQQRTQRTSTYLPVAQRAVTEEFALDSFQNVLFSLCRFKEVVGRYPDRVTIVSFTFKKQRFSELHRGALRFPSARFSYIGIQPPPGSRFDLVKAESGEHEAA-KLFQSDPYGCHSQ-TLVEKRRARNPFQRTTPYLLSCPELKALLQWCGPDIFRGALPW 321          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF5_ECTSI1.230e-18769.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z903_9STRA2.140e-8954.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YCD0_AURAN3.500e-8252.26Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TH32_9STRA9.220e-7947.16Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2HNT6_9STRA2.250e-7843.90Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7EWA2_9STRA1.030e-7751.84Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A448Z0J1_9STRA8.590e-7652.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JCQ7_FISSO1.520e-7545.03Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A2R5GD88_9STRA1.640e-7546.04Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A812GAR4_9DINO6.190e-7547.55Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:280118..285258 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPF5
PFAMsDUF218
Model size2170
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00162
KEGG koko:K20457
KEGG ReactionR02237
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons4
Evalue1.11e-193
EggNOG OGsKOG4533@1|root,KOG4533@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_004730.1
EC6.3.2.12
Cds size1185
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.89.1prot_P-littoralis_Contig200.89.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig200 280259..284414 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789983.8217552-UTR-P-littoralis_Contig200:280117..2802581680789983.8217552-UTR-P-littoralis_Contig200:280117..280258Pylaiella littoralis U1_48UTRP-littoralis_Contig200 280118..280258 +
1680789983.8778825-UTR-P-littoralis_Contig200:284414..2852581680789983.8778825-UTR-P-littoralis_Contig200:284414..285258Pylaiella littoralis U1_48UTRP-littoralis_Contig200 284415..285258 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789983.8378925-CDS-P-littoralis_Contig200:280258..2805841680789983.8378925-CDS-P-littoralis_Contig200:280258..280584Pylaiella littoralis U1_48CDSP-littoralis_Contig200 280259..280584 +
1680789983.848241-CDS-P-littoralis_Contig200:282422..2826911680789983.848241-CDS-P-littoralis_Contig200:282422..282691Pylaiella littoralis U1_48CDSP-littoralis_Contig200 282423..282691 +
1680789983.8570387-CDS-P-littoralis_Contig200:283456..2836191680789983.8570387-CDS-P-littoralis_Contig200:283456..283619Pylaiella littoralis U1_48CDSP-littoralis_Contig200 283457..283619 +
1680789983.8662438-CDS-P-littoralis_Contig200:283987..2844141680789983.8662438-CDS-P-littoralis_Contig200:283987..284414Pylaiella littoralis U1_48CDSP-littoralis_Contig200 283988..284414 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig200.89.1

>prot_P-littoralis_Contig200.89.1 ID=prot_P-littoralis_Contig200.89.1|Name=mRNA_P-littoralis_Contig200.89.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=395bp
MQQHRTVSEPAGLRRLLRRDHNRRTNKTGGIPAAPPAGILHSMSTMDSHD
LEVGGSNGAGDSATRKALPKITRLTGVVLLEALAILGLLATLVRVRARCA
TAFADDWMGLSHENRAIHTGPRAMFVGSRASRELTHLIMVPCHGVTVTES
LEGADSRDADWFLLDYQKGKDVPRALVGHIQGGLDELEADKNSLLLFSGG
KTRGPAGPKSEGESYFFVADHYDWWGKPDLRARASTEDFARDSFENVLFS
ICRFKEITGSYPTKITIIGFDFKEERFEGLHAPALRFPPEAFRYVGQHPG
GRFDHAAAAEGERVSALEPYRLDPYGCAAGGALANKRQERDPFHRTPPYS
LVCPEMSELLEYCGTELFSGDLPWSPVDADAGGAGEGLGVRERL*
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mRNA from alignment at P-littoralis_Contig200:280118..285258+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig200.89.1 ID=mRNA_P-littoralis_Contig200.89.1|Name=mRNA_P-littoralis_Contig200.89.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5141bp|location=Sequence derived from alignment at P-littoralis_Contig200:280118..285258+ (Pylaiella littoralis U1_48)
TCCATCTTTACATCCTGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGTG AGGGGAGAGGCCCGCCCGGGAAGAGAAAGGCTGTACATGCCGTTGTCGGT ACAGACGACAACACCAGCTTTCCCGGGCAATAATCTTCTTGATGCAGCAG CACCGGACGGTTTCTGAACCAGCAGGGTTGCGACGCCTCCTTCGGAGAGA TCATAACAGACGAACGAATAAGACGGGCGGCATACCTGCTGCGCCGCCCG CTGGGATACTCCACTCTATGTCTACAATGGATAGTCATGACCTAGAGGTT GGCGGTAGCAACGGCGCTGGGGACAGCGCGACCCGGAAGGCCTTGCCGAA AATCACACGATTGACGGGCGTTGTTCTCTTGGAGGCATTGGCGATACTGG GACTGTTAGCCACGCTGGTTCGCGTTAGAGCTCGATGCGCCACAGCCTTT GCTGATGATTGGATGGGGTGAGTGTTTTTTGTTTGCGGTGACGATGTCAA CTGCGGATAACACCAGCAAGGAGTCTTAGTCTGTGTTATGTGTGATGGTT CCTTCCTTGGGCATCACTTGCTACACTAGAAACTGCTAGTGTTACAAGAG TTATAGGTGCGGTTGTGTAACAATCCGGAACGACCGCACTATATCGGGAC ACCGCATTGTATGATTTCAGGCTCTGTACAGCACTATGTCGGGATCAAAG CCGCCCGTTCTAGTGCGTACTGCTGTGCATTACTGGTGTTTGAGGTGTGT GGCGTATGATATGTGGTTTGTGTGCGAGAGAAAAACGAGAACCTGTTGTG GTTGGTCCTAGTTTAGTGCGGTCGCACCGCACCAAATGGGTCCTTTTTGG TCCATATGTAGTGCGGTCCATGCACTAAATAGGACCAAAGTCGTGACAAG ACATTTTGACCGAACGATATCGAGGCCCCGCACTATCGGGACCGCACTAT ATTGGGACCCCCATTTGTACGTACAGCATTGTCGATTGCCCTGTGACCAG TGGAGATCGTTTTCTATCTTTCAGTTTGTCTGGTATCTGACAACATACAG GTATGATATCAGTTTCACAGCAGTTTCGCAGAATCAAGCCAGAGTCACGT AGAGAAAATTATCCCCATGAGACCCCACGCCCCTTCTGCTGTACATACCG TGAAAAGACCGGGGCGAACGCCTCCCGTCTACAATGGCAAACACCCCGGG GCTGTAGCACGAAATTTTTTCAAAATCTGGAGCGAACGCCCCGGGGCGGC TCATTCCTTTTTGTTTTCGGTAAAAGCCCCGGGCAAGTAGCCAACGCCCC TGCGGGCGTTCTTGTTCGGGGGGCTGGAACATCCCGGGGGACGGGCAGAA GCCAATTAGGTGCGGGAACTGGATCTACATCAGAAGCGAGTAGACATGGT CAGCATGTAGCGGAGGGCAGAAGAGCATGGATATTGTTATACTCGTATTG CTTCCAACTCTTGGTTAGAGAAGCCGTCGTGCATACTCTGTAGGTCTTCT TTTCTCTCGTCAAAAAAGACTCGAGACCTCAAGATGTCACCGATTTTTGA CCTACAGGCAATTAACCAACACAGGACCAGACCAAATCATATGAGTCAAA AATGAGAAGACAAGAAACAAAGTTCTAGAAACTCGAAAGGACAAGAAGAT TGCAAGAAAGCGAACAAAATGACACGAGAGAAACAAAAACTCGACTATAT GTGATATCACGCCTGGTATCCAAACGCTCAAAAAACATGTTTGCGTCTCT GTCTGCAGCGCAAGGCCTTGGCTCCGGCAGCATCATTCCGGCACGACCCA CCATTCCTTACCTACGGTTCTCAACCTGCGATTCTCAACCTCCCCGCCTC AACAACCTCCTGCAGCTGAAGAAGTGTGTGGTATGATGCCGCCCCCATGA CTTTCTCTTCCTTTTTCGCCCGGGGGGGCGGCTTTGTCACATTCTTATTC AGAGAGATCGCCCAGAGTACGTGGCCAACGACCCCCGTACGCAGCGGATG CCCTTCGGGGAGCCTTTTTTCTCATACTGTGTTGAAGATCGCCCCGTGGG GCGTTCGCCCCGGTCTGAACAGTACCTTCCATTTCGTCGCGGGAAGGGTT AACCAGTGCTCTTCGTACAGGATGTCCACAGCTGTACCGGCCTCTGCCCT CTCATCATTGTGTTGCTTTTGCGAACTGACAGCTGTGCCCGGTGCTCGCT GCTGCACAGCACGCAAAGTAATATTTTCTTTTCAATGCCACGCAGACCCC CACACCCCCTCGGTTTCCTCATTCCGCAATTTCCCTTTCGCCAAAACGCA ACCAGACTCTCTCACGAAAATCGGGCGATCCATACTGGGCCGCGAGCGAT GTTCGTTGGCAGTCGAGCGTCGAGAGAGCTGACCCACCTCATCATGGTGC CGTGCCACGGGGTGACGGTAACCGAATCTCTAGAGGGTGCGGACAGCAGG GATGCCGATTGGTTTCTGCTAGACTACCAGAAGGGGAAGGACGTGCCGCG TGCGCTAGTGGGACACATCCAGGGCGGTCTGGACGAGCTGGAGGCTGACA AGAACTCGTTGCTTCTCTTCTCGGGTAAGTGAGTCGTCCGTTACACCCGC CTAATGCCGCTCCCCTTTTGTCTGCTCGAAGCTTGCCTCACTGTTTGCGG GTTCTTTTTGCTGAAACGAGGTCGTACAAAATCAGGAAACGAACGCCGAC ATTTTCCGAGCCTACACGGAGGGACGCCACGCTCCATTCTTGACGTTGCC ACGCCCCCTCGACGACCGCAAACTCAAAACGAATTCGGGTAGTGATCATA TGCCCGCCGGCCAGGTTAGGGTTAGTTCGTCGAAGGAGTTGTAGGGTTAG TCGTCCTTCGGAAATTGGCCACACTAGTGAATAGGCAACCAGAAGCGTAT TCGTCGCTACAGTCGTAGGCATCACGTCGCGCGTGCAACGGGACGCCGAT GACCTACAGACCAACGTGAACCCCGCCGATGACCTACAGACCAACGTGAA CCCTTGTCTGTGATTTCGTGACGGCGTATACTCCTGCTCGTTCTCTTGAG AGGCACGTTTCGTACTTGCGGGCTTGATAAACTGCTGCGTGCTGGCCGAT TGATGTGCTTTAGCTTTTCCACGCGAGTATCATACGACGGTGACGATGTT GCGAACACCGAGGCAGTAGCAGGCGGTATTGATCATTTGGATGTTCATAC TTGTACGTGCCCGGGCGGGCTCAGCTTGCCCAAAAACATTGACTACCAGA TATCTGTTGTGTGCACCCTTACGTGTTTCCCTGCTCAACTGCCTTCCTCA ATTTATTATCTGCGCGGCCGGGCGGTGCTTACCATTAAGGTGGAAAAACA AGGGGCCCCGCGGGACCGAAGAGCGAGGGGGAGTCGTACTTTTTCGTGGC GGACCACTACGATTGGTGGGGCAAGCCAGACTTGAGGGCGAGAGCTTCTA CCGAGGATTTCGCGCGAGATTCCTTCGAAAATGTTTTATTTTCTATCTGC AGGTATGATGCGTGCACGCGTCGCACTACAGACACGCCCAGAGATGTTTG AAGTTCAGAGAAGTGGGAGACACGTTACCGGGTATATCTAATGTTCTGAC GTTGAGGTGTGGAGAGGGCGGTGGTGGTCAAGGCCCATGCGCGGTTAGTA TCCCCCGGGCGTTTGTCCCTCTGTTTCGAAAAGGCAAAGCACATCAAACA AGATTATAAACGCACGGCAGGAAGCACGATGTCACTCTGGGTAAAGATGC CGACATCTGTGGCTGGGACTTCCATTCACTCGTCGCAGCTTTGTCGATGC AGCCATCCATGCATACCCCTCCCCCCTTAATTCGTCAGCTTCCTTTCCAT CTACCGACAATCATCAACAGGTTCAAGGAAATCACGGGCAGCTACCCCAC AAAGATCACCATAATTGGATTCGATTTCAAGGAGGAGCGCTTCGAGGGTC TGCACGCACCTGCCCTCCGGTTCCCCCCAGAGGCATTCCGATACGTTGGT CAACACCCGGGGGGAAGGTTTGACCACGCCGCCGCGGCCGAGGGCGAACG AGTGTCGGCGCTCGAACCCTACCGATTGGATCCGTACGGGTGCGCGGCCG GCGGCGCGTTGGCGAATAAACGGCAGGAGCGGGACCCGTTCCACAGAACG CCGCCGTACAGCCTGGTGTGCCCGGAAATGTCGGAGTTATTGGAGTATTG CGGTACCGAGCTTTTCTCGGGCGACCTGCCGTGGTCCCCCGTCGATGCGG ATGCGGGTGGGGCCGGGGAAGGGCTCGGTGTTCGCGAGCGGCTCTGAGCC ATGGGGTGGCGCTTTGAGGGGAAGGAGAGAGAAAGCGTGGTATGGTAGAT ATAGGTTTTATTTTATTTTTGCTGCAGTACTGCTGTTTGTGTTTTTGTCA CCGTCGAGCGCCTTAGTTGCTCGCCTATAGTCAGGGAAGTCAATCAACTC GTTGGTTGGATCAGTACGCATGTGAGGGTACTGCTATGGACGGAGATCAA ATCGAGTTTAAAATGAGTATGTACAGCAACACGAATCAACAGCAACAACG GGCGTGTGCAGTATGCATGCTCTGCTCGCGCTTTACCGTAGGTTGTCGAC ATAGGTACGGCAGAGATCGTTCGTACGATAAAGACTGCTTTAGTGGTGAC GACCGACGTTGGTCCAGACAACGATGTGGTAGGCCGTGAAAAGTATGTAG GGCGTTGCCGGAAAGTTTTTTTGCTATTTCCGGGTCGTGTGTGATACCTT TGGGTGTTTCACGCATTTTATGGAAAGCACGTATCGCATCATACGTGTGA AAACCCAGCTGTGCCTGGTCGTCTGATTTGTAAGATCAAAGTGAACGAAA CGAAGCTCACAGCCCCCGCGGCAGTGAGGTGTGTAACAAGAGGGTTCCGA AGTCGGGCATGGGAAAGCCTTCATCTTGAGGCGAGACAGGAGATGGCGGG GGTCAGAAACCAGCAACACTTTTTCTTCATATTGTTTTTATCACCGCTGC TGGTAGATGGGCCTCAAGGACTACCGGCAAGTGCTCGATCTCAGCGGTTT TGGCTTAAGACAACGGTTAATTCCAGCTACCCCTTCGCTCCGCGCACATC GACTCAGGCACGCAAGTACTCGGAGTAGCTTTTGTCTTGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig200:280118..285258+

>mRNA_P-littoralis_Contig200.89.1 ID=mRNA_P-littoralis_Contig200.89.1|Name=mRNA_P-littoralis_Contig200.89.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1185bp|location=Sequence derived from alignment at P-littoralis_Contig200:280118..285258+ (Pylaiella littoralis U1_48)
ATGCAGCAGCACCGGACGGTTTCTGAACCAGCAGGGTTGCGACGCCTCCT
TCGGAGAGATCATAACAGACGAACGAATAAGACGGGCGGCATACCTGCTG
CGCCGCCCGCTGGGATACTCCACTCTATGTCTACAATGGATAGTCATGAC
CTAGAGGTTGGCGGTAGCAACGGCGCTGGGGACAGCGCGACCCGGAAGGC
CTTGCCGAAAATCACACGATTGACGGGCGTTGTTCTCTTGGAGGCATTGG
CGATACTGGGACTGTTAGCCACGCTGGTTCGCGTTAGAGCTCGATGCGCC
ACAGCCTTTGCTGATGATTGGATGGGACTCTCTCACGAAAATCGGGCGAT
CCATACTGGGCCGCGAGCGATGTTCGTTGGCAGTCGAGCGTCGAGAGAGC
TGACCCACCTCATCATGGTGCCGTGCCACGGGGTGACGGTAACCGAATCT
CTAGAGGGTGCGGACAGCAGGGATGCCGATTGGTTTCTGCTAGACTACCA
GAAGGGGAAGGACGTGCCGCGTGCGCTAGTGGGACACATCCAGGGCGGTC
TGGACGAGCTGGAGGCTGACAAGAACTCGTTGCTTCTCTTCTCGGGTGGA
AAAACAAGGGGCCCCGCGGGACCGAAGAGCGAGGGGGAGTCGTACTTTTT
CGTGGCGGACCACTACGATTGGTGGGGCAAGCCAGACTTGAGGGCGAGAG
CTTCTACCGAGGATTTCGCGCGAGATTCCTTCGAAAATGTTTTATTTTCT
ATCTGCAGGTTCAAGGAAATCACGGGCAGCTACCCCACAAAGATCACCAT
AATTGGATTCGATTTCAAGGAGGAGCGCTTCGAGGGTCTGCACGCACCTG
CCCTCCGGTTCCCCCCAGAGGCATTCCGATACGTTGGTCAACACCCGGGG
GGAAGGTTTGACCACGCCGCCGCGGCCGAGGGCGAACGAGTGTCGGCGCT
CGAACCCTACCGATTGGATCCGTACGGGTGCGCGGCCGGCGGCGCGTTGG
CGAATAAACGGCAGGAGCGGGACCCGTTCCACAGAACGCCGCCGTACAGC
CTGGTGTGCCCGGAAATGTCGGAGTTATTGGAGTATTGCGGTACCGAGCT
TTTCTCGGGCGACCTGCCGTGGTCCCCCGTCGATGCGGATGCGGGTGGGG
CCGGGGAAGGGCTCGGTGTTCGCGAGCGGCTCTGA
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