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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 426 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 228 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789981.1035702-CDS-P-littoralis_Contig200:249459..249635 | 1680789981.1035702-CDS-P-littoralis_Contig200:249459..249635 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 249460..249635 + |
| 1680789981.117756-CDS-P-littoralis_Contig200:253847..253899 | 1680789981.117756-CDS-P-littoralis_Contig200:253847..253899 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 253848..253899 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789981.1283178-UTR-P-littoralis_Contig200:253899..254095 | 1680789981.1283178-UTR-P-littoralis_Contig200:253899..254095 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 253900..254095 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.69.1 >prot_P-littoralis_Contig200.69.1 ID=prot_P-littoralis_Contig200.69.1|Name=mRNA_P-littoralis_Contig200.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=76bp
ESRWGGGVESIIFCRAPFSCGGTLHTQHQQDFIRLYIAPTRTPGARNGVL
DPRGIDQSSNTHTTYVAEGRSGNSW* back to topmRNA from alignment at P-littoralis_Contig200:249460..254095+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig200.69.1 ID=mRNA_P-littoralis_Contig200.69.1|Name=mRNA_P-littoralis_Contig200.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4636bp|location=Sequence derived from alignment at P-littoralis_Contig200:249460..254095+ (Pylaiella littoralis U1_48)
GAAAGCAGATGGGGGGGTGGGGTTGAGTCAATAATTTTCTGTCGTGCCCC
ATTTTCGTGCGGCGGCACGCTACACACACAACACCAACAGGACTTTATAC
GGCTGTATATTGCGCCAACACGCACCCCCGGAGCCAGGAACGGAGTGTTG
GATCCTCGAGGAATCGACCAGAGCAGGTGCATGCAGTTGGTCTATGCAGC
GTAGGCGTAGACCTAGCTACGGATTCGCCCCGCGAAGCCACGACGACTCT
TCAATGGGTGGGGGCGGGGGGGGAAGAAGAGGATCGCAGACTTTGCCGCG
TACCCATGATGGGAGCCTTTTTAGGAAGGCAGTGGGCTGCCGATCTGCTG
TCGCAGATTCACTAGTGCAGCGCTTACACTCGTCGTTGAAGATCTCTCCA
GTTGGAGATGATCTGTTCATGCGAAGTAGCATGGTGTCGACCTCTTGTCT
CACAAGAGGCATTAGGGAGCACAGAGCGAAGTCCGAGGATACGATACTTC
TTGATACACCAACAAAACAAACAACCGGCGTCAGCTGTCTCTCTTGTCTT
GGTGTTGGCAAAGGAAGTTAGAGGGAAAGTGGACGGAGGGAACGGGGAGG
GGGAGAAAACTTTGGAGAAAGGGGTGGGGTTGCAATACCATGAGGACACT
TGCCCGAAAGACCATGCAGCACGAGTGACTGTAAAAAAAAGTTACCCTTG
GACACTGATTTTCCCTGTGCCGCGCTTTTGGCATGGCTGGGCTGATGGCT
GATGGTGGGGGCGACGTGGAATCAATCATACTACCCACACACAACCTGTG
TATGCGAGGAAGGTTACAGCAGTACAGGAATTGAGAAGCAGTTGTGTGGC
CGCCTCTCAAATAACTGCGTTAAGCCGTGTGTGTTGCTGTCTGGTGGCGT
GTACCGTTGTTGCAGTGCTGCTGCAGAACAGCTGCTGTTCCGCTAGTATG
ATACAACGAACTCAAAACGCCTCTCATCATTTTTCACAAAAAAGCACCGA
TAATTACGCGCCTCCGACAACATACTCCGTATGTACGAGTAACTGTAAGC
AAGTAGGACACGGGCTGCGGTGAACCCAGCAGCAATTGGCAAGATGTTAT
TAACCCCATGAGCTCAAGCCCCTGGTCGTAATGATCTGTGCTGCACTGGT
GCCATGGTGTTTCAAATGTGCCCACTGTCTAAAAAAAACACAGCAGTTTG
ACAACTAAAAATCTCGGAAATCATACAGAGAGGCAACACCGAGACACACA
CGCGCCCCTTCACTAGGGAGGCACTTTTTATTTATTTTTATTCTGAAATT
CCACACCTGAACATCACGACCAAGTCGGTTTGAATTCAAAGTAGTTCGAC
AAGGAACTAAAATAGTTCGCTTGCGCTCGTGGCCTGCTTGTCGATATGAT
TCAAACACTCGAACGATATTACTCCGAGTATTGTTTTGTTTTTCTTTCCA
AGACATCGATGTGTTCGCCTCTCTTGAGACGAGGGTTCAGAGTAGAGATC
AGCAACGAACATGGGACAGTCGAACACCTTCTTGTGTTTCCAAAACCCAT
CGGATAACAAACTGTTGCAGCCCCCCTGAGGGTATAAGGTCAATTTTTGG
GAGTCGTCAAAAAAGGTTCACCTGCGGACACATGGCCATATATTATCTGT
CACAAGAACACCCACAACCAGCAACGCGCGCGCTCGTGTTGCCTCTGGGT
ATGATAGACGATCACACATCTCGCACACATGTGCAGTTGTATTGACTTGA
AGTGCATTGCGGCGGTTGGCGGCGTGTCGGTTCGGAGGGCATCAGGCACG
AACACGGCTGCGCTTTTTTAGTTCGCGGAACCCCCCCCCCCCCCTTTCGA
AAAGTCTGAAAAAGCCTTCTTTCACGTCGAAAAAGTGTAATGTGGTGTTA
ATTCAAGTTCAAAACGGCTTGTCTGGGTAAGGCTCAAACTGAAACATTTT
CTGCTCAAGGAGTTTCGACCCAAGTGTTGATATCAGAGGACACTATGTAG
CAGCCACGTGATATCAGAGGACACTATGTAGCAGCCACGTGTGTGTCGGC
ACTTTCATATCTGCTGCTGGTGCGGAGGTGGGAAGGCCACAGAAGTGGGG
CAAAAATTCCGCAAACTGCACCGAAAGCAATCGCTCGTCGCTACTGCTGA
TCTCGCCGCCACAGACTTCAATCCTTTGAGTGTGGGTCATCTGAGGTAGC
CAAGTAGCTCATGGCACCAACTACTTACTGCTGGAGACCCGCAGTGTAAA
ACGTTGGGTTCCGAGGCGACGAGTACAGCAGTGGCCTTTGGTTACGGTCC
AATTTGCCGACATTTTGACCCATTGCTGCTGTGGCCTTCGATGTCTCCGC
ACCAGCAGCAGAATCTGGACGTGTTGACACACACGCAGCTGCTACATGGT
GCCCTCTACTGTTGTCAAAACTTACAGGTCGGGACTCCCTTGCACAACAG
ATCGCATTTGAACCTCATTCAAATAAGCTGTCATGTTGTGGCTTGAACTT
CGGGTAGTTGAAAAATGATCTTGATTGTATCGGGAAAAAATAATGTTGAG
GTGGACATGCGAGCATGACTTTGAATGAAATGGACGTGCGGCCGCTCTGC
GTGAGACCAAAGCGGACTTTTTCGGGCCCGACGCTTTCTTACCGGTATGA
TATGATCGATCTTCTGTGTGATCGCTGGCTGCTCGTTCGGTCAAGGTCAC
AATCCCCCCCCCAGTAAAAAGCCAACAATACTAGATGGGAGGTGTGTATG
CCGTGAACCCTCGATGTATATGACAGCAGTGCCACGAAGCTTGTACTTCA
AAGTATATACAGGTACGTGGTAGGACTGAAATACAGACGGAAATAAACAA
ACAAAACAACAGCCAATCTCGGCTCCCGCCACTGTTGTACGTAATAGTTA
TCATTGGTCGCAAGAAATACCACGGAGCCCCCTAGATTGTGGACCGACTT
TGAAGACCCCGTGACTGTACTCCACGACGTAAACAGTGTACTCGGTACTG
CTGTCTGTCTCCCGAGCAGGGCAATTGATCGTTTTGGAGGACGTAGTCGA
TCGATCTTTGAAATGTTTTTTTTTTATCTGTGGTATAGTGTCTCGTGCTA
CCGAATGGTACCAATGCTTTCTAAACATTGTATTATATCATTCAAAAAAA
GATGGATGGTGAAACACGAACACTTCGGTACAGCGGTACAACAGTGCTCG
TGCTTTTATCCACTGGAAAAGGCCTTTGCTCGGATCCCATACAGCAGTTC
TGCGGTACAGCAGTATCAACACTCTTTTTGTGTGCGTGTGTGTGTTAACA
GCACCAAACTTCCCCACACAAAGACCACAACCCCGTGGCGCTCCGTGCTT
CCACACACCACACAGATACATACGTCATCGAGGGTGCCACCCACCTAGAA
CAGATTTACACATGATGGCAAACACACGACCTCTAATCGTGGTCTTGGTC
TGGAGAGGTTACTGCCGCCCCGTCGATCGCTGTGGGAAAGGATTGTGTTA
CCAAGGACGCTCGACGGCAGACCCCCCATCATCCCCCCCCCCCCCCCGGC
CCTCCCCACGAAAATCATCTTACAATAAACTAAAAATGCCACCTTTGTGT
TTTCCTCTTCCTCTCATCTGTTCCGGACGCCAGTCTACACCATTCAGTAT
CAGCTGGGCGTACCGGTACCAGCTGGGCTTGGAGTCGCAACAGACAGGAG
GAAGGTCACAATCAACATCAGTTTTTTTTTTTTTGGTCTTCACCTGCCCC
CTCGTCGACTTGCTGAGAGTCGATTTTTTTTCAACTCCCTCCGTAAGAAA
TCTACGATTAGAAACATTAGAAAAATTGCGACGCTTTCGAGACCTGGTTT
CAATGGTTAGTTCGTTCGTCCGTTCGTTTTTTTTTTTGGTCTGCTTTTTT
CGGACCTTGTTTTTGTCTCGGGCGGACGAAGCAAAAGTAGTTGGTGTTTT
GTTTCAAACTGTTGTGGCACGCTCCAAGTGACATATGTTGACGCGGAGTA
ATATCCCGGTCATGAATGACGGGTACATTTTGAGTACGTGTGTGCAGTTC
CCACAGAAAACCTCGTGCCTATTTTTACCGTATTTTTTTTCTTGATGTTC
ATTCAGAACACACACAATACAGAACAACACAAAATGGCGCCACAATTTTC
GGGCGATGCTGTTGTAACATCCCAGGAGAAGAAGCCAAAGCGATATCCTC
AGAGAGAAAAGTCCATATTTTTAGTAAAAAATACTTGCAACTTGTCTACT
TGTCAAATCGCACAAGAATCCCCACCCCCCCCCCATCCCCTGGATGGACC
TTATAACATATTTGTAATAACATGTTGCATGTCCATAACATGTCGGAATC
GCCTTTTCTTTTTTGTTTGTCACCGCCCGTCCTACCAGCAACACCCATAC
TACATACGTAGCAGAAGGTCGGTCGGGCAACAGTTGGTAAGAGTCGCGAC
TGCAACACACACGCGCACACATCATCAAAACCGGCACCGACCTACACCAT
GGCGGACGAGGTCGACTTCGAACCGGAGTACGAGGAGGAGCAACCAATGG
ACGACGCTGGGGGCGACGGGGCGGGAGACAGCGGGGCGCAGGGGGGGGGT
GACGAGGAGGACGGCGTGGTGGGGAACGGAGGCGCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig200:249460..254095+ >mRNA_P-littoralis_Contig200.69.1 ID=mRNA_P-littoralis_Contig200.69.1|Name=mRNA_P-littoralis_Contig200.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=228bp|location=Sequence derived from alignment at P-littoralis_Contig200:249460..254095+ (Pylaiella littoralis U1_48)
GAAAGCAGATGGGGGGGTGGGGTTGAGTCAATAATTTTCTGTCGTGCCCC
ATTTTCGTGCGGCGGCACGCTACACACACAACACCAACAGGACTTTATAC
GGCTGTATATTGCGCCAACACGCACCCCCGGAGCCAGGAACGGAGTGTTG
GATCCTCGAGGAATCGACCAGAGCAGCAACACCCATACTACATACGTAGC
AGAAGGTCGGTCGGGCAACAGTTGGTAA back to top
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