mRNA_P-littoralis_Contig200.59.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: D7FPG4_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG4_ECTSI) HSP 1 Score: 550 bits (1416), Expect = 4.110e-187 Identity = 327/554 (59.03%), Postives = 362/554 (65.34%), Query Frame = 3
Query: 78 MEDGIRRIDASTAKYSDFVDVMKQNQP-DGRADVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSAT--VETPFFFEDDWLNWWCDRQGQDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLNGDVRPAAHYAADSPACADAAPGGEESRSHLSASAMPALGGVVVGRVEATPASLPLISVPPPAXXXXXXXXXXXXXXXXXXXSGAWQEERWTAAALEQVRAVLRELLVAPCADHIFLADDDYEHDRDCDGNSTNSSNFGSAXXXXXXXXXXXXXXXXXSLLRETVKSVEAYLLDR-CRRQQSKEPSHLLQK 1727
M +RR+DASTA+YSDFV VMK N P DGRADV FLR+EFGDMEVPVVECSP EGYGEERRVSMTLRE YLDAVHDG P+ +G G+SS S G VLYLKDWHFQRL XXXXXXXXXX +SA +ETP FF DDWLNWWCDRQGQDDYRFVYIGP GSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDR+GRDLAKDVR+G A+ DKFP LD APRLEV+QGPGEAIFVPSGWHHQVVNTGDG GGGLTVSVNTNWFNGFNL++V FL SE+SAVRAALDHLRE+MS G G GG REWE QCELVMRANS+ N+T+FAR+V ARA+ LL + D C + G S S SGAWQ+ERW AL+Q+RAVLRELLVAP ADH+FL DD + D + S G LRET+ +VE YLL R R+QS S L++
Sbjct: 1 MAKQVRRLDASTAEYSDFVYVMKNNTPKDGRADVDFLRQEFGDMEVPVVECSPLEGYGEERRVSMTLRE-YLDAVHDGER----PEPTG-----GSSSDSGGGPVLYLKDWHFQRLVRXXXXXXXXXXXXXXXXXASAAGAMETPSFFRDDWLNWWCDRQGQDDYRFVYIGPPGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRYGRDLAKDVRSGRADPDKFPRLDAAPRLEVYQGPGEAIFVPSGWHHQVVNTGDGREGGGGLTVSVNTNWFNGFNLDKVAAFLHSELSAVRAALDHLRETMSGGGGA---GGTGGR-REWENQCELVMRANSSFNVTDFARLVTARAQHLLGARAAQDSLCDDDPERCRGSGASGRGSSS----------------------------------------------------GSGAWQQERWVVLALQQLRAVLRELLVAPSADHVFL-DDGGDSASLPDEDGATSGEGGDIEGGSDRG------------LRETLDAVETYLLTRDVTREQSSGASTTLER 475
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A024TFP1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFP1_9STRA) HSP 1 Score: 237 bits (605), Expect = 8.110e-68 Identity = 144/383 (37.60%), Postives = 192/383 (50.13%), Query Frame = 3
Query: 90 IRRIDASTAKYSDFV-DVMKQNQP--------------------DGRADVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQG---QDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLNGD 1166
+ R+DAS Y +F M N+P +G +V+FLR FGD VPVV +EGYG E R +MTL + YL + SG Y+KDWHF R D +A TP FF+DDWLNWW D+ +DDYRFVY+GP+GS T LHHDVL S+SWS N+CG K W LFP T L+DR GR A + A +FP+L TA + V QG GEA+FVPSGW+HQV N T+SVN NWFN ++LE+++ FL+ E++AV + H R+S + EW C++V+RAN ++ + A ++ AR L+ D
Sbjct: 7 VPRVDASDLSYDEFCKQYMGPNRPVLITNIGADWPIYQTWRQGDNGDVNVAFLRAHFGDAVVPVVGYGKTEGYGGEDRGTMTL-DAYLALLE---------------------SGKAEAKQQYMKDWHFTR-----------------DFPETAAYTTPIFFQDDWLNWWWDQPTTPTRDDYRFVYLGPAGSTTPLHHDVLLSYSWSINICGRKEWLLFPPTETWKLWDRSGRCTATNATEFDAT--QFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRD-------TLSVNHNWFNAYSLEQMWAFLQHELAAVEREIGHCRDSFDS-------------DDEWLDHCQVVLRANIGMSYVDVAALLRARKAWYLSAD 328
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A485KUP5_9STRA (Aste57867_11851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUP5_9STRA) HSP 1 Score: 232 bits (591), Expect = 5.060e-66 Identity = 137/387 (35.40%), Postives = 187/387 (48.32%), Query Frame = 3
Query: 78 MEDGIRRIDASTAKYSDFVDV-MKQNQP-------------------DGRADVSFLRREFGDMEVPVVECSPSE-GYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQ-GQDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLNGDVR 1172
++ GI +DA+ Y F D M +N P GR D + L FGD +VPVV +E GYGE+ + YL + G+ + Y+KDWHF R D ++A TP +F+DDWLNWW R+ DDYRFVY GP GSFT LHHDVL S+SWS N+ G K W L+P TP L DR GR A+D T AN+ +FP + +A + + Q G A+FVPSGW+HQV N G+ T+S+N NWFN + L R++ FL+ E+ AV + H R+ + EW C+L++RAN +N+ EF ++ AR + D R
Sbjct: 9 VDGGIDVVDAAVLSYEAFCDTYMAKNVPVLVSNVGADWPVFRQWRDATGRVDHNALAAAFGDAQVPVVSFGQAEAGYGEDEDRQLMRLGDYLVLLATGQ------------------------SQRYMKDWHFTR-----------------DFPTAAMYTTPLYFQDDWLNWWWGRKCDNDDYRFVYFGPGGSFTPLHHDVLESYSWSINIVGQKEWLLYPPSQTPKLLDRFGRTSARDATT--ANATQFPGVASARHVTIVQDVGTALFVPSGWYHQVRNLGE--------TLSINHNWFNAYTLRRIWAFLQRELQAVEREIAHCRDGFDS-------------DDEWTNHCQLLLRANIGMNMGEFRDLLVARLKYYDTNDQR 331
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A6G0WBZ8_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBZ8_9STRA) HSP 1 Score: 231 bits (588), Expect = 9.950e-66 Identity = 136/392 (34.69%), Postives = 190/392 (48.47%), Query Frame = 3
Query: 78 MEDGIRRIDASTAKYSDF-VDVMKQNQP-------------------DGRADVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQGQDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLNGDVRPAAHYAA 1193
M D I +D Y +F + M +N P DGR D ++L + +G +VPVV S YGEE R +++L E Y+ + + P Y+KDWHF R D + + TP FF DDWLNWW DR+G DDYRFVY+GP GSFT LHHDVL S+SWS N+ G K W LFP T L +R GR + ++T + +FP+ +A RL + Q G A+FVPSGW HQV N + T+S+N NWFN + L ++ F + E+ AV + H R+S + E W C+L++RAN +N EF +++ ++A +L +G H AA
Sbjct: 1 MADEIAVVDGEFLSYEEFCAEFMAKNVPVLIKNIGKDWSVFQRWIQSDGRLDRAYLTQMYGQAQVPVVSYDTSNAYGEEDRSTVSL-ETYMAGLEETPP-----------------------PKRYMKDWHFTR-----------------DFPNDSIYITPRFFTDDWLNWWWDRKGGDDYRFVYLGPKGSFTPLHHDVLQSYSWSINIAGQKEWILFPPSETWKLKNRFGRTPSGSIKT--CDPAEFPHAASAQRLTIVQDIGTALFVPSGWFHQVTNLTE--------TLSINHNWFNAYTLRLIWVFFQQELQAVEHEIAHCRDSFESVAE-------------WREHCQLILRANIGMNYDEFHQLLQSKADELGHGSNANRRHDAA 328
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: W4GAV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAV2_9STRA) HSP 1 Score: 224 bits (572), Expect = 4.450e-63 Identity = 135/374 (36.10%), Postives = 183/374 (48.93%), Query Frame = 3
Query: 90 IRRIDASTAKYSDFVDV-MKQNQP------------------DGRADVS--FLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQGQ--DDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAAR 1142
+ RIDA+ Y F ++ M N+P DV+ +LR FG VPVV + YGEE R +M L YL + SG Y+KDWHF R D TP +F+DDWLNWW D+Q DDYRFVY+GP+ S T LHHDVL S+SWS N+CG K W +FP T L DR GR A T A + FPN+ +A ++V Q GEA+FVPSGW+HQV N G T+S+N NWFN ++LER++ F+++E+ AV +DH RE+ + +W C++++RAN ++ EFA ++ AR
Sbjct: 9 VPRIDAAALSYEAFCELYMAPNRPVLIRNIGLDWPIYHAWRRSEHNDVNHAYLRATFGHATVPVVGYGRLDAYGEEDRCTMPLA-MYLTLLE---------------------SGEAQAAQKYMKDWHFTR-----------------DFPHGPVYTTPEYFQDDWLNWWWDQQADIHDDYRFVYLGPANSTTPLHHDVLLSYSWSINICGKKEWLMFPPTETWKLRDRSGRYTAPSANTVDATA--FPNVTSARYIKVVQEVGEALFVPSGWYHQVRNLE-------GTTLSINHNWFNAYSLERMWAFMQAELHAVEQEIDHCRETFDS-------------DDDWHHHCQVLLRANIGMHFNEFAALLQAR 321
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A8K1CS59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS59_PYTOL) HSP 1 Score: 222 bits (565), Expect = 3.300e-62 Identity = 137/382 (35.86%), Postives = 184/382 (48.17%), Query Frame = 3
Query: 90 IRRIDASTAKYSDF-VDVMKQNQPDGRADV------------------------SFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQGQ--DDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQL 1154
I +DA T Y F M QN+P +V +LR +GD EVPVV+ +E YG + + +M + YLD + R YLKDWHF S TP +F+DDWLNWW DR+ + DDYRFVYIGP+GS+T LHHDV S+SWS NVCG K W F + L D+ GR + D+ + + D +P A L V Q GEAIFVPSGW+HQV N D T+S+N NWFNGFN+ ++ F +SE +AV L+HL+E G+ G + R+ QC+L+M+AN+ +N EF ++V A+ L
Sbjct: 3 IEVVDARTLSYEAFCTQYMAQNRPVRLVNVVKKWFPQACAWRVTQDTGEMAINYGYLRANYGDQEVPVVDGESTE-YGCQAQSTMRFAD-YLDLMQQKRAGKQ-----------------------YLKDWHFVHAV----------------HPSPPLYTTPVYFQDDWLNWWWDRKDESSDDYRFVYIGPAGSWTPLHHDVFRSYSWSVNVCGQKEWIFFHPDEESKLKDKFGRTVLPDITSKDYDKDLYPRAHEATPLYVVQDSGEAIFVPSGWYHQVRNVRD--------TISINHNWFNGFNILEIWSFFKSEYAAVETELEHLKEI----------GLTGLDFRD---QCQLIMQANTGMNYVEFRQLVEAKVLDL 322
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A329T2P2_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T2P2_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.160e-61 Identity = 139/382 (36.39%), Postives = 185/382 (48.43%), Query Frame = 3
Query: 102 DASTAKYSDF-VDVMKQNQP------------------DGRA-DVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTV--LYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQ--GQDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLNGDVRP 1175
DA T Y DF M N+P DGR + +L+ +G PVV +E YG E R +M L E YLD + NGT YLKDWHF TP FF+DDWLNWW D + + DYRFVY+GP+GS+T LH DV S+SWS NVCG K W + + L DR GR + DV G+ + + +P+ A + V Q G+AIFVPSGW+HQV N D T+S+N NWFNG+N+ ++DF + E +AV L+ L+E G++G RE+ QC+LVMRAN+ +N EF ++ A+AR+LL P
Sbjct: 5 DAMTLSYEDFCARYMAPNRPVLLRNVTDAWFSKARQWRDGRKINFKYLKEHYGAALAPVVSGDVAE-YGAEDRWTMRLDE-YLDLIE-------------------------NGTAGKKYLKDWHFVH------------------AFGHDVYVTPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHQDVFRSYSWSVNVCGRKKWVFYHPDDESKLKDRFGRLVVSDVTVGNIDKENYPHFHEAKPVYVIQETGDAIFVPSGWYHQVENLED--------TISINHNWFNGYNVRELWDFFKKEYAAVERELEDLKEM----------GLVG---REFVDQCQLVMRANTGINYLEFRELLYAKARELLEKREHP 320
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: G4YKL4_PHYSP (JmjC domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKL4_PHYSP) HSP 1 Score: 217 bits (552), Expect = 1.450e-60 Identity = 136/376 (36.17%), Postives = 185/376 (49.20%), Query Frame = 3
Query: 102 DASTAKYSDF-VDVMKQNQP------------------DG-RADVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTV--LYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQ--GQDDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLL 1157
DA+T Y F M +N+P DG R + L+ ++G E PV +E YG E R ++ L E YL+ + NGTV YLKDWHF ETP FF+DDWLNWW D + + DYRFVY+GP+GS+T LHHDV S+SWS NVCG K W + + P L DR GR + DV + +K+P+ A + V Q G+AIFVPSGW+HQV N D T+S+N NWFNG+N+ +++F + E +AV L+ L+E G++G RE+ QC+LVM AN+ +N EF ++ A+A LL
Sbjct: 5 DAATLSYEAFCARYMARNRPVLLRNVTDKWFPGAAQWKDGQRINFQHLKAKYGAAEAPVASGDVAE-YGAEERCTLRLDE-YLELIE-------------------------NGTVGKRYLKDWHFVH------------------AFGHDVYETPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHHDVFRSYSWSVNVCGRKEWIFYHPDDEPKLKDRFGRFVLPDVTAEDVDREKYPHFHEAKPIYVIQETGDAIFVPSGWYHQVRNLED--------TISINHNWFNGYNVRELWEFFKREYAAVEHELEDLKEM----------GLVG---REFVDQCQLVMLANTGINYVEFRELLYAKASYLL 314
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: K3X8M4_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8M4_GLOUD) HSP 1 Score: 215 bits (547), Expect = 2.150e-59 Identity = 130/350 (37.14%), Postives = 179/350 (51.14%), Query Frame = 3
Query: 114 AKYSDFVDVMKQNQPDGRADVSFLRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNWWCDRQGQ--DDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLL 1157
+K+ D + DG + L+ ++G +VPVV+ E YG E R +M E YL + N +G YLKDWHF TP FFEDDWLNWW DRQ Q DDYRFVYIGP+GS+T +HHDV S+SWS N+ G K W F + L DR GR + DV + +FP++ A + V Q GEAIFVPSGW+HQV N T+S+N NWFNG+NL++++ F + E AV L+ L+E G++G RE++ QC++VM+AN+ +N TEF ++ ++A +LL
Sbjct: 32 SKWFQVADAQWRCAHDGSINFDALKVKYGHAQVPVVDGDVVE-YGAEARTTMRFDE-YLALLQK------------------NDAGK-----RYLKDWHFVHAF-----------------PDQPVYTTPTFFEDDWLNWWWDRQEQSGDDYRFVYIGPAGSWTPMHHDVFRSYSWSVNITGRKEWIFFHPDEEWKLKDRFGRYVIPDVTMEDVDRTQFPHIHEAIPIHVTQETGEAIFVPSGWYHQVKNVE--------ATISINHNWFNGYNLDQLWQFFQREYDAVENELEDLKEL----------GLVG---REFKDQCQVVMKANTGINYTEFRAMLYSKAHELL 318
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Match: A0A1V9YB13_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB13_9STRA) HSP 1 Score: 213 bits (542), Expect = 6.440e-59 Identity = 134/400 (33.50%), Postives = 180/400 (45.00%), Query Frame = 3
Query: 84 DGIRRIDASTAKYSDFVD-VMKQNQP-----------------DGRADVSF--LRREFGDMEVPVVECSPSEGYGEERRVSMTLREFYLDAVHDGRPSSASPDGSGHDSACGNSSGSVNGTVLYLKDWHFQRLRIKGSGXXXXXXXXXXDGVSSATVETPFFFEDDWLNW---------------WCDRQGQ------DDYRFVYIGPSGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRHGRDLAKDVRTGSANSDKFPNLDTAPRLEVWQGPGEAIFVPSGWHHQVVNTGDGSPDGGGLTVSVNTNWFNGFNLERVFDFLRSEVSAVRAALDHLRESMSAAGEGPEKGVLGGESREWERQCELVMRANSALNLTEFARIVAARARQLLN 1160
D + R+DA Y++F M N P D + + F LR +G + PVV YG+E R + + YL+ + GR LYLKDWHF R D S TP +F DDWLNW W DR+ + DDYRFVY+GPSGSFT LHHDV S+SWS N+ G K W LFP TP L DR GR + DVR A K+P A L V Q PG A+FVPSGW+HQV NT T+S+N NWFN +NL ++ + +++++ V ++H R+S +A E W C+L++RAN ++ E ++ AR + N
Sbjct: 2 DQVPRVDAGDLSYAEFCTRFMAPNLPVLVTNVGSNWPVVRDWVDAQRRLRFEELRDRYGQVLAPVVASGAKNEYGDETRDDVVVAT-YLEWLESGR---------------------AEAEQLYLKDWHFTR-----------------DFPSDDLYSTPEYFADDWLNWCGSKHKCLVIHLWLRWWDRKARRGDKARDDYRFVYLGPSGSFTPLHHDVFQSYSWSINISGQKEWLLFPPSETPKLLDRLGRSVPSDVRQIDAT--KYPMAHLAQALRVLQPPGAALFVPSGWYHQVTNTA--------TTLSINHNWFNAYNLATIWRYFQAQLAEVEREIEHCRDSFDSAAE-------------WSAHCQLLLRANIGMDYGELHALLQARLTEATN 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.59.2 >prot_P-littoralis_Contig200.59.2 ID=prot_P-littoralis_Contig200.59.2|Name=mRNA_P-littoralis_Contig200.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=557bp MGAMEDGIRRIDASTAKYSDFVDVMKQNQPDGRADVSFLRREFGDMEVPVback to top mRNA from alignment at P-littoralis_Contig200:206867..211833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.59.2 ID=mRNA_P-littoralis_Contig200.59.2|Name=mRNA_P-littoralis_Contig200.59.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4967bp|location=Sequence derived from alignment at P-littoralis_Contig200:206867..211833- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:206867..211833- >mRNA_P-littoralis_Contig200.59.2 ID=mRNA_P-littoralis_Contig200.59.2|Name=mRNA_P-littoralis_Contig200.59.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1671bp|location=Sequence derived from alignment at P-littoralis_Contig200:206867..211833- (Pylaiella littoralis U1_48)back to top |