mRNA_P-littoralis_Contig200.55.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: D7FPG6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG6_ECTSI) HSP 1 Score: 663 bits (1710), Expect = 2.360e-222 Identity = 462/864 (53.47%), Postives = 526/864 (60.88%), Query Frame = 1
Query: 46 ASNRQRRRRLRGWICPILGAGLSIGLPLLGR-VDGFNPPPL----LLLG-GRLSLEQNQR------TQRGLELPSSAYYSTQRQERRCSEAGAWEASRRD--RGVRAGGLGDAATGHE-QLNGGYAMDEGWMGNNWTA--GDRXXXXXXXXXXXXXXXXXXAIATAA-AKESMEAAAKQAVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVFQIGKIRLDPNDPT-ANQFRISKVASQNSMKSLKLGEVMDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLELVPQLKQRLRDRGLPVSGKKADLITRLLESMAADAFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYGGFEGRPGAAEGEEEARNRRIDGYAALVSIVSGALENSPD----DGVVSSRALGRELSRLPSPENPSETALMCLKSRWPSLMAFLKACPSDFTVTDIGKSKEFGVVKNDRGXXXXXXXXXXXXXXXXRFEESRHGVGRSRTVVARAAAVVNGGDGR 2568
+ +++RRRRLR W + G+G+ IGL LL R DGFNPP L LG G LSL + +R T+ P + YS + + S+R RG R D G E Q GY M+E G W G XXXXXX XXXXXXXA++ A +ESM+AAAK +VPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVY+Y VKWEMLPVIISRAVHAQLA+Y QSSRLVEVVRTVVFSSARKDTDKDS RM+MFNAMREKNFEVHMATT+GVQEKCIDIALAVEMMHYATIPDTYD+GVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQ LLRDDAHV DFEP+WINEYLDDLMEY P E +GA+ +KVAPE+LCQ+V+KL++Q+GGSI SR LGRELNKI VD+DGT ALSVIKE WQ LS+F+ EH+D+FQ L ++PT ++ ISKV SQNSMKSLKLGEVMDES XXXXXXXXXXXXXXXXXXXXX E++PQLK RLR+RGLPVSGKK+ L+ RLL+SMA D+ P XXX G RP E+ A+ RR +G+AALV +VS L G+ SSR LGR L+ PSPENP+ETALMCLKSRWPSLM F+K+CP +FTVTDIGK KEFGVV N+RG EESRH G + V A VN DGR
Sbjct: 5 SDSQRRRRRLRSWRGSVSGSGILIGLQLLARGADGFNPPLLEPSAAGLGVGLLSLAEQRRLPSTSTTRWQRTAPDNRLYSEDSSTHNPAGSRGCHGSKRGARRGSRLAAADDDNGGPEYQRRNGYDMEERLEGRAWVVEGGXXXXXXXXDVGVSXXXXXXXAVSNAVPTEESMDAAAKLSVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQSSRLVEVVRTVVFSSARKDTDKDSTRMRMFNAMREKNFEVHMATTVGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVTDFEPIWINEYLDDLMEYVPPVEGIGANKVKVAPEILCQVVMKLVEQQGGSINSRLLGRELNKISVDEDGTTALSVIKERWQVLSRFVFEHSDMFQA---ILPVSNPTKTKEYTISKVDSQNSMKSLKLGEVMDESVSDDXXXXXXXXXXXXXXXXXXXXXMGGGSACDADEERVTEESLSG--------EVIPQLKTRLRERGLPVSGKKSVLVARLLDSMAGDSRPPPAPRRRGDPPIVGAGATPEGEAVVTPPDVGRGLGHGDANAADGGXXXRGLPGGWAAAAADALLAGDSSYLRLNMPSGGGSGGSGGRMQGHAGGRGNGGVVGD-----------------GSPAPRPPGLTAEKAAKARRKNGHAALVGLVSRLLSEEARAPGFSGITSSRQLGRLLAAHPSPENPNETALMCLKSRWPSLMTFVKSCP-EFTVTDIGKEKEFGVVMNERGGWASRGG-----------EESRHRPGSGQAVAA-----VNDSDGR 823
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A835YIR6_9STRA (NYN domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR6_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.750e-73 Identity = 128/245 (52.24%), Postives = 168/245 (68.57%), Query Frame = 1
Query: 538 LKVMVFIDGTWLYYSFFGRGER-CHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTY-----DIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGGSIMSRELGREL 1254
L+V VF+DGTWLYYSFF R R C + +KLG W DYKV WE +PVI+ RA+ QL Q+ R VEV RT VFSS R+DTD +S RM+MF M+ NF+VH++ T G+QEKCIDIALAV+M+HYAT+P Y D + DKDFMPAM RTR+KG+RV LCSMRNSCN+ LL AH MDF +W+++Y D+L E + N + ++LC++V ++++ G ++ SR LGREL
Sbjct: 1 LQVQVFVDGTWLYYSFFARTTRNCEIRSKLGAYWYRDYKVLWERIPVIVGRAIQEQLQAQQQTDRFVEVYRTTVFSSLRQDTDPESLRMRMFTQMQRLNFDVHLSVTTGLQEKCIDIALAVDMLHYATVPGAYVHFQCDELPHIYRDKDFMPAMLRTREKGKRVGLCSMRNSCNRALLDPAAHTMDFGVIWLDDYFDELFE----KQRGRMENSPMPADMLCEMVAGILEKHGSAMSSRLLGREL 241
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A7S3WHV0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WHV0_EMIHU) HSP 1 Score: 254 bits (649), Expect = 1.960e-71 Identity = 128/253 (50.59%), Postives = 172/253 (67.98%), Query Frame = 1
Query: 529 AVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKV-APEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGT 1284
A PL+VMVF+DG+WLYYSF GR C V + G GW + V ++ LP +IS+ +H QL + + R VE+ RT+VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YDI VL++GDKDF+PAM+R RQKG+ V LCSMRN C++DLL +AHV DFEP+W+++YLD ++ SP++ S+ + A L +++ + GG+ SRE+GR L V D T
Sbjct: 71 AFPLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHVRDFEPIWLDDYLDLIVLPSPKAPSISPDAPRSPAGLALLRVLSAFLRANGGAARSREIGRFLRSSAVPVDVT 323
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: L1K3W1_GUITC (NYN domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K3W1_GUITC) HSP 1 Score: 241 bits (614), Expect = 8.700e-66 Identity = 131/311 (42.12%), Postives = 188/311 (60.45%), Query Frame = 1
Query: 532 VPLKVMVFIDGTWLYYSFFGRGE-RCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVFQIGKIRLDPNDPTANQFRISKVASQNSMKSLKLGE 1461
VP+KVM+FIDGTWL+YSFF RG+ RC K G W+ D+ + W L I + L R V+V+R +VF S R T S R++MF M NFEVH+ T G QEKC+DI+LAV+MMHYA++ D YD VL+TGDKDFMPAM+R +QKG+RV L SMRNSCN+DLL +HV DFEP++I++ +D + + +SV + + L QLV+ + GG R++GR L +D G+ AL +++ +Q+L FL E ++F I L+ D + R + ++ ++ K+ + E
Sbjct: 124 VPIKVMIFIDGTWLFYSFFSRGQSRCPFIKKFGTNWIEDFSIDWAELQAFIRETLQRHLP-----GRFVDVMRVIVFGSVRSGTHPSSLRVRMFQEMDRSNFEVHLLTHTGGQEKCVDISLAVDMMHYASLQDGYDACVLMTGDKDFMPAMSRVKQKGKRVFLASMRNSCNRDLLDRSSHVYDFEPIFIDDAIDRITVRRKQKDSV--IELGHIQQSLSQLVVNFLADNGGRQTMRDVGRHLQANTID--GSNALELLRYHYQNLRSFLDESPELFFINGANLELLDKNGDHDRYNYISEEDMDKTSDMEE 425
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A0M0J6Q8_9EUKA (NYN domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6Q8_9EUKA) HSP 1 Score: 236 bits (602), Expect = 9.100e-66 Identity = 118/270 (43.70%), Postives = 177/270 (65.56%), Query Frame = 1
Query: 547 MVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVF 1356
M+FIDG+WLYYS GR C V+ K G GW Y + + ++ LP +I++ +H ++ + ++ R VEVVR+V F+S R DTD S R ++F M + N++VH++TT+G QEKCIDIALAVEMMHYA++P YD+ VLV+GDKDFMPA++R R KG+RV +CSMRN C+ DLL AHV DFEP+W++++LD L+ P+++++ AP+ +++L+ + I R L + ++ + T LS +K+ L F D+F
Sbjct: 1 MIFIDGSWLYYSLHGRRPNCPVTRKYGEGWEYSHSIDFDRLPQLIAQRLHKEMLERFKTQRFVEVVRSVAFASMRADTDVQSPRKRLFKGMEKANYDVHLSTTVGHQEKCIDIALAVEMMHYASLPGAYDVAVLVSGDKDFMPALSRIRTKGKRVAICSMRNCCSHDLLGPQAHVRDFEPIWLDDHLDYLIR--PKADALAPG----APQSTASELLRLVKE---FIRERTLAGQSPASRIGNEDT--LSQLKQRHFGLRAFFATFPDIF 259
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A7S2R6D8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6D8_9STRA) HSP 1 Score: 229 bits (583), Expect = 7.120e-61 Identity = 138/403 (34.24%), Postives = 219/403 (54.34%), Query Frame = 1
Query: 535 PLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASN-IKVAPEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVFQIGKIRLDPNDPTANQFRISKVASQNSMKSLKLGEVMDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLELVPQLKQRLRDRGLPVSGKKADLITRLLESMAA 1740
PL+ M+F+DGTWLYY RG C ++ + G W + + W LP +I R++ +L + S ++V+VV+TVVF+S RK+T S R++ F M+ +F+V+MATT G QEKC+DIALAVEMMHYA IP YD+ +LVTGD DF PAM R R++G+RV L + R CN +++ H+ D+ PV++ +L + + +VG+++ + V L +V+++++ +GG++ SR+LGR L D LS+IK ++ S+ +F+ F I + +DPT+ +F +S + + XXXXXXX LV +L+ +LR+ LPVSG+KA+L+ R+L + ++
Sbjct: 52 PLRTMIFVDGTWLYYCMHERGSSCPITFQFGDAWEQSHTIDWSRLPALIGRSIEEELVRRGGSRQVVDVVKTVVFTSVRKETGHQSKRVRFFQGMQAAHFDVNMATTPGPQEKCVDIALAVEMMHYAHIPGAYDLALLVTGDMDFAPAMQRVREQGKRVALVTFRQWCNAAMVQPGVHLSDYSPVFLENHLSEFI-----FPAVGSTDRVGVTKHELVDVVVEILESEGGALSSRDLGRRLQVSMYDNQDV--LSLIKHSFGSVHQFV----KTFPKDFIVVHNDDPTSREFVVSLRSDVSRNSDXXXXXXXXXXXXXXXXXVDDEITVGKAHRSHRRHGDSVSAKFAPFRRNEELSAPGGDHQQSLEDLLVSELQGKLRELNLPVSGRKAELVERVLSAQSS 443
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A7S1BIU1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIU1_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.880e-59 Identity = 126/305 (41.31%), Postives = 187/305 (61.31%), Query Frame = 1
Query: 499 KESMEAAAKQ----AVPLKVMVFIDGTWLYYSFFGRG-ERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSS-RLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIK-LMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVFQIGKIRLDPNDP 1392
KE M++++ + PLK M+FIDGTWLYYS + R +RC + G GW + + W LP +I++ + Q+ + + S+ R +E+VR VVF+S + TD+ S R+ MF M E N+EVH+ T G EKCIDI LAVEM+H+A D YD+G+L++GDKDFMPA+ RTRQKG+RV + SMR CN L + HV DFE VWI++ LD+L+ S++ S+ KVA + +++ ++ GG + SR++GR L +++ GT L +K L FLL H +F + + +DP
Sbjct: 174 KERMDSSSSELKLATTPLKAMLFIDGTWLYYSLYRREPDRCPIIQAYGLGWKHTHNFDWAALPRVIAQELERQMRELNWSTARPIEMVRAVVFTSYKATTDRLSRRITMFQEMAEANYEVHIMETTGTHEKCIDIQLAVEMVHFAGT-DAYDVGILLSGDKDFMPALVRTRQKGKRVGIVSMRRGCNSALRDPNMHVKDFEIVWIDDQLDELLVPIEISKTDTNSSAKVAAATMMKVMYDFIISSPGGRVSSRDIGRYLKGVEIS--GTNMLEQLKLGHGGLRSFLLRHQGIFSMVEFNHKTSDP 475
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: R1DRX1_EMIHU (NYN domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRX1_EMIHU) HSP 1 Score: 222 bits (565), Expect = 9.850e-58 Identity = 120/252 (47.62%), Postives = 156/252 (61.90%), Query Frame = 1
Query: 529 AVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGGSIMSRELGRELNKIKVDKDGT 1284
A PL+VMVF+DG+WLYYSF GR C V + G GW + V ++ LP +IS+ +H QL + + R VE+ RT+VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YDI VL++GDKDF+PAM+R RQKG+ V LCSMRN C++DLL +AH P +PRS + A L +++ + GG+ SRE+GR L V D T
Sbjct: 60 AFPLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHAPSISPD------------APRSPAGLA---------LLRVLSAFLRANGGAARSREIGRFLRSSAVPVDVT 290
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A7S1BHS6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHS6_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.020e-57 Identity = 126/305 (41.31%), Postives = 187/305 (61.31%), Query Frame = 1
Query: 499 KESMEAAAKQ----AVPLKVMVFIDGTWLYYSFFGRG-ERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSS-RLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIK-LMDQKGGSIMSRELGRELNKIKVDKDGTKALSVIKETWQSLSKFLLEHNDVFQIGKIRLDPNDP 1392
KE M++++ + PLK M+FIDGTWLYYS + R +RC + G GW + + W LP +I++ + Q+ + + S+ R +E+VR VVF+S + TD+ S R+ MF M E N+EVH+ T G EKCIDI LAVEM+H+A D YD+G+L++GDKDFMPA+ RTRQKG+RV + SMR CN L + HV DFE VWI++ LD+L+ S++ S+ KVA + +++ ++ GG + SR++GR L +++ GT L +K L FLL H +F + + +DP
Sbjct: 174 KERMDSSSSELKLATTPLKAMLFIDGTWLYYSLYRREPDRCPIIQAYGLGWKHTHNFDWAALPRVIAQELERQMRELNWSTARPIEMVRAVVFTSYKATTDRLSRRITMFQEMAEANYEVHIMETTGTHEKCIDIQLAVEMVHFAGT-DAYDVGILLSGDKDFMPALVRTRQKGKRVGIVSMRRGCNSALRDPNMHVKDFEIVWIDDQLDELLVPIEISKTDTNSSAKVAAATMMKVMYDFIISSPGGRVSSRDIGRYLKGVEIS--GTNMLEQLKLGHGGLRSFLLRHQGIFSMVEFNHKTSDP 475
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Match: A0A7S3DSQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSQ3_9STRA) HSP 1 Score: 215 bits (547), Expect = 5.840e-57 Identity = 111/248 (44.76%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 532 VPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYDYKVKWEMLPVIISRAVHAQLAQYSQSSRLVEVVRTVVFSSARKDTDKDSNRMQMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDIGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQDLLRDDAHVMDFEPVWINEYLDDLMEYSPRSESVGASNIKVAPEVLCQLVIKLMDQKGG--SIMSRELGRELNKIKV 1269
VPLK M+F+DGTWLYYS FGR +RC + K G GW Y V + +LP +I + ++ +SR +++VR VF+S + DT S R +MF M+E N++V+ T+G EKC+DI LAVEM+HYATIP+ YDI +L+TGDKDF+PA+ RTRQKGR+V L SMR+SCNQ LRD + D++ +W ++LDD++ P +E + V L V++ + G + SR++GR L + V
Sbjct: 245 VPLKAMLFVDGTWLYYSLFGREDRCPIQKKFGLGWPQRYDVDYSVLPKVICKNLNDLGWSSMDTSRPIDIVRASVFTSYKADTPSTSLRYRMFEEMKEANYDVNQMETVGRGEKCVDIQLAVEMLHYATIPNAYDIAILLTGDKDFLPALVRTRQKGRKVALVSMRSSCNQ-ALRDANGIKDYDVIWFEDHLDDILVPKPVAEQTLEEKVSV---FLVAKVLRDFIKNSGFEMVSSRDVGRYLQCLNV 488 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.55.1 >prot_P-littoralis_Contig200.55.1 ID=prot_P-littoralis_Contig200.55.1|Name=mRNA_P-littoralis_Contig200.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=855bp MVAVNASNRQRRRRLRGWICPILGAGLSIGLPLLGRVDGFNPPPLLLLGGback to top mRNA from alignment at P-littoralis_Contig200:188064..197001- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.55.1 ID=mRNA_P-littoralis_Contig200.55.1|Name=mRNA_P-littoralis_Contig200.55.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8938bp|location=Sequence derived from alignment at P-littoralis_Contig200:188064..197001- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:188064..197001- >mRNA_P-littoralis_Contig200.55.1 ID=mRNA_P-littoralis_Contig200.55.1|Name=mRNA_P-littoralis_Contig200.55.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2565bp|location=Sequence derived from alignment at P-littoralis_Contig200:188064..197001- (Pylaiella littoralis U1_48)back to top |