mRNA_P-littoralis_Contig20.44.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.44.2
Unique NamemRNA_P-littoralis_Contig20.44.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 4.560e-133
Identity = 194/303 (64.03%), Postives = 229/303 (75.58%), Query Frame = 3
Query:  219 NFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFANRKKNNGVVWLSRPK 1085
            +FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LE+VRKDV CF        RILKLR+ YH RE +DNIFFTCCILH+MLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + E+             +P HA+LK QLIESFA RKK N + WLSRPK
Sbjct:   74 HFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 7.020e-122
Identity = 205/385 (53.25%), Postives = 238/385 (61.82%), Query Frame = 3
Query:  219 NFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFANRKKNNGVVWLSRPK 1085
            +FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILH+MLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + EE             +P HA+ K  LIESFA RKK N ++WLSRPK
Sbjct:  251 HFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 2.410e-119
Identity = 167/286 (58.39%), Postives = 215/286 (75.17%), Query Frame = 3
Query:  222 FAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFANRKKNNGVVWLS 1076
            FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+ +RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILH+MLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E+          + QLI SF  RK  N + WLS
Sbjct:  197 FAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 3.340e-118
Identity = 173/257 (67.32%), Postives = 196/257 (76.26%), Query Frame = 3
Query:  357 MCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR-----PATDPEEYLF---------NPQHAKLKGQLIESFANRKKNNGVVWLSRPK 1085
            MCPFTLGRSFTGKEGFPT+A+EVTVDH GRA+ VT GFTGATNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LI+DN YHEWVTL+APSKYP    D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILH+MLH+FDG+ VF EN DW GSAG HD  +H P TD+TSVG +     P    EE            +P HA+LK QLIESFA RKK N + WLSRPK
Sbjct:    1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 257          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.990e-110
Identity = 160/286 (55.94%), Postives = 205/286 (71.68%), Query Frame = 3
Query:  222 FAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFA-NRKKNNGVVWLS 1076
            FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F   R+K   +VWLS
Sbjct:  122 FAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 3.360e-109
Identity = 160/286 (55.94%), Postives = 205/286 (71.68%), Query Frame = 3
Query:  222 FAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFA-NRKKNNGVVWLS 1076
            FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F   R+K   +VWLS
Sbjct:  213 FAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 3.170e-102
Identity = 159/292 (54.45%), Postives = 204/292 (69.86%), Query Frame = 3
Query:  219 NFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNN-GVVWLSRPK 1085
            +FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKT +  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LE+VRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILH+MLH+ DGM   +E+V+W GSA L +   H  + D +SVG +   D  +      HA+LK +L  +F  RKK+   +VWLSR +
Sbjct:  165 HFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGH--NLDSSSVGTKDLNDKPQ--VEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKR 452          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 6.110e-102
Identity = 153/276 (55.43%), Postives = 193/276 (69.93%), Query Frame = 3
Query:  234 MFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKN 1055
            M++EHI+LPT      D V++ Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+ ++VTVDHAGRAI VT+GFTG+TNDKT V +DAAV+ IR +K Y ++ + +   DGT  T KGCY++VDNGYH+W  L+ PSKYP   +D  FSK LE+VRKDVECFFGILKGR RIL L +A+  +E IDN+FFTCCILH+MLH+FDGM    EN +W  SAG+       P+ D  SVG +      +      HA  K QL  SFA RKK+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQ--VEAGHAVRKRQLTTSFAYRKKH 274          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.270e-100
Identity = 163/286 (56.99%), Postives = 190/286 (66.43%), Query Frame = 3
Query:  219 NFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEY---------LFNPQHAKLKGQLIESF 1037
            +FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT + YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI H+MLH+FDG+ +F+EN DW GSAG HD  +  P  D+TSVG +    P  D E+               HA+LK QLIESF
Sbjct:  135 HFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392          
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 2.740e-99
Identity = 162/318 (50.94%), Postives = 202/318 (63.52%), Query Frame = 3
Query:  219 NFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNN-GVVWLSR 1079
            +FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKT V +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LE+VRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILH+MLH+FDGM    EN +W  SAG+       P+ D  SVG +   D  +     +H   K QL  SFA RKK+   +VWLSR
Sbjct:  123 HFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEI--EHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.44.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE4.560e-13364.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE7.020e-12253.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE2.410e-11958.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM6_9PHAE3.340e-11867.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.990e-11055.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE3.360e-10955.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE3.170e-10254.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI6.110e-10255.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K872_9PHAE1.270e-10056.99DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNX4_9PHAE2.740e-9950.94DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:181585..184403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1144
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.93e-103
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1035
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789973.6403024-UTR-P-littoralis_Contig20:181584..1816401680789973.6403024-UTR-P-littoralis_Contig20:181584..181640Pylaiella littoralis U1_48UTRP-littoralis_Contig20 181585..181640 -
1680789973.6836038-UTR-P-littoralis_Contig20:184350..1844031680789973.6836038-UTR-P-littoralis_Contig20:184350..184403Pylaiella littoralis U1_48UTRP-littoralis_Contig20 184351..184403 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789973.653036-CDS-P-littoralis_Contig20:181640..1820931680789973.653036-CDS-P-littoralis_Contig20:181640..182093Pylaiella littoralis U1_48CDSP-littoralis_Contig20 181641..182093 -
1680789973.66274-CDS-P-littoralis_Contig20:182667..1830841680789973.66274-CDS-P-littoralis_Contig20:182667..183084Pylaiella littoralis U1_48CDSP-littoralis_Contig20 182668..183084 -
1680789973.674604-CDS-P-littoralis_Contig20:184185..1843501680789973.674604-CDS-P-littoralis_Contig20:184185..184350Pylaiella littoralis U1_48CDSP-littoralis_Contig20 184186..184350 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.44.2prot_P-littoralis_Contig20.44.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 181641..184350 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.44.2

>prot_P-littoralis_Contig20.44.2 ID=prot_P-littoralis_Contig20.44.2|Name=mRNA_P-littoralis_Contig20.44.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MAQWAVVLEELGAATLWREEDDDDDVPRAKRTRCIKERKNWKQSAWWTQL
QEEELNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGW
GMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVR
YDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMA
PSKYPGDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLAYHCREDI
DNIFFTCCILHDMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSV
GPRPATDPEEYLFNPQHAKLKGQLIESFANRKKNNGVVWLSRPK*
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mRNA from alignment at P-littoralis_Contig20:181585..184403-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.44.2 ID=mRNA_P-littoralis_Contig20.44.2|Name=mRNA_P-littoralis_Contig20.44.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2819bp|location=Sequence derived from alignment at P-littoralis_Contig20:181585..184403- (Pylaiella littoralis U1_48)
TTGCCGCTCTCCACCACAGCGAGCAGCACGATCGACAAACACGCGTGCGC CCGATGGCACAGTGGGCTGTTGTACTCGAGGAGTTGGGTGCTGCTACTTT GTGGCGAGAGGAGGATGATGACGACGACGTGCCGCGTGCGAAGCGGACAA GATGCATCAAGGAGCGAAAGAACTGGAAGCAGTCTGCCTGGTGGACGCAA CTTCAGGAGGAAGAACTTGCCGTGCCCACGTCCGATGCGGCGAAGGTATT CCGAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGAGC TGTCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGC CGTGAGGGTATCCCAGTAGAGCTCAAGGTGCGCTTGAAAATGACACTTCG TCCGAAGCATAACATACTGGAAAATAATATAGATGGTGTGTGTACAAGTA TAAAATACAGCAGCTTTCCACTGCTGTACGTCACACAACTGCTGTCCACA GACCGCCGTCCCCCTCATGACTGCAGCACAACTGCTGCGCCTGACGAAAG TCTGCATGCCTTTCGGGGCCGGTATATCTGTGAAGCACTTGCAGCTGTAG GGTATGCGAGACAAATCAAATGCGCAACGATTTTTGTGGGACGACGAGGA CTAGCGAATTAACTATCTATTCTGGATAACAAAGTGCCGCAGACGGATAT CACCACAGCAGTGTGTGTTGCTGATGCTGCCGAAGATTCCGCTGCAGGTT TTTGGGTACTCTTCTGTGCCCCACTCCTGGGTCGGTGGTTATTACGAGGT ACTTATATTCCGAACCTTTCTTGATTGGTCGTTTCGGGTCGAGTGGATGC GGAAACACGGGAATGCAACCATACATGACTGCTGTACTGCTGTAGACTGG CTAGCAGAATAGATGGGATGGCAACACAACACAACAGTATTTATCACGCT TTCACGTAAAAAAAACATGCCGTTGCTGCGCCACCACGTGACGCTATTCC GACACAACAGCTGTCACGATGTGTGTATGTGTAAATCAAAACATCATCCG TAATACGAAATCATGTATCTGCCTGATTCGTATGCACGGACTACTTAAAA TGGTAGTTTTCCAGCCGAGCGAATCGGGCAACAGCAACTAGTTGACTGAT GGACACTCCCGCCCCCCCCTTTTCTCCCCGCCGCCGCGCGCCTGACATTA TTCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTC GACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAAC GTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATA TCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGC AAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGG TTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGG GGTTTCCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCGCGCC ATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGAACGT CCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGG ATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAA GGATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGG GGCCTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTGACGCT TCGGGTTGATGTGAAGCCCGAAAATTACACGCCGGTACACCGAAAGCAGA CCAATGCCATATTTGTCGGTACTGAATGAGAATCTTTATGGCATGTCGGC CCCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTGAAAAAC AATTTGCCGCTTCGCGTTCCTTCTATTTGTAGAGTTGTTTTCGTGCTGGT TCCGTTTGGACGGTTGCGTTCACTTTCTTACATTTCGAGCATACATTACC ACCCCATTTATAACACCAAAAGTTAAAAAAAACAAATCTGCTCAGGGATG GTCAGATGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTG TTCCACATGTCCACACGGTTCCTCGTTCCCCCCGAAGAGTTTGATCGTGA AAATATGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCACC AGTCGTCCCTTTCGACCCCCCCCCCTGCTACTGTTGTGCCGTCGTGTGCC AAATCAACAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACG TGGATGACGCGGCCTTCTCCAAGATGCTTGAAACTGTGCGCAAGGATGTG GAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCG CCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCT GCATTCTCCACGACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAG GAGAACGTCGATTGGGCAGGCAGCGCTGGTCTGCACGACCCCAAGGATCA CGCCCCAGACACGGACTTCACGTCGGTCGGGCCGAGGCCGGCAACCGACC CGGAGGAGTACTTGTTCAATCCGCAACATGCAAAGCTGAAGGGCCAGCTT ATCGAGAGTTTTGCCAACCGCAAGAAAAACAATGGCGTTGTCTGGCTCTC TAGGCCCAAGTAGAGTTGAGGTGATTAGGGTGATGCCGTAATGTTGCGAG TAAACGACCCGGGCCGCCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:181585..184403-

>mRNA_P-littoralis_Contig20.44.2 ID=mRNA_P-littoralis_Contig20.44.2|Name=mRNA_P-littoralis_Contig20.44.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig20:181585..184403- (Pylaiella littoralis U1_48)
ATGGCACAGTGGGCTGTTGTACTCGAGGAGTTGGGTGCTGCTACTTTGTG
GCGAGAGGAGGATGATGACGACGACGTGCCGCGTGCGAAGCGGACAAGAT
GCATCAAGGAGCGAAAGAACTGGAAGCAGTCTGCCTGGTGGACGCAACTT
CAGGAGGAAGAACTTAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTA
CCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCAAAC
TGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGTTGG
GGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTT
TCCAACCCTGGCGTTCGAGGTTACTGTCGACCACGCGGGCCGCGCCATTG
GCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGAACGTCCGC
TACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCG
AGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAGGAT
GCTATTTGATCGTCGACAACGGCTATCACGAGTGGGTCACCCTCATGGCC
CCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCT
TGAAACTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGC
GCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGACATC
GATAACATCTTCTTCACGTGCTGCATTCTCCACGACATGCTCCACTCCTT
CGACGGCATGAGCGTGTTCAAGGAGAACGTCGATTGGGCAGGCAGCGCTG
GTCTGCACGACCCCAAGGATCACGCCCCAGACACGGACTTCACGTCGGTC
GGGCCGAGGCCGGCAACCGACCCGGAGGAGTACTTGTTCAATCCGCAACA
TGCAAAGCTGAAGGGCCAGCTTATCGAGAGTTTTGCCAACCGCAAGAAAA
ACAATGGCGTTGTCTGGCTCTCTAGGCCCAAGTAG
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