mRNA_P-littoralis_Contig20.30.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.30.1
Unique NamemRNA_P-littoralis_Contig20.30.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A836CQJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQJ0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.730e-36
Identity = 77/175 (44.00%), Postives = 109/175 (62.29%), Query Frame = 3 
Query:  339 IEQELEGVPWLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVL-----------GCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDEL-QLAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASKSCDDEPSRRLYS 827
            +EQ +EG PWLSPFLP+  A + +F+  + + +DD+++D+GCGDGR    L                  G+GVD+S  C+A+A+ +A AEGV++LL WH TD T  G  + L Q    TVV+LYVYPTLL QL  ++ RL ++GA V T+QYH   +GW A  + D  PS RL++
Sbjct:    1 MEQAIEGKPWLSPFLPTCAADIVAFLDFAAVTADDIIVDIGCGDGRHCQGLTLPAPPAAXXXXDDTASGGVGVDVSDECVATARGMAEAEGVADLLQWHATDITGQGHDEVLEQNGPPTVVYLYVYPTLLTQLRPVVRRLCERGAHVVTVQYHF--DGWRARAARDGPPSMRLHA 173
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A7S4D9T4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T4_HETAK)

HSP 1 Score: 142 bits (358), Expect = 6.340e-35
Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 3 
Query:  270 AFSLRDKYLCQCHDLEEEHLDQAIEQELEGVPWLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDELQ--LAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASKSCDDEPSRRLYS 827
            A  L  KY  + ++LEE H D  IE ELEG   LSPFLP+    + +F Q S L   DV+LD+GCGDGRVL++ AK +GC+ IGVDI++ CI  AK IA  EGV   + + C D+T     + L+  L   TV++LYVYPTLL +LE +++    +  RV T  YHL    +  SK  D+     LYS
Sbjct:   85 AAELEHKYSHRFNELEEFHFDYMIESELEGNRILSPFLPTKAGDIDAFFQFSGLIHSDVLLDIGCGDGRVLISAAKTIGCQCIGVDITKECIELAKSIAKIEGVESQVQFLCVDATTNDFQNALEENLGEITVLYLYVYPTLLKRLEGVVSYFLARNVRVITQTYHLDCCSFSQSK-VDESSKLVLYS 271
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: B7FSM9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSM9_PHATC)

HSP 1 Score: 112 bits (281), Expect = 1.660e-24
Identity = 67/162 (41.36%), Postives = 97/162 (59.88%), Query Frame = 3 
Query:  369 LSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDST------RPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRLRKKG-ARVFTLQYHLTGEGWEASKSCDDEPSRRLYSAV 833
            LSP++P++ A +  FV+ + L   DV+LD+GCGDGR+ V+ A++ GCR +G+D+S  CIA A+E+A  E + + LS+   D+T            E  L   TV+FLY YPTLL +L  LL +  + G ARV TL YHL+      +K  D+E    LY+ V
Sbjct:   85 LSPYVPTTAAKIAKFVEFASLLESDVLLDIGCGDGRICVSAARLSGCRAVGIDVSPLCIAMARELAREENLEDRLSFFEADATIDPKRLLQSPLLESDLKDVTVIFLYTYPTLLGRLFPLLAKFTENGKARVVTLTYHLSQSMANIAKR-DEEFDLCLYNRV 245
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: W7TQE1_9STRA (Rna methylase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.530e-19
Identity = 72/186 (38.71%), Postives = 98/186 (52.69%), Query Frame = 3 
Query:  288 KYLCQCHDLEEEHLDQAIEQELEGVP--WLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELL----SWHCTDSTRPGVFDEL--------QLAA--------TTVVFLYVYPTLLVQLEALLTRLRK-----KGARVFTLQYHL 764
            +++ +   LE+ HLD  I++    V    LSPFLP++   + S   +  L    +++D+GCGDGR L+  A +  CRG+GVDISQ CIA AK I S EG+S+ +     W    S +  V + L        Q AA          VVFLYVYPTLL +L  LL RL +     +   V TL YHL
Sbjct:   21 RHVKETEALEDSHLDSCIDEAAIQVQRHTLSPFLPTAAEDLASIFNILRLGPRHIMVDLGCGDGRPLIAAALLCKCRGVGVDISQQCIALAKSIVSQEGLSDRMVAFFRWDLL-SDQEAVLNRLVEAVEAKAQEAAIECKDGVEAVVVFLYVYPTLLARLVCLLDRLVRAWRDFRRVEVVTLTYHL 205
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A7S1TS12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS12_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.240e-18
Identity = 69/209 (33.01%), Postives = 109/209 (52.15%), Query Frame = 3 
Query:  216 GQGADELSPSLLSLVVDIAFSLRDKYLCQ-----CHDLEEEHLDQAI----EQELE------GVPWLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASA-------EGVSELLSWHCTDSTRPGVFDELQLAATTVVFLYVYPTLLVQLEALLT-RLRKKG---ARVFTLQYHL 764
            G G D    ++ +   + A   R   +C      C +LE+ H +  +    E+E E      G   LSPFLP+ P  +  F+++  + + DV+LD+GCGDGRV + +A V  C  +G+DIS+ CI +A+   +A       +  +  ++W   D  +  V     + A TV++LYVYPTL+ +LE L+   L   G   ARV T++YHL
Sbjct:   39 GPGVDRARGAMSAAAGEDALERRVAEICDELQAACDELEDAHHEATLFMVGEEEGEEAAAHGGAAMLSPFLPTRPGDLVDFLRIGGVGASDVLLDIGCGDGRVALAVAAVRHCAVVGLDISKLCIDAARSAEAALTVKLGADAFAAGVTWLHADFLKEEVRALESVRAATVLYLYVYPTLIEKLEPLVRDMLLNDGFALARVVTVEYHL 247
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A7S2R6G4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6G4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.340e-18
Identity = 65/177 (36.72%), Postives = 93/177 (52.54%), Query Frame = 3 
Query:  312 LEEEHLDQAI-----EQELEGVPWLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASA-----KEIASAEGVSELLSWHCTDST-----RPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRL-RKKGARVFTLQYHLTGEGWEASKS 794
            LE+ HLD  +     E  ++G   LSPFLPS P A+ + +Q+      DV+LDVGCGDGRVL ++    GCRG+GVD+S  CI +A     +E A      E L++   D        P + D   +   TV +LY+YPTLL  +   L  L R++  R+ T  YH   + W   ++
Sbjct:   25 LEQVHLDWTLDVSLDEDAVDGPQVLSPFLPSQPPAIEALLQLLPWSPGDVLLDVGCGDGRVLTSMTLAKGCRGVGVDVSPDCIDAANAMWDEEAARTSKDRESLAFVLGDCVVDRKLLPRLTD---VHHVTVCYLYIYPTLLKSIRPDLEDLSRERQVRIVTAGYHF--DDWPVERA 196
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A7S2SPV3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPV3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.200e-18
Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 3 
Query:  366 WLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSE----LLSWHCTDSTRPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRL--RKKGARVFTLQYHLTGEGWE 782
            W+ P+ PS   ++ +F + + +   DV+LD+GCGDGRVL  +    GC GIG+D+S  C+  A+ I+ AEG       +++  C   T P       L+A T++++Y+ P  LVQ+E L+ +L  + K  RV+T +YH   + WE
Sbjct:   83 WVCPWQPSDINSIDAFTKFAKVSHHDVLLDLGCGDGRVLTRVCSQTGCNGIGIDVSLECVNLARHISEAEGQGGRARFVVADFCNCETLP------DLSAVTLIYIYLVPKALVQVEPLVKQLCAQHKSMRVYTYEYHF--KDWE 219
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A1S9AHI7_9BURK (SAM-dependent methyltransferase n=1 Tax=Massilia sp. KIM TaxID=1955422 RepID=A0A1S9AHI7_9BURK)

HSP 1 Score: 87.4 bits (215), Expect = 3.760e-16
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 3 
Query:  375 PFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASKSCDDEPSRRLY 824
            P++P+    +   + ++ +  +DV+ D+GCGDGR++VT AK  G RG G+D+  A IA AKEIA   GVS+  S+   D  +  V +       TVV LY+ PT+ V+L   L +  K G RV +  + + G  W   K+ + +  RR+Y
Sbjct:   44 PYVPTPQEVVDKMLDLAKVGKNDVLYDLGCGDGRIVVTAAKNRGARGTGIDLDPARIAEAKEIAKKAGVSDRASFRVGDLFKTDVSE------ATVVTLYLLPTVNVKLRPQLWKQLKVGTRVVSHAFDM-GPEWPPEKTAEVD-GRRIY 185
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A7C5YGM3_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5YGM3_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 4.920e-16
Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 3 
Query:  357 GVPWLS--PFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASK 791
            G P +S  PF+P+    +   ++++++  +D+V D+GCGDGR+++  AK  G RG+G+DI    I   KE A AEGV++ + +   D+ +  + D       TVV LYV P  +++L   L R  K G R+ +  Y + G+ WEA K
Sbjct:   29 GQPEVSFGPFVPTPMPVVEEMLKLANVTKEDIVYDLGCGDGRIVIMAAKKFGARGVGIDIDAGLIEKCKESAKAEGVADKVRFIAEDAMKSNISD------ATVVTLYVLPNAMLKLRPKLLRELKPGVRIVSHNYSM-GD-WEADK 167
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BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Match: A0A3N5ZUE7_9BACT (Methyltransferase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5ZUE7_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 1.290e-15
Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 3 
Query:  369 LSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLAKVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDELQLAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASKSCDDEPSR 815
            L+P++P+    +   +Q++ +  DDVV D+GCGDGR++VT AK  G RG+GVDI    IA +   A   GV +L+S+   D+ +  V      +  TVV LY+     ++L  +LTR  K GAR+ +  + + G+ WE  K    + SR
Sbjct:   41 LAPYVPTPDDVVDRLLQLASVTKDDVVYDLGCGDGRIVVTAAKKYGARGVGVDIDPQRIAESNANAKQAGVEKLVSFKLEDAMKVDV------SQATVVTLYLLSASNLKLRPILTRQLKPGARIVSHAFSM-GD-WEPLKVDQFQDSR 181
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQJ0_9STRA9.730e-3644.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D9T4_HETAK6.340e-3544.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7FSM9_PHATC1.660e-2441.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7TQE1_9STRA1.530e-1938.71Rna methylase n=2 Tax=Nannochloropsis gaditana Tax... [more]
A0A7S1TS12_9STRA1.240e-1833.01Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2R6G4_9STRA4.340e-1836.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SPV3_9STRA8.200e-1835.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A1S9AHI7_9BURK3.760e-1636.00SAM-dependent methyltransferase n=1 Tax=Massilia s... [more]
A0A7C5YGM3_9BACT4.920e-1635.37Class I SAM-dependent methyltransferase n=1 Tax=Ar... [more]
A0A3N5ZUE7_9BACT1.290e-1536.24Methyltransferase domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:138019..142394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr32792
PFAMsDOT1,Methyltransf_31
Model size1665
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.43e-28
EggNOG OGs2E708@1|root,2SDNE@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-17_004060.1
Cds size648
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.30.1prot_P-littoralis_Contig20.30.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 138213..141571 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789973.3101363-UTR-P-littoralis_Contig20:138018..1382121680789973.3101363-UTR-P-littoralis_Contig20:138018..138212Pylaiella littoralis U1_48UTRP-littoralis_Contig20 138019..138212 +
1680789973.520526-UTR-P-littoralis_Contig20:141571..1423941680789973.520526-UTR-P-littoralis_Contig20:141571..142394Pylaiella littoralis U1_48UTRP-littoralis_Contig20 141572..142394 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789973.323405-CDS-P-littoralis_Contig20:138212..1383681680789973.323405-CDS-P-littoralis_Contig20:138212..138368Pylaiella littoralis U1_48CDSP-littoralis_Contig20 138213..138368 +
1680789973.3342617-CDS-P-littoralis_Contig20:139065..1391411680789973.3342617-CDS-P-littoralis_Contig20:139065..139141Pylaiella littoralis U1_48CDSP-littoralis_Contig20 139066..139141 +
1680789973.371867-CDS-P-littoralis_Contig20:139945..1400551680789973.371867-CDS-P-littoralis_Contig20:139945..140055Pylaiella littoralis U1_48CDSP-littoralis_Contig20 139946..140055 +
1680789973.4775221-CDS-P-littoralis_Contig20:140522..1406901680789973.4775221-CDS-P-littoralis_Contig20:140522..140690Pylaiella littoralis U1_48CDSP-littoralis_Contig20 140523..140690 +
1680789973.5092547-CDS-P-littoralis_Contig20:141433..1415711680789973.5092547-CDS-P-littoralis_Contig20:141433..141571Pylaiella littoralis U1_48CDSP-littoralis_Contig20 141434..141571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.30.1

>prot_P-littoralis_Contig20.30.1 ID=prot_P-littoralis_Contig20.30.1|Name=mRNA_P-littoralis_Contig20.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
MASDSAEGQGADELSPSLLSLVVDIAFSLRDKYLCQCHDLEEEHLDQAIE
QELEGVPWLSPFLPSSPAAMHSFVQMSDLRSDDVVLDVGCGDGRVLVTLA
KVLGCRGIGVDISQACIASAKEIASAEGVSELLSWHCTDSTRPGVFDELQ
LAATTVVFLYVYPTLLVQLEALLTRLRKKGARVFTLQYHLTGEGWEASKS
CDDEPSRRLYSAVAA*
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mRNA from alignment at P-littoralis_Contig20:138019..142394+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.30.1 ID=mRNA_P-littoralis_Contig20.30.1|Name=mRNA_P-littoralis_Contig20.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4376bp|location=Sequence derived from alignment at P-littoralis_Contig20:138019..142394+ (Pylaiella littoralis U1_48)
CTTGATTGGCTTGGGCGTTCATTTACTACTGTAGAGCTATTTAGCTCTTA
AGCTAGACTTACAACATCAAAGCCCGGCTGCCACGTACTGCGTGAAGTGT
GGAGCATACGCTGTCGTACGTATCAGCTGGTATACATGCACCCGCTCACG
CCTGTTGACAGCAACTCTACACCCACGCCACTGCTGCTGTAACCATGGCG
AGTGACAGCGCGGAGGGACAGGGCGCTGATGAGCTCAGTCCTTCTCTTCT
CAGTCTCGTCGTCGATATTGCTTTTTCATTGCGAGATAAGTACCTCTGCC
AGTGCCACGACCTAGAGGAGGAACATCTGGATCAAGCAATCGAGCAAGAG
GCAAGAGAGTTGGCGTTCCCTAGGTCGCAAAGCTGGATTGCAGTGTTCTA
CCAGAGAGAGGGTGCCACCAACACACCATCAAACGATGTCTACATTGTTG
TCGGAAAGCTCTCAACGAGTTGAATCATTCTAACGCCCATCACCCTTTTC
GGCATCGACACTCTCTTCGAATGTCAACAAAGAGGACCGAAAGAGAAGTT
TCAGAATCGGCTACGGGGGGGGGGGCACGTGTGTTACCAGAGCCAACGTA
GAAACAAATGGACGAATGTGTACCAGTAGGGGTACCAACAGGTGCCCTAA
AAAACGGAAGCTGCATATGATACATATGATCACGGTAGATCTATCGTCTA
CTCCTTCAATTTGGTTGCTTTTTTACTTGCCCAACTCACATCCATGTCTG
CTTCAGATCGTTTTGTAGGCAAGCGCGAGATTTTAAAAGCTGTCTGTCTT
CGCTGCCGTCCATATAGGCTTGTCCAGTCCAGCCGGGCGCCACGCGTACA
CACGTCAGATCGCAGTTAATACTTCTTGCCTCTGAAACAGGTTTCGTTAT
AGGTGAAGGCAACCTACCTGCGATTGAGGTGTAACGCCCGTACCATGCAA
GATCAACGTACGGTAACAAACACGTTGGTTGGTGACTCGATTTGGGCCGC
CCGCCGCCGTTCCCACCCCTCGTGACACCGCTGCGTGTGTTGGATAGCTA
GAGGGTGTACCATGGCTGAGCCCCTTCCTGCCTTCTTCACCCGCAGCCAT
GCATTCCTTCGTTCAAATGTCAGGTAAGCGCGAAAACTCTAGCGCGAAGT
CTATCGATGAGTGTTGTGATTTATAATGCTGTGCCGCACACAAAAATGGT
CACACAACTCCGGATACCGCACACCTTAAACGCAGTATCAAATGCTCCCT
CTCCGAGGTAAACGCCATTGGGAGCCTTTGTCTTTTTTTAAAACGTAGCG
CCACACGGAACGTCCACCCCACCCGATCTTCATTGTACAAGGTTCAAGTG
CCTCAAAGTCTCGAATAGCCTTCGCTGCAGCATTGGCTGCTTGTTTGTCG
CCTACTGCGCCCACCTCTTGTACAGGGCCCGTGTGGCCCCTGTCCAACCT
CGAAGTGACCCCTTTTTTCAGTTTCCCATTGTAGCGTCGGTGAAAGTATT
GGCATCGGTCTTGAGTTGCATCGCCACATGTCGTGCCATGGATACGAGGG
ACACCACCAGCGGGAGGGAGACTGACATCAGCAACCGTTGCAAGTACCTA
CACGTTGCTGGAGTTCTGTGTAGTATTTGATCACCACGTAAAAGAGGGCT
CGTGGCAGACGATACTTTGTGGATGGTGTGTTGTTTTCGTGTCGGGTACG
GTGGCGGGCGCGCGCTTGTTTTGCGTTTTGCATCCCTTCGGTCGTCATTC
CTTTCGGTTGTTCCTTCCCCCAAAACACCCCACTGTCCATGCTTGCCCCA
ATCAACGACGGTCAGAACACAAGGGTTTGGATATTTACCATCCTTCCTCC
TGTGCATAGTTATGCGTGAACCATCACACACCCGCCGGCTGTGGCATTTT
TGCTTTCCCTTGTTTCTTTTTTGACAGATCTCAGGTCGGATGACGTGGTT
CTGGACGTGGGCTGCGGGGATGGACGCGTTCTAGTGACGCTGGCGAAGGT
TCTCGGATGTCGGGGAATAGGTGTCGACATCTCGCAGGTATAGCCAGCAG
CCAGCTCCCTTATTGAACAAGACGCGCAGTTTGCTTCCACCGCCGCACGG
AGCAGTACCGATATTTCACATGCCGATCATCATGTACGGAGCGCCTGGTA
GGGGATTCGAAATGCCAACAGCCGGCAGGTACCCTCACCAATCTCAGTAC
CTGACCCTGCCTCACTGCATCGACGTACAGCACCCAGGGGGTAGTATTCG
AGACCGAAGCTACTACTGCTGGTTGTGCTCTATCGCTCTCGAACACGGCG
CTTCCTTTCGACACGCTTGCTCGCTGCATTTATTCACGAGTGCAAGAAAT
GCCCCTTCGTCGATTCGAATCAAACCCCCTCCCCCCTTTTTGCGAACAAA
ATAAATCGCTTTGCTGTCGCGTCGTCCCGCTTGCTGCATGCACTTCGCAT
TTTGTTGTCGGCGCCCGCCCGCCATCGATCGGGCCACCCGCACGACAAGA
AAAGGCTTGCATAGCCTCGGCCAAAGAAATCGCCAGCGCAGAAGGGGTAT
CCGAGCTACTTTCTTGGCATTGCACAGACTCTACCCGCCCCGGGGTGTTT
GACGAGTTGCAGCTGGCAGCGACTACTGTTGTATTTCTGTACGTGTATCC
CACGCTTCTCGTTCAACTTGAGGTGGGCTTCTCAGTTTTGATACAGGATG
TATCTCACAGCTATCCTGTGACGAACAGACTCATTCATTTTCTTGAAGGG
TAACGAATACGACGATTGGTTTTCCGTTATTTTTGATGCAAAGAAGAGGC
GTGCATTTCGGGCACCCCAGCGCAATTTTGATTTTAAGTAAGCGCATCTT
CGTCTTGTGTACGACGGGCGATCCTCACGTTTATGATCCTCGCTACTCGA
TGCAGTAACCAGCGTGCATGCTCAGTCGTCTCCTCGATCACGCCACATCA
GAGCCTGCCCGTCTACATTATTGCTGATTTATTTTTCCTCCTCTCGTACC
CAAGCGTTTGTGACATGGCTAGTATACCTATGGTGAGAGTCGGTGCGAGG
AGACACGCGAGTGTCTGCAGTTTCCCTAACGGAACCTTGCTCTCTACACC
TTGCTCCGTAGCATGATTGCTCGACGTCGTCAAGCACCAACCCGATTGCG
ACTGCCGTTGAGCTACGAAAACGAAGTATTAATTTCCGCTAGCAGTATGA
TTCGCCTTATTTCCTCGGCGGAGAAATCAAGGAAAATGTATAGCGCTTTC
AAGTGTAACAAGTTCGATTGCGGGGCTCGATCTCCACGAGGCGCACCGCA
TACTGTGTTCGACTGCCTTGTTCCTGACAAGTTCGAGCCCCCAAATTTCT
CGTCGTGCCACCCTGATCGGTACGGCTTTACCCCCCAACCACGTGTCTCC
CTGTCGCGCCCACAGGCGTTGCTCACGAGGCTCAGAAAAAAAGGAGCCAG
AGTGTTCACCCTCCAGTACCACCTTACCGGCGAAGGTTGGGAGGCATCAA
AATCGTGCGATGACGAGCCGAGTAGGCGACTCTATTCGGCGGTAGCAGCT
TAAGCGACGTATATAGGTACCCTGGTATTCTTCTTGTCTTCCTGCGTTGG
TTATTTTGATCCCATGCACAAATGAAGCGTTGGGATATCTGAACACTCGC
TGTCCTGATGCTGAGAGCGAGAGGGGGAGACGGGGGTACGGTCTAAGTTG
GCGGGAAAAAACACACAGCTTCATTATCAGCTTCGGTCGCACGCGAAGTT
ACTGCCCACATCTTGTCTTGTTGGCAAAGTTGTTTGTCAAATTTGGATTC
CCACGCGGGTTGTCGTGTGAATTTTGTTCCGCCAAATTCGACTGCATGTA
AATTCGTCACCATGTAGCTAGGGACTTTTACTGCTAGGAGCTGTCTCAGT
CTGTGTTCAAACGCGAAGGAAACTACGCCCGATAAAACAAGGGCTCCCCA
GTGTGATGGAAGAGAGCGAGACTGCTCTGCGGTGAGAAATACGATCAAGT
ACCGATACATACGCGGTTGTATGGTCATCCTTCTCGCATCCCCCATGAGG
GAAGATGTGAAAGCAAAGAGGCATCACACGTTGAATGCCCCACCGCCAAC
TCAGCAGAAGCAGAAAAACAAAGCAAAAGCTTTGCGGCGAGAAATGAAAC
GACAAATGTGGTGGGGAGTGTGGGCATCACCTCGCCTTCCATCTGGCGTA
AGGTGTGGAAGAAAGGAAGGATCACACGTTCATGCCCCAACGCCTATAAA
CGCAGCAGATACACAGTACAAAAAGGCAGAACGAACGGCAGTAATGATTT
GCCGGTCATCGAGCCCAACGCATCACCGGAAAGGAAATATTCCGCAAGCG
CACACGACTCTAGGGCGGTCAACACC
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:138019..142394+

>mRNA_P-littoralis_Contig20.30.1 ID=mRNA_P-littoralis_Contig20.30.1|Name=mRNA_P-littoralis_Contig20.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig20:138019..142394+ (Pylaiella littoralis U1_48)
ATGGCGAGTGACAGCGCGGAGGGACAGGGCGCTGATGAGCTCAGTCCTTC
TCTTCTCAGTCTCGTCGTCGATATTGCTTTTTCATTGCGAGATAAGTACC
TCTGCCAGTGCCACGACCTAGAGGAGGAACATCTGGATCAAGCAATCGAG
CAAGAGCTAGAGGGTGTACCATGGCTGAGCCCCTTCCTGCCTTCTTCACC
CGCAGCCATGCATTCCTTCGTTCAAATGTCAGATCTCAGGTCGGATGACG
TGGTTCTGGACGTGGGCTGCGGGGATGGACGCGTTCTAGTGACGCTGGCG
AAGGTTCTCGGATGTCGGGGAATAGGTGTCGACATCTCGCAGGCTTGCAT
AGCCTCGGCCAAAGAAATCGCCAGCGCAGAAGGGGTATCCGAGCTACTTT
CTTGGCATTGCACAGACTCTACCCGCCCCGGGGTGTTTGACGAGTTGCAG
CTGGCAGCGACTACTGTTGTATTTCTGTACGTGTATCCCACGCTTCTCGT
TCAACTTGAGGCGTTGCTCACGAGGCTCAGAAAAAAAGGAGCCAGAGTGT
TCACCCTCCAGTACCACCTTACCGGCGAAGGTTGGGAGGCATCAAAATCG
TGCGATGACGAGCCGAGTAGGCGACTCTATTCGGCGGTAGCAGCTTAA
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