mRNA_P-littoralis_Contig20.24.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.24.1
Unique NamemRNA_P-littoralis_Contig20.24.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 333 bits (854), Expect = 5.430e-107
Identity = 182/406 (44.83%), Postives = 250/406 (61.58%), Query Frame = 1
Query:   43 NFNDPEKDEVTRFLLA-GSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTKCAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            N    E+ +V+  LL   S  G L HG++K  A++F   W TI R+W+R +   E+      + +  +  SGRK     +L  R+  IP  DRTT +R+A+ + +P T+LHR  K   L  HS+ LKP LT   K  RL+W  ++V      G   V  D   +VH+DEKWFY+ +  +  YL   E PP R  QSKRFITKVMF++AVARPR N   +  F+GK+G W FTE VPA RNSRNR +GTLVT    V+++TY+  L+  VIPAIK KWP A R++ I +QQDNA+PH     + +L  C +DG+DI +  QPPNSPD N+LDLGFF +IQSLQ+RTR RTID+LI+   +AW +   + L   +++LQ+CM + +  GG N YK+ H+ K    + G
Sbjct:    7 NLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRKK-KYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV------GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQG 404          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 319 bits (818), Expect = 5.150e-102
Identity = 180/406 (44.33%), Postives = 238/406 (58.62%), Query Frame = 1
Query:   43 NFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTKCAE-VTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            N    ++  +  FLL  S  G +  G    A  K+     TI RLW  +            L +G  G  GRK I  +EL+ ++R IPL+ R T + LAAALGV  T + R LK    R HS+ +KP LT E +  R+++ L    T    GG  V  D  D VH+DEKWF    D + +YL  DE  PVR+ QSKRFI+K MFIAAVARPR++      F+GK+G+WAF E+  A R S+NR  GT+V +  E V +E YKA  I  +IPAIK KWP + +  TI++QQDNAKPH   D  D++    S G+DIR+  QPPNSPD N+LDLG+F SIQSLQ +T  R ++ L+  V +A+ A     L K++++LQTCME I+   G N YK  H GKD   +AG
Sbjct:    5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALS--HTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAG 408          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 318 bits (815), Expect = 1.070e-101
Identity = 178/417 (42.69%), Postives = 261/417 (62.59%), Query Frame = 1
Query:   16 SASQVAKRKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGRR--GKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTKC-AEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            S++    +K   + ++ ++   LL  S +G L+ G     A+ F    ++++R+W+R     E GVA   +   RR  G+ GRK I  +    ++ ++PL  RT+ R LA A+ VP TTL R +K   +R H+ A+KP+LT EGK+ RLR+    +  ++ A    V  +  ++VH+DEKWF+L ++ +++YL   E  P+R  +SKRFITKVMF+AAVARPR +   N  F+GK+G++ FT K PA R+S+N  AGTL TK    VTKE  ++ LI+ V+PAI+ KWP    + TIF+QQDNAKPH      + ++    DGFDIRL  QPPNSPD N+LDL +F SIQSLQ +    TID+L++ VE ++E  AP  L ++++SLQ CM +I+   G N YK  H+GK+K  R+G
Sbjct:    8 SSAHPISQKKLTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENGVA---VDVSRRLHGRVGRKRIHFDV--NKVSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDP-VFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPHYDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGGNHYKQPHLGKNKLMRSG 418          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 316 bits (810), Expect = 5.030e-101
Identity = 181/410 (44.15%), Postives = 252/410 (61.46%), Query Frame = 1
Query:   37 RKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGRRGKS-GRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTK-CAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPH-RVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            +KN    ++  +   LL  S  G LQ GA    A +F     T+ R+W +   Q   G+  P + +    K  GRK + ++  Q  + DIPL  R+  R LA  L V  +T+HR +K   LR H+NA+KP LT E KR RL + L  + + + +      HD  + +H+DEKWFY+ K  +++YL   E  P+R  QSK+FITKVMF+AAVARPR + + N  F+GK+G++ FT   PA R+S+NR AGTL TK    VTKE  ++ LIE V+P I+ KWP +     IF+QQDNAKPH  VND++  LE  S DGFDIRL  QP NSPD N+LDLGFF +IQSLQ++    TID+L+  V+TA+E     +L  V+++LQTCM +I+   G N Y++ H+GK++  R G
Sbjct:   10 KKNTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGL--PVVLSSNMAKVVGRKRVQVDFNQ--VLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKI-SRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRS-HVGPIFIQQDNAKPHIDVNDNE-FLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREG 412          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663)

HSP 1 Score: 312 bits (800), Expect = 7.420e-100
Identity = 177/397 (44.58%), Postives = 246/397 (61.96%), Query Frame = 1
Query:   79 FLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWR--RYDVQHEAGV-ASPKLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTK-CAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
             L+     G LQHG  K  A  F     TI R+W   +  +QH + V  S K+        GRK I ++   A++  IPL  R   R +A A+ V  +T+HR +K   LR H+NA+KP LT + K+ RL + L  V        S   HD  + +H+DEKWFY+ K  +++YL  +EI P+R  +SK+FITKVMF+AAVARPR + + N  F+GK+G++ FT   PA R+S+NR AGTL+TK    VTKE  ++ LIE V+PAI+ KWP    +  IF+QQDNAKPH   +  +  +E S DGFDIRL  QPPNSPD N+LDLGFF +IQSLQ++    +ID+L+S V+T++E     +L  V+++LQTCM++I+   G N Y+  H+GK K  R G
Sbjct:    1 MLMQQIVDGKLQHGTLKHVATLFSVSKRTISRIWHDAKLQLQHGSLVDVSSKMAN----VVGRKRIQID--YAQVSQIPLRRRKNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVTR------SLTFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPR-DHTGPIFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQG 384          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR)

HSP 1 Score: 314 bits (804), Expect = 5.100e-99
Identity = 181/424 (42.69%), Postives = 251/424 (59.20%), Query Frame = 1
Query:    1 MSAAGSASQVAKRKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGRRGKSGRKGIP--LEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHD-FEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTK-CAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQIL-LCGGENTYKLQHVGKDKAARAG 1257
            ++A+ +  Q  K+KNF    K  +   LL     G L  G     AE F     ++ R+W        A    P L+     + GRK I   LE+++    DIP   RT  R LA AL V  ++LHR +K   LR HSN +KPYL+ + K+ RL++ L  +     A  S+   D   D +H+DEKWFY+ K  Q++YL+  E  P R  +SKRF+ K+MF+AAVARPR++   N  FNGK+G+W F  K PA RNS+NR AGTL TK    +TK+  ++ LIE ++PAI+EKWP ++ S  IF+QQDNAKPH   +  + +E    DGFDIRL  QP NSPD N+LDLGFF +I SLQ +    TID+ +S VE A++      L KV+++LQ CM +++ +CGG N YK+ H+ K+K  R G
Sbjct:   81 IAASENTRQPMKKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRKKIQVNLEDIK----DIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLA--SKFSFDNMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKWPCSS-SKMIFIQQDNAKPHLGINDDEFVEAAKIDGFDIRLCCQPANSPDMNVLDLGFFRAIDSLQHQKAPSTIDEFVSAVEKAFDMFPSEDLNKVFLTLQLCMVEVIKICGGNN-YKIPHMNKEKYVRNG 496          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS)

HSP 1 Score: 311 bits (796), Expect = 8.410e-99
Identity = 172/405 (42.47%), Postives = 248/405 (61.23%), Query Frame = 1
Query:   34 KRKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVA---SPKLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTKCA-EVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGK 1236
            +++N  D ++ E+   L + S  G L+ G  K  A  +     T++++ ++ +     G+    SP L    RG+ GRK + L+    ++  +P + RT  R +A AL VP TT+HR +K   +R H+N LKP L+ EGKR RL++ L  +  ++         +  ++VH+DEKWF++ K+ +++YL   E  P+R  +SK FITKVMF+AAVARPR +   N  F+GK+G++ FT K PA R S+NR AGTL TK    VTKE  +  LIE V+PAI+ KWP      TI +QQDNA+PH      + LEE S DGFDIRL  QPPNSPD N+LDLGFF +IQSLQ +   + ID+L+S V +A+E  +P  L  V+++LQ CM +I+   G   YK+ H+GK
Sbjct:   14 EKRNLTDQQRREILEILFSKSASGKLKRGCLKEVAAMYSVDPRTVRQIVQKANSCIAKGLTVDVSPNL----RGRVGRKRVQLD--LNKIAALPYSQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCLSMLEPSSLQS-QPTFKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHFITKVMFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKWPRGNGIETILIQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQACMIEIMKVNGGIGYKVPHIGK 411          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A1R3KDY3_9ROSI (Transposase, Tc1-like protein n=2 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KDY3_9ROSI)

HSP 1 Score: 310 bits (794), Expect = 1.680e-98
Identity = 172/397 (43.32%), Postives = 244/397 (61.46%), Query Frame = 1
Query:   58 EKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASP-KLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTK-CAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDK 1242
            EK+ +   LL  S  G L+ G+ K  A  F     T++R+W   + +    V  P  L++   GK GRK + ++     +  IPL  RT  R LA AL +P TT++R +K   ++ HSNA+KP+LT + K  RL++ L  +          +  D  D+VH+DEKWF++ K  +++YL   E+ P R  +SKRFI KVMF+A VARPR    +N  FNGK+G++ F  + PA RNS+NR  GTL TK  A +TKE  +  LIE V+PAI+EKWP    S TI++QQDNAKPH  ++  + LE    DGFDIRL NQPPNSPD N+LDLGFF +IQ+LQ +    T+ +L+S VE +++   P  L  V++SLQ CM +++   G N Y+L+HV K++
Sbjct:   22 EKEHILAVLLEQSKDGKLKWGSIKADATSFNTSARTVRRIW--LEAKRALSVGEPVDLSSKAIGKVGRKRVEIDVND--IAKIPLRRRTNLRSLAQALNMPKTTVYRRVKEGLVKPHSNAIKPFLTEQNKMVRLKFCLSMLNNGTLYNNP-IFVDMYDYVHIDEKWFFMSKTTERYYLLPWEVEPHRTCKSKRFIPKVMFMAVVARPRFVKESNQFFNGKIGIFPFVYQEPAKRNSKNRRVGTLETKPIASITKEVTRKCLIENVLPAIREKWPEYG-SKTIYIQQDNAKPHIDSNDAEFLEAARRDGFDIRLTNQPPNSPDLNVLDLGFFRAIQALQYQEAPNTVAELVSVVERSFDRLPPESLNNVFLSLQLCMIEVMKVLGGNNYRLKHVNKNR 412          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC)

HSP 1 Score: 315 bits (806), Expect = 3.160e-98
Identity = 179/411 (43.55%), Postives = 252/411 (61.31%), Query Frame = 1
Query:   37 RKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFGYCWETIKRLWR--RYDVQHEAGV-ASPKLTTGRRGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTK-CAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            +KN  + ++  + + L+     G LQHG  K  A  F     TI R+W   +  +QH + V  S K+        GRK I ++   A++  IPL  RT  R +A A+ V  +T+HR +K   LR H+NA+KP LT + K+ RL + L  V        S   HD  + +H+DEKWFY+ K  +++YL  +EI P+R  +SK+FITKVMF+AAVARPR + + N  F+GK+G++ FT   PA R+S+NR AGTL+TK    VTKE  ++ L E V+PAI+ KWP    +  IF+QQDNAKPH   +  +  EE S DGFDIRL  QPPNSPD N+LDLGFF  IQSLQ++    + D+L+S V+T++E     +L  V+++LQTCM++I+   G N Y+  H+GK K  R G
Sbjct:  190 KKNLTNNQRQIIYKMLMQQIVDGKLQHGTLKHVATLFSVSKWTISRIWHDAKLQLQHGSLVDVSSKMAN----VVGRKRIQID--YAQVSQIPLRRRTNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVTR------SLTFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKWPR-DHTGPIFIQQDNAKPHIDVNDAEFNEEASKDGFDIRLCFQPPNSPDLNVLDLGFFRVIQSLQEQEVLGSNDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQG 587          
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA)

HSP 1 Score: 310 bits (795), Expect = 6.980e-98
Identity = 175/408 (42.89%), Postives = 244/408 (59.80%), Query Frame = 1
Query:   40 KNFNDPEKDEVTRFLLA-GSTKGVLQHGAYKGAAEKFGYCWETIKRLWRRYDVQHEAGVASPKLTTGR-RGKSGRKGIPLEELQARLRDIPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRERLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDEIPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPAVRNSRNRAAGTLVTKCAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIFVQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFASIQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCGGENTYKLQHVGKDKAARAG 1257
            KN ++ ++  V + LL   + K +L HGA+   A  FG    T++ +W+R  V     +      + R +G  GR  +  E + +RL+ +P   RTT R +AAAL +P +TLH   K      +S++++P LT   K  R++W L +V   A      V  D  D+VHVDEKWF+     + +YL   E PP R  +SK+FITKVMF++AVARPR + A    F+GK+G W FT KVPA R SRNR AGTLVT    VT+  YKA L++ VIPAIK KWP+ T S  I +QQDNA+PH      D++  C+SDG+ + +  QPPNSPD NILDLGFF +IQSLQ +  +R IDD++S  E AW     A L   +++LQ C+++++  GG N YK+ H+ K   A  G
Sbjct:   26 KNLSNSDRTAVLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGRN-LKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVH--ALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRMGGNNNYKIPHMKKAALAARG 429          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485KBU5_9STRA5.430e-10744.83Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
W2NW41_PHYPR5.150e-10244.33HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
A0A834HDF7_RHOSS1.070e-10142.69Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI000CD873B35.030e-10144.15uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI001CB9A6637.420e-10044.58uncharacterized protein LOC122597563 n=3 Tax=Erige... [more]
A0A6P6TEQ3_COFAR5.100e-9942.69uncharacterized protein LOC113700698 n=2 Tax=Coffe... [more]
A0A834LPB9_RHOSS8.410e-9942.47Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A1R3KDY3_9ROSI1.680e-9843.32Transposase, Tc1-like protein n=2 Tax=Corchorus ol... [more]
UPI001CB8D7AC3.160e-9843.55uncharacterized protein LOC122583467 n=1 Tax=Erige... [more]
A0A6A4Z2B2_9STRA6.980e-9842.89Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:109151..110407 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog38727.Pavir.Eb00546.1.p
Model size1257
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.3e-95
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,37TMG@33090|Viridiplantae,3GG9M@35493|Streptophyta,3M2XW@4447|Liliopsida,3IN2T@38820|Poales
Cds size1257
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789973.0075083-CDS-P-littoralis_Contig20:109150..1104071680789973.0075083-CDS-P-littoralis_Contig20:109150..110407Pylaiella littoralis U1_48CDSP-littoralis_Contig20 109151..110407 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.24.1prot_P-littoralis_Contig20.24.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 109151..110407 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.24.1

>prot_P-littoralis_Contig20.24.1 ID=prot_P-littoralis_Contig20.24.1|Name=mRNA_P-littoralis_Contig20.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=419bp
MSAAGSASQVAKRKNFNDPEKDEVTRFLLAGSTKGVLQHGAYKGAAEKFG
YCWETIKRLWRRYDVQHEAGVASPKLTTGRRGKSGRKGIPLEELQARLRD
IPLNDRTTQRRLAAALGVPLTTLHRNLKALGLRAHSNALKPYLTPEGKRE
RLRWVLRWVRTAAAAGGSRVLHDFEDFVHVDEKWFYLFKDGQKFYLYDDE
IPPVRKVQSKRFITKVMFIAAVARPRHNPATNAPFNGKVGLWAFTEKVPA
VRNSRNRAAGTLVTKCAEVTKETYKAKLIEGVIPAIKEKWPAATRSNTIF
VQQDNAKPHRVNDHQDLLEECSSDGFDIRLINQPPNSPDTNILDLGFFAS
IQSLQDRTRARTIDDLISEVETAWEAAAPAKLGKVWISLQTCMEQILLCG
GENTYKLQHVGKDKAARAG
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mRNA from alignment at P-littoralis_Contig20:109151..110407+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.24.1 ID=mRNA_P-littoralis_Contig20.24.1|Name=mRNA_P-littoralis_Contig20.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig20:109151..110407+ (Pylaiella littoralis U1_48)
ATGTCGGCTGCTGGGAGTGCCTCCCAGGTGGCAAAACGCAAGAATTTCAA CGATCCCGAAAAAGATGAGGTGACTCGGTTCCTGCTTGCTGGTAGCACAA AAGGGGTTCTGCAGCACGGCGCGTACAAGGGAGCCGCGGAGAAGTTTGGG TACTGCTGGGAGACGATTAAGAGGTTGTGGAGGAGGTACGATGTGCAGCA CGAAGCAGGGGTCGCCAGCCCAAAGCTGACGACCGGTCGCAGGGGGAAAA GCGGCCGGAAGGGCATTCCCTTAGAAGAGCTGCAGGCGCGCCTCCGTGAC ATCCCACTGAACGACCGCACCACACAGCGCCGCCTGGCTGCAGCGCTTGG GGTTCCTCTCACTACGCTGCACCGTAACCTCAAAGCGCTTGGATTGAGGG CACACTCAAACGCGCTCAAGCCGTATCTCACCCCCGAGGGGAAGCGCGAA AGGCTGAGGTGGGTGTTGCGGTGGGTACGGACAGCAGCAGCAGCAGGCGG TTCCAGGGTACTGCACGATTTTGAGGACTTCGTCCACGTGGATGAGAAGT GGTTTTATCTCTTCAAAGATGGGCAGAAGTTCTACCTGTACGACGATGAG ATCCCCCCTGTCCGCAAGGTCCAGAGCAAGAGATTCATTACGAAGGTCAT GTTTATCGCTGCTGTAGCTCGCCCGCGTCACAACCCGGCCACCAACGCCC CTTTCAACGGCAAGGTCGGCTTGTGGGCTTTCACAGAGAAGGTCCCTGCT GTACGCAACAGCCGGAACCGTGCTGCTGGGACTCTCGTCACAAAGTGTGC AGAGGTGACGAAGGAGACGTACAAGGCGAAGCTGATCGAGGGGGTGATCC CCGCAATCAAGGAGAAGTGGCCGGCTGCGACTCGGAGCAACACCATCTTC GTCCAGCAGGACAACGCGAAGCCGCACCGTGTCAACGACCACCAGGACTT GCTGGAGGAGTGTTCCTCGGATGGATTCGACATCAGACTCATCAACCAGC CGCCCAACAGCCCTGACACCAACATCCTGGACCTGGGTTTCTTCGCGTCA ATCCAGTCCCTGCAGGACCGTACACGAGCCAGGACTATCGACGATCTCAT CAGCGAGGTCGAGACCGCCTGGGAGGCGGCGGCACCGGCCAAGCTGGGCA AGGTGTGGATTTCGCTCCAGACCTGCATGGAACAGATCCTGCTCTGCGGG GGGGAGAACACCTACAAGCTGCAGCACGTGGGCAAGGACAAGGCTGCACG GGCGGGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:109151..110407+

>mRNA_P-littoralis_Contig20.24.1 ID=mRNA_P-littoralis_Contig20.24.1|Name=mRNA_P-littoralis_Contig20.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig20:109151..110407+ (Pylaiella littoralis U1_48)
ATGTCGGCTGCTGGGAGTGCCTCCCAGGTGGCAAAACGCAAGAATTTCAA
CGATCCCGAAAAAGATGAGGTGACTCGGTTCCTGCTTGCTGGTAGCACAA
AAGGGGTTCTGCAGCACGGCGCGTACAAGGGAGCCGCGGAGAAGTTTGGG
TACTGCTGGGAGACGATTAAGAGGTTGTGGAGGAGGTACGATGTGCAGCA
CGAAGCAGGGGTCGCCAGCCCAAAGCTGACGACCGGTCGCAGGGGGAAAA
GCGGCCGGAAGGGCATTCCCTTAGAAGAGCTGCAGGCGCGCCTCCGTGAC
ATCCCACTGAACGACCGCACCACACAGCGCCGCCTGGCTGCAGCGCTTGG
GGTTCCTCTCACTACGCTGCACCGTAACCTCAAAGCGCTTGGATTGAGGG
CACACTCAAACGCGCTCAAGCCGTATCTCACCCCCGAGGGGAAGCGCGAA
AGGCTGAGGTGGGTGTTGCGGTGGGTACGGACAGCAGCAGCAGCAGGCGG
TTCCAGGGTACTGCACGATTTTGAGGACTTCGTCCACGTGGATGAGAAGT
GGTTTTATCTCTTCAAAGATGGGCAGAAGTTCTACCTGTACGACGATGAG
ATCCCCCCTGTCCGCAAGGTCCAGAGCAAGAGATTCATTACGAAGGTCAT
GTTTATCGCTGCTGTAGCTCGCCCGCGTCACAACCCGGCCACCAACGCCC
CTTTCAACGGCAAGGTCGGCTTGTGGGCTTTCACAGAGAAGGTCCCTGCT
GTACGCAACAGCCGGAACCGTGCTGCTGGGACTCTCGTCACAAAGTGTGC
AGAGGTGACGAAGGAGACGTACAAGGCGAAGCTGATCGAGGGGGTGATCC
CCGCAATCAAGGAGAAGTGGCCGGCTGCGACTCGGAGCAACACCATCTTC
GTCCAGCAGGACAACGCGAAGCCGCACCGTGTCAACGACCACCAGGACTT
GCTGGAGGAGTGTTCCTCGGATGGATTCGACATCAGACTCATCAACCAGC
CGCCCAACAGCCCTGACACCAACATCCTGGACCTGGGTTTCTTCGCGTCA
ATCCAGTCCCTGCAGGACCGTACACGAGCCAGGACTATCGACGATCTCAT
CAGCGAGGTCGAGACCGCCTGGGAGGCGGCGGCACCGGCCAAGCTGGGCA
AGGTGTGGATTTCGCTCCAGACCTGCATGGAACAGATCCTGCTCTGCGGG
GGGGAGAACACCTACAAGCTGCAGCACGTGGGCAAGGACAAGGCTGCACG
GGCGGGC
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