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Homology
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI) HSP 1 Score: 292 bits (747), Expect = 1.920e-86 Identity = 162/207 (78.26%), Postives = 170/207 (82.13%), Query Frame = 3
Query: 90 MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAXXXXXXXXXXESYSHPQPPASQAAVSA----------SPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHS 680
MTNDDWDGAASMHKALK LATS+RPISASRVKTAAA+AL+NVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRM+ET E LR+VPD DKPPVFRVIREWHEKGMFKGLE+FAS GA XXXXXXXXX +PA M LPPPTGVIHLGLK GDTYGSAYPPH+
Sbjct: 1 MTNDDWDGAASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHA 207
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE) HSP 1 Score: 309 bits (791), Expect = 3.140e-84 Identity = 189/297 (63.64%), Postives = 200/297 (67.34%), Query Frame = 3
Query: 90 MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAXXXXXXXXXXESYSHPQPPASQAAVSA-------SPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHSANGGGVPDVGVDAGAPATYAPSFGQHSGSSPPGGAAXXXXXXXXXXXVGGWGGAAGDGLDEPLSDSRFVPQEAPLPEPDHAPVEGGNAGSALQ 959
M NDDWDGAA M+KALK LATS+RPISASRVKTAAA+AL+NVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQA SKWGHKDVFTPRFAQRM+ET E LR+VPD DKPPVFRVIREWHEKGMFKGLE+FAS GA XXXXXXXXX +PA M LPPPTGVIHLGLK GDTYGSAYPPH+ XXX GGWGG LDEPLSDSRFVPQE PLP+ DHA G + G Q
Sbjct: 1 MANDDWDGAAPMNKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAHSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPAGVANGGWGGR----LDEPLSDSRFVPQEPPLPDNDHAVSSGTDVGGVQQ 293
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A835ZBE3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE3_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.210e-22 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = 3
Query: 114 AASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQA--QSKWGHKD---VFTPRFAQRM-AETTETLRHVPDRDKPPVFRVIREWHEKGMF 470
AA+++KAL LATS RPISA+RVK AA +A VKEYKRVVHA+E++++ A+P R+G ++IDS+C+ + G KD VF RF QRM ET LR VP D+P V RV+ WH +G+F
Sbjct: 3 AAALNKALAYLATSKRPISAARVKEAAKEAQAQVKEYKRVVHAVEKFLKHAKPQQRLGVVYLIDSLCKSSGRPPSAGAKDSGLVFAARFGQRMRGETLPKLREVPSSDRPAVERVVANWHTRGLF 127
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A397BZL8_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZL8_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.030e-16 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
W G + AL +LAT+ + +SA+R+K A ++ KEYKRVVHA+E + KA HR+ ++ID++ R +Q+K+G KD F RF M T R VPD K V +V+ EW ++G++ E +GGA
Sbjct: 4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A1V9ZH29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZH29_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.740e-16 Identity = 52/133 (39.10%), Postives = 88/133 (66.17%), Query Frame = 3
Query: 108 DGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
+G A + +AL +AT + SA++VKTA+A L VK+YKRVVHA+E + K++ HR+G ++ID++ RQ+Q+K+G KD+F PRF+Q ++ T +L+ +PD + R++ +W + +F + +GGA
Sbjct: 7 EGEADLKEALAPIAT-PKGTSATKVKTASALCLRMVKDYKRVVHAVETLMWKSE--HRLGFLYLIDAIIRQSQAKFGSEKDLFAPRFSQHLSHTISSLKQLPDDGQEHAHRIVYDWVTRRVFTKEQIIKAGGA 136
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A397C522_9STRA (CID domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C522_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.270e-16 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
W G + AL +LAT+ + +SA+R+K A ++ KEYKRVVHA+E + KA HR+ ++ID++ R +Q+K+G KD F RF M T R VPD K V +V+ EW ++G++ E +GGA
Sbjct: 4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A1V9YU27_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU27_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.960e-15 Identity = 50/133 (37.59%), Postives = 86/133 (64.66%), Query Frame = 3
Query: 108 DGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
+G A + AL +A S + SA+++K A + ++ VK+YKRVVHA+E + K++ HR+G ++ID++ R +QSK+G KD+F+PRF + T +++ VP ++ V+RVI++W + +F E +GGA
Sbjct: 7 EGEAELKAALAPIA-SAKGTSATKIKVACSLCMKLVKDYKRVVHAVETVMWKSEVEHRLGFLYLIDAITRASQSKYGPEKDLFSPRFGIHLRHTISSVKQVPAENQHHVYRVIQDWIARSVFTTEEITKAGGA 138
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A418FAE5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FAE5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.230e-15 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
W G + AL +LAT+ + +SA+R+K A ++ KEYKRVVHA+E + KA HR+ ++ID++ R +Q+K+G KD F RF M T R VPD K V +V+ EW ++G++ E +GGA
Sbjct: 4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A6G0UTM1_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UTM1_9BILA) HSP 1 Score: 91.3 bits (225), Expect = 7.320e-15 Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 3
Query: 123 MHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFK 473
+ + L L S P ++ +A+ +V+ +K VVHA+E++I K +P H++ G ++IDS+ RQ+Q K+ HKDVF PRF+ + +T E P +D+P + RVI W +F+
Sbjct: 9 LEELLTGLTESKAPPGKQQIMDVTKQAMASVRHFKHVVHAVEKFIVKCKPTHKLHGFYMIDSIIRQSQKKFKHKDVFKPRFSANLKQTLENALRCPPKDRPKIVRVINLWRANHIFE 125
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: W4FDW6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDW6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.040e-14 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
W G + AL +LAT+ + +SA+R+K A ++ KEYKRVVHA+E + KA HR+ ++ID++ R +Q+K+G KD F RF M T R VPD K V +V+ EW ++G++ E +GGA
Sbjct: 4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LJK6 |
| Preferred name | SCAF8 |
| PFAMs | CTD_bind,RRM_1 |
| Model size | 3968 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K05747,ko:K13167,ko:K13191,ko:K15560,ko:K16847 |
| KEGG Pathway | ko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008022,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016363,GO:0018130,GO:0019438,GO:0019899,GO:0019904,GO:0031974,GO:0031981,GO:0032774,GO:0034399,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070063,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 |
| Exons | 8 |
| Evalue | 3.45e-93 |
| EggNOG OGs | KOG0132@1|root,KOG0132@2759|Eukaryota |
| Ec32 ortholog description | RNA polymerase II-binding domain |
| Ec32 ortholog | Ec-17_002360.1 |
| Description | RNA binding |
| Cds size | 1611 |
| COG category | L |
| BRITE | ko00000,ko00001,ko03021,ko03041,ko04131,ko04812 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789980.204153-UTR-P-littoralis_Contig20:899423..900777 | 1680789980.204153-UTR-P-littoralis_Contig20:899423..900777 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 899424..900777 - |
| 1680789980.2174778-UTR-P-littoralis_Contig20:901791..901931 | 1680789980.2174778-UTR-P-littoralis_Contig20:901791..901931 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 901792..901931 - |
| 1680789980.2263455-UTR-P-littoralis_Contig20:902348..902432 | 1680789980.2263455-UTR-P-littoralis_Contig20:902348..902432 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 902349..902432 - |
| 1680789980.2355971-UTR-P-littoralis_Contig20:902765..903152 | 1680789980.2355971-UTR-P-littoralis_Contig20:902765..903152 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 902766..903152 - |
| 1680789980.244572-UTR-P-littoralis_Contig20:903793..904096 | 1680789980.244572-UTR-P-littoralis_Contig20:903793..904096 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 903794..904096 - |
| 1680789980.2914004-UTR-P-littoralis_Contig20:909007..909096 | 1680789980.2914004-UTR-P-littoralis_Contig20:909007..909096 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 909008..909096 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789980.2566643-CDS-P-littoralis_Contig20:904096..905392 | 1680789980.2566643-CDS-P-littoralis_Contig20:904096..905392 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 904097..905392 - |
| 1680789980.2656608-CDS-P-littoralis_Contig20:905760..905876 | 1680789980.2656608-CDS-P-littoralis_Contig20:905760..905876 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 905761..905876 - |
| 1680789980.2739909-CDS-P-littoralis_Contig20:906222..906292 | 1680789980.2739909-CDS-P-littoralis_Contig20:906222..906292 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 906223..906292 - |
| 1680789980.2823393-CDS-P-littoralis_Contig20:908878..909007 | 1680789980.2823393-CDS-P-littoralis_Contig20:908878..909007 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 908879..909007 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.208.2 >prot_P-littoralis_Contig20.208.2 ID=prot_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=537bp
MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVH AIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETT ETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAGAAGGAAGAAES YSHPQPPASQAAVSASPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHSANG GGVPDVGVDAGAPATYAPSFGQHSGSSPPGGAAANGAVGGGGAGVGGWGG AAGDGLDEPLSDSRFVPQEAPLPEPDHAPVEGGNAGSALQPQMIPPPPPG PPPPLIAAATGATTNGLPPDMSLEQQLELQLGRQQQEQPPPPPPPPAVEG DESAEEEVEQEDGGSGEDDIQPPPPPPPKTEGKIMELWSLLNMAQASGAA TTATTTTTSATTTATNAEAASADAAAGDASSSAGNDDDGTQPPPPPPPPP PQDMQMCLDHEDSQNDLNNPPPPPRQRGVRPISVSRRRRRHHPEKSRGPG RRRRRRSSSTIRSPLHPVEVVAGVSRSISNNKARTR* back to topmRNA from alignment at P-littoralis_Contig20:899424..909096- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig20.208.2 ID=mRNA_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9673bp|location=Sequence derived from alignment at P-littoralis_Contig20:899424..909096- (Pylaiella littoralis U1_48) GTTCAGAGAGCGGAAGGCAAGAGGCGGAGGGGAGGGTGGGCAGGAGGCCG
CTATCTAAAGGAGATAGCCATCAAGTAGGACTGGGTGCGATGACGAACGA
CGACTGGGATGGCGCCGCCTCGATGCATAAGGCGCTCAAAGCCCTGGCCA
CATCCACTCGCCCCATCTCCGCCTCTAGAGTCAAGACAGCGGCAGCGAAA
GCTTTGGAAAATGTCAAGGTAAAACCACCTTTGTTTTTGTTTTTTTGTTT
TCTTCCATAATATGATATGATCATTTTACAAGAGGGCAGTGTGGCCAAAC
GAACACATTCAAGGATTGATTTCTCCCCGTACACGCCCTCTCCTTAGGAT
CAGTAGGATCGAGGCACAGCAGTTTCGCCGCGGCTGCTGCTGTAGACTCC
CGCCCCCCGTCCAGATACTGAAGTTCGCCGTAAAAGCATCTCTCTAGCTT
TATTTGTTGTGGGGCCTGTGGGTTTTGAGAAAAGGGAACCCTGCCCATAT
TTCGATTGATCCATTCTCTCTGTACGAACCTACGGGTACGCTTCTCTGTA
CGCAGGACTCCCGTCTGCTGTGCGAGAGGCACTGGTAAAGAACACCACTT
TTTTTTGCACTTGCTTATATAGTGCTATCCGTAGTCGGTAAGTTCACGTT
TCGGCCGCAGCTTGGGTTTGTGCACAAGTATCCAAACAGACCATAGCGCA
CCACGCTTTTTGCCTACTCGATGAATGCTGGAGGGGTTGGAGGTAACCAA
CGCAGTGTGGGATAGGGGTATCGCGTGCGCCGGATTCGGTAACGCCAAGA
GGATATTGCTACAGTAGATACTGCTAAAGAATCTCACATGCATCGGAGAG
GTTCCATCCCTGTCTCCTCCACTGCGTGGTTTGTCGGCAGCTCTATGACA
TGATATCATACGTATATCACAACTGAACTCCCGAATCATACCTGTAGGGT
ACGACCTGTGCCATATACTCCGAGTCCTACGCGATATATCTGAGTTCTGT
CTGGTGGTACATATGCTTTTGCTTTGACGCTGTTTTTTGTGGCACAGATG
CGACATTATGTTGTGCTCGCTGCCTGAAGTATACATAGGGTGACTGAGAG
CAGCAGGATATCCCAGGCCAGAGAAGTGCCGTTTGAATCCGATAGGACAC
CTTGGAGGAGGACCTGGTTTGTTGTTGATTCTCACATCAGCTCATCGCCA
AAATCTAGCCCGCGGTCACAAAAAGTGCTGAGCCCTTGGAAGATCCCGAA
AAACAGAAAGAAACTTAAGCAGTACAAGGGAATACCCAAGAAAGACCTGG
TATACTGCCTTGTATGATACTCGCTGGACGTCAACATGTGGGGATGGCCG
CTTGTTGGCGCTCCCCCACTCACGGCTCCTCCCTTAAAAAAAAAAAATTA
CACAGCGTGTCACATGATCGCACATCACATGATGCTCTACATATGTTTAC
GCAATTTGATCGACAGAGAGTAGTACGTAATTCGTTAACCACTAGATGCA
GAGGAACGGGGGTTCGATTCCCGGTGAATGTGTTCCTTTGCTACTTTGAA
AGCGGCTATGCTGTTAGTAAAAGCAGATTCGGCTTCGCCGACGAGGGTAG
GGACCGCGGACCCCTGCTCGCGAGAAAAAATCTCACGCATGTACCGCAGA
AGGAAGGTGGGGGTAACTCCCCCTGTGTTGACCTTCCTCCTGTGTGACCC
CGTCGATGGGCCTAGCCTGTGGTTTGCAGACTAGTGTGCCAGAGAATATG
GGATGACAACACACGTAATTAGTTAATCCTGGACTGAAACCGTGACATTT
TGTTTTGTCAGACTGCGCGCTGTGTGTGTTCGCTACCCGAATACGGAGTA
TTTCTCTGGATCCTTGTCTAAATGAAGGTGAATTCGATCATGTTTCGTGT
TCGAGTGTTGTCAAAACCCATCAATTCTGGACGCCAGTCTAGAAGTTTTG
AGCGTACTTCTTGAAGAACAAACATGTGTTGGCGCATCAACACAGCAGTT
ATTTTTCACCTCCCTCCTGCGGTGCTTGTGTGCGTGTTTGTTTTCATCCC
ATTCGTTCTCTGGGCACCAGTCTACACCTTTCGGCATGAAGTGGGCGCAC
CAACCGGGGTCACGACAGACAGGAAGAAGATCCCACAGCAGTTTTTTTTT
TTCGTGTAGGAAAAAAAATCCTCTCGTATGATATGGTTCCAGTGTTCAAA
AGGAGGCAAGAGCATCAACATGTTTTATTTGCCCTAAACACCTGCATCCT
ACACTCCCATATTTGGGTAGGTATGATAGCCTCTGACCACCGAACGCGTT
CCTTATCGGATGATTCAGCAGTACCTACGGACACCAATAGGTACTGACCG
CGCAGAGATCAGGACGGTTTGACACGAAAAGGTACTGACCGATCAGTACG
GTTTGTAACGTGAGGACAACACACACGCACACGCACGCATGCGTACACAC
GCCCTCTGGCTCGCCCTCGAAACCTGCAACGACCCCTGTCGCGATGGTTC
GCGTGAAGCAGCTCGGCACACGACGGATCCTTGACGTCATTTAACGTCTC
TCACGTCGCACTCGGTTGACAGCGGTAGGAATCTCGCTCTCATTTCGGGC
GTTTCATTGGTAACGCCGGGGGGGGCGGGAGAGAGTCGCGAGCGAAGCAA
CAAGTTGTTCATATTTTTTATGCGGGGTCAATCTACTTGTTTCGTTTCGT
GTTCCTGCTCTGACTTGCTTCCTGCTGTTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTCTACTGCCGCTATTGACGCGCAACAAAACCACGCGTGG
GCAGGAATACAAGCGCGTGGTTCACGCCATCGAGCGCTACATACGGAAAG
CCCAGCCTCATCACCGCATCGGAGGTAAGCGCGCGACAGCGGCGGGGCAA
ACACACACACACACCACATCGTTGGTAGCGTCCACCTGCACCATTGCATC
AATAACCGCGTCCCTTAACACTCATCATACCAGTAACGTAAAGACGTCGT
GCAACAAGTCGGTATTGCTCGGTTGCGGGCTTTTCGCGCCGGTATCGTAG
CACGATACAGCAGTAGCATCCTCGGCATTCCATTGTTTTCTCGTCATCAT
CATCGTGTGCACCACCTCGCGTTCGCTCGGGTGTGGTGTATTCCGAAGTA
CGGTACTTCGAAGTATTTAATACACGCCTCTTTTGGTTTCTACTCGAACC
CTCACCCGTGCAACAAACAGGCTGTTTCGTGATCGACTCGGTGTGCCGGC
AAGCGCAGTCGAAGTGGGGCCACAAGGACGTCTTCACACCCCGCTTCGCG
CAGCGCATGGCCGAGACTACCGAGACATTGAGACACGTGAGATAGATTTA
GATGGATGGCACACACGTCACAATGAACTTGGACAACAATCGGGTTTCGC
CCGGCGTGGATTCATGGTGCAAATTTTCGGCGGGCTCTTCTTTTCTATGC
CGTGTGTGATGCATGCAGCATGTGCTATTCGTCGTTTTGGGGTGTGAGAT
TTCCGGAAACTCGTGTTCCGACGTTTTGTTGGTGTTCTCGTGTCGCCCAT
CCCCGGCCGTTGCAGCCCCGAAATTTAGTTTTTCAGGCTAACCTTGGTCT
GGGCGGAGCGCGCTAAGCGGTATCCCCCTCCCCGTCCTACCCCTGGCCAA
CCAACACCCCCCTTCTGTCTTCGCTCCCAATACCGTCATCGAACCCCTAA
CCAGGTTCCGGACAGAGATAAGCCGCCGGTGTTTCGCGTAATCCGCGAGT
GGCACGAAAAGGGTATGTTCAAGGGTCTCGAATCGTTTGCCTCTGGTGGT
GCCGGAGCTGCGGGTGGTGCCGCCGGTGCTGCTGAGAGTTATTCGCACCC
CCAACCCCCTGCCTCGCAAGCCGCGGTGTCTGCGTCTCCCGCTCAGATGG
GGCTCCCGCCTCCCACCGGAGTGATTCACCTTGGGCTCAAGGTGGGAGAC
ACGTACGGTAGCGCCTACCCGCCGCACTCCGCTAACGGTGGCGGAGTTCC
AGATGTTGGCGTCGACGCAGGGGCTCCGGCGACATACGCCCCGTCCTTTG
GGCAGCACAGTGGTAGCAGCCCGCCCGGAGGTGCTGCTGCAAATGGAGCT
GTCGGCGGTGGAGGTGCCGGCGTCGGCGGGTGGGGTGGGGCAGCAGGGGA
TGGGCTAGACGAACCTTTGTCTGACTCAAGGTTCGTACCCCAGGAAGCGC
CGCTGCCGGAGCCTGACCACGCCCCCGTGGAGGGGGGCAACGCCGGGAGT
GCCCTACAGCCGCAGATGATTCCGCCTCCGCCTCCGGGCCCCCCTCCCCC
GCTGATAGCAGCGGCGACGGGGGCGACGACCAACGGGTTGCCTCCGGACA
TGTCGTTAGAGCAGCAGCTAGAGCTGCAGCTGGGGCGCCAGCAGCAAGAG
CAGCCGCCTCCGCCCCCTCCACCGCCCGCGGTAGAAGGTGACGAGTCTGC
GGAGGAGGAAGTGGAGCAGGAGGACGGGGGAAGCGGGGAAGACGATATTC
AGCCGCCGCCCCCGCCACCGCCGAAAACGGAGGGCAAAATCATGGAGCTT
TGGAGCCTGCTGAACATGGCGCAGGCGTCCGGTGCGGCCACCACCGCCAC
GACCACCACGACTTCGGCGACGACCACGGCGACGAACGCCGAGGCAGCGT
CGGCGGACGCGGCGGCGGGAGACGCGTCCTCGTCGGCCGGCAACGATGAT
GACGGCACCCAGCCGCCGCCCCCGCCCCCACCGCCGCCGCCGCAGGACAT
GCAGATGTGTCTCGACCACGAAGACAGTCAGAACGATCTCAACAACCCCC
CCCCCCCCCCCCGCCAGAGAGGAGTGCGTCCGATCTCGGTCAGCCGCCGC
CGCCGCCGCCACCACCCGGAGAAGAGCCGGGGCCCGGGCCGTCGCCGCCG
CCGCCGCAGCAGCAGTACGATCCGTTCGCCGCTCCACCCCGTGGAGGTGG
TGGCGGGGGTATCCAGGAGCATCAGCAACAACAAGGCCCGCACCAGATGA
TGATGGGTCAACATGGGGCAGTAGGGGGTCCTATGATGATGCACCACCAC
GGCCAAGGCATGCCGCCCGGCTCAATGGGAATGGGCCAGCAGGGTGGGGG
GAGGCCCGGCCTGGGGCCAGGGATGGGCCCAGGCCGTGGCGGCGCGATGG
GGCCTGGCGGCGCTGGAAGGGGTGAAGGGCCGACGCTGGGAGGGATGGGA
CCTCGTGGAATTGGGCCAGGGGGAATTAGGCCTGGGATGGGAGTGAACGG
CGGCGGCGTGATGGGACGGGGAGGGCCTCCGCAGCCCGGGATGTTCTTTC
CAGGTGAATTGAATCTGTACAAAGTTCGGTCTATGGTGACCTGGAAGGGG
GGGAGGTCGGGTGTGGTGGTGAAGTGCGATGGATGTTTTCGCTCCCATGA
GTTTCGTCATCTTCCGGCTGTGCTGGCTGCAGGGCCTCGCTTTTGTTTCA
CGACATCACTGCTGATGATGCGCTCTTTGTATCGCCACTGTGGAATGTCT
CGCCGAGCACAGCAGAGGTGCACCAGAAAGAGACAGTCGTAAAAAAAACA
TAACGTTCCAAGGTGAGGAAATTCCCCGGTACCCGCACCCCGGCCGTGAG
CTTTTCGACCTTCTATGAAGTGCCAGGAACTGCTGTAATAAATACAAAGT
CAATAGCGGGCCTTAACGGAGTGATACCCCCACTGAAAGTGCGACGCTCT
TCTCGAAGTTCCTCGTATATCAGAGGACCCACAAACCAAGCACACACAAC
ACGCACACACACAGCCGTGAGGTGGGTTATCCACAGCAGCAGTACGTGCG
TGGCCATTTTTTTTGTCTGCGGCACCTCATGACTTCACCGGCCCGACCGA
CGCGTTGCGACAACGACAACGACGGCACCCATTTTTTTTTTTTGTCATGA
TAACCCCGCCCCTCTCCGCTTTTTCAACCGAACGCTCTTGTCAGGCGGAC
CCAACGGCCCTCGAGGAGGACCTAGAGGCCCGCCTGGTGGCAATGCGCCC
GGTAAGGCTTCGGGAAATGGGTGGGGGCCGCCCGGACCCCCGGCGCCGAA
CGGGCAGCAGAGGGGCAACGAGGCACCCCCGCCGTGGGGAAGCCCGTCAC
GCAGAGATGGAGGAGGAGGAGCAGGAGGAGGAGGGGAGGGGAGGGGAGCT
GGTGGGGCATCTCCTGGTGGTATGCCTGGGTGGAACAACCCACAGCAGCA
GTCGGCAGGACGCGGTGGCGGGGGGGAGGGCGGCGGACGGGGGGCAGGGG
GTTTCGAAAGCAACAACGGTAGCAACAATAACGGCCCTCCTCCACCACCC
CCTCCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGCCAGCAACGGTCGCCC
TTCTCGGTGGGGTTCCCGACCCACTGCTGGGGTCGGTGGGCGCGGTAACG
GCAACCTGACCGCCGGCGGGCCCGGAGGTATGGCGGGGCCGACCACTCCG
CTAGGCCCACCTGGCCCCAGAGGAATGGCGAGCCCGGGTGGCCCCATGAT
CCCGAGGATTCCTGACGGCGGGCAAGTGAGTCCTGGGCAGCAAGGGGAAC
TGATGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCACTGGCACGCGCAAGGGCGGACTCCTCCTCCGCGTGGTGT
TATGGGGCAACCAGGCGGCGGCGGCGGGGGCGGCGGCCCGCCTCCGGCAC
GGGGTCCGTTGCCACCGCCGCCGCCAGGACAGCAGCAGCAGCAGCAAGGT
TCGCCCCCGCCGCCCCCCCGAGGCCCGCCCGGAAGGATGGGGATGGGGGC
GGGGAGACCGGAGATGATGATGATGATGGGGCCTCGCGGGGGGTCTCCAC
GCGGAGGGTTGCCGAGAGGAGCAGGGATGCCGCCGCCGGGTGCGGGGGTC
GGGGGGCACGGCCCGCAAGGGCACGACCGATGGCAGCAGCATGGGCCGCC
GCAAGGATCGCCATTACCGGCGGCGGAGGGGGGAGGGGGGATGGGGCCGG
GGGGCGGCGGGGGGAAGCAATGGCCTGGGCCTGGGCCTGGGCCCGGGCAT
GGTGGTGTGCTCGGCGGGCAGATAATTGCGGGACCGCCGGGAGGGGTGGG
CGTTGAGAATGGTGGTATGGGCGGCGGCGGCGGACGCCCGCAAATGCCGC
CGTTCCCCCCGTCAGGGTTTGGGGCGCCGCCGCCTCCGCCGCCGCCGGAA
ACCGCCGCCGGTGAAGGCGCGGGCGGAGGGGGGGAGGGAGAGTCACCGCC
GCCGCCTGCTCCCCCGGCACTCGCTGAGGGCGGGAGTGTTCTCCTTACGT
CGAAGGTGGGCGGGATATGTTTTGAGTGTCTTGCGTGTATGTGTCTGTGT
GCCCTGGTTTGTGTGTGGGTGTGCCCCGTATGGGTTGAACAAAAGTGCGA
GGCGGTCAGCAGCATCTGCTCACTATTGTCCGAGAATACCAGATGCAGGC
GACGACAAGGCTACTGCCGTAGTTGCAACAAATGTGTATTCTGTTCTATG
ATACCTGGTGGCCGAGGAGCGCTTTGTGAGCGAACGGCCTTGCATACATG
ATGTGCAGGATTTTTTTTTTTACTTATTTCAAGAAATGTTGAGAAAAATG
AGAGGGAGGGAAGTTGATTGGCGAAGATTAACGAGACTCCCTCCCTGTGT
TGCTGATTGGCTCGTGATTGTTTTTCTCACAGACAGCGCAGCACAGCAGT
TGTGACCGACGCAGTGCTGCGTGGACCGGAACTCCTGTGCTTGTTTTTGT
TTTCTGTTTTGCATTCTCGGTTTAAGAGGGCGATAAGTTCGCTCAACGTG
TTGCCATCACCAGATTCTGATCGTGGGTATTGTCCATCCTGACCCTTGCT
GCCGAGTTGGTTCTTGCTCAAATTCGTTGCCCTGGAAGCCGTAGCCCGCG
CCCGTCGGGGATTCGGACCCAACGACGGTAGTCCCCACAGCAGTACGTCC
ATGCATTCTCGCTACAGCAGGACAAGGTAGTGAGAGCGGTTAAGCGTTTG
GGAGTGCTTCTACTTGGGATGGGGGACCTGGCTAGCTAGCTCCGCCCCAA
CAACAGCAGTGAGGCAAGCAACAGCGGGAATTCGTCTGCGCAGCAGACGA
TAGATTTGATCCACTTCTCGACGAGGTCTCCCGAAAGCAGTGTTTTCTGC
TATAATTTTCATTCCCACCGCGTGCGTGACGCATGATATTTGTTGTGCGT
TTTGACTCGTTTCAGCCGAATGGGGGTTGCAGGTCTTTAACTTGGGTGCC
GCCCCCCCCCCTCGCACCCTCTTACTCACATTATTGCCCCCCCCCCCGAA
TCCTCGATGAACCGTCCAGATTACGGACGCGAACTGGTCGGACGGCTCCC
TCGACCCAGAAGACAACGACGATGATGCGGACTTTGATGACGATTTCACG
GGCGTTGGTGCTGGTGCTGGTGCTTCGGCGTCTTCTCCGAAACGCCAAAA
AGTTGCTTGAAACGCTCGCCGCGACATATATTATCAATAACCGAGTACTG
CACTGCAGTATGAAACTGGGGTCGCTTTTGCTTTGCATTTCACACAACGT
TTCTGTACGGGCGAACGTGGGCGTGGGCTTGAGCGTGAGCGTCTGCGTGT
GCGTGTGTGCTGGTGTACTGGTGTACTGGTGTACGCCCGAAAGTTGCGGG
TTGTGTTGAACGGCGAAGGGGGCGGAAGTACCACTGCACTACTGCTGTCT
GGCTGCTGTCATAAAGCAGACAGGCAGAGGTAATTACTTTGTTTTGCGTT
GCGCTTTTCATGCTTTTTCTTTTTACAGGGCATCGCCGTATAATAATAAT
AGTAATAATACACGTAATGTTTTTTTCTGCTTTACACTGCAAGTAGCAAT
ACTGCACCACATTCGAAACCCGCTAGTAAGATCGTTCATTTGAAACGCAT
GGTAGCGACCACGACGCTTCGGTTTGCCTTGTTGTTGGTTATTAGACGCA
GCTCGCACGGTGATTGCGTCGTGGTTTGGTTTACTTTGCCTGGCGAATGA
CCTTGAATGTTGAATGGCCCCGGGGATTTTACTCTCTCGAGCGAGATTGT
GGTTGTCGATGACCGCAGGGGATTTCATCTAAGCCTACAGTAGTAGAGAG
CGAGCTTTTATGAGTCGACGGCTCCAAGGAAGCCGAATTCAACGAGTTAC
CAGGAGACGGATATCGGATCGTGTGTGTGGATTCCAGGGGGGGAGAAGAA
AGTGCAGCTACTTGAGGTGCTCTGGATGTGAGCTTAGCTACTTCGTTGTC
CTCGAAATGGGTTGGCGGGCTAGACTTTCCGAAGGGGGCGGGCGGCCTCT
GAGACGCTGAGCGTGAGCCTCAGTTTTTTCTTATCTGAGTTTCAGGCATT
ACACCGTTGACACAAAATACACGCATTCAAGTACATTTGTGTATATTTCT
TGTTGCCCGAACGAGAGGTTCGGTTGAGCAGCAGTTGTGCGTCGTTGCTG
AAATGGGGGCAATGTTATCATAGTGTTTACATTTTTTTTTTGCGCACGTC
ATCGCCATTGTCAGCGTCGTAATCGTCGTTGTCGGGCGCTCTTCCGAGAA
AATAGAGATAAAAAGAAGCACTACTGTCCTGTACTTACCATACATTGTAC
GTGCAATGTACAGCTCCGTACCCATTTTTTTTTTAACTCAACTGTGTGGA
GGAGATAATGTGACAAGGCCCAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig20:899424..909096- >mRNA_P-littoralis_Contig20.208.2 ID=mRNA_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1611bp|location=Sequence derived from alignment at P-littoralis_Contig20:899424..909096- (Pylaiella littoralis U1_48) ATGACGAACGACGACTGGGATGGCGCCGCCTCGATGCATAAGGCGCTCAA AGCCCTGGCCACATCCACTCGCCCCATCTCCGCCTCTAGAGTCAAGACAG CGGCAGCGAAAGCTTTGGAAAATGTCAAGGAATACAAGCGCGTGGTTCAC GCCATCGAGCGCTACATACGGAAAGCCCAGCCTCATCACCGCATCGGAGG CTGTTTCGTGATCGACTCGGTGTGCCGGCAAGCGCAGTCGAAGTGGGGCC ACAAGGACGTCTTCACACCCCGCTTCGCGCAGCGCATGGCCGAGACTACC GAGACATTGAGACACGTTCCGGACAGAGATAAGCCGCCGGTGTTTCGCGT AATCCGCGAGTGGCACGAAAAGGGTATGTTCAAGGGTCTCGAATCGTTTG CCTCTGGTGGTGCCGGAGCTGCGGGTGGTGCCGCCGGTGCTGCTGAGAGT TATTCGCACCCCCAACCCCCTGCCTCGCAAGCCGCGGTGTCTGCGTCTCC CGCTCAGATGGGGCTCCCGCCTCCCACCGGAGTGATTCACCTTGGGCTCA AGGTGGGAGACACGTACGGTAGCGCCTACCCGCCGCACTCCGCTAACGGT GGCGGAGTTCCAGATGTTGGCGTCGACGCAGGGGCTCCGGCGACATACGC CCCGTCCTTTGGGCAGCACAGTGGTAGCAGCCCGCCCGGAGGTGCTGCTG CAAATGGAGCTGTCGGCGGTGGAGGTGCCGGCGTCGGCGGGTGGGGTGGG GCAGCAGGGGATGGGCTAGACGAACCTTTGTCTGACTCAAGGTTCGTACC CCAGGAAGCGCCGCTGCCGGAGCCTGACCACGCCCCCGTGGAGGGGGGCA ACGCCGGGAGTGCCCTACAGCCGCAGATGATTCCGCCTCCGCCTCCGGGC CCCCCTCCCCCGCTGATAGCAGCGGCGACGGGGGCGACGACCAACGGGTT GCCTCCGGACATGTCGTTAGAGCAGCAGCTAGAGCTGCAGCTGGGGCGCC AGCAGCAAGAGCAGCCGCCTCCGCCCCCTCCACCGCCCGCGGTAGAAGGT GACGAGTCTGCGGAGGAGGAAGTGGAGCAGGAGGACGGGGGAAGCGGGGA AGACGATATTCAGCCGCCGCCCCCGCCACCGCCGAAAACGGAGGGCAAAA TCATGGAGCTTTGGAGCCTGCTGAACATGGCGCAGGCGTCCGGTGCGGCC ACCACCGCCACGACCACCACGACTTCGGCGACGACCACGGCGACGAACGC CGAGGCAGCGTCGGCGGACGCGGCGGCGGGAGACGCGTCCTCGTCGGCCG GCAACGATGATGACGGCACCCAGCCGCCGCCCCCGCCCCCACCGCCGCCG CCGCAGGACATGCAGATGTGTCTCGACCACGAAGACAGTCAGAACGATCT CAACAACCCCCCCCCCCCCCCCCGCCAGAGAGGAGTGCGTCCGATCTCGG TCAGCCGCCGCCGCCGCCGCCACCACCCGGAGAAGAGCCGGGGCCCGGGC CGTCGCCGCCGCCGCCGCAGCAGCAGTACGATCCGTTCGCCGCTCCACCC CGTGGAGGTGGTGGCGGGGGTATCCAGGAGCATCAGCAACAACAAGGCCC GCACCAGATGA back to top
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