mRNA_P-littoralis_Contig20.208.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.208.2
Unique NamemRNA_P-littoralis_Contig20.208.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 1.920e-86
Identity = 162/207 (78.26%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   90 MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAXXXXXXXXXXESYSHPQPPASQAAVSA----------SPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHS 680
            MTNDDWDGAASMHKALK LATS+RPISASRVKTAAA+AL+NVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRM+ET E LR+VPD DKPPVFRVIREWHEKGMFKGLE+FAS GA XXXXXXXXX                           +PA M LPPPTGVIHLGLK GDTYGSAYPPH+
Sbjct:    1 MTNDDWDGAASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHA 207          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 3.140e-84
Identity = 189/297 (63.64%), Postives = 200/297 (67.34%), Query Frame = 3
Query:   90 MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAXXXXXXXXXXESYSHPQPPASQAAVSA-------SPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHSANGGGVPDVGVDAGAPATYAPSFGQHSGSSPPGGAAXXXXXXXXXXXVGGWGGAAGDGLDEPLSDSRFVPQEAPLPEPDHAPVEGGNAGSALQ 959
            M NDDWDGAA M+KALK LATS+RPISASRVKTAAA+AL+NVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQA SKWGHKDVFTPRFAQRM+ET E LR+VPD DKPPVFRVIREWHEKGMFKGLE+FAS GA XXXXXXXXX                        +PA M LPPPTGVIHLGLK GDTYGSAYPPH+                                    XXX         GGWGG     LDEPLSDSRFVPQE PLP+ DHA   G + G   Q
Sbjct:    1 MANDDWDGAAPMNKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAHSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPAGVANGGWGGR----LDEPLSDSRFVPQEPPLPDNDHAVSSGTDVGGVQQ 293          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A835ZBE3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.210e-22
Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = 3
Query:  114 AASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQA--QSKWGHKD---VFTPRFAQRM-AETTETLRHVPDRDKPPVFRVIREWHEKGMF 470
            AA+++KAL  LATS RPISA+RVK AA +A   VKEYKRVVHA+E++++ A+P  R+G  ++IDS+C+ +      G KD   VF  RF QRM  ET   LR VP  D+P V RV+  WH +G+F
Sbjct:    3 AAALNKALAYLATSKRPISAARVKEAAKEAQAQVKEYKRVVHAVEKFLKHAKPQQRLGVVYLIDSLCKSSGRPPSAGAKDSGLVFAARFGQRMRGETLPKLREVPSSDRPAVERVVANWHTRGLF 127          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A397BZL8_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZL8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.030e-16
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T    R VPD  K  V +V+ EW ++G++   E   +GGA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A1V9ZH29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZH29_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.740e-16
Identity = 52/133 (39.10%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  108 DGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            +G A + +AL  +AT  +  SA++VKTA+A  L  VK+YKRVVHA+E  + K++  HR+G  ++ID++ RQ+Q+K+G  KD+F PRF+Q ++ T  +L+ +PD  +    R++ +W  + +F   +   +GGA
Sbjct:    7 EGEADLKEALAPIAT-PKGTSATKVKTASALCLRMVKDYKRVVHAVETLMWKSE--HRLGFLYLIDAIIRQSQAKFGSEKDLFAPRFSQHLSHTISSLKQLPDDGQEHAHRIVYDWVTRRVFTKEQIIKAGGA 136          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A397C522_9STRA (CID domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C522_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 8.270e-16
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T    R VPD  K  V +V+ EW ++G++   E   +GGA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A1V9YU27_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU27_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.960e-15
Identity = 50/133 (37.59%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  108 DGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            +G A +  AL  +A S +  SA+++K A +  ++ VK+YKRVVHA+E  + K++  HR+G  ++ID++ R +QSK+G  KD+F+PRF   +  T  +++ VP  ++  V+RVI++W  + +F   E   +GGA
Sbjct:    7 EGEAELKAALAPIA-SAKGTSATKIKVACSLCMKLVKDYKRVVHAVETVMWKSEVEHRLGFLYLIDAITRASQSKYGPEKDLFSPRFGIHLRHTISSVKQVPAENQHHVYRVIQDWIARSVFTTEEITKAGGA 138          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A418FAE5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FAE5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.230e-15
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T    R VPD  K  V +V+ EW ++G++   E   +GGA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: A0A6G0UTM1_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UTM1_9BILA)

HSP 1 Score: 91.3 bits (225), Expect = 7.320e-15
Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  123 MHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFK 473
            + + L  L  S  P    ++     +A+ +V+ +K VVHA+E++I K +P H++ G ++IDS+ RQ+Q K+ HKDVF PRF+  + +T E     P +D+P + RVI  W    +F+
Sbjct:    9 LEELLTGLTESKAPPGKQQIMDVTKQAMASVRHFKHVVHAVEKFIVKCKPTHKLHGFYMIDSIIRQSQKKFKHKDVFKPRFSANLKQTLENALRCPPKDRPKIVRVINLWRANHIFE 125          
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Match: W4FDW6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDW6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.040e-14
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  105 WDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMAETTETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGA 503
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T    R VPD  K  V +V+ EW ++G++   E   +GGA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.208.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LJK6_ECTSI1.920e-8678.26CID domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A6H5JF85_9PHAE3.140e-8463.64CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZBE3_9STRA3.210e-2251.20CID domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A397BZL8_9STRA2.030e-1639.55CID domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZH29_9STRA4.740e-1639.10Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A397C522_9STRA8.270e-1639.55CID domain-containing protein n=4 Tax=Aphanomyces ... [more]
A0A1V9YU27_9STRA1.960e-1537.59Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A418FAE5_9STRA5.230e-1539.55Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6G0UTM1_9BILA7.320e-1535.90Uncharacterized protein n=1 Tax=Halicephalobus sp.... [more]
W4FDW6_9STRA1.040e-1439.55Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:899424..909096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJK6
Preferred nameSCAF8
PFAMsCTD_bind,RRM_1
Model size3968
Max annot lvl2759|Eukaryota
KEGG koko:K05747,ko:K13167,ko:K13191,ko:K15560,ko:K16847
KEGG Pathwayko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008022,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016363,GO:0018130,GO:0019438,GO:0019899,GO:0019904,GO:0031974,GO:0031981,GO:0032774,GO:0034399,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070063,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576
Exons8
Evalue3.45e-93
EggNOG OGsKOG0132@1|root,KOG0132@2759|Eukaryota
Ec32 ortholog descriptionRNA polymerase II-binding domain
Ec32 orthologEc-17_002360.1
DescriptionRNA binding
Cds size1611
COG categoryL
BRITEko00000,ko00001,ko03021,ko03041,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.208.2prot_P-littoralis_Contig20.208.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 904097..909007 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789980.204153-UTR-P-littoralis_Contig20:899423..9007771680789980.204153-UTR-P-littoralis_Contig20:899423..900777Pylaiella littoralis U1_48UTRP-littoralis_Contig20 899424..900777 -
1680789980.2174778-UTR-P-littoralis_Contig20:901791..9019311680789980.2174778-UTR-P-littoralis_Contig20:901791..901931Pylaiella littoralis U1_48UTRP-littoralis_Contig20 901792..901931 -
1680789980.2263455-UTR-P-littoralis_Contig20:902348..9024321680789980.2263455-UTR-P-littoralis_Contig20:902348..902432Pylaiella littoralis U1_48UTRP-littoralis_Contig20 902349..902432 -
1680789980.2355971-UTR-P-littoralis_Contig20:902765..9031521680789980.2355971-UTR-P-littoralis_Contig20:902765..903152Pylaiella littoralis U1_48UTRP-littoralis_Contig20 902766..903152 -
1680789980.244572-UTR-P-littoralis_Contig20:903793..9040961680789980.244572-UTR-P-littoralis_Contig20:903793..904096Pylaiella littoralis U1_48UTRP-littoralis_Contig20 903794..904096 -
1680789980.2914004-UTR-P-littoralis_Contig20:909007..9090961680789980.2914004-UTR-P-littoralis_Contig20:909007..909096Pylaiella littoralis U1_48UTRP-littoralis_Contig20 909008..909096 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789980.2566643-CDS-P-littoralis_Contig20:904096..9053921680789980.2566643-CDS-P-littoralis_Contig20:904096..905392Pylaiella littoralis U1_48CDSP-littoralis_Contig20 904097..905392 -
1680789980.2656608-CDS-P-littoralis_Contig20:905760..9058761680789980.2656608-CDS-P-littoralis_Contig20:905760..905876Pylaiella littoralis U1_48CDSP-littoralis_Contig20 905761..905876 -
1680789980.2739909-CDS-P-littoralis_Contig20:906222..9062921680789980.2739909-CDS-P-littoralis_Contig20:906222..906292Pylaiella littoralis U1_48CDSP-littoralis_Contig20 906223..906292 -
1680789980.2823393-CDS-P-littoralis_Contig20:908878..9090071680789980.2823393-CDS-P-littoralis_Contig20:908878..909007Pylaiella littoralis U1_48CDSP-littoralis_Contig20 908879..909007 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.208.2

>prot_P-littoralis_Contig20.208.2 ID=prot_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=537bp
MTNDDWDGAASMHKALKALATSTRPISASRVKTAAAKALENVKEYKRVVH
AIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMAETT
ETLRHVPDRDKPPVFRVIREWHEKGMFKGLESFASGGAGAAGGAAGAAES
YSHPQPPASQAAVSASPAQMGLPPPTGVIHLGLKVGDTYGSAYPPHSANG
GGVPDVGVDAGAPATYAPSFGQHSGSSPPGGAAANGAVGGGGAGVGGWGG
AAGDGLDEPLSDSRFVPQEAPLPEPDHAPVEGGNAGSALQPQMIPPPPPG
PPPPLIAAATGATTNGLPPDMSLEQQLELQLGRQQQEQPPPPPPPPAVEG
DESAEEEVEQEDGGSGEDDIQPPPPPPPKTEGKIMELWSLLNMAQASGAA
TTATTTTTSATTTATNAEAASADAAAGDASSSAGNDDDGTQPPPPPPPPP
PQDMQMCLDHEDSQNDLNNPPPPPRQRGVRPISVSRRRRRHHPEKSRGPG
RRRRRRSSSTIRSPLHPVEVVAGVSRSISNNKARTR*
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mRNA from alignment at P-littoralis_Contig20:899424..909096-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.208.2 ID=mRNA_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9673bp|location=Sequence derived from alignment at P-littoralis_Contig20:899424..909096- (Pylaiella littoralis U1_48)
GTTCAGAGAGCGGAAGGCAAGAGGCGGAGGGGAGGGTGGGCAGGAGGCCG CTATCTAAAGGAGATAGCCATCAAGTAGGACTGGGTGCGATGACGAACGA CGACTGGGATGGCGCCGCCTCGATGCATAAGGCGCTCAAAGCCCTGGCCA CATCCACTCGCCCCATCTCCGCCTCTAGAGTCAAGACAGCGGCAGCGAAA GCTTTGGAAAATGTCAAGGTAAAACCACCTTTGTTTTTGTTTTTTTGTTT TCTTCCATAATATGATATGATCATTTTACAAGAGGGCAGTGTGGCCAAAC GAACACATTCAAGGATTGATTTCTCCCCGTACACGCCCTCTCCTTAGGAT CAGTAGGATCGAGGCACAGCAGTTTCGCCGCGGCTGCTGCTGTAGACTCC CGCCCCCCGTCCAGATACTGAAGTTCGCCGTAAAAGCATCTCTCTAGCTT TATTTGTTGTGGGGCCTGTGGGTTTTGAGAAAAGGGAACCCTGCCCATAT TTCGATTGATCCATTCTCTCTGTACGAACCTACGGGTACGCTTCTCTGTA CGCAGGACTCCCGTCTGCTGTGCGAGAGGCACTGGTAAAGAACACCACTT TTTTTTGCACTTGCTTATATAGTGCTATCCGTAGTCGGTAAGTTCACGTT TCGGCCGCAGCTTGGGTTTGTGCACAAGTATCCAAACAGACCATAGCGCA CCACGCTTTTTGCCTACTCGATGAATGCTGGAGGGGTTGGAGGTAACCAA CGCAGTGTGGGATAGGGGTATCGCGTGCGCCGGATTCGGTAACGCCAAGA GGATATTGCTACAGTAGATACTGCTAAAGAATCTCACATGCATCGGAGAG GTTCCATCCCTGTCTCCTCCACTGCGTGGTTTGTCGGCAGCTCTATGACA TGATATCATACGTATATCACAACTGAACTCCCGAATCATACCTGTAGGGT ACGACCTGTGCCATATACTCCGAGTCCTACGCGATATATCTGAGTTCTGT CTGGTGGTACATATGCTTTTGCTTTGACGCTGTTTTTTGTGGCACAGATG CGACATTATGTTGTGCTCGCTGCCTGAAGTATACATAGGGTGACTGAGAG CAGCAGGATATCCCAGGCCAGAGAAGTGCCGTTTGAATCCGATAGGACAC CTTGGAGGAGGACCTGGTTTGTTGTTGATTCTCACATCAGCTCATCGCCA AAATCTAGCCCGCGGTCACAAAAAGTGCTGAGCCCTTGGAAGATCCCGAA AAACAGAAAGAAACTTAAGCAGTACAAGGGAATACCCAAGAAAGACCTGG TATACTGCCTTGTATGATACTCGCTGGACGTCAACATGTGGGGATGGCCG CTTGTTGGCGCTCCCCCACTCACGGCTCCTCCCTTAAAAAAAAAAAATTA CACAGCGTGTCACATGATCGCACATCACATGATGCTCTACATATGTTTAC GCAATTTGATCGACAGAGAGTAGTACGTAATTCGTTAACCACTAGATGCA GAGGAACGGGGGTTCGATTCCCGGTGAATGTGTTCCTTTGCTACTTTGAA AGCGGCTATGCTGTTAGTAAAAGCAGATTCGGCTTCGCCGACGAGGGTAG GGACCGCGGACCCCTGCTCGCGAGAAAAAATCTCACGCATGTACCGCAGA AGGAAGGTGGGGGTAACTCCCCCTGTGTTGACCTTCCTCCTGTGTGACCC CGTCGATGGGCCTAGCCTGTGGTTTGCAGACTAGTGTGCCAGAGAATATG GGATGACAACACACGTAATTAGTTAATCCTGGACTGAAACCGTGACATTT TGTTTTGTCAGACTGCGCGCTGTGTGTGTTCGCTACCCGAATACGGAGTA TTTCTCTGGATCCTTGTCTAAATGAAGGTGAATTCGATCATGTTTCGTGT TCGAGTGTTGTCAAAACCCATCAATTCTGGACGCCAGTCTAGAAGTTTTG AGCGTACTTCTTGAAGAACAAACATGTGTTGGCGCATCAACACAGCAGTT ATTTTTCACCTCCCTCCTGCGGTGCTTGTGTGCGTGTTTGTTTTCATCCC ATTCGTTCTCTGGGCACCAGTCTACACCTTTCGGCATGAAGTGGGCGCAC CAACCGGGGTCACGACAGACAGGAAGAAGATCCCACAGCAGTTTTTTTTT TTCGTGTAGGAAAAAAAATCCTCTCGTATGATATGGTTCCAGTGTTCAAA AGGAGGCAAGAGCATCAACATGTTTTATTTGCCCTAAACACCTGCATCCT ACACTCCCATATTTGGGTAGGTATGATAGCCTCTGACCACCGAACGCGTT CCTTATCGGATGATTCAGCAGTACCTACGGACACCAATAGGTACTGACCG CGCAGAGATCAGGACGGTTTGACACGAAAAGGTACTGACCGATCAGTACG GTTTGTAACGTGAGGACAACACACACGCACACGCACGCATGCGTACACAC GCCCTCTGGCTCGCCCTCGAAACCTGCAACGACCCCTGTCGCGATGGTTC GCGTGAAGCAGCTCGGCACACGACGGATCCTTGACGTCATTTAACGTCTC TCACGTCGCACTCGGTTGACAGCGGTAGGAATCTCGCTCTCATTTCGGGC GTTTCATTGGTAACGCCGGGGGGGGCGGGAGAGAGTCGCGAGCGAAGCAA CAAGTTGTTCATATTTTTTATGCGGGGTCAATCTACTTGTTTCGTTTCGT GTTCCTGCTCTGACTTGCTTCCTGCTGTTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTCTACTGCCGCTATTGACGCGCAACAAAACCACGCGTGG GCAGGAATACAAGCGCGTGGTTCACGCCATCGAGCGCTACATACGGAAAG CCCAGCCTCATCACCGCATCGGAGGTAAGCGCGCGACAGCGGCGGGGCAA ACACACACACACACCACATCGTTGGTAGCGTCCACCTGCACCATTGCATC AATAACCGCGTCCCTTAACACTCATCATACCAGTAACGTAAAGACGTCGT GCAACAAGTCGGTATTGCTCGGTTGCGGGCTTTTCGCGCCGGTATCGTAG CACGATACAGCAGTAGCATCCTCGGCATTCCATTGTTTTCTCGTCATCAT CATCGTGTGCACCACCTCGCGTTCGCTCGGGTGTGGTGTATTCCGAAGTA CGGTACTTCGAAGTATTTAATACACGCCTCTTTTGGTTTCTACTCGAACC CTCACCCGTGCAACAAACAGGCTGTTTCGTGATCGACTCGGTGTGCCGGC AAGCGCAGTCGAAGTGGGGCCACAAGGACGTCTTCACACCCCGCTTCGCG CAGCGCATGGCCGAGACTACCGAGACATTGAGACACGTGAGATAGATTTA GATGGATGGCACACACGTCACAATGAACTTGGACAACAATCGGGTTTCGC CCGGCGTGGATTCATGGTGCAAATTTTCGGCGGGCTCTTCTTTTCTATGC CGTGTGTGATGCATGCAGCATGTGCTATTCGTCGTTTTGGGGTGTGAGAT TTCCGGAAACTCGTGTTCCGACGTTTTGTTGGTGTTCTCGTGTCGCCCAT CCCCGGCCGTTGCAGCCCCGAAATTTAGTTTTTCAGGCTAACCTTGGTCT GGGCGGAGCGCGCTAAGCGGTATCCCCCTCCCCGTCCTACCCCTGGCCAA CCAACACCCCCCTTCTGTCTTCGCTCCCAATACCGTCATCGAACCCCTAA CCAGGTTCCGGACAGAGATAAGCCGCCGGTGTTTCGCGTAATCCGCGAGT GGCACGAAAAGGGTATGTTCAAGGGTCTCGAATCGTTTGCCTCTGGTGGT GCCGGAGCTGCGGGTGGTGCCGCCGGTGCTGCTGAGAGTTATTCGCACCC CCAACCCCCTGCCTCGCAAGCCGCGGTGTCTGCGTCTCCCGCTCAGATGG GGCTCCCGCCTCCCACCGGAGTGATTCACCTTGGGCTCAAGGTGGGAGAC ACGTACGGTAGCGCCTACCCGCCGCACTCCGCTAACGGTGGCGGAGTTCC AGATGTTGGCGTCGACGCAGGGGCTCCGGCGACATACGCCCCGTCCTTTG GGCAGCACAGTGGTAGCAGCCCGCCCGGAGGTGCTGCTGCAAATGGAGCT GTCGGCGGTGGAGGTGCCGGCGTCGGCGGGTGGGGTGGGGCAGCAGGGGA TGGGCTAGACGAACCTTTGTCTGACTCAAGGTTCGTACCCCAGGAAGCGC CGCTGCCGGAGCCTGACCACGCCCCCGTGGAGGGGGGCAACGCCGGGAGT GCCCTACAGCCGCAGATGATTCCGCCTCCGCCTCCGGGCCCCCCTCCCCC GCTGATAGCAGCGGCGACGGGGGCGACGACCAACGGGTTGCCTCCGGACA TGTCGTTAGAGCAGCAGCTAGAGCTGCAGCTGGGGCGCCAGCAGCAAGAG CAGCCGCCTCCGCCCCCTCCACCGCCCGCGGTAGAAGGTGACGAGTCTGC GGAGGAGGAAGTGGAGCAGGAGGACGGGGGAAGCGGGGAAGACGATATTC AGCCGCCGCCCCCGCCACCGCCGAAAACGGAGGGCAAAATCATGGAGCTT TGGAGCCTGCTGAACATGGCGCAGGCGTCCGGTGCGGCCACCACCGCCAC GACCACCACGACTTCGGCGACGACCACGGCGACGAACGCCGAGGCAGCGT CGGCGGACGCGGCGGCGGGAGACGCGTCCTCGTCGGCCGGCAACGATGAT GACGGCACCCAGCCGCCGCCCCCGCCCCCACCGCCGCCGCCGCAGGACAT GCAGATGTGTCTCGACCACGAAGACAGTCAGAACGATCTCAACAACCCCC CCCCCCCCCCCCGCCAGAGAGGAGTGCGTCCGATCTCGGTCAGCCGCCGC CGCCGCCGCCACCACCCGGAGAAGAGCCGGGGCCCGGGCCGTCGCCGCCG CCGCCGCAGCAGCAGTACGATCCGTTCGCCGCTCCACCCCGTGGAGGTGG TGGCGGGGGTATCCAGGAGCATCAGCAACAACAAGGCCCGCACCAGATGA TGATGGGTCAACATGGGGCAGTAGGGGGTCCTATGATGATGCACCACCAC GGCCAAGGCATGCCGCCCGGCTCAATGGGAATGGGCCAGCAGGGTGGGGG GAGGCCCGGCCTGGGGCCAGGGATGGGCCCAGGCCGTGGCGGCGCGATGG GGCCTGGCGGCGCTGGAAGGGGTGAAGGGCCGACGCTGGGAGGGATGGGA CCTCGTGGAATTGGGCCAGGGGGAATTAGGCCTGGGATGGGAGTGAACGG CGGCGGCGTGATGGGACGGGGAGGGCCTCCGCAGCCCGGGATGTTCTTTC CAGGTGAATTGAATCTGTACAAAGTTCGGTCTATGGTGACCTGGAAGGGG GGGAGGTCGGGTGTGGTGGTGAAGTGCGATGGATGTTTTCGCTCCCATGA GTTTCGTCATCTTCCGGCTGTGCTGGCTGCAGGGCCTCGCTTTTGTTTCA CGACATCACTGCTGATGATGCGCTCTTTGTATCGCCACTGTGGAATGTCT CGCCGAGCACAGCAGAGGTGCACCAGAAAGAGACAGTCGTAAAAAAAACA TAACGTTCCAAGGTGAGGAAATTCCCCGGTACCCGCACCCCGGCCGTGAG CTTTTCGACCTTCTATGAAGTGCCAGGAACTGCTGTAATAAATACAAAGT CAATAGCGGGCCTTAACGGAGTGATACCCCCACTGAAAGTGCGACGCTCT TCTCGAAGTTCCTCGTATATCAGAGGACCCACAAACCAAGCACACACAAC ACGCACACACACAGCCGTGAGGTGGGTTATCCACAGCAGCAGTACGTGCG TGGCCATTTTTTTTGTCTGCGGCACCTCATGACTTCACCGGCCCGACCGA CGCGTTGCGACAACGACAACGACGGCACCCATTTTTTTTTTTTGTCATGA TAACCCCGCCCCTCTCCGCTTTTTCAACCGAACGCTCTTGTCAGGCGGAC CCAACGGCCCTCGAGGAGGACCTAGAGGCCCGCCTGGTGGCAATGCGCCC GGTAAGGCTTCGGGAAATGGGTGGGGGCCGCCCGGACCCCCGGCGCCGAA CGGGCAGCAGAGGGGCAACGAGGCACCCCCGCCGTGGGGAAGCCCGTCAC GCAGAGATGGAGGAGGAGGAGCAGGAGGAGGAGGGGAGGGGAGGGGAGCT GGTGGGGCATCTCCTGGTGGTATGCCTGGGTGGAACAACCCACAGCAGCA GTCGGCAGGACGCGGTGGCGGGGGGGAGGGCGGCGGACGGGGGGCAGGGG GTTTCGAAAGCAACAACGGTAGCAACAATAACGGCCCTCCTCCACCACCC CCTCCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGCCAGCAACGGTCGCCC TTCTCGGTGGGGTTCCCGACCCACTGCTGGGGTCGGTGGGCGCGGTAACG GCAACCTGACCGCCGGCGGGCCCGGAGGTATGGCGGGGCCGACCACTCCG CTAGGCCCACCTGGCCCCAGAGGAATGGCGAGCCCGGGTGGCCCCATGAT CCCGAGGATTCCTGACGGCGGGCAAGTGAGTCCTGGGCAGCAAGGGGAAC TGATGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCACTGGCACGCGCAAGGGCGGACTCCTCCTCCGCGTGGTGT TATGGGGCAACCAGGCGGCGGCGGCGGGGGCGGCGGCCCGCCTCCGGCAC GGGGTCCGTTGCCACCGCCGCCGCCAGGACAGCAGCAGCAGCAGCAAGGT TCGCCCCCGCCGCCCCCCCGAGGCCCGCCCGGAAGGATGGGGATGGGGGC GGGGAGACCGGAGATGATGATGATGATGGGGCCTCGCGGGGGGTCTCCAC GCGGAGGGTTGCCGAGAGGAGCAGGGATGCCGCCGCCGGGTGCGGGGGTC GGGGGGCACGGCCCGCAAGGGCACGACCGATGGCAGCAGCATGGGCCGCC GCAAGGATCGCCATTACCGGCGGCGGAGGGGGGAGGGGGGATGGGGCCGG GGGGCGGCGGGGGGAAGCAATGGCCTGGGCCTGGGCCTGGGCCCGGGCAT GGTGGTGTGCTCGGCGGGCAGATAATTGCGGGACCGCCGGGAGGGGTGGG CGTTGAGAATGGTGGTATGGGCGGCGGCGGCGGACGCCCGCAAATGCCGC CGTTCCCCCCGTCAGGGTTTGGGGCGCCGCCGCCTCCGCCGCCGCCGGAA ACCGCCGCCGGTGAAGGCGCGGGCGGAGGGGGGGAGGGAGAGTCACCGCC GCCGCCTGCTCCCCCGGCACTCGCTGAGGGCGGGAGTGTTCTCCTTACGT CGAAGGTGGGCGGGATATGTTTTGAGTGTCTTGCGTGTATGTGTCTGTGT GCCCTGGTTTGTGTGTGGGTGTGCCCCGTATGGGTTGAACAAAAGTGCGA GGCGGTCAGCAGCATCTGCTCACTATTGTCCGAGAATACCAGATGCAGGC GACGACAAGGCTACTGCCGTAGTTGCAACAAATGTGTATTCTGTTCTATG ATACCTGGTGGCCGAGGAGCGCTTTGTGAGCGAACGGCCTTGCATACATG ATGTGCAGGATTTTTTTTTTTACTTATTTCAAGAAATGTTGAGAAAAATG AGAGGGAGGGAAGTTGATTGGCGAAGATTAACGAGACTCCCTCCCTGTGT TGCTGATTGGCTCGTGATTGTTTTTCTCACAGACAGCGCAGCACAGCAGT TGTGACCGACGCAGTGCTGCGTGGACCGGAACTCCTGTGCTTGTTTTTGT TTTCTGTTTTGCATTCTCGGTTTAAGAGGGCGATAAGTTCGCTCAACGTG TTGCCATCACCAGATTCTGATCGTGGGTATTGTCCATCCTGACCCTTGCT GCCGAGTTGGTTCTTGCTCAAATTCGTTGCCCTGGAAGCCGTAGCCCGCG CCCGTCGGGGATTCGGACCCAACGACGGTAGTCCCCACAGCAGTACGTCC ATGCATTCTCGCTACAGCAGGACAAGGTAGTGAGAGCGGTTAAGCGTTTG GGAGTGCTTCTACTTGGGATGGGGGACCTGGCTAGCTAGCTCCGCCCCAA CAACAGCAGTGAGGCAAGCAACAGCGGGAATTCGTCTGCGCAGCAGACGA TAGATTTGATCCACTTCTCGACGAGGTCTCCCGAAAGCAGTGTTTTCTGC TATAATTTTCATTCCCACCGCGTGCGTGACGCATGATATTTGTTGTGCGT TTTGACTCGTTTCAGCCGAATGGGGGTTGCAGGTCTTTAACTTGGGTGCC GCCCCCCCCCCTCGCACCCTCTTACTCACATTATTGCCCCCCCCCCCGAA TCCTCGATGAACCGTCCAGATTACGGACGCGAACTGGTCGGACGGCTCCC TCGACCCAGAAGACAACGACGATGATGCGGACTTTGATGACGATTTCACG GGCGTTGGTGCTGGTGCTGGTGCTTCGGCGTCTTCTCCGAAACGCCAAAA AGTTGCTTGAAACGCTCGCCGCGACATATATTATCAATAACCGAGTACTG CACTGCAGTATGAAACTGGGGTCGCTTTTGCTTTGCATTTCACACAACGT TTCTGTACGGGCGAACGTGGGCGTGGGCTTGAGCGTGAGCGTCTGCGTGT GCGTGTGTGCTGGTGTACTGGTGTACTGGTGTACGCCCGAAAGTTGCGGG TTGTGTTGAACGGCGAAGGGGGCGGAAGTACCACTGCACTACTGCTGTCT GGCTGCTGTCATAAAGCAGACAGGCAGAGGTAATTACTTTGTTTTGCGTT GCGCTTTTCATGCTTTTTCTTTTTACAGGGCATCGCCGTATAATAATAAT AGTAATAATACACGTAATGTTTTTTTCTGCTTTACACTGCAAGTAGCAAT ACTGCACCACATTCGAAACCCGCTAGTAAGATCGTTCATTTGAAACGCAT GGTAGCGACCACGACGCTTCGGTTTGCCTTGTTGTTGGTTATTAGACGCA GCTCGCACGGTGATTGCGTCGTGGTTTGGTTTACTTTGCCTGGCGAATGA CCTTGAATGTTGAATGGCCCCGGGGATTTTACTCTCTCGAGCGAGATTGT GGTTGTCGATGACCGCAGGGGATTTCATCTAAGCCTACAGTAGTAGAGAG CGAGCTTTTATGAGTCGACGGCTCCAAGGAAGCCGAATTCAACGAGTTAC CAGGAGACGGATATCGGATCGTGTGTGTGGATTCCAGGGGGGGAGAAGAA AGTGCAGCTACTTGAGGTGCTCTGGATGTGAGCTTAGCTACTTCGTTGTC CTCGAAATGGGTTGGCGGGCTAGACTTTCCGAAGGGGGCGGGCGGCCTCT GAGACGCTGAGCGTGAGCCTCAGTTTTTTCTTATCTGAGTTTCAGGCATT ACACCGTTGACACAAAATACACGCATTCAAGTACATTTGTGTATATTTCT TGTTGCCCGAACGAGAGGTTCGGTTGAGCAGCAGTTGTGCGTCGTTGCTG AAATGGGGGCAATGTTATCATAGTGTTTACATTTTTTTTTTGCGCACGTC ATCGCCATTGTCAGCGTCGTAATCGTCGTTGTCGGGCGCTCTTCCGAGAA AATAGAGATAAAAAGAAGCACTACTGTCCTGTACTTACCATACATTGTAC GTGCAATGTACAGCTCCGTACCCATTTTTTTTTTAACTCAACTGTGTGGA GGAGATAATGTGACAAGGCCCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:899424..909096-

>mRNA_P-littoralis_Contig20.208.2 ID=mRNA_P-littoralis_Contig20.208.2|Name=mRNA_P-littoralis_Contig20.208.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1611bp|location=Sequence derived from alignment at P-littoralis_Contig20:899424..909096- (Pylaiella littoralis U1_48)
ATGACGAACGACGACTGGGATGGCGCCGCCTCGATGCATAAGGCGCTCAA
AGCCCTGGCCACATCCACTCGCCCCATCTCCGCCTCTAGAGTCAAGACAG
CGGCAGCGAAAGCTTTGGAAAATGTCAAGGAATACAAGCGCGTGGTTCAC
GCCATCGAGCGCTACATACGGAAAGCCCAGCCTCATCACCGCATCGGAGG
CTGTTTCGTGATCGACTCGGTGTGCCGGCAAGCGCAGTCGAAGTGGGGCC
ACAAGGACGTCTTCACACCCCGCTTCGCGCAGCGCATGGCCGAGACTACC
GAGACATTGAGACACGTTCCGGACAGAGATAAGCCGCCGGTGTTTCGCGT
AATCCGCGAGTGGCACGAAAAGGGTATGTTCAAGGGTCTCGAATCGTTTG
CCTCTGGTGGTGCCGGAGCTGCGGGTGGTGCCGCCGGTGCTGCTGAGAGT
TATTCGCACCCCCAACCCCCTGCCTCGCAAGCCGCGGTGTCTGCGTCTCC
CGCTCAGATGGGGCTCCCGCCTCCCACCGGAGTGATTCACCTTGGGCTCA
AGGTGGGAGACACGTACGGTAGCGCCTACCCGCCGCACTCCGCTAACGGT
GGCGGAGTTCCAGATGTTGGCGTCGACGCAGGGGCTCCGGCGACATACGC
CCCGTCCTTTGGGCAGCACAGTGGTAGCAGCCCGCCCGGAGGTGCTGCTG
CAAATGGAGCTGTCGGCGGTGGAGGTGCCGGCGTCGGCGGGTGGGGTGGG
GCAGCAGGGGATGGGCTAGACGAACCTTTGTCTGACTCAAGGTTCGTACC
CCAGGAAGCGCCGCTGCCGGAGCCTGACCACGCCCCCGTGGAGGGGGGCA
ACGCCGGGAGTGCCCTACAGCCGCAGATGATTCCGCCTCCGCCTCCGGGC
CCCCCTCCCCCGCTGATAGCAGCGGCGACGGGGGCGACGACCAACGGGTT
GCCTCCGGACATGTCGTTAGAGCAGCAGCTAGAGCTGCAGCTGGGGCGCC
AGCAGCAAGAGCAGCCGCCTCCGCCCCCTCCACCGCCCGCGGTAGAAGGT
GACGAGTCTGCGGAGGAGGAAGTGGAGCAGGAGGACGGGGGAAGCGGGGA
AGACGATATTCAGCCGCCGCCCCCGCCACCGCCGAAAACGGAGGGCAAAA
TCATGGAGCTTTGGAGCCTGCTGAACATGGCGCAGGCGTCCGGTGCGGCC
ACCACCGCCACGACCACCACGACTTCGGCGACGACCACGGCGACGAACGC
CGAGGCAGCGTCGGCGGACGCGGCGGCGGGAGACGCGTCCTCGTCGGCCG
GCAACGATGATGACGGCACCCAGCCGCCGCCCCCGCCCCCACCGCCGCCG
CCGCAGGACATGCAGATGTGTCTCGACCACGAAGACAGTCAGAACGATCT
CAACAACCCCCCCCCCCCCCCCCGCCAGAGAGGAGTGCGTCCGATCTCGG
TCAGCCGCCGCCGCCGCCGCCACCACCCGGAGAAGAGCCGGGGCCCGGGC
CGTCGCCGCCGCCGCCGCAGCAGCAGTACGATCCGTTCGCCGCTCCACCC
CGTGGAGGTGGTGGCGGGGGTATCCAGGAGCATCAGCAACAACAAGGCCC
GCACCAGATGA
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