mRNA_P-littoralis_Contig20.207.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: D8LJK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK8_ECTSI) HSP 1 Score: 329 bits (844), Expect = 4.740e-109 Identity = 183/348 (52.59%), Postives = 210/348 (60.34%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWNRCDIPALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRIATVSKDGSIKIYDRDSGGLIVDHAEPECGGYTGLAYQYDSSTGCPLLLASTITGGLYVFRLEEEKQEGKESGVGGGVDDGWRNMRAGCGGRLRCLGFVQGCQIL 1044
+YSCSRDTT+RQWNR I ALRVFEGHDLACT +ALS DEKTL SGS AWDV+TG+CT+S KVPRNLVTCL+ L+ PS S VVQ GLR ++TV+GYTFFP+ LD+S+D H+VLT CKGFNG GCETKLWDLR P+REYTGHTQDTTACVF+ SK+ GAR E + S S S IAT SKDG++KIYD G ++VDH EPECGGYTGLA Q DS TG P+ ASTITGGLY RLEE+ S G G G RLRC+GFV+G IL
Sbjct: 1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAIALSEDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGGPSSS----------------------VVQXXXXXXXXXXXXXXXGLRSSMTVDGYTFFPLFLDVSSDGHQVLTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDGGSGAR-------------EGGYGLSPAPWPSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGGPVFYASTITGGLYALRLEEKVATAGTSRTGLGEG----------GLRLRCVGFVRGNPIL 303
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A6H5JBE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE9_9PHAE) HSP 1 Score: 301 bits (771), Expect = 6.740e-98 Identity = 183/382 (47.91%), Postives = 210/382 (54.97%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWNRCDIPALRVFEGHDLACTDLALSA----------------------------------DEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRIATVSKDGSIKIYDRDSGGLIVDHAEPECGGYTGLAYQYDSSTGCPLLLASTITGGLYVFRLEEEKQEGKESGVGGGVDDGWRNMRAGCGGRLRCLGFVQGCQIL 1044
+YSCSRDTT+RQWNR I ALRVFEGHDLACT +ALS DEK L SGSRDTS+RAWDV+TG+C +S KVPRNLVTCL+ L S LSS V QGGEDL+LRVWD REGGLRP++T++GYTFFP LWDLR P+REYTGHTQDTTACVF+ SK+ GG G EN V S+S S S IAT SKDG++KIYD G ++VDH EPECGGYTGLA Q DS TG P+ ASTITGGLY RLEEE +S ++ G G RLRC+GFV+G IL
Sbjct: 1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAIALSEGDVPSQRKILPARQSILSKLFHDDDPPPYEHSLEDEKALYSGSRDTSIRAWDVQTGQCISSAKVPRNLVTCLKCL--SGELSSS--------------------VAQGGEDLKLRVWDAREGGLRPSMTIDGYTFFP---------------------------LWDLRSPGIPVREYTGHTQDTTACVFVTSKE-----GGDDGSGVE--------ENGYGVSPSPSTSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLEEEVATAAQSQT---------ELQEG-GLRLRCVGFVRGNPIL 310
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A835ZHR6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR6_9STRA) HSP 1 Score: 182 bits (463), Expect = 3.080e-52 Identity = 120/310 (38.71%), Postives = 156/310 (50.32%), Query Frame = 1
Query: 4 YSCSRDTTIRQWNRCDIPALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRIATVSKDGSIK--IYDRDSGGLIVDHAEPE--CGG-YTGLAYQYDSSTG-------CPLL-LASTITG 894
YS SRDTT+ QW + + P L + GH L + L LSADE L SGSRDTSVR WDV TG+ PRNLVTCL+ + + VVVQGGEDL+LR+WD R PA T++G+ +FP+CLD+S D + +LTG KGFN GCE +LWD R T ++EY GH QD TAC+ + +GGA + T SKD +IK ++ R+SG L+ D AEP C +TG Y S G P+L +AS++ G
Sbjct: 7 YSASRDTTLAQWGQGEGP-LATYRGHTLTVSALDLSADETHLWSGSRDTSVRLWDVSTGQQRGMVATPRNLVTCLKCMPGEEGTN---------------------VVVQGGEDLKLRLWDFRTPSSVPAQTLDGFVYFPLCLDVSEDGNYLLTGSKGFNSVGCEGRLWD-RRTGQVVQEYNGHAQDVTACLLAPAA-LAASSGGA------------------------------------VITASKDQTIKARVWGRESGQLLSDFAEPHRLCAATFTGGLYDLQLSEGEAGGETAAPVLSVASSVAG 256
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: K3WSF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF6_GLOUD) HSP 1 Score: 161 bits (408), Expect = 5.160e-43 Identity = 107/330 (32.42%), Postives = 150/330 (45.45%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWNRCDI------------PALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRI--------ATVSKDGSIKIYDRDSGGLIVDHAEPECGGYTGLAYQYDSSTGCPLLLASTITGGLYVFRLEEEKQ 930
IYSCSRDTTI + P GH L + +A++ DE +LCSG RDT WD+ TGR A +N++TC +++ P +VVQG EDL L++WD R PA + GY +F +C+D+S D + LT KGFNG GCE ++WD R T L E+ GH QDTT+C FL S GSSS+ S S + T SKDGS+K++D + ++ + EP G +T + DSST +LAST ++ F +++
Sbjct: 79 IYSCSRDTTIALTSHIASKSSSPSSSSRKQPQPVYLRGHHLNVSTIAVNDDETSLCSGGRDTQTIFWDLTTGRLKAKNTTSQNVITCSKWVPVEP------------------------LVVQGSEDLTLKLWDERTNLRAPAQSFHGYVYFALCVDVSPDGNYFLTSSKGFNGVGCEVRIWD-RRTGKQLYEFNGHQQDTTSCCFLPS------------------------------ATGSSSNDSVTSPADSVRASAIPIPVTASKDGSVKVWDAATSSVLCEALEPSGGMFTSIC-AVDSST----VLASTFADEVHQFAFNGDEK 348
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: UPI00109BE923 (WD repeat-containing protein 31 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE923) HSP 1 Score: 139 bits (350), Expect = 1.490e-35 Identity = 79/197 (40.10%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWN--RCDIPALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFL 585
+YS SRD TI+ W C + +EGH L T + L+ D+ L SGSRD SVR WDV TG+C + +V RNLV+C++++ S VVQ GED ++VWD R L PA T +F C D S D +LT GFN GCE LWDLR + +Y GHTQ +AC+FL
Sbjct: 3 VYSSSRDKTIKLWKIGDCHQDPIDTYEGHKLVVTGIDLNNDQTVLFSGSRDNSVRLWDVVTGQCISHNEVTRNLVSCVKWIPQSHE------------------------VVQTGEDKMVKVWDTRT--LTPAFTFPPKQYFQTCCDCSDDGKYILTCNNGFNRSGCEATLWDLRQKKQ-VYQYVGHTQTASACIFL 172
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A5D6Y005_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y005_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.430e-35 Identity = 94/286 (32.87%), Postives = 130/286 (45.45%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWNRC--------DIPALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRIATVSKDGSIKIYDRDSGGLIVDHAEPECGGYTGL 834
+YSCSRDTTI + PA GH+L +A++ E TLCSG RDT WD+ TG+ A +N+VTC +++ P +VVQG EDL L+ WD R PA GY +F + +D+S D +LT KGFNG GCE ++WD R T L E++GH QD T+C FL G+S S S T SKDG++K++D + ++ + +EP G +TGL
Sbjct: 126 LYSCSRDTTIALTSHIAPPSSPSRKQPASVQLRGHNLNVATIAVNDAETTLCSGGRDTQTIFWDLVTGKLKAKNTTSQNVVTCSKWIPLEP------------------------LVVQGSEDLTLKFWDERTELRTPAQIFHGYVYFALSVDVSPDTSYILTSSKGFNGVGCEVRVWD-RRTGKQLLEFSGHQQDATSCCFLP---------------------------------GTSDSQSAIPIP---VTASKDGTVKVWDAAASRVLCEASEPTGGMFTGL 350
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A1V9Z8M6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8M6_9STRA) HSP 1 Score: 140 bits (353), Expect = 6.390e-35 Identity = 95/322 (29.50%), Postives = 139/322 (43.17%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWNRCDIPA------LRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKG-------------FNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVTGGARGXXXXXSRDEKGTENVGDVCHGSSSSFSCASHTRRIATVSKDGSIKIYDRDSGGLIVDHAEPECGGYTGLAYQYDSSTGCPLLLASTITGGLYVF 909
+Y+CSRDTTI ++ R D + F GH L+ + + ++ E L SGSRDTSV WDV T +N+VTC+ ++ +L V QGGEDLR+R+WD R P T+EGY +FP+ LD+S D + +LT KG FNG GCE ++WD R T + E GH QD TAC ++ +++ + T SKD S+++++ SG L+ + G +T L G + S+ TG L V+
Sbjct: 97 LYACSRDTTISRY-RLDFDGAVNTVKMESFAGHSLSVSAITINGSETQLASGSRDTSVSLWDVATTTQLQHTTTSQNIVTCMAWVPIHDTL-----------------------VAQGGEDLRVRIWDSR-AWKSPVQTIEGYVYFPLSLDVSDDGNYILTSSKGTILSWICWLMPLGFNGVGCEGRVWD-RRTGKQVCEMAGHLQDATACSYIKQRNEY------------------------------------------VLTASKDSSLRVWNSASGALVSSTYDHALGMFTALTSLPPDDAGIVRIFTSSFTGHLAVY 350
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A485KVW2_9STRA (Aste57867_12386 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVW2_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.270e-34 Identity = 81/216 (37.50%), Postives = 109/216 (50.46%), Query Frame = 1
Query: 1 IYSCSRDTTIRQW------NRCDIPALRV------FEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVT 612
+YSCSRDTTI + N P+ + GH L + LA++ E TL SGSRDT V WDV T +N+VTC+ ++ + VV QGGEDLR+R+WD R P T+EGY +FP+ + S D H +LT KGFN GCE ++WD R T + E GH QD TAC ++ ++ EG+T
Sbjct: 117 LYSCSRDTTIARHTFGSLANDPTTPSPTAVTTHPPYHGHTLTVSALAINESESTLASGSRDTGVSLWDVATSMRRQHTITSQNIVTCMAWVPRDAN-----------------------VVAQGGEDLRVRLWDAR-AWKAPTQTIEGYIYFPLSIACSDDGHYLLTSSKGFNAVGCEGRVWD-RRTGKQVAEMRGHAQDATACAYIPGRNHEGIT 307
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC) HSP 1 Score: 139 bits (349), Expect = 1.350e-34 Identity = 81/208 (38.94%), Postives = 111/208 (53.37%), Query Frame = 1
Query: 1 IYSCSRDTTIRQWN--RCDIPAL--RVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVT 612
+Y+CSRDTTI Q D+PA + F GH L+ + +A++A E L SGSRDT WDV TG +N+VTC+ ++ +L V QGGEDL +R+WD R PA T++GY +FP+ +D S D + +LT KGFNG GCE ++WD R T + E H QD TAC ++ K+ VT
Sbjct: 93 LYACSRDTTISQQAIASSDVPAAAPQSFTGHTLSVSAIAINAPETHLASGSRDTGTSLWDVTTGTRVQHTTTSQNIVTCMTWVPQCETL-----------------------VAQGGEDLCVRLWDARSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWD-RRTGKLVTEMHVHLQDATACAYVRHKNAFAVT 275
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Match: T0QNJ3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNJ3_SAPDV) HSP 1 Score: 138 bits (347), Expect = 3.680e-34 Identity = 80/207 (38.65%), Postives = 111/207 (53.62%), Query Frame = 1
Query: 1 IYSCSRDTTIRQW--NRCDIP-ALRVFEGHDLACTDLALSADEKTLCSGSRDTSVRAWDVETGRCTASGKVPRNLVTCLRFLAPSPSLSSESRLESXXXXXXXXXXXXXXVVVQGGEDLRLRVWDLREGGLRPAVTVEGYTFFPICLDISADCHEVLTGCKGFNGEGCETKLWDLRHTASPLREYTGHTQDTTACVFLDSKDKEGVT 612
+Y+CSRDTTI Q + D P A + F GH L+ + LA++A E L SGSRDT WDV T +N+VTC+ ++ +L + QGGEDL +R+WD R PA T++GY +FP+ +D S D + +LT KGFNG GCE ++WD R T + E GH QD +AC ++ K+ VT
Sbjct: 98 LYACSRDTTISQHVLSSSDAPTAPQSFTGHTLSVSALAINAAESNLASGSRDTGTSLWDVTTRARVQHTTTSQNIVTCMTWVPQCETL-----------------------LAQGGEDLCVRLWDTRSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWD-RRTGKLVTEMHGHLQDASACAYMRHKNAYAVT 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.207.1 >prot_P-littoralis_Contig20.207.1 ID=prot_P-littoralis_Contig20.207.1|Name=mRNA_P-littoralis_Contig20.207.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp IYSCSRDTTIRQWNRCDIPALRVFEGHDLACTDLALSADEKTLCSGSRDTback to top mRNA from alignment at P-littoralis_Contig20:892466..897352+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig20.207.1 ID=mRNA_P-littoralis_Contig20.207.1|Name=mRNA_P-littoralis_Contig20.207.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4887bp|location=Sequence derived from alignment at P-littoralis_Contig20:892466..897352+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig20:892466..897352+ >mRNA_P-littoralis_Contig20.207.1 ID=mRNA_P-littoralis_Contig20.207.1|Name=mRNA_P-littoralis_Contig20.207.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1047bp|location=Sequence derived from alignment at P-littoralis_Contig20:892466..897352+ (Pylaiella littoralis U1_48)back to top |