mRNA_P-littoralis_Contig20.203.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: D8LJL1_ECTSI (6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL1_ECTSI) HSP 1 Score: 546 bits (1406), Expect = 2.210e-191 Identity = 282/330 (85.45%), Postives = 305/330 (92.42%), Query Frame = 2
Query: 530 LRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGVSWGHRRETKHAGRALLEDLIKVEEAGDDVEILRRSLAPIRTLGKDAAILARAAAESGASASLLESARSQIDETIRSGYSDCSFASVATVIEEEFCKPKDKDG 1519
LRVGVVGLGRMGSGMALN+AKAGFPL+++DAEEGRTQELRE WVKDKHLPTGPGGLSTPHLHL+ESPADVMLASDVCLVCVHTEQQS+EALAGEDGLLAVG++ MADKIIVDHGTVSP FA+ MS+ VIKGGGAFLDAPISGGPQGALEGTLSIMVGGK EHL TCLPV+EAMGSR+EHMGG+GAGAAAKLVNQHLVI NTVAACEAYVLARRLGLSD KLK LLG SWGH + +L DL+KVEEAGDDVE+LRRSLAPIRTLGKDAAILARAAAESGAS+SLLESA++QIDET+RSGYSDCSFASVAT IEEEFC+ DK+G
Sbjct: 2 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDAEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKIIVDHGTVSPSFARSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKGEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVIINTVAACEAYVLARRLGLSDMGKLKALLGASWGHSQMLDQ----VLGDLLKVEEAGDDVEVLRRSLAPIRTLGKDAAILARAAAESGASSSLLESAQAQIDETVRSGYSDCSFASVATTIEEEFCEAVDKEG 327
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A6H5JLP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP7_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 8.890e-143 Identity = 208/234 (88.89%), Postives = 222/234 (94.87%), Query Frame = 2
Query: 530 LRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGVSWGHRR 1231
LRVGVVGLGRMGSGMALN+AKAGFPL+++D EEGRTQELRE WVKDKHLPTGPGGLSTPHLHL+ESPADVMLASDVCLVCVHTEQQS+EALAGEDGLLAVG++ MADKIIVDHGTVSP FAK MS+ VIKGGGAFLDAPISGGPQGALEGTLSIMVGGK+EHL TCLPV+EAMGSR+EHMGG+GAGAAAKLVNQHLVI+NTVAACEAYVLARRLGL DT KLK LL SWGHRR
Sbjct: 2 LRVGVVGLGRMGSGMALNVAKAGFPLAIYDTEEGRTQELREGWVKDKHLPTGPGGLSTPHLHLLESPADVMLASDVCLVCVHTEQQSVEALAGEDGLLAVGSKVMADKIIVDHGTVSPSFAKSMSKAVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKEEHLKTCLPVLEAMGSRIEHMGGYGAGAAAKLVNQHLVITNTVAACEAYVLARRLGLGDTAKLKALLEASWGHRR 235
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A2D8MY99_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D8MY99_9BACT) HSP 1 Score: 167 bits (423), Expect = 2.480e-44 Identity = 113/302 (37.42%), Postives = 166/302 (54.97%), Query Frame = 2
Query: 530 LRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGVSWGHRRETKHAGRALLEDLIKVEEAGDDVEILRRSLAPIRTLGKDAAILARAA-AESGASASLLESARSQIDET 1432
++VG GLG MG GMA N+ +AGF L V++ + + L + V ME+P ++ A+D+ L C+ + E E+G+LA +A KI VDHGTV ++ + ++ G AFLDAPISGGP+GA GTL+IM GG +E + PV EAMGS+V HMG GAG A KL NQ LV N++A CEA +AR +G+ D +L+ +L +WG R + G + + +E G + + + L+ I LGKD+ + +AA A G L+++ S+ D T
Sbjct: 1 MKVGFAGLGNMGGGMARNVLQAGFELLVYNRTRSKAEALAGAEV-------------------METPRELARAADIILTCLADIAVTRELFLEEEGILA---EAVAGKIFVDHGTVDLDTSRALHAACLERGAAFLDAPISGGPEGASAGTLAIMAGGDREVFERARPVFEAMGSKVVHMGPAGAGTATKLANQLLVGVNSLACCEALTMARGVGV-DLEQLQDVLASAWGQSRMLERCGPIIARE--GYDEPGAPLRNILKDLSIITRLGKDSGLSVKAADAALGVYQGLVDAGMSESDMT 277
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A356FFG8_9BACT (2-hydroxy-3-oxopropionate reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFG8_9BACT) HSP 1 Score: 167 bits (423), Expect = 2.480e-44 Identity = 112/322 (34.78%), Postives = 167/322 (51.86%), Query Frame = 2
Query: 530 LRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGVSWGHRRETKHAGRALLEDLIKVEEAGDDVEILRRSLAPIRTLGKDAAILARAAAESGASASLLESARSQIDETIRSGYSDCSFASVATVIEEEF 1495
++VG GLG MG GMA N+ +AGF L V++ + + L + + M++P D++ +D+ LVC+ E GE+G++ + KI VDHGTV ++D+ G FLDAPISGGP+GA GTL+IM GG+ + + PV +AMGS+V HMG GAG AAKL NQ +V N++A CEA +AR++G +D KL+ LL +WG R + G + + +E G AP+R + KD +I+ R ESG S E+A + + +G S+ + + E
Sbjct: 1 MKVGFAGLGNMGGGMARNVLQAGFELFVYNRTRVKAEALEGAVI-------------------MDAPRDLVREADLVLVCLADIASGREFFLGEEGVV---DDSVEGKIFVDHGTVDLATSRDLHAACGAQGAGFLDAPISGGPEGASAGTLAIMAGGEPDIFERARPVFDAMGSKVVHMGPAGAGTAAKLANQLMVGVNSLACCEALTMARQVG-ADLEKLQDLLANAWGQSRMLERCGPIIARE--GYDEPG----------APLRNILKDLSIITRQGKESGLSVRAAEAAFGVYQQLVDAGLSESDMTAACRCVSGEL 287
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A7C7KWK6_9BACT (2-hydroxy-3-oxopropionate reductase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C7KWK6_9BACT) HSP 1 Score: 149 bits (377), Expect = 1.270e-37 Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 2
Query: 518 MSPTLRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGL 1177
M+ R+G +GLG MG MA N+ AG+PL+V++ + EL E+ + E P DV +SDV + V + + G+DG++ G RE ++VD T+SPR A++++Q +++ G AFLDAP+SGG +GA+EGTLSIMVGG + + CLP+ + +G + HMGG G G KL NQ + + N +A CE V A ++GL
Sbjct: 1 MATAERIGFIGLGIMGKPMARNLLNAGYPLTVWNRTRCKMDELVEAGAQPA-----------------ECPRDVARSSDVVITMVADSPDVQQVILGDDGVIE-GVRE--GMVVVDMSTISPRVARELAQALLRKGVAFLDAPVSGGQRGAIEGTLSIMVGGDERAFERCLPIFQVLGKTIVHMGGSGMGQTTKLANQIICVLNILAMCEGLVFAAKMGL 200
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A7C5A1E3_9CHLR (NAD(P)-dependent oxidoreductase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5A1E3_9CHLR) HSP 1 Score: 147 bits (372), Expect = 7.200e-37 Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 2
Query: 533 RVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVK 1192
+VG +GLG MG GMA NI KAGFPL+V++ + + L + K ++PAD+ SD+ L+CV + GE+G+LA G + A +++D T+SP + +++ + G A LDAP+SGG +GA GTLSIMVGG+ + ++ +PV EAMG ++ H+G GAG KLVNQ LV+ N +A CEA + A+ G+ DT K
Sbjct: 4 QVGFIGLGIMGQGMAHNILKAGFPLTVWNRTASKAEPLLAAGAKAG-----------------QNPADIAAHSDIVLICVSDTPDVENVILGENGVLA-GVK--AGSLVIDCSTISPIATRKLAEKLAAAGAAMLDAPVSGGSEGAARGTLSIMVGGETKDVERAMPVFEAMGKKITHVGPVGAGQTVKLVNQILVVGNCLAMCEALLFAQAGGV-DTAK 202
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: I0I3Y9_CALAS (Putative 2-hydroxy-3-oxopropionate reductase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I3Y9_CALAS) HSP 1 Score: 146 bits (368), Expect = 2.420e-36 Identity = 87/215 (40.47%), Postives = 123/215 (57.21%), Query Frame = 2
Query: 533 RVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGL 1177
R+G +GLG MG GMA N+ +AGFPL+V++ R QEL H PADV SD+ ++CV E + GE G++ G R +++D T+SP+ + ++ + + G LDAP+SGG +GA +GTLSIMVGG+ E + LPV +AMG + H+GG GAG KLVNQ LV+ N +A CEA +LA+ G+
Sbjct: 4 RIGFIGLGIMGRGMAANLLRAGFPLTVWNRTTTRMQELVAQGA-----------------HAGAGPADVAERSDIVVICVSDTPDVEEVILGERGVIH-GARP--GSLVIDCSTISPKATRRIAGRLAEQGIFMLDAPVSGGSEGAAKGTLSIMVGGESEQFERALPVFQAMGKTITHVGGHGAGQTVKLVNQALVVGNCIAMCEALMLAQAGGV 198
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A7S2FHY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FHY7_9STRA) HSP 1 Score: 145 bits (367), Expect = 5.940e-36 Identity = 113/291 (38.83%), Postives = 156/291 (53.61%), Query Frame = 2
Query: 536 VGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALA--GEDGLLAVGTREMADK--IIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGV---SWGHRRETKHAGRALLEDLIKVEEAGDDVEILRR-SLAPIRTLGKDAAILARAAAESG 1384
VG++G G MG GMA ++A+A + +D++ Q K + PG ++ S ADV D V V ++ E DG+L E A K +I+ GT++P FAK++ + + G FLDAP+SGGP+GA GTL+IMVGG KE + VM+ +GSR H+GG GAGAAAKLVNQ L SN +AA EA LAR +G+ L+TLL SWG+ + +G + E L + + D VE L S AP+R KD + AA E+G
Sbjct: 13 VGLIGAGNMGRGMAASLARANTRVIQYDSDAFSLQ---------KSVEQAPG-----LIYSATSVADVCERIDGGTVVVSVSGEAAERAVFFAADGIL-----EQARKGSVILGCGTMTPSFAKEIHAALAEQGLRFLDAPVSGGPEGAANGTLTIMVGGGKETFEASCEVMDTLGSRSVHLGGPGAGAAAKLVNQLLTASNALAASEALALARAMGIDSQDSLRTLLSTLETSWGNSTMLQRSGGIVAEAL---DGSKDPVEALAVISKAPLRNFAKDLDFVLAAADEAG 281
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A7C3N901_9CHLR (NAD(P)-dependent oxidoreductase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3N901_9CHLR) HSP 1 Score: 145 bits (365), Expect = 6.290e-36 Identity = 92/230 (40.00%), Postives = 132/230 (57.39%), Query Frame = 2
Query: 533 RVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLGVSWG 1222
RVG VGLG MG GMA N+ KAGF L+V++ + L E+ K ++PADV SD+ ++CV + G DGLLA G R A +++D T+SP+ +++ + + G A LDAP+SGG +GA +GTLSIM+GG+ + ++ +PV EAMG ++ H+GG GAG KLVNQ LV+ + +A EA + A+ G+ KTL VS G
Sbjct: 4 RVGFVGLGIMGQGMAHNLLKAGFALTVWNRTASKMDPLVEAGAKAG-----------------KNPADVAAQSDIVVICVSDTPDVEAVILGSDGLLA-GAR--AGSLVIDCSTISPQTTVSLAEKLAEKGVAMLDAPVSGGSEGAAKGTLSIMIGGEAKDVERAMPVFEAMGKKITHVGGHGAGQTVKLVNQILVVGHALAMSEALLFAQAGGVDLN---KTLEAVSAG 210
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Match: A0A7C6PTK3_9FIRM (2-hydroxy-3-oxopropionate reductase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6PTK3_9FIRM) HSP 1 Score: 144 bits (364), Expect = 9.620e-36 Identity = 87/226 (38.50%), Postives = 130/226 (57.52%), Query Frame = 2
Query: 533 RVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDKHLPTGPGGLSTPHLHLMESPADVMLASDVCLVCVHTEQQSIEALAGEDGLLAVGTREMADKIIVDHGTVSPRFAKDMSQTVIKGGGAFLDAPISGGPQGALEGTLSIMVGGKKEHLDTCLPVMEAMGSRVEHMGGWGAGAAAKLVNQHLVISNTVAACEAYVLARRLGLSDTVKLKTLLG 1210
+VG +GLG MG MA N+ KAG+ L+VF+ +T+EL+ + K + SPA V SD+ + V E + G++G++ G+R I++D T+SP+ +++ + + G LDAP+SGG +GA+EGTLSIMVGGKKE + CLP++++MG ++ H+G GAG AKL NQ L N +A CE VLA + GL ++ L G
Sbjct: 4 KVGFIGLGIMGKPMAKNVLKAGYELTVFNRTSSKTEELKRTGAK-----------------VASSPAQVARESDIVITMVSDSPDVREVVLGKNGIIE-GSRP--GLILIDMSTISPQVTVEINHELGRRGVEMLDAPVSGGEKGAIEGTLSIMVGGKKEVFERCLPILKSMGRKITHIGPSGAGQWAKLCNQVLASLNLLAVCEGLVLAAKAGLDINKVIEALSG 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.203.1 >prot_P-littoralis_Contig20.203.1 ID=prot_P-littoralis_Contig20.203.1|Name=mRNA_P-littoralis_Contig20.203.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=339bp MSPTLRVGVVGLGRMGSGMALNIAKAGFPLSVFDAEEGRTQELRESWVKDback to top mRNA from alignment at P-littoralis_Contig20:878534..887023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig20.203.1 ID=mRNA_P-littoralis_Contig20.203.1|Name=mRNA_P-littoralis_Contig20.203.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8490bp|location=Sequence derived from alignment at P-littoralis_Contig20:878534..887023- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig20:878534..887023- >mRNA_P-littoralis_Contig20.203.1 ID=mRNA_P-littoralis_Contig20.203.1|Name=mRNA_P-littoralis_Contig20.203.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1017bp|location=Sequence derived from alignment at P-littoralis_Contig20:878534..887023- (Pylaiella littoralis U1_48)back to top |