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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 213 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 213 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789972.1407826-CDS-P-littoralis_Contig20:92719..92776 | 1680789972.1407826-CDS-P-littoralis_Contig20:92719..92776 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 92720..92776 - |
| 1680789972.149848-CDS-P-littoralis_Contig20:93584..93638 | 1680789972.149848-CDS-P-littoralis_Contig20:93584..93638 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 93585..93638 - |
| 1680789972.1586688-CDS-P-littoralis_Contig20:94449..94503 | 1680789972.1586688-CDS-P-littoralis_Contig20:94449..94503 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 94450..94503 - |
| 1680789972.1725256-CDS-P-littoralis_Contig20:97887..97935 | 1680789972.1725256-CDS-P-littoralis_Contig20:97887..97935 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 97888..97935 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.18.2 >prot_P-littoralis_Contig20.18.2 ID=prot_P-littoralis_Contig20.18.2|Name=mRNA_P-littoralis_Contig20.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=71bp
PTPSPVDDTPQPTPALVDPTPSPVDDTPQPTPALVDPTPSPVDDTPEPTP
ALVDPTPSPVDDTPQPTPALV back to topmRNA from alignment at P-littoralis_Contig20:92720..97935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig20.18.2 ID=mRNA_P-littoralis_Contig20.18.2|Name=mRNA_P-littoralis_Contig20.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5216bp|location=Sequence derived from alignment at P-littoralis_Contig20:92720..97935- (Pylaiella littoralis U1_48)
CCAACACCGTCGCCCGTCGACGATACGCCGCAGCCCACACCAGCACTGGT
GAGTGTCGTTGCCCCATTGGTTGTATGTCGACTTTTTTGCCCCCATGACC
AAAGTTGCACAGACCATGGTGCCAGCATACACGCATCGAAGGTGTGCCTC
CCCGTATCGCCGTACCACAGCACTTGAGGTGGCGACTTGCTGCTATACCT
CGTGTATTCTAGCGAGGTACTTGTGAAGTATCATACCAATATTCAACTTT
GCTTCCATCGCATTTCGGCTGGGCCGTTCAAAACAGCGGCTCAGACGAGA
CTCCAGCTTGTGCTGAACATGTTTCCCACAACAGGAAAGGCTATGAGAAG
GAATCTTCGTGCACCGTGCATATGAACTCCTTGCGCTCCGGCCCTTGGCC
CGTTCACTACTGTCGCTAAAACCTCATCAGTGCTAGCAAACGCCGCGGGT
GTTCGTCGGTTTCCCAACGTGGAAGTGGCGCCCTTGGGCGTTCACCGCGT
GACCAGCGTCCTGAAAGCAAAAACCGGGTGTCGGGGCGCCCCCTAGGGCG
TCATGAAGGAACAACGCCCGCCACCCCCTCCCACTACAGCCGCGCGTGAG
CCAGTGCTCTTCATATGATAACCCAGCAACATGACACGTTACCTATCAAA
AAGTTCTCAAGACCACCCCGCCTGTAGCTTATTTTACCTCATTCACATGG
ATCGGGTCCAACGGAGGGCGTAATTGGCATGGTTGTTTTTCCCCGTGGTG
TCCGCCGGCAATATTTTTCAGTGCTGACTGTTGTTTATAACCCCTACGCC
CTCGTCCGACATGTCGTCTGTTCTCCGTTCGTACATCCACCGCCGACGCC
GGCGCCTCAGGTGGACCCAACACCGTCGCCCGTCGACGATACGCCGCAGC
CCACACCAGCGCTGGTGAGTGTCGTTGCCCCATTGGTTGTATGTCGACTT
TTTTGCCCTCAAAGTTGCACAGACCATGGTGCCAGCATACACGCGTCAAA
CGTGTGCCTCCCCGTATCGCCGTACCACAGCTCGAGGTGGCGACTTGCTG
CTATACCTCGTTTATTCTAGCGAGGTACTTGTGAAGTATCATACCAATAT
TCAACTTTGCTTCCATCGCATTTCGGCTGGGCCGTTCAAAACAGCGGCTC
AGACAAGACTCCAGCTTGTGCTGAACATGTTTCCCACAACAGGAAGGGCT
ATGAGAAGGAATCTTCGTGCACCGTGCATATGAACTCCTTGCGCTCCGGC
CCTTGGCCCGTTCACTACTGTCGCTAAAACCTCATCAGTGCTAGCAAACG
CCGAGGGTGTTCGTCGGTTTCCCAACGTGGAAGTGGCGCCCTTGGGCGTT
CACCGCGTGACCAGCGTCCTGAAAGCAAAAACCGGGTGTCGGGGCGCTCC
CTAGGGCGTCATGAAGGAACAACGCCCGCCACCCCCTCCCACTACAGCCG
CGCGTGAGCCAGTGCTCATCATATGATAACCCAGCAACATGACACGTTAC
CTATCAAAAAGTTCTCAAGACCACCCCGCCTGTAGCTTATTTTACCTCAT
TCACATGGATCGGGTCCAACGGAGGGCGTAATTGGCATGGTTGTTTTCCC
CGTGGTGTCCGCCGGCAATATTTTTCAGTGCTGACTGTTGTTTATAACCC
CTACGCCCTCGTCCGACATGTCGTCTGTTCTCCGTTCGTACATCCACCGC
CGACGCCGGCGCCTCAGGTGGATCCAACACCGTCGCCCGTCGACGATACG
CCGCAGCCCACACCAGCGCTGGTGAGTGTCGTTGCCCCATTGGTTGTATG
TCGACTTTTTTGCCCTCAAAGTTGCACAGACCATGGTGCCAGCATACACG
CGTCAAAGGTGTGCCTCCCAGAATCGCCGTACCACAGCTCGAGGTGGCGA
CTTGCTGCTATACCTCGTGTATTCTAGCGAGGTACTTGTGAAGTATCATA
CCAATGTTCAACTTTGCTTCCATCGCATTTCGGCTGGGCCGTTCAAAACA
GCGGCTCAGACAAGACTCCAGCTTGTGCTGAACATGGTTCCCACAACAGG
AAGGGCTATGAGAAGGAATCTTCGTGCACCGTGCATATGAACTCCTTGCG
CTCCGGCCCTTGGCCCGTTCACTACTGTCGCTAAAACCTCATCAGTGCTA
GCAAACGCCGAGGGTGTTCGTCGGTTTCCCAACGTGGAAGTGGCGCCCTT
GGGCGTTCACCGCGTGACCAGCGTCCTGAAAGCAAAAACCGGGTGTCGGG
GCGCTCCCTAGGGCGTCATGAAGGAACAACGCCCGCCACCCCCTCCCACT
ACAGCCGCGCGTGAGCCAGTGCTCATCATATGATAACCCAGCAACATGAC
ACGTTACCTATCAAACAGTTCTCAAGACCACCCCGCCTGTAGCTTATTTT
ACCTTATTCTCATGGATCGGGTCCAACGGAGGGCGTAATTGGCATGGTTG
TTTTTCCCCGTGGTGTCTGCCGGCAATATTTTTCAGTGCTGACTGTTGTT
TATAACCCCTACGCCCTCGTCCGACATGTCGTCTGTTCTCCGTTCGTACA
TCCACCGCCGACGCCGGCGCCTCAGGTGGATCCAACACCGTCGCCCGTCG
ACGATACGCCGCAGCCCACACCAGCGCTGGTGAGTGTCGTTGCCCCATTG
GTTGTATGTCGACTTTTTTGCCCTCAAAGTTGCACAGACCATGGTGCCAG
CATACACGCGTCAAAGGTGTGCCTCCCAGAATCGCCGTACCACAGCTCGA
GGTGGCGACTTGCTGCTATACCTCGTTTATTCTAGCGAGGTACTTGTGAA
GTATCATACCAATATTCAACTTTGCTTCCATCGCATTTCGGCTGGGCCGT
TCAAAACAGCGGCTCAGACAAGACTCCAGCTTGTGCTGAACATGTTTCCC
ACAACAGGAAAGGCTATGAGAAGGAATCTTCGTGCACCGTGCATATGAAC
TCCTTGCGCTCCGGCCCTTGGCCCGTTCACTACTGTCGCTAAAACCTCAT
CAGTGCTAGCAAACGCCGAGGGTGTTCGTCGGTTTCCCAACGTGGAAGTG
GCGCCCTTGGGCGTTCACCGCGTGACCAGCGTCCTGAAAGCAAAAACCGT
GTGTCGGGGCGCCCCCTAGGGCGTCATGAAGGAACAACGCCCGCCACCCC
CTCCCACTACAGCCGCGCGTGAGCCAGTGCTCTTCATATGATAACCCAGC
AACATGACACGTTACCTATCAAAAAGTTCTCAAGACCACCCCGCCTGTAG
CTTATTTTACCTCATTCACATGGATCGGGTCCAACGGAGGGCGTAATTGG
CATGGTTGTTTTCCCCGTGGTGTCCGCCGGCAATATTTTTCAGTGCTGAC
TGTTGTTTATAACGCCTACGCCCTCGTCCGACATGTCGTCTGTTCTCCGT
TCGTACATCCACCGCCGACGCCGGCGCCTCAGGTGGATCCAACACCGTCG
CCCGTCGACGATACGCCGCAGCCCACACCAGCACTGGTGAGTGTCGTTGC
CCCATTGGTTGTATGTCGACTTTTTTGCCCCCATGACCAAAGTTGCACAG
ACCATGGTGCCAGCATACACGCGTCAAAGGTGTGCCTCCCAGTATCGCCG
TACCACAGCTCGAGGTGGCGACTTGCTGCTATACCTCGTGTATTCTAGCG
AGGTACTTGTGAAGTATCATACCAATGTTCAACTTTGCTTCCATCGCATT
TCGGCTGGGCCGTTCAAAACAGCGGCTCAGACGAGACTCCAGCTTGTGCT
GAACATGGTTCACACAACAGGAAAGGGCTATGAGAAGGAATCTCGTGCAC
CGTGCATATGAACTCCTTGCGCTCCGGCCCTTGGCCCGTTCACTACTGTC
GCTAAAACCTCATCAGTGCTAGCAAACGCCGCGGGTGTTCGTCGGTTTCC
CAACGTGGAAGTGGCGCCCTTGGGCGTTCACCGCGTGACCAGCGTCCTGA
AAGCAAAAACCGGGTGTCGGGGCGCCCCCTAGGGCGTCATGAAGGAACAA
CGCCCGCCACCCCCTCCCACTACAGCCGCGCGTGAGCCAGTGCTCTTCAT
ATGATAACCCAGCAACATGACACGTTACCTATCAAAAAGTTTCTCAAGAC
CACCCCGCCTGTAGCTTATTTTACCTCATTCACATGGATCGGGTCCAACG
GAGGGCGTAATTGGCATGGTTGTTTTTCCCCGTGGCGTCCGCCGGCAATA
TTTTTCAGTGCTGACTGTTGTTTATAACCCCTACGCCCTCGTCCGACATG
TCGTCTGTTCTCCGTTCGTACATCCACCGCCGACGCCGGCGCCTCAGGTG
GATCCAACACCGTCGCCCGTCGACGATACGCCGGAGCCCACACCAGCACT
GGTGAGTGTCGTTGCCCCATTGGTTGTATGTCGACTTTTTTGCCCCCATG
ACCAAAGTTGCACAGACCATGGTGCCAGCATACACACATGAAACGTGTGC
CTCCCCGTATCGCTACCACAGCTCGAGGTGGCGACTTGCTGCTATACCTC
GTGTATTTTAGCGAGGTACTTGTGAAGTATCATACCAATATTCAACTTTG
CTTCCATCGCATTTCGGCTGGGCCGTTCAAAACAGCGGCTCAGACAAGAC
TCCAGCTTGTGCTGAACATGTTTCCCACAACAGGAAAGGCTATGAGAAGG
AATCTTCGTGCACCGTGCATATGAACTCCTTGCGCTCCGGCCCTTGGCCC
GTTCACTACTGTCTCTAGAACCTCATCAGTGCTAGCAAACGCCGCGGGTG
TTCGTCGGTTTCCCAACGTGGAAGTGGCGCCCTTGGGCGTTCACCGCGTG
ACCAGCGTCCTGAAAGCAAAAACCGCGTGTCGAGGCGCTCCCTAGGGCGT
CATGAAGGAACAACGCCCGCCACGCCCTCCCACTACAGCCGCGCGTGAGC
CAGTGCTCTTCATATGATAACCCAGCAACATGACACGTTACCTATCAAAA
AGTTCTCAAGACCACCCCGCCTGTAGCTTATTTTACCTCATTCTCATGGA
TCGGGTCCAACGGAGGGCGTAATTGGCATGGTTGTTTTTCCCCGTGGTGT
CTGCCGGCAATATTTTTCAGTGCTGACTGTTGTTTATAACCCCTACGCCC
TCGTCCGACATGTCGTCTGTTCTCCGTTCGTACATCCACCGCCGACGCCG
GCGCCTCAGGTGGACCCAACACCGTCGCCCGTCGACGATACGCCGCAGCC
CACACCAGCACTGGTG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig20:92720..97935- >mRNA_P-littoralis_Contig20.18.2 ID=mRNA_P-littoralis_Contig20.18.2|Name=mRNA_P-littoralis_Contig20.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=213bp|location=Sequence derived from alignment at P-littoralis_Contig20:92720..97935- (Pylaiella littoralis U1_48)
CCAACACCGTCGCCCGTCGACGATACGCCGCAGCCCACACCAGCACTGGT
GGATCCAACACCGTCGCCCGTCGACGATACGCCGCAGCCCACACCAGCAC
TGGTGGATCCAACACCGTCGCCCGTCGACGATACGCCGGAGCCCACACCA
GCACTGGTGGACCCAACACCGTCGCCCGTCGACGATACGCCGCAGCCCAC
ACCAGCACTGGTG back to top
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