mRNA_P-littoralis_Contig20.174.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.174.1
Unique NamemRNA_P-littoralis_Contig20.174.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A6H5KYT8_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYT8_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 8.250e-129
Identity = 213/298 (71.48%), Postives = 231/298 (77.52%), Query Frame = 1 
Query:   97 ALATAAGRLAPGGAFAFVAPPSPAAAAFGRTQRQHLKQLQLYHNKGISQHPASTTRHPPGSLNMMMSSAASPSPAAKPVLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASKEG 990
            A+A AAG L PG   AFVA  SP     G  QR   +  Q          PA T+RH   SL+M +S      P AK VLNDGER KLNDG D  FY YPR+CYHVD GFL HLTELYRERIPAGGAVLD+MSSWVSHLPP+V YERVDGHGMN EELGRN RLDTKRVWDLNA+P LPF+DA+YDAV+C VSVQYLQ PEAVF DV RVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGR++LVS YF + G F  PE+VER+A DSAGFFEGFADMFGMVG GDPF AVVA+KEG
Sbjct:   14 AVAVAAGALMPG-TLAFVA--SPNVIITGTQQRLPSRLGQ----------PA-TSRHE--SLSMSVS------PGAKLVLNDGERTKLNDGPDGLFYGYPRICYHVDEGFLKHLTELYRERIPAGGAVLDMMSSWVSHLPPEVTYERVDGHGMNLEELGRNPRLDTKRVWDLNAEPRLPFEDATYDAVVCTVSVQYLQQPEAVFADVCRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRARLVSDYFNAAGGFGPPEVVEREASDSAGFFEGFADMFGMVGKGDPFCAVVATKEG 289
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A835YM46_9STRA (Methyltransferase type 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM46_9STRA)

HSP 1 Score: 268 bits (684), Expect = 2.700e-80
Identity = 139/242 (57.44%), Postives = 175/242 (72.31%), Query Frame = 1 
Query:  292 MSSAASPSPAAKPVLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFEST------GS---FSKPEIVERKAQDSAGFFEGFA-DMFGMVGAGDPFYAVVASKE 987
            MS+A++ +P  +PVL++ +R K +   D+++YN PR+ +HVD+ F + LT+LYRERIPAGG VLD+MSSWVSHLP DV Y +VDGHG+N EEL RN +L   RV DLNADP+LPFD   YDAV+C VSVQYLQ PE +F DV RVLKPGGVAIFSFSNRMF +KAI  WI+R   GR+ LVS YF S       GS   F++PE++ + A   AG F  FA ++ G+   GDPF AVVA K+
Sbjct:    1 MSAASTGTPPVQPVLSESDRRKYDTAPDAYWYNTPRLVFHVDSSFTSKLTDLYRERIPAGGTVLDMMSSWVSHLPSDVRYAQVDGHGLNREELQRNPQLTDIRVQDLNADPYLPFDSEQYDAVVCAVSVQYLQQPERIFGDVYRVLKPGGVAIFSFSNRMFGNKAITAWIDRDDAGRAALVSSYFRSVQPVGEAGSPQGFTEPEVIMKDAS-IAGIFASFAREVVGLNVGGDPFIAVVAYKD 241
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: UPI0016862DFC (class I SAM-dependent methyltransferase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016862DFC)

HSP 1 Score: 237 bits (605), Expect = 2.750e-69
Identity = 116/217 (53.46%), Postives = 147/217 (67.74%), Query Frame = 1 
Query:  334 LNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASK 984
            L   +R KL+D  D+ FY+YPR   HVD GF+  LT+LYRER+     + D+MSSWVSHLP ++ +  V+GHG+N EEL +N RLD     +LN DP LP  DA +DAVL CVSVQYLQ+PEAVF ++ R+LKPGG+AI SFSNRMF  KAI  W + T   R +LV  YF S   FS+PE++ R++   A     F  M GM G GDPFYAV+AS+
Sbjct:    3 LRPNQRTKLDDTDDTLFYSYPRFVTHVDEGFIQQLTDLYRERLKPNTRIFDMMSSWVSHLPDEIKFAHVEGHGLNEEELAKNPRLDRYFAQNLNLDPKLPLLDAEFDAVLNCVSVQYLQYPEAVFSEIHRILKPGGIAIISFSNRMFYQKAIAMWRDGTEASRIELVKSYFNSVAGFSQPEVISRQSNAPA-----FMQMLGM-GGGDPFYAVIASR 213
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A2T1E9N7_9CYAN (SAM-dependent methyltransferase n=1 Tax=Stenomitos frigidus ULC18 TaxID=2107698 RepID=A0A2T1E9N7_9CYAN)

HSP 1 Score: 236 bits (601), Expect = 1.030e-68
Identity = 119/219 (54.34%), Postives = 151/219 (68.95%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASKE 987
            +L   +R KL+D  DSFFY  PR   HVD GF+  LT+LY+ER+     VLD+MSSWVSHLP  +A+  V+GHG+N EEL RN RLD   V +LN +P LP DD S+DAVL  VSVQY+Q+PEA+F ++ RVLKPGGVAI SFSNRMF  KAI+ W + +   R +LV  YF S   F+KPE+V R++Q       G   +FGM G GDPFYAV+A ++
Sbjct:    2 LLRPEQRAKLDDTNDSFFYGQPRFVTHVDEGFIQQLTDLYQERLQPDMRVLDLMSSWVSHLPEAIAFTHVEGHGLNGEELARNPRLDHYFVQNLNQEPTLPLDDQSFDAVLNTVSVQYMQYPEAIFSEIHRVLKPGGVAIISFSNRMFYQKAIQAWRDGSEGDRVRLVEGYFTSVPGFTKPEVVARQSQAP-----GIMQLFGM-GGGDPFYAVIAHRQ 214
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: Q3MBN7_TRIV2 (Methyltransf_11 domain-containing protein n=9 Tax=Nostocaceae TaxID=1162 RepID=Q3MBN7_TRIV2)

HSP 1 Score: 234 bits (598), Expect = 2.970e-68
Identity = 116/220 (52.73%), Postives = 149/220 (67.73%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASKEG 990
            +L   +R+KL+D  D+ FY YPR   HVD GF+  LT+LYRER+     +LD+MSSWVSHLP ++ +  V+GHG+N EELGRN +L+   V +LN +P LP  D  +DAVL CVSVQYLQ+PEAVF ++ R+LKPGGVAI SFSNRMF  KAI+ W + +  GR +LV +YF S   FS PEI+ RK+         F    G  G GDPFYA +A +EG
Sbjct:    2 LLKPDQRLKLDDTDDNLFYAYPRFVTHVDEGFIQQLTDLYRERLQPNTRILDMMSSWVSHLPEEIKFAHVEGHGLNAEELGRNPQLNHYFVQNLNENPGLPLPDQEFDAVLNCVSVQYLQYPEAVFSEIHRILKPGGVAIISFSNRMFYQKAIQAWRDASEPGRLELVKRYFASVPGFSTPEIIARKSTAP-----NFLQWLGAPG-GDPFYAAIAHREG 215
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A2T2RXK9_9CYAN (SAM-dependent methyltransferase n=1 Tax=Cyanobacteria bacterium QS_8_64_29 TaxID=1919134 RepID=A0A2T2RXK9_9CYAN)

HSP 1 Score: 234 bits (597), Expect = 3.870e-68
Identity = 115/218 (52.75%), Postives = 150/218 (68.81%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASK 984
            VL   +R K++   D+ FY+ PR+  H D GFL  LT+LYRER+P  G +LD+M SWVSHLP ++A+  V+GHGMN  EL RN RLD   + DLNA+P LP  DAS+DAVL   S+QYLQ+PEAVF +++RVL+PGG AI SFSNRMF  KAI  W + T   R +LV +YF +TG F++PE + R++Q  A        + G VG GDPFYAV+A +
Sbjct:    2 VLQPQQRQKIDTADDALFYSAPRLVTHADDGFLEQLTQLYRERLPPDGRILDLMGSWVSHLPEEMAFAHVEGHGMNEAELARNPRLDRYFIQDLNANPELPLADASFDAVLIAASIQYLQYPEAVFAEIRRVLQPGGAAIVSFSNRMFYQKAIAAWRDATDAERIELVKRYFRATGGFTEPEAIARQSQVPA-----VLQLLG-VGGGDPFYAVLAER 213
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: UPI001A0ED16A (Class I SAM-dependent methyltransferase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI001A0ED16A)

HSP 1 Score: 234 bits (596), Expect = 5.210e-68
Identity = 113/218 (51.83%), Postives = 149/218 (68.35%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASK 984
            +L   ER KL++  D+ FY+YPR   HVD GF+  LT LYR R+     +LD+MSSWVSHLPP++ +  V+ HGMN EEL RN RL+   V DLN +P LP  D  +DAVL CVSVQYLQ+P+AVF ++ R+LKPGG+AI SFSNRMF  KAI+ W + T   R +LV +YF++   FS+PE++ R +Q        F  M G +G GDPFYAV+A++
Sbjct:    2 LLRPAERTKLDETDDALFYSYPRFVTHVDEGFIEQLTNLYRARLKPNTRILDLMSSWVSHLPPELEFAHVEAHGMNSEELRRNPRLNHYFVQDLNKNPALPLPDCDFDAVLNCVSVQYLQYPDAVFHEIHRILKPGGIAIISFSNRMFYQKAIQAWRDGTEASRVELVKRYFQAVPGFSQPEVIARPSQIPT-----FLQMLG-IGGGDPFYAVIATR 213
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A6P1AH65_9CYAN (Class I SAM-dependent methyltransferase n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AH65_9CYAN)

HSP 1 Score: 234 bits (596), Expect = 5.940e-68
Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 1 
Query:  328 PVLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASKE 987
            P L   +R KL+D  D+ FY+ PR+  HVD  F++ LT LYRER+     + D+MSSWVSHLP ++ +  V+GHGMN EEL +N RLD   + DLN +P LP  DA +DAVL CVSVQYLQ+P+A+F ++QR+LKPGG+AI SFSNRMF +KAI  W   T  GR KLV  YF+S   FS+PEI+  ++         F  M G VG  DPFYA +A KE
Sbjct:    2 PRLRPEQRTKLDDTEDTLFYSVPRLVTHVDDNFIDQLTNLYRERLKPKTRIFDMMSSWVSHLPSEMEFAHVEGHGMNEEELAKNPRLDHYFIQDLNQNPQLPLADADFDAVLNCVSVQYLQYPDAIFSEIQRILKPGGIAIISFSNRMFFNKAIAAWRENTEAGRVKLVKSYFQSVPGFSEPEIIVNQSS-----IPSFLQMLG-VGGTDPFYAAIAQKE 215
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: A0A6P0ZEP4_9CYAN (Class I SAM-dependent methyltransferase n=2 Tax=unclassified Sphaerospermopsis TaxID=2646443 RepID=A0A6P0ZEP4_9CYAN)

HSP 1 Score: 233 bits (594), Expect = 1.080e-67
Identity = 115/218 (52.75%), Postives = 149/218 (68.35%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVVASK 984
            +L    R+KL+D  D  FY+YPR   HVD GF+  LT+LYR+R+     +LD+MSSWVSHLP ++ ++ V+GHG+N EEL RN RL+   V ++N  P LP  DAS+DAVL CVSVQY+Q+PEAVF ++ RVLKPGG+AIFSFSNRMF  KAI+ W + +   R KLV  YF S   FS PE+VE K+         F    G+ G GDPFYAV++S+
Sbjct:    2 LLRPDHRLKLDDTDDKLFYDYPRFVTHVDEGFIQQLTDLYRQRLQPNTRILDMMSSWVSHLPEEMEFDHVEGHGLNAEELARNPRLNHYFVQNINTQPQLPLADASFDAVLNCVSVQYIQYPEAVFAEIYRVLKPGGIAIFSFSNRMFYQKAIQIWRDASESSRVKLVKGYFASGSGFSTPEVVENKSAAP-----NFLQWLGLPG-GDPFYAVISSR 213
[Close]
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Match: UPI0016809FC9 (class I SAM-dependent methyltransferase n=1 Tax=Anabaena sp. FACHB-1237 TaxID=2692769 RepID=UPI0016809FC9)

HSP 1 Score: 233 bits (593), Expect = 1.450e-67
Identity = 111/215 (51.63%), Postives = 150/215 (69.77%), Query Frame = 1 
Query:  331 VLNDGERMKLNDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSHLPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAVLCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRTAKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDPFYAVV 975
            +L   ER+KL+D  D  FYNYPR   HVD GF++ LT LYR+R+ +   +LD+MSSWVSHLP ++ +  V+GHG+N EEL RNK+L+   V ++N DP LPF D ++DAV+ CVSVQY+Q+PEAVF ++ RVLKP G+AI SFSNRMF  KAI+ W + + K R +LV  YF S   FSKPE++ +++   +     F    G+ G GDPFYAV+
Sbjct:    2 ILRPNERLKLDDSDDQLFYNYPRFVTHVDPGFIHQLTSLYRQRLQSHTRILDLMSSWVSHLPTEMNFSHVEGHGLNAEELSRNKQLNHYFVQNINTDPKLPFPDQNFDAVINCVSVQYMQYPEAVFSEIHRVLKPNGIAIISFSNRMFYQKAIQVWRDSSEKRRVELVKSYFNSVPGFSKPEVIIQESTSPS-----FLQWLGIPG-GDPFYAVI 210
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYT8_9PHAE8.250e-12971.48Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A835YM46_9STRA2.700e-8057.44Methyltransferase type 11 n=1 Tax=Tribonema minus ... [more]
UPI0016862DFC2.750e-6953.46class I SAM-dependent methyltransferase n=1 Tax=Mi... [more]
A0A2T1E9N7_9CYAN1.030e-6854.34SAM-dependent methyltransferase n=1 Tax=Stenomitos... [more]
Q3MBN7_TRIV22.970e-6852.73Methyltransf_11 domain-containing protein n=9 Tax=... [more]
A0A2T2RXK9_9CYAN3.870e-6852.75SAM-dependent methyltransferase n=1 Tax=Cyanobacte... [more]
UPI001A0ED16A5.210e-6851.83Class I SAM-dependent methyltransferase n=1 Tax=Os... [more]
A0A6P1AH65_9CYAN5.940e-6852.27Class I SAM-dependent methyltransferase n=1 Tax=Ka... [more]
A0A6P0ZEP4_9CYAN1.080e-6752.75Class I SAM-dependent methyltransferase n=2 Tax=un... [more]
UPI0016809FC91.450e-6751.63class I SAM-dependent methyltransferase n=1 Tax=An... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:772287..784814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJL7
PFAMsMethyltransf_11
Model size2509
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons8
Evalue7.97e-135
EggNOG OGsCOG0500@1|root,KOG1269@2759|Eukaryota
Ec32 ortholog descriptionSAM-dependent methyltransferases
Ec32 orthologEc-17_002490.1
Descriptionsterol 24-C-methyltransferase activity
Cds size933
COG categoryQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.174.1prot_P-littoralis_Contig20.174.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 773803..784754 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789979.3057692-UTR-P-littoralis_Contig20:772286..7738021680789979.3057692-UTR-P-littoralis_Contig20:772286..773802Pylaiella littoralis U1_48UTRP-littoralis_Contig20 772287..773802 -
1680789979.4079487-UTR-P-littoralis_Contig20:784754..7848141680789979.4079487-UTR-P-littoralis_Contig20:784754..784814Pylaiella littoralis U1_48UTRP-littoralis_Contig20 784755..784814 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789979.3186562-CDS-P-littoralis_Contig20:773802..7738991680789979.3186562-CDS-P-littoralis_Contig20:773802..773899Pylaiella littoralis U1_48CDSP-littoralis_Contig20 773803..773899 -
1680789979.3295584-CDS-P-littoralis_Contig20:774486..7745991680789979.3295584-CDS-P-littoralis_Contig20:774486..774599Pylaiella littoralis U1_48CDSP-littoralis_Contig20 774487..774599 -
1680789979.338432-CDS-P-littoralis_Contig20:776305..7763571680789979.338432-CDS-P-littoralis_Contig20:776305..776357Pylaiella littoralis U1_48CDSP-littoralis_Contig20 776306..776357 -
1680789979.3532305-CDS-P-littoralis_Contig20:778749..7788801680789979.3532305-CDS-P-littoralis_Contig20:778749..778880Pylaiella littoralis U1_48CDSP-littoralis_Contig20 778750..778880 -
1680789979.363754-CDS-P-littoralis_Contig20:779879..7799571680789979.363754-CDS-P-littoralis_Contig20:779879..779957Pylaiella littoralis U1_48CDSP-littoralis_Contig20 779880..779957 -
1680789979.3775082-CDS-P-littoralis_Contig20:780539..7806091680789979.3775082-CDS-P-littoralis_Contig20:780539..780609Pylaiella littoralis U1_48CDSP-littoralis_Contig20 780540..780609 -
1680789979.389154-CDS-P-littoralis_Contig20:781563..7816961680789979.389154-CDS-P-littoralis_Contig20:781563..781696Pylaiella littoralis U1_48CDSP-littoralis_Contig20 781564..781696 -
1680789979.3981178-CDS-P-littoralis_Contig20:784495..7847541680789979.3981178-CDS-P-littoralis_Contig20:784495..784754Pylaiella littoralis U1_48CDSP-littoralis_Contig20 784496..784754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.174.1

>prot_P-littoralis_Contig20.174.1 ID=prot_P-littoralis_Contig20.174.1|Name=mRNA_P-littoralis_Contig20.174.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=311bp
MIAAASVTTISVALATAAGRLAPGGAFAFVAPPSPAAAAFGRTQRQHLKQ
LQLYHNKGISQHPASTTRHPPGSLNMMMSSAASPSPAAKPVLNDGERMKL
NDGADSFFYNYPRMCYHVDAGFLNHLTELYRERIPAGGAVLDIMSSWVSH
LPPDVAYERVDGHGMNFEELGRNKRLDTKRVWDLNADPHLPFDDASYDAV
LCCVSVQYLQHPEAVFKDVQRVLKPGGVAIFSFSNRMFSDKAIKGWINRT
AKGRSKLVSKYFESTGSFSKPEIVERKAQDSAGFFEGFADMFGMVGAGDP
FYAVVASKEG*
back to top

mRNA from alignment at P-littoralis_Contig20:772287..784814-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.174.1 ID=mRNA_P-littoralis_Contig20.174.1|Name=mRNA_P-littoralis_Contig20.174.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12528bp|location=Sequence derived from alignment at P-littoralis_Contig20:772287..784814- (Pylaiella littoralis U1_48)
CAGGACACAACAAATCAAATCGACAACGACCAACACCTTCCACCAGAGAC
ACTCACGACCATGATTGCTGCCGCGTCTGTCACGACGATATCAGTTGCTC
TCGCAACAGCAGCGGGGAGGCTAGCGCCTGGTGGAGCATTCGCGTTTGTG
GCACCGCCCTCCCCTGCTGCTGCTGCGTTCGGCCGGACTCAGCGCCAGCA
CCTGAAGCAGTTGCAGTTGTACCACAACAAAGGCATCAGTCAACATCCCG
CTTCAACGACAAGGCACCCCCCTGGGTCGTTGAACATGATGATGTCCTCG
GCTGCATCCCCTTCGCCAGGTGTGTGTGCTAAATTTTGGTGCACTGCTTT
AGCACCCAGGAGCAGACACATTGAACACATGTAGATGTCAACATGTCAAC
ATGTCAACATGTCAACTGCCGTGTTCTGACAGATCCGTGCGCTACATGGC
TCTCGCACTTTCCACCATGTATCATATATAAGAGAGAGGGCTTGCGCTTG
TCCGTTGGTGGCATCCCTCCTCCCCTCCGCTGAAGCGAATGAGACGCAGA
TGTTGCATGCGCAATGAATTATATCGCCCAGAATTCGTACCGTGCTGCTT
CACCGGGGGCGCCAGTGACGACATGCCAACAGGTTTTCACAGCTGTCTTC
TGTTTGGAAGCAGACACGCTCTTAGACATGCCTGCAGCATCCAAGCAGGT
TCCCACCCGGCCTACATAGCTTCACCTACAGGGACGGGCGCCCAACACTA
AAGTCTAACCCCAAACCTAACCCCAACCCTCAGGAGAGGTAGACAGCTTG
GTTGCTGTGCCCCGGAAAGGATCTACGTATATACTTCGAAGTGTATGGTA
GGTTGCTGTCGCCGTGAAAACGTTTCACTGTACCGGTCCATACCTGTGAA
ACCTGCCCAACGGTGTACAGAGTACTGAGCGCCGGTGTTTCCCACCATAT
GAGCGCGTGTGCAGCTATGGTAGCGCCCTTGAGCTCTGGAGCAGAAGTAG
TTTGATACATGGTAGTGGTGGTCTCTGTGATACCATGTTTGGAAGAAGCG
CCCTCCGCCGCCGCACTGTTATGTATGATGTAATGTGTAATATGACGTGA
TGGTACGGAAGCAGATTTTGGGTGGGGGCGGGGCTCGGGGAGAGTGTAAA
CCTTCCGTGGGATGTGACCCGGGCTTTACGGCGGTGGACGAAGGAGAAAC
AAAAAGGGGGTTAAAACCAGCCTGTCGTGTATGACATACGAAACAGTAGG
CAAGACAAGCGGAAGGTGTATCTTGTCTCCCGCAACGTGTGTGTTTGCGT
ACAGCAGCAGTGGTGCCTCTGTGTACTTCAAGAGCGTATCTCAAGAGGTC
TTGCTTGTCGTCCCGCACATGGCGCAGGCGGTAGTGTTACAAAAAAAAAC
AAGAATGCTGGTGGCGATCGCAACAGCAAAAGCCCTTTCGGCGCCCCCCC
TCCCACCCACCCATTCAGACTGTGTGTAGACAGAGTTTATGGAAGCCGGA
TGTTGACCTCAATCCTGACTTTTGTAGGGGATGACTACAGAGATGTAACT
TGTTTGGGGCAAATTCTTTCATAGCCTGTCAATCTTGTCACTTGATTGGA
GATCGAAAAGTTTTTGTTACTGGGAGGGGTCTTGGGGCCACGATCCCAAA
GAACGGCCTTGCGGAGGCTTGCCTCCAAATCTTGGTTTGAAGGGAGGGGT
CAGACGAACGATGCAATGGCCGATGACGTATCATGCGGGATAAATACCGA
ACACGAACATGGCGCACTCATCAAGGGCTCCGAGCAGCCTTAAAAATGCA
TTGCCTTGCCAACCTGGTGGCTGGCCGGTGGCGGCCACTCTTAAGGTGTT
GTTTTTTTGTTTTTTTTCCTACTGGCTTGGGAGCAGGAGATGTTCACAGC
TTGTTTTGACCCCTGCAGAGCAAAATAGACAGCCCTTCAACAGACACCTC
GTGGCACCACATGCAATTCCTCGCTCGATCGACCACGTACCTCAAGCTAT
TTATCTGGAAGGATGGGATTTCCACCCACCGCTTGAGCCGTCGGCAGGGC
TTTGGGTCGGCCGTGGGGTCATTTCAATTAACGGGGAGCAGCACCGGTCG
AGGGTATAAACTGCCAGTCTAGGCACAAAAGCTGTTTTTCTTTTTTTGGC
CTCTCGACGATAGACAACTTCGTCGATCCGCCTTGATAATAACCTGTAGA
ACAGATGTAGAAAAGATGTTTGATACACCGGGCTGATGCTCGTACCGGTT
GCCTGAACGACCCCGATGGCCAACCCAGCGCCCTGTCGACGGCAAGCGCA
GTGAATGAAGACCTCGTCCTCTCAAGTTTTAGCTTGATACATGGTCGACC
GAGCGAGAAACCCAACGCCCTGCCGACACCAAGCAGTGAATGGAGACCTC
ATCCTTCTAAGCTGTTGCTTGATACGTCGTCGATCGAGCGAGTAATTGAA
CATGTTGCCCTCGGGCGTGTCTTGTCTTGAGGGTCTGTTTTGCCTTGTGG
ACGTGAAGGCACGCTATTGACATCTCCCGCTTCAAGCCTGTGGCGGAAGC
TGTTTCGCACTCCTGAATAGCGACCGCCACCGGCCAGCGGCCTGGTTGGC
CGAGCAATGCACCTAGGCTTGCTCGGGGACCCTCGACAAGCTCGCCGCAT
TCGGTATTTCCTCCGTAGAGTAAGTGGTAGTTGCTTCACCAGAAAGCGCG
ATGAGATGGGCCACACACCCATATTTCGTTGCACGGAGATCAGGAATCCT
GTGCACCATGCGCACGGCGAAACAAAAATCTTGAAGGAAGAGAGCTAGGT
GTTCGGGTAGGGGGAGGTACAAAACAATCTAGATCATCAACACTGGCACA
CACCGGTCGAGCCGCTTTCGTGCGTGTTCATATCATACCATCCTTCACCT
GCATGCACATCATACGGGTGGCGTGAGTGAAACTGACTCGGTTTGGTCTG
CCCTCGTGTGTGTGTCTTGGTGCTGCGTTGTCCCCTGTTCGTTTTTCACA
ACCCGCGTGCTTTTTTATTTCGCCGCCTTTGTTTTGTGTTTTATGTTTTG
ATGGGATCGATGCGATCGATTGACACGTACGTATCATATCATGCGCGTTT
ATCATACTGCTGTAGCAGCAGCAAAGCCGGTCTTGAACGACGGAGAACGC
ATGAAGCTCAACGACGGGGCCGACTCCTTCTTCTACAACTACCCCCGCAT
GTGCTACCACGTTGACGCGGGTTTCCTCAACCACCTGACGGAGCTGTACA
GGTGGGGGTGGTCACTGCGCCAAGTTGCTTTGCATCACATCGTGGCATGG
CATGATGAGCAGAACAGCCGTAGATTGCGTTGGAATCCAGGGGTCCCCCT
GGATTGATCCAACTTCTAAACCTTGGTGATGAGTCGACGAAGACGGAAAG
AGTCGACGGAGAGGAAAATTGCCAAAACACCAAACGACAGCTCCGTTCTC
GAGTATCTCTGTATCTCTCCATCGGAACTTGATCTTGCGGCGCGCGCTCT
CTTCTGTCATTTTTTTGTTTTCTACTTGGGAGCGCTCTTGATGATGACAA
TGATGATAGGGTATTGAGTGCGAGAAACTTGCATGTCCTTGTTTTTTTTG
TTTTTTTTTCGTATCTTGTTGTGTGCATAGTGCGCGCTCTCCTGTTTTCT
CTTTTCTTTAATTTTTTTCCTTGTAAAGCGCTCTTGGTGTGTAGTAAATC
TCTCCGGCAGACATCTCATTCTTCATCAATAATGACTGACGCTTTTCACG
GCACAAAAACAAGCAAAGCACAACCCACACGAACCGATAAGCACTGTACA
CCTGGTTTGCTTTCTTGAGAAGATGAAATAAAATCACCCACCCGACTATT
TTCTACGGAAAGTGAACCTTTTTTGAACTGAAAAAAGAGGGTACTATGAT
ACGGCTGGCTGTCTGACTGGCCGGCTGGCTGCGAGGCTGCAGCTTGTGCA
GAGGTACGTGGACGTTTTCGTTGAGAAATATCCTTAGAAAGAAGAGCCGC
CATGCTCACATGCGGTGCATGGGTGTACAATCACACAACATGCCTCTTTA
TCTCTACGTATCTCGGTGTGTTTTCTTGTACACTCCAACCCATTTCCCTT
GCATACCGGTATGCCCCCCCCCCCTCCTCACCCCCCCCCCCGCTTCCTGT
CTCTCGCGCCCCTCGCCCGTGACCATGACAACTCAATCCGATTGGCACCC
GGAAGAGAACGGATTCCTGCGGGGGGCGCAGTCCTAGACATTATGTCTTC
GTGGGTCAGCCACCTGCCTCCGGATGTGAGTATCACGACACACAAGCACC
CAACTACTGGGCGTGTGTCGTCTGTCTGGTCTGGATCTTTCTTGGTGCTA
GTTGCAAGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTTTTG
TTGTTGTAGGTGTATGTATGTAATGTATGTATGTATCTATGTATCTATGT
ATCTATATACTTCAAGTATTAGGCATGCTGGTATGTTTGTTTGTATTTGT
CTGCATGTATTCATGTAGATATTTGGATGTTCATTTGTACGTATGCATCT
AAGCATCAAGCGGTGTGTACGAGTGCAAAACGTCAGCCTGCGTACATACA
AGTACACGAGGTGGTTCCTCTCGCAAGGGGTGAGGTTGCGTGTGCGCATG
CACGTGGCCTGGCTTCTCACGCCCCACACGACTTTCTGTGAGGCAGCGTC
ATGCCCCCCCCCCCCCCCGTCGCCATCCCAGGCTGTTGTTTTCTATTCGC
ACTGGGGGTGAAGACGCACACCTGGTACTTACTTTCATTTACACACCGAC
TTCCACGTGATTGGTGTGCATGGACACGTTTTTTTCTTGCACCTCGCGAG
CCCACAGGTTGCCTACGAGCGCGTTGACGGGCACGGCATGAACTTCGAGG
AGCTCGGCCGCAACAAGCGCCTGGACACCAAGCGAGTGAGTGGGCGGGGC
GCCTAACGCCGGAGATATACGTACCCGATTGAGTCCACTCCTCCAGCCGC
CTGTACTTTCCCGTCCGTCGTACCTGGTCTGATTCATTTTGATTTATTTT
TTGCGTTTGTCGTCGTCTGTCGTTGTTGTGCCGCTGTCGTTCTTCTCGTC
CTTTGTTTTTGTGCTGGTACACGCGTAATTTGTAATACTTCGTATATAAT
AATACGAAGTATATTATATACGAAGTATATGTATTTTTTCGCGCCGTTGA
CGTCGTGGTCTTAAATTTTTACGTTCACGATGCTTGGCTCTGTTCCCTGC
TGCTGCAATCTTTGGTGAAGGGCCTCGCCGGCTACCGTGCCGTCTGTTTT
TTGCTCTTCTCTGTTTCTTGTCTGCACTGCTCCGCGTGTCTTTGCAAGCA
GCTGCTCTGCTGGGTTTTTTTTTCACATGTTTTGGTACTACTGCCTTTTC
GGCGCACTCTGCTCTGGCTTGCTGGCTTGTCCTTGCTGCCTCTTTTTTTT
TTTTTTCATTTCTCGGTTTTTTATGTTATTTGTCGTTTGTAAACGGTACT
CCGCACTAGTTTTGGTTGGAGGTCTGCTTGTTTTTTTTTTTTCGCCGCTG
AATTCGTGGTCAGGCTCTTGGCTTATTCCCCGCTGCTTTTGCTGTCTGTC
TGCTCCGCTGGGCGCGGTGTTGTCTTTACACCGCACCGCCCTGCTTTCTA
CGCCGTATTGCCCCGCTTTGTACCGCCGTATTGCCTTGCTTCGTACCGCC
GTATCGCCCCGCTTTGTACCGCACTGTCCTGAGCTCTATACCGTTTCGCC
CTGCTCTGTACCGTGCGGCTCTTACCTTGTTGCGTACTGGCGCTGCTTTG
TTGCATTCCGCTCTGCACTTTTGTCACGAATCGCTCTTCTCCTCCCCCTT
GGCTCTCGCTTGTTCTGCTTAATATAAAACTGATTCACTCGGTTGTCTGC
GCTTTGAAACGTGTATATGCGTATCATATCTCAGGTGTGGGATCTGAACG
CAGACCCCCACCTTCCCTTCGACGACGCCTCCTACGACGCGGTTCTGTGC
TGCGTCTCCGTCCAGTACCTGCAGCACCCCGAGGCTGTCTTCAAGGACGT
GCAAAGAGTTCTCAAGTACGTCCCCCCCCCCCCCCTCAAGTATACACGTC
CCCCCCCCTCCCCTCAAGTATGCACGCCCCCTCCCCCCACCCTTTTTGAT
ATATTCCATGTTTTTGCATGTTGGTTCAGCATCAAAACACAGAAACAGGC
AGTCCAAAGGCTCTCTCACGCCTTCGACCCCAAATTCACTCCACGTAAAA
CTCCGAACGCAAGCATCTCCACTTGAGATCAAGCTCCAAGATATTCGTTT
TCCTGCTGACTCCCATAGACTGCGGAAGAGGGTGTATCATAGCATCATGC
TTGTCTACTTCAGACATCGGCTGTGACTCTAGGGACCAACGACTGTCTCT
CGACCAATCAGGGGCTTGCAAAAGTGTTCGAAGAGCCATGAACCGCGGGG
TATCCAACGCAATCACAAAAAACTATTGGTGTGGGATAGAGTCATGATCT
GCAAGGTGGCAAAGGCAACGTGGCGATTGGCGTCGTCGGTATCCCGCGAT
ATTTTTCTACGCTTTTTTTATTTTTTATCGCACCGCTGGTCGCACGCTTC
AAAACATCTCCGCAAATAAACTTGGCAAGAGGATTGATGCTGCTGCTGCT
GCTGCCGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCGAAGTCAAC
CTTTTTTTATCATATGTATGATGAAGTATCCGGCGTACGATTTATGTTTT
TTTTTGTGTGGGTGTTCTCGCTGGATGTCCGGACATGCGTGTAGCTATGT
CGGTCGACTAAGGACCTGACCAGGCAGAAATTTCCTTAAAATTTCGACAA
ACTGGCGCTGCAAAAGTCGCTGTTGCGTGGAACTTCAAGTCTGACTACTG
TCGTCGATCTCATACTGCCATTAAGTGTATTCAGGAATCATGAGACTTAT
CAACCTATTTTTTGGATTCAGTTAGACCCTGAAAACTCAGCACCCACACG
TATATGCTCGATCCTACCGGTTGCTACGAAGAATTGGAAGCACGGTGTGT
TGTCATTTTTCTGTTTGTTCGCGAGATATCCAGGGTCCCAGCAGATCCTG
TTGACCTCCTGTTCGACCCACATAACTCTTGGCACCATGGATGTCTGACC
AAAAATCAAACAAGAAAACAAACGTTGACTGCCCGATCTCCCAGTTTTTT
TGTAATACCCTATAATGGGTGCGTGTGCGAAATGAATCAAACCGGGGTCG
AAGGCGTGGATCAGCTCGTAGCGTGCCACCCCCTTCTTTTGTTATTTAGG
TCTTCCATTCGTTACCCGGTACGATATCAGCTGTATTGGTTCAAAGCGAC
CGCCCTCCCTCGTATTACATGGTTTGATAAAATAGATCGCGTGTATTCTG
CAGCAGGGCCTCTTTCCCTCCCCCCGCGACGAACCGTTCGTCACTGGCGT
AATTTGTTTTCGGGGAATGAAACCGTCAGGTGTATGGAGCATGCTATCGT
ATATATCGTGATGAAAAACGAGTGCCTGCTGTTGCAGCGTGTGGGGGAAC
CCTTTTGTATCATCCGTTACCAGGCAGTTGAGGTTGGGGGGCACCCTTCC
TCTCTAGCCGCGTGGCCTGCAAGTCACATGATTGTCGTGTGCACACGGAG
GGAAGTGTCCGTGTTCGTTGATATTATTTTCAATCTGTCGGGCGGATACG
TGCTGCTACACCACACAGGCTGAGTGCACGCAAAACTCGCGTAGGTATGC
CGCACATTTTTCCCGTCGGTCGCCGTGGCTACGATACGTCCTCGCAACGG
GAAACTGACAGCCCAAGCAGTGCTCCATTTTTTCTTTCCCTCGGATCACA
TGAGCCTTTTTTTGCCTTTTGATGTGTGATCATCAATCACTGATTCTCTC
AATACACGGATCCCCGAGACAAACGTTACGTTACTTTACAAATATGCTAG
GTATCGTGTTTATACGAAATACCCACCGTCTGCTGCGCACACCGTTTTCT
CGCCCGGATTCTCTGCACGTACGTTTTTTCTTCTTCTTTTTGCTCTGTGG
GACTCATCGCCCTCTCGCGCCTTTTCTCATATGCTGGGGTGAGATGTGCA
ATGGCGTATGTGTGATATGACACACTCTCACTTCGTACCGTACAGGCCAG
TACATGTATATTCACTACATGTACTTCAAAGCATACCATACGCTCTTTAT
TCTTCCCTGGGGTGAGGTGTGCATGATGTATGATACGTGACATACTCACT
GCTGCGTATCATAATGACCAGCACACACTTCGTATATATATATTTCACGT
GTACTAGTACATCTCACTGCATGTGCTTCAAAGTATACCCTGCTGTATTT
TTCCCTGTCCCCATTTTTCTCGTCTTGTTTTGGCATGGCCGGTGGCGCGT
GTGGCGTGCGTTTTATTCGTTGTGCCGGGGGCTTTGCCGTGTGCGGGGGG
AGAGAAGGCCTGGCGGCGTGGCCATTTTTTCGTTCTCGAATCGCATGTTC
TCCGACAAGGTGAGTCGTCGCGCCTGTCTGCGACAAGAAAATGACACTCT
CTACGTGAAAACTCGTTTGCGCGCGCGCGCGCGCGCGTGTGTGTGTGTGT
GTGTGCTTCGCCATCTCCTTTCCTTCCTTCTCTTTTTGACATTCGCTGTC
GGGTACTTTTGGTGCCCTCGCCGTAATCGTTACACACTCGCTGCTGCTGC
TGTTGCCGCTGCTGCTACTGTCGGGCCCTTTCCTTCTTCCTTCTTTTTGT
TGTTTCTTCTTGGTTGTTTCTTCTTGCTCTTCCGCTTTTTCTCTTGTTGG
CGTTCTTGTACTTCTTCTTTATTGTTTTTCTTTCGAATTGCTTTATTGTA
ACCGGTTTTATTCTGGGCTACGGGAGAGAGAGTGGACAGAGGTCCAGCAC
TAGGGTTCAGACCCCGCGTGCCTCTTCCTCTCGAACCTGTCTCTCTCTCT
CTCCAACCATACTACCAGCCGGGGAAGATTTCGACTACGCGGCACGCTGG
AGTCTGGAATGACCAAGTCCCCAAAAATGGTACACTACCATTCAACAACA
CCCCGTCATAGAAAACCTATTTCTACAGAAAGAAACGACTCCGCGCGTTT
TCGTTCCCCCCACCTTCGAAAGAAAAGGGGTGGGTGGGTGGGCGGGAAAA
AGACGCTGCTTCGTGGCCGCCTGCGTTGGCCGACCACTGCTATCCAACCT
TCTGTTCACGTACTCCGTAGCCCTCTTGGTGAGCACTCTCCGGCACTTCT
TGCTACGGTAGCTCTCTTCTGCACCCTTCTTCCGACAGAATGGTCCAGCA
GATGAGAAGCACGTCCTGAATAGAACCCTCGCGTGACCCTGTGTTTCCGG
AAATAACGCCAACTTACGATTCCACCGTTGCACAATAAACGACAGTTTTC
TCTTTCTTCGGTGAACAAACTTCCCTTTCTTCTTGTCTCCTTGCTGTTCC
TTTCGTCCTTCATCTCATTCCTCTCGTTTCTCCCGTTACTCTTCGTGCTA
TTATTATTTTTCTTGTTCTTGCTCTTCCACCTGTTGCTGCGGTTGCCAAC
GTTTTCTCCTGTCCGATGTACAAGCATCCCGCCTGTCTCACCATTCCTCC
GTTCATCGCGAAGAGAAAAAAACTGCTGCACTTGTAACCCTTGCCCGTTG
ATGGACGCTCGCGACGGACACCGCCTGTTTCGAGCGCAAACCTCTCCTCT
CGCTTGCTGGCGCGTTCAGATAGTGATGTTTCGTTTCATTCAGGAAATAA
TGTGAGATGCCATGGGGAACGAAGCGTTTGCTCCGCGCACAGCACTTATG
TCCTTGTTGATACGGTCGTTCTCCAGACATCAATCATATGGATCCGTTTT
TGTGTTTATTTTCACAAAAAACGTTCCTTTGCCATTCTCGACGACCGAGG
CCCACACCCGAGCCTGTGCCCGTTTTTGTTTTTTTACACTCCCCGAGTCT
GGGAACTTCCTTTCCCTTTCAGCCAAGTTTGATGAAAGCCCATCACCGAA
CTCCGCGTCGTTGTTCCATCCGCTACTGCTGTACCGCATCCTTCGCTGTG
TGTTCACATGTGTTCGCCTCTTGCGCTGTCTGTCTGTCTGTCTGTCTGTC
TGTCTGTCTGTCGGCCTTTCTGACCGACTTCACTACTGCCTGTTCTATAT
TCGTTCTTATCATATCTGTATCGCCGCTGTATGTATGTTTGCTCGGTGTA
AAAACAAAAAAATAGGCCATCAAGGGTTGGATAAACCGGACAGCGAAGGG
CCGGTCGAAGCTAGTGTCCAAGTACTTCGAGTCCACCGGGAGTTTCTCCA
AGCCGGAGATCGTAGAGCGGAAAGCTCAGTGAGTTTTTTTTTTTTTCTTA
TTTGCACTCTGTTTGTTTCTTCCAGAACAAGAACAACAAGAGCAATGAGC
AATGATTTTTGTTATGTTTCATCCCGTGCGTGTACTGCTTGCTGCGTATT
TCAGGTGACAAAAGAGATTGTTTGATGAGATGACAATTGGGTTTTTGATG
CAGAAGCTGCTGCGGCAGCGTTGGGTTCTGTTCGTTTGTCCGTCTCTCTA
ACGGGAACATGATGAGACAACAGAAAGATCAAAAGATCGAGCGAGATTTG
GTGCGGAAATTTTGTTTTGATTTTTTGGCGGGAAGAAAAAAACAATTTTA
CCAATTTGTATGTTCACCCCGTACAACATCAGGCACGGACGACTCGATAC
CATTTTATCGTGCCTATTTGGGTCACACACCTGTTTTGATCCACACACGT
ACTTCGTATCATACAACAGTGTCTGTCAATACGAAGTAAGAGACACACAC
ACACGACTCATAAAACAGCACACGAAACACACGAGAACACAAACGCGTTT
TTTTTTTTTTTCCGGCCCCATCCCCACGACTTTTATTTTTGTTTTGTGTA
ATTCGTGTTTTCCAGGGACAGCGCCGGATTCTTCGAGGGGTTTGCAGATA
TGTTCGGCATGGTCGGGGCGGGGGACCCGTTTTATGCCGTCGTCGCATCC
AAGGAAGGCTGATCAACAATATTAACAATTAAATGTAAAGAATAAACTGA
GAGAGAAAGGTGTTCATACTGGTTCCTCTAGGGAGAGAGGGGGGGGAGAG
GGAGAGAGAGAGAGAAGCATCTTCGGCATGTGCACGCATTCAAACCGTAC
AAGTAGCAGGAGGGTTGACATCATCTCCAAACCGGTGTTTTTTGCTTGAC
AGCCCGGTGAGTGGAAGCGGTGTGGCAATTTGTCAGAGAACTGCTCCTGT
CGTTGAAGCCAGGAAGGGGCATCGTATGTTGGTCTTAAGGGGGTATGTTG
GTCTTGATCATTTGCAGTACCGCCTGATACCCCAGTACATAGTTGGCGAT
GTGTTTTTCTTTCCTTTTTTGAACGTGAGAGGGTGGTACATGTATATCGC
ACTTCAGCATCTGCGAAGAGGGGCACGCCTTTTTTGTATATTGTGTCGAA
TGTCGAGGTTTTCCGCTGTTGTTGCGTGTGAAACACGCCGTGCGTTGAAG
AACAACTGGAGTTGCAGCATGTACGTACCGGTAGCCGATAAAGGTTCAGG
GGAGAAGGGGAACGCGACTGGAGACGGCGTGATCACTCGCACCGTACAGG
GGGAAAAGGTTTGGGAGGGGGGGGGGGCAGAGGAGCGGAGAACGCAGCCG
GTTCGGAATTGGAACCGCATGCGTCCGAGGGAGATAGACACGGCATGCAG
AAAGAGAGAGAGGGGGGGGGAAGACAGAGATATAAATAGACGGCAGGGGT
GGAGGAAAAACGTTTCAGAACCTTGAGGCCATTTAAGTGCCCCCACTGAG
ATGGGATAAAAGCGTGGGTCAACCTACACACTGAGAGAGAGACAGAGATG
AAGAGATTGCACGCAGCTCCCTGACTGGTCAATACCCCCTAGGGCGAAGT
TTTAAATCGATCGATCCGACGGAAGTTCCTCGAGTGCTAAGTGTGTCCAG
AGGTTGGATATCTATCGCAATATTGGCGGCCCACGATGTTGATCCCAGCA
GTATCGGCTGCGACCTTATTTTCCCTTCACTCGCTTCGTTGTGGAGGACA
GCAAAAGTAATCGAGCTCTAATAACCCCCGCACATGGGTTCCGTATATCG
TAGTAGAGGGTGGTACTGGCGGGGCATGATTTGCTCCAAGGAAGGGAACC
GCCGCGAGCACCTGGCAGCCGCCGTACAAAGTAGCTTTCGCGAGCTCTGG
CGTTCAAGATGTTCTCGCATCTTCTTCGCCGGTCTATCGTTGTCAAAATA
GAGACGGGTGGCACTCATGATGAGAGATCAGCATGGTGTTGGCTGATAAC
TACAGCAGAGCAGCAGTAGCCACGGCAACATGTGAGAGCTGTACAAAAAA
CAAACAAAATGTTGAGAGAGCCATACTCGGGGTAGAAAATACTTGTCAGA
TTTTTGCTCTTTTTTTTTCGTTCTTGGGGGTTGAGAGACCCAGGCTACAT
ACCCTTGGCAGACGTCGCCGATGAGGGTCCCAACGGAATGGTCGTGGGCT
CGCCTGTCAGCCACAGCCGCCATGTACA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig20:772287..784814-

>mRNA_P-littoralis_Contig20.174.1 ID=mRNA_P-littoralis_Contig20.174.1|Name=mRNA_P-littoralis_Contig20.174.1|organism=Pylaiella littoralis U1_48|type=CDS|length=933bp|location=Sequence derived from alignment at P-littoralis_Contig20:772287..784814- (Pylaiella littoralis U1_48)
ATGATTGCTGCCGCGTCTGTCACGACGATATCAGTTGCTCTCGCAACAGC
AGCGGGGAGGCTAGCGCCTGGTGGAGCATTCGCGTTTGTGGCACCGCCCT
CCCCTGCTGCTGCTGCGTTCGGCCGGACTCAGCGCCAGCACCTGAAGCAG
TTGCAGTTGTACCACAACAAAGGCATCAGTCAACATCCCGCTTCAACGAC
AAGGCACCCCCCTGGGTCGTTGAACATGATGATGTCCTCGGCTGCATCCC
CTTCGCCAGCAGCAAAGCCGGTCTTGAACGACGGAGAACGCATGAAGCTC
AACGACGGGGCCGACTCCTTCTTCTACAACTACCCCCGCATGTGCTACCA
CGTTGACGCGGGTTTCCTCAACCACCTGACGGAGCTGTACAGAGAACGGA
TTCCTGCGGGGGGCGCAGTCCTAGACATTATGTCTTCGTGGGTCAGCCAC
CTGCCTCCGGATGTTGCCTACGAGCGCGTTGACGGGCACGGCATGAACTT
CGAGGAGCTCGGCCGCAACAAGCGCCTGGACACCAAGCGAGTGTGGGATC
TGAACGCAGACCCCCACCTTCCCTTCGACGACGCCTCCTACGACGCGGTT
CTGTGCTGCGTCTCCGTCCAGTACCTGCAGCACCCCGAGGCTGTCTTCAA
GGACGTGCAAAGAGTTCTCAAGCCTGGCGGCGTGGCCATTTTTTCGTTCT
CGAATCGCATGTTCTCCGACAAGGCCATCAAGGGTTGGATAAACCGGACA
GCGAAGGGCCGGTCGAAGCTAGTGTCCAAGTACTTCGAGTCCACCGGGAG
TTTCTCCAAGCCGGAGATCGTAGAGCGGAAAGCTCAGGACAGCGCCGGAT
TCTTCGAGGGGTTTGCAGATATGTTCGGCATGGTCGGGGCGGGGGACCCG
TTTTATGCCGTCGTCGCATCCAAGGAAGGCTGA
back to top