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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 892 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 891 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789972.51485-CDS-P-littoralis_Contig20:85611..86502 | 1680789972.51485-CDS-P-littoralis_Contig20:85611..86502 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 85612..86502 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.17.1 >prot_P-littoralis_Contig20.17.1 ID=prot_P-littoralis_Contig20.17.1|Name=mRNA_P-littoralis_Contig20.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
SPVAPISPPTAPPILESTAPVDPPVSSPGPVAITPAPVEPPPTSTPIAPV
EPPTSPTPTPSAETPEPTTAETNPPFDPPVISLQPVEFTAEPTPPVAVEQ
PPTLAPIEAVVPTPATPEPTTPEPVDAPPTPAPNEAIVPTPATPEPTTPE
PVESPPTPAPIDEVAPTPATPEPTTPEPVDSPPTLAPVDQVAPTPSTPEP
TSPEPVVPPPTPAPIDAAVPTPATPEPTTPEPADSPPTPAPVDQVAPTPA
TPEPTTPLPVEPPPTPAPIEAVVPTPATPEPTTPEPADSPPTPAPVD back to topmRNA from alignment at P-littoralis_Contig20:85612..86502- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig20.17.1 ID=mRNA_P-littoralis_Contig20.17.1|Name=mRNA_P-littoralis_Contig20.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig20:85612..86502- (Pylaiella littoralis U1_48)
TCACCTGTCGCTCCCATATCTCCCCCAACAGCTCCCCCAATCCTTGAATC
CACCGCACCTGTAGACCCGCCTGTCAGTTCTCCCGGACCCGTGGCGATAA
CACCAGCGCCCGTTGAACCGCCACCAACTTCTACACCGATTGCACCCGTG
GAGCCCCCAACTTCGCCTACCCCAACGCCCTCCGCTGAGACGCCCGAGCC
CACGACAGCAGAAACTAACCCACCCTTTGACCCACCGGTCATTTCCCTCC
AACCCGTCGAATTTACGGCCGAACCCACACCTCCAGTAGCCGTTGAGCAG
CCGCCCACTCTCGCACCGATCGAAGCAGTAGTCCCAACTCCGGCTACACC
AGAACCCACGACGCCAGAGCCAGTTGACGCGCCACCCACTCCTGCGCCGA
ACGAAGCAATAGTCCCTACTCCGGCTACACCTGAACCCACAACGCCAGAG
CCCGTTGAATCACCGCCCACTCCTGCACCGATTGATGAAGTAGCCCCAAC
TCCGGCTACGCCAGAACCCACAACGCCAGAGCCCGTTGACTCGCCTCCGA
CTCTTGCACCGGTTGATCAGGTAGCCCCAACTCCGTCTACGCCAGAACCC
ACTTCGCCAGAGCCCGTTGTGCCACCGCCGACTCCTGCACCGATTGATGC
AGCAGTCCCAACCCCGGCTACACCCGAACCCACAACCCCAGAGCCAGCTG
ACTCGCCTCCGACTCCTGCACCGGTTGATCAGGTAGCCCCAACTCCGGCT
ACACCTGAGCCCACAACACCATTGCCCGTCGAGCCACCGCCGACTCCTGC
TCCGATCGAAGCAGTAGTCCCAACTCCGGCTACACCAGAACCCACAACGC
CAGAGCCAGCTGACTCGCCTCCGACTCCTGCACCGGTTGAT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig20:85612..86502- >mRNA_P-littoralis_Contig20.17.1 ID=mRNA_P-littoralis_Contig20.17.1|Name=mRNA_P-littoralis_Contig20.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=891bp|location=Sequence derived from alignment at P-littoralis_Contig20:85612..86502- (Pylaiella littoralis U1_48)
TCACCTGTCGCTCCCATATCTCCCCCAACAGCTCCCCCAATCCTTGAATC
CACCGCACCTGTAGACCCGCCTGTCAGTTCTCCCGGACCCGTGGCGATAA
CACCAGCGCCCGTTGAACCGCCACCAACTTCTACACCGATTGCACCCGTG
GAGCCCCCAACTTCGCCTACCCCAACGCCCTCCGCTGAGACGCCCGAGCC
CACGACAGCAGAAACTAACCCACCCTTTGACCCACCGGTCATTTCCCTCC
AACCCGTCGAATTTACGGCCGAACCCACACCTCCAGTAGCCGTTGAGCAG
CCGCCCACTCTCGCACCGATCGAAGCAGTAGTCCCAACTCCGGCTACACC
AGAACCCACGACGCCAGAGCCAGTTGACGCGCCACCCACTCCTGCGCCGA
ACGAAGCAATAGTCCCTACTCCGGCTACACCTGAACCCACAACGCCAGAG
CCCGTTGAATCACCGCCCACTCCTGCACCGATTGATGAAGTAGCCCCAAC
TCCGGCTACGCCAGAACCCACAACGCCAGAGCCCGTTGACTCGCCTCCGA
CTCTTGCACCGGTTGATCAGGTAGCCCCAACTCCGTCTACGCCAGAACCC
ACTTCGCCAGAGCCCGTTGTGCCACCGCCGACTCCTGCACCGATTGATGC
AGCAGTCCCAACCCCGGCTACACCCGAACCCACAACCCCAGAGCCAGCTG
ACTCGCCTCCGACTCCTGCACCGGTTGATCAGGTAGCCCCAACTCCGGCT
ACACCTGAGCCCACAACACCATTGCCCGTCGAGCCACCGCCGACTCCTGC
TCCGATCGAAGCAGTAGTCCCAACTCCGGCTACACCAGAACCCACAACGC
CAGAGCCAGCTGACTCGCCTCCGACTCCTGCACCGGTTGAT back to top
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