mRNA_P-littoralis_Contig20.155.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE) HSP 1 Score: 233 bits (593), Expect = 2.180e-65 Identity = 116/243 (47.74%), Postives = 148/243 (60.91%), Query Frame = 3
Query: 117 MPRLQPLALAYFVL-ATLTSAAGVRGIGDDVVAPDQPESRELDLVSGVKSIDLGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQRAPPRPDYLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVFAM 842
MPR Q LAL L A +AAG+R GD VAP + L G+ + DLGC+R+ + DRV Q +MTP+ CA++CL G + FY +Q G+ECWCGRAGT D+ GAL C PC G+A CGG SF+AF+ YLGCFVD + RLF P+ +N ETC+A C GFAYYGLQ EC+CG A E++ +LG + C +RC+GD +TCGGFNAM+VFAM
Sbjct: 1 MPRAQQLALVTGALWAATANAAGIRVHGDVSVAPPAARRLQSTLPDGLVTTDLGCYRDSQSDRVLQSGLMG-QSDMTPDVCAAYCLDKGSYTFYGVQYGQECWCGRAGTEYDRLGALEMSECDYPCTGDASSTCGGFDSFQAFELGALDQPEGYLGCFVDSQSSRLFSAPL-VASASNTAETCKATCA-GFAYYGLQYSEECFCGLAEEDYTRLGTSDACGYRCSGDVLSTCGGFNAMDVFAM 240
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 207 bits (526), Expect = 1.090e-54 Identity = 109/247 (44.13%), Postives = 150/247 (60.73%), Query Frame = 3
Query: 117 MPRLQPLALAYFVLATLTSAAGVRGIGDDVVAPDQPESRELDLVSGVKSIDLGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKF--QRAP---PRPDYLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVFAM 842
MPR Q L LA L +AAG+R GD + + L GV + DLGC R+ R DRV ++ + Q ++TP+TCA HC G ++FY LQ G+ECWCG AGT+ D+ G+L C+ PC G+A CGG L+F+AF+ Q P P YLGC+ D++ R+F TL NN E+C+A+C G+AYYGLQ G +C+CG A E++ G + +C CTGD ++TCGG AM+V+AM
Sbjct: 1 MPRTQQLILATGALWATANAAGIRTHGDVPLTTSATRRLQTSLPDGVVTSDLGCCRDGRSDRVLEQELMD-QTDLTPDTCALHCYSEG-YQFYGLQYGQECWCGVAGTDYDRLGSLDMSECAYPCTGDASSTCGGYLAFQAFELGSQNQPTTAPPTGYLGCYADDR-SRIFSALHVTLTDNN-AESCKASC-VGYAYYGLQYGEQCFCGTADEDYTVYGESDNCVLSCTGDASSTCGGSWAMDVYAM 242
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI) HSP 1 Score: 191 bits (486), Expect = 1.990e-49 Identity = 87/171 (50.88%), Postives = 109/171 (63.74%), Query Frame = 3
Query: 330 QINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQRAPPRPDYLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVFAM 842
Q +MTP+ CA++CL G + FY +Q G+ECWCG +GT D+ GAL C PC G+A CGG SF AF+ YLGCFVD + RLF P +N ETC+A C GFAYYGLQ EC+CG A E++ +LG + C +RCTGD +TCGGFNAM+VFAM
Sbjct: 3 QSDMTPDVCAAYCLDEGTYTFYGVQYGQECWCGTSGTEYDRLGALEMSECDYPCTGDASLSCGGFDSFHAFELGALDKPEGYLGCFVDSQSSRLFSNPF-VASASNTAETCKATCA-GFAYYGLQYSEECFCGLADEDYTRLGTSDACGYRCTGDVLSTCGGFNAMDVFAM 171
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 148 bits (374), Expect = 8.720e-35 Identity = 81/191 (42.41%), Postives = 102/191 (53.40%), Query Frame = 3
Query: 273 GCFRNKRRDR---VFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQRAPPRPDYLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVF 836
GC+R+ + DR + P R+ MTP C +C G FYA+Q GRECWCG T+ K GAL C+ PC G+ CGG SF F A +LGC+ DE+ DRLF L N E CRAAC G +GLQ G ECWCG E++ K G + C + C G+ TCGGF+AM +F
Sbjct: 750 GCYRDAKDDRRLAMGPMSSRD----MTPTLCNEYCAGQYA-SFYAVQYGRECWCGDDSTDYAKLGALDMTECAYPCTGDGDLTCGGFDSFEIFSLP-AETSQGHLGCYADEQDDRLFRADKIRLDENG-VEACRAACS-GSPLFGLQYGRECWCGTEDEDYTKHGASTDCDYPCRGNEDYTCGGFDAMNIF 932
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 116 bits (290), Expect = 6.120e-24 Identity = 69/201 (34.33%), Postives = 100/201 (49.75%), Query Frame = 3
Query: 270 LGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLG-EFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQR---APPRPDY-LGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGP-GFAYYGLQSGNECWCGKAH------EEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVF 836
+GCF + + DRV K +MTPE CA++C +YA Q GRECWC R ++D + + C C G++ CGG +F FK + +PP DY LGCF D+K DR+ E K + ETC C ++ LQ G ECWCG + +D+ G + CTGD + CGG+++ ++
Sbjct: 183 VGCFADDKEDRVLGSKMSSG--SMTPEVCAAYCADDSPSHTYYATQWGRECWCAR---DVD-YSRHGEGSCDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLED--KISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLY 375
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: A0A1B9IS65_9TREE (Uncharacterized protein n=2 Tax=Kwoniella mangrovensis TaxID=463800 RepID=A0A1B9IS65_9TREE) HSP 1 Score: 105 bits (261), Expect = 2.530e-20 Identity = 62/205 (30.24%), Postives = 84/205 (40.98%), Query Frame = 3
Query: 270 LGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQRAP------PRPDYL--------GCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVFAM 842
+GC + R P N T E C + C G + F L+ G+ECWC +N P CS C G+ CGG ++ AP P PD L GC VD++ DR T N R G+AY G++ G ECWCG A+ + + C CTGD CGG + + V+A+
Sbjct: 336 VGCMIDTDNPRALPGVSTTDANNNTIENCVAKCNDQG-YVFAGLEYGKECWC----SNTANLNPAPATDCSMTCSGDIYSTCGGSYRINVYRSADAPATGQATPLPDNLIPDGWSSVGCIVDDQSDRALNGGAFTSTNNTVQNCVRNCASRGYAYAGVEYGQECWCGDANSRL--VSASSGCDVACTGDKLYVCGGSDRLNVYAL 533
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: A0A420YL54_9PEZI (Uncharacterized protein n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420YL54_9PEZI) HSP 1 Score: 98.2 bits (243), Expect = 4.640e-18 Identity = 70/256 (27.34%), Postives = 97/256 (37.89%), Query Frame = 3
Query: 126 LQPLALAYFVLATLTSAAGVRGIGDDVVAPDQPESRELDLVSGVKSIDLGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQ----RAPPRPD---------YLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVFAMHCAS 854
+ P + V + S G + QP S D V LGC+ R NMT ETC + C G F++ ++ GREC+CG N A C C GN E CGG F+ +AP P YLGC+ + R + +N + C A CG + Y+G++ G EC+CG + C+ CTGD CG + + VF AS
Sbjct: 334 ITPTGYGHTVTSADISCPGGNVASCNATKTSQPVSWTGDAVYSP----LGCYTEATSGRALTGNSYTAD-NMTAETCETFCSKDG-FKYMGVEYGRECYCGHT-LNTGSV-ATNSSDCDKVCGGNQWEICGGGSRLNMFQMNSTIYKAPAVPTVYAGDATFGYLGCYTEATSGRALSGKSYSDNKNMTAQACEAYCGSTYTYFGVEYGQECYCGNQLNAGSVVAKESDCSKLCTGDTLQYCGAGSRLNVFKRKGAS 581
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: A0A6H0XPM1_9PEZI (Uncharacterized protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XPM1_9PEZI) HSP 1 Score: 95.1 bits (235), Expect = 3.160e-17 Identity = 59/193 (30.57%), Postives = 84/193 (43.52%), Query Frame = 3
Query: 270 LGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFKFQRAPPRPDYLGCFVDEKCDRLFETPVKTLGRNNDPETCRAAC-GPGFAYYGLQSGNECWCGKAHEEFDKLGP--TKHCAHRCTGDYTATCGGFNAMEVFA 839
LGC+ + + E MT E C S C G F ++ G EC+C A N A D C+ C GNA E CGG + + LGC+ D+ R T+ + E C+A+C G+AY GL+ GNEC+CG + L + C+ C G+ T CGG + ++A
Sbjct: 268 LGCYTDNNPKHALMNYFAEPSSGMTVEWCISQCSSSG-FSIAGVEYGGECFCDNAIKNNQGLAADGDAGCNMACHGNAGETCGGSDRLSLYATGAGWTK---LGCYSDQTYKRTLAY-TGTISGDVTIEKCQASCQAGGYAYAGLEYGNECFCGSSFNNGGDLATDGSVGCSFACAGNSTQICGGNQRLSMYA 455
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: B2ATP3_PODAN (Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 4 n=2 Tax=Podospora TaxID=5144 RepID=B2ATP3_PODAN) HSP 1 Score: 94.7 bits (234), Expect = 3.600e-17 Identity = 66/202 (32.67%), Postives = 91/202 (45.05%), Query Frame = 3
Query: 252 GVKSIDLGCFRNKRRDRVFPRKYREIQINMTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGG----KLSFRAFKFQRAPPR--PDYLGCFVDEKCDRLFETPVKTLGRNN-DPETCRAACGPGFAYYGLQSGNECWCGKAHEEFDKLGPTKHCAHRCTGDYTATCGGFNAMEVF 836
G S GCF + + MT E+CAS C +++AL+ GREC+CG + T + D +CS C GN + CG L RAP YLGCFVDE L P LG ++ E C A C ++Y+GL+ G ECWCG + + L C+ C+GD + CG + V+
Sbjct: 35 GTSSTRNGCFVSNVNGQRLLSASTYASDAMTVESCASFCF---RHKYFALEFGRECYCGNSYTAQP----VSDTQCSMQCAGNPAQNCGAGNRVDLYTNGLYVPRAPATLSTPYLGCFVDEGPRVL---PNNLLGASDMTAEKCAAHCS-NYSYFGLEYGRECWCGNSKPKNPAL--EIDCSFPCSGDDSQLCGAGGRINVW 223
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Match: UPI001D7B4608 (WSC domain-containing protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D7B4608) HSP 1 Score: 88.2 bits (217), Expect = 2.580e-16 Identity = 57/184 (30.98%), Postives = 81/184 (44.02%), Query Frame = 3
Query: 339 MTPETCASHCLGLGEFEFYALQGGRECWCGRAGTNIDKFGALPDERCSDPCPGNAKEECGGKLSFRAFK---FQRAPPRPD-----YLGCFVDEKCDRLFETPVKTLGRNNDPETCRAACG-PGFAYYGLQSGNECWCGKAHEEFDKL----GPTKHCAHRCTGDYTATCGGFNAMEVFAMHCA 851
MT +TC ++C G + L+ GRECWCG A + + A CS PC G+ + CGG +K + A P Y GC+ + K + + D C CG GFA+ GL+ G ECWC + + L G C +C G+ TCGG N + V+ + A
Sbjct: 1 MTIDTCLAYCSTKG-YHTAGLEYGRECWCGNALASGAQLDAGIRGNCSTPCAGDESQTCGGASLLSVYKNDTVRAASWVPGVGGYVYAGCYDEGKGRAVGDFRAADAAMTVD--ACVGICGGKGFAWAGLEYGQECWCARGLNKNAPLLSSPGQADQCTMQCAGNKGQTCGGSNKVSVYRSNGA 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.155.1 >prot_P-littoralis_Contig20.155.1 ID=prot_P-littoralis_Contig20.155.1|Name=mRNA_P-littoralis_Contig20.155.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp MPRLQPLALAYFVLATLTSAAGVRGIGDDVVAPDQPESRELDLVSGVKSIback to top mRNA from alignment at P-littoralis_Contig20:664283..670598- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig20.155.1 ID=mRNA_P-littoralis_Contig20.155.1|Name=mRNA_P-littoralis_Contig20.155.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6316bp|location=Sequence derived from alignment at P-littoralis_Contig20:664283..670598- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig20:664283..670598- >mRNA_P-littoralis_Contig20.155.1 ID=mRNA_P-littoralis_Contig20.155.1|Name=mRNA_P-littoralis_Contig20.155.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig20:664283..670598- (Pylaiella littoralis U1_48)back to top |