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Homology
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 8.060e-141 Identity = 258/442 (58.37%), Postives = 309/442 (69.91%), Query Frame = 1
Query: 511 GLGQLPQGGMRDFRRGGGGR-----RGNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLVTGVTLARGSRGPSYTYSSGTSSGPPSGRDSGNGRRATVTRRSGAEPQHEQPEPSSLYDVASDPDAEEAALQEALRRSLLDDSGSGG------RDSERVSTSVRNSRGS--AGEAAAAAENLGPAPPLPTAXXXXXXQQGHMSSDAQSGMTSSADAAAAVNQNEMRRRRLQRLGGG 1797
GLG+LP+GGMRD+ GG + +ALILA++L+HQISQL+ KPPLTLALMAGMSALHLKPD+F+ L G+F+W WL GGFD +R+VCL PAS+ DT+ERTG +EIRRLL+SPFVH D HLYYNMASFLLKGV+LELTMGT AFAGLL++SLLASQ +M+L+AWVLLVVFDV SPMH C VGFSGVLFAL YVLSRR PG +V+GF V+TRYATWLELVLI MVPNASFLGHLCGILAG+LYVEVP ++ +++L TG++L RG SYTY+SGTS GR S G R ++S P P + YD+ SDP+AEEAALQEALRRSLLD + GG RD+ + SR +A AA E LGPAP TA G+ + +E+RRRRL+RLG G
Sbjct: 7 GLGRLPRGGMRDY--GGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGR-KGVFEWSWLTGGFDHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTS-----GRASPEGARRETRQQS--------PNPPAAYDIDSDPEAEEAALQEALRRSLLDSTRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAP---TAPPPEENAGGY------------GAGGGEIAPDELRRRRLRRLGAG 417
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA) HSP 1 Score: 164 bits (415), Expect = 5.440e-41 Identity = 96/240 (40.00%), Postives = 134/240 (55.83%), Query Frame = 1
Query: 592 LILAMKLIHQISQLRRKPPLTLALMAGMSALHLK----PDLFEGL-LAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLV 1296
L L + L+ QI QL RKPP+TL LMA M LH + P+LF L + +W W +RL+ S +H D HLY+NM SFL KG LE +G+ F + Y L+ +++V+ A +L F + +P+H C+VGFSGVLFAL +L+ P +V GFQV T+YA WLELV+I+F+VP +SF+GH+CGILAG ++V P + S + V
Sbjct: 24 LALMLMLVRQIQQLERKPPVTLGLMALMYGLHFQKNQTPELFAPFSLCPDRVLSNWDW------------------------------KRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSPAMQSAMTSV 233
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A329RKV0_9STRA (Rhomboid domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKV0_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.330e-40 Identity = 97/238 (40.76%), Postives = 133/238 (55.88%), Query Frame = 1
Query: 574 GNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLL 1287
G N + L + L+ QI QL RKPP+TL LMA M LH + L A S+C P + ++ T R+++S +H D HLY+NM SFL KG LE G+ F + Y LL +++V+ A VL F + P+H C+VGFSGVLFAL +L+ P +V GF+V T+YA WLELV+I+F+VP +SF GH+CGILAG ++V P I S +
Sbjct: 17 GRNGQGIALMLMLLRQIQQLERKPPVTLGLMALMYGLHFQKQQTPELFAP-----------------YSLC--PDRVISHWDLT------RIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKAGSVRFLLTVGYLLLLCHVLVVVVALVLATGFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFTGHMCGILAGYIFVYSPAIQSAM 229
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A2P4XD54_9STRA (Serine protease family S54 n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD54_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.400e-40 Identity = 106/276 (38.41%), Postives = 150/276 (54.35%), Query Frame = 1
Query: 574 GNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLK----PDLFEGL-LAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLVTGV-TLARGSR---GP-SYTYSSGTSSGPP 1371
G + + L + L+ Q+ QL RKPP+TL LMA M LH + P+LF L + W W+ R++ S +H D HLY+NM SFL KG LE MG+ F + Y L+ +++V+ A VL + F + P+H C+VGFSGVLFAL +L+ P +V GFQV T+YA WLELV+I+F+VP +SF+GH+CGILAG ++V P + + +G TL++ R GP S YS+ T + PP
Sbjct: 15 GRDGQGIALMLMLVRQVQQLERKPPVTLGLMALMYGLHFQKMQTPELFAPYSLCPDRVLSHWDWM------------------------------RIVASGLIHVDDWHLYHNMISFLWKGYNLEDKMGSVRFLLTVGYLLVLCHVLVVVVALVLAMGFQMPEPLHQCSVGFSGVLFALKVLLNHNSPTFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYFP--VMQTTMFSGAHTLSQWIRTIVGPISNQYSTDTHAAPP 258
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.710e-40 Identity = 94/237 (39.66%), Postives = 129/237 (54.43%), Query Frame = 1
Query: 574 GNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLK----PDLFEGL-LAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVP 1269
G + + L + L+ QI QL RKPP+TL LMA M +H + P+LF L + W W R++ S +H D HLY+NM SFL KG LE +G+ F + Y LL +++V+ A VL F + P+H C+VGFSGVLFAL +L+ P +V GFQV T+YA WLELV+I+F+VP +SF+GH+CGILAG ++V P
Sbjct: 15 GRDGQGVALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAPYSLCPDRVLSHWDWT------------------------------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSP 221
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA) HSP 1 Score: 162 bits (410), Expect = 4.050e-40 Identity = 112/285 (39.30%), Postives = 153/285 (53.68%), Query Frame = 1
Query: 550 RRGGGGRRGNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLG-FQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLVTGVTLAR--------------GSRGPSYTYSSGTS 1359
R G +R N YA +A+ L+++ QL KPP T L+A + +HL P G+L D+ VCL PA + G ++ RL S +H D HL+YNM S L+KGV+LE TMGT AFA L+ + S ++V+ A + V ++C VGFS VLFAL YV + R P T +G F +++R+A+W EL+LI +VPNASFLGHLCGILAG+L+V +++ T TLA G RG YTY+ GTS
Sbjct: 2 RNHSGRQRTGNPYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVLPARLLFGDY----------TKVCLKPAKVVKEL-LNGEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVA-LASVYLGFDPGFNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAY----TAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTS 270
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA) HSP 1 Score: 160 bits (405), Expect = 4.150e-40 Identity = 111/263 (42.21%), Postives = 141/263 (53.61%), Query Frame = 1
Query: 550 RRGGGGRRGN-NSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLVTGVTLARGSRGPS 1335
RR G RRG + ++L M+L QI+ L KPP TLALMA SA++L +E L V VC+HPA + GG + +RL++S F H D HLYYNM+S L KGV LE GT F G+ L S V AAW++ + SS M TC VGFS VLFA VL+ P V G V +YA WLELV+I + PNASFLGHLCGILAG++YV I L + + + + + PS
Sbjct: 3 RRRDGRRRGQIDPRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYL----YEFSLPF---------------RVPDVCMHPAKILF-----GG-DWKRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAASSSAPASAPS 240
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: W2QA40_PHYPN (Rhomboid domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QA40_PHYPN) HSP 1 Score: 159 bits (401), Expect = 3.210e-39 Identity = 96/247 (38.87%), Postives = 136/247 (55.06%), Query Frame = 1
Query: 562 GGRRGNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLLDLVTG 1302
G G N + L + L+ QI QL RKPP+TL LMA M LH + + A S+C P + G ++ R+++S +H D HLY+NM SFL KG LE MG+ F + L+ +++V+ A VL F + P++ C+VGFSGVLFAL +L+ P +V GF+V T+YA WLELV+I+F+VP +SF+GH+CGILAG +YV + S+L G
Sbjct: 13 GPNAGRNGQGIALMLMLMQQIQQLERKPPVTLGLMALMYGLHFQKQQTPEIFAP-----------------YSLC--PDRVI------GHWDLTRIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKMGSVRFLLTVGCLLVLCHVLVVIVAVVLATGFQMPGPLYQCSVGFSGVLFALKVLLNHNSPTFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIYVYSSAMQSILSSGAG 234
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: A0A0P1AQE2_PLAHL (Serine protease family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQE2_PLAHL) HSP 1 Score: 157 bits (397), Expect = 9.110e-39 Identity = 93/246 (37.80%), Postives = 136/246 (55.28%), Query Frame = 1
Query: 550 RRGGGGRRGNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALHLK----PDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTI 1275
RRG G + + L + L+ QI QL RKPP+TL L+A M +H + P+LF S L P + + ++ + R+++S +H D HLY+NMASFL KG LE +G+ F + L+ L +V+ A L F + P+H C+VGFSGV+FAL +L+ P ++ GFQV T+YA WLELV+I++MVP +SF+GH+CGILAG +++ P I
Sbjct: 4 RRGRRPNVGRDGQGIALMLTLVQQIHQLERKPPVTLGLIALMYGIHFQKGQTPELFS-----------------------SYSLCPDKVLNRWD------LSRVVVSGLLHVDDWHLYHNMASFLWKGYNLEYKLGSVRFLLTVGGLLVLCHLFVVVVALALAKGFQIPGPLHQCSVGFSGVIFALKVLLNHNSPAFSSLYGFQVPTKYAAWLELVVIHYMVPRSSFIGHMCGILAGYIFLYFPAI 220
BLAST of mRNA_P-littoralis_Contig20.123.1 vs. uniprot
Match: M4B4F7_HYAAE (Rhomboid domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F7_HYAAE) HSP 1 Score: 155 bits (393), Expect = 4.420e-38 Identity = 91/242 (37.60%), Postives = 132/242 (54.55%), Query Frame = 1
Query: 574 GNNSYALILAMKLIHQISQLRRKPPLTLALMAGMSALH----LKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASMFDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHAFAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYVLSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGILYVEVPTIISLL 1287
G N++A+ L + L+ Q+ QL RKPP+TL LMA M L+ + P+LF L L P + + FE + R++ S +H + HLY+NM SFL KG LE +G+ F + + L S +++ A +L F + P+H C+VGFS VLFAL +L+ P T+ GF V T+YA WLELV IY +VP +SF+GH+CGILAG + V ++ S +
Sbjct: 17 GRNNHAIALMLVLLRQVQQLERKPPVTLGLMALMCGLYYQQNITPELFHPYL-----------------------LCPDRVLNQFE------LMRIVASGLIHADEWHLYHNMISFLWKGYNLEYKLGSVQFLLTVGFLLALSHTLVIAVALILATCFQMPGPLHQCSVGFSSVLFALKVILNHDSPAFSTIYGFCVPTKYAAWLELVAIYLLVPQSSFMGHMCGILAGYICVRFQSMRSTM 229
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LJN1 |
| Preferred name | RHBDD1 |
| PFAMs | Rhomboid |
| Model size | 3500 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K09651 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006986,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010941,GO:0010954,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030970,GO:0031224,GO:0031227,GO:0031293,GO:0031323,GO:0031325,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032527,GO:0032879,GO:0033036,GO:0033554,GO:0033619,GO:0034613,GO:0034620,GO:0034644,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045732,GO:0045862,GO:0046907,GO:0048232,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060548,GO:0065007,GO:0070011,GO:0070613,GO:0070727,GO:0070887,GO:0071214,GO:0071310,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098827,GO:0104004,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903317,GO:1903319,GO:1903513,GO:1904211 |
| Exons | 4 |
| Evalue | 7.77e-151 |
| EggNOG OGs | KOG2632@1|root,KOG2632@2759|Eukaryota |
| Ec32 ortholog description | Peptidase S54, rhomboid domain |
| Ec32 ortholog | Ec-17_002690.1 |
| Description | serine-type endopeptidase activity |
| Cds size | 1314 |
| COG category | P |
| BRITE | ko00000,ko01000,ko01002 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789976.9440284-UTR-P-littoralis_Contig20:492382..492886 | 1680789976.9440284-UTR-P-littoralis_Contig20:492382..492886 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 492383..492886 + |
| 1680789976.998341-UTR-P-littoralis_Contig20:499987..501201 | 1680789976.998341-UTR-P-littoralis_Contig20:499987..501201 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 499988..501201 + |
| 1680789977.0127985-UTR-P-littoralis_Contig20:502822..503290 | 1680789977.0127985-UTR-P-littoralis_Contig20:502822..503290 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig20 502823..503290 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789976.9607823-CDS-P-littoralis_Contig20:492886..493203 | 1680789976.9607823-CDS-P-littoralis_Contig20:492886..493203 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 492887..493203 + |
| 1680789976.974181-CDS-P-littoralis_Contig20:498463..498776 | 1680789976.974181-CDS-P-littoralis_Contig20:498463..498776 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 498464..498776 + |
| 1680789976.9860406-CDS-P-littoralis_Contig20:499303..499987 | 1680789976.9860406-CDS-P-littoralis_Contig20:499303..499987 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig20 499304..499987 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.123.1 >prot_P-littoralis_Contig20.123.1 ID=prot_P-littoralis_Contig20.123.1|Name=mRNA_P-littoralis_Contig20.123.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=438bp
MYGLGQLPQGGMRDFRRGGGGRRGNNSYALILAMKLIHQISQLRRKPPLT
LALMAGMSALHLKPDLFEGLLAVGNGIFDWGWLAGGFDLVRSVCLHPASM
FDTFERTGGLEIRRLLISPFVHDSDTHLYYNMASFLLKGVTLELTMGTHA
FAGLLAYSLLASQLMMVLAAWVLLVVFDVSSPMHTCTVGFSGVLFALNYV
LSRRFPGTQTVLGFQVNTRYATWLELVLIYFMVPNASFLGHLCGILAGIL
YVEVPTIISLLDLVTGVTLARGSRGPSYTYSSGTSSGPPSGRDSGNGRRA
TVTRRSGAEPQHEQPEPSSLYDVASDPDAEEAALQEALRRSLLDDSGSGG
RDSERVSTSVRNSRGSAGEAAAAAENLGPAPPLPTAPPPEEPQQGHMSSD
AQSGMTSSADAAAAVNQNEMRRRRLQRLGGGGDHIVL* back to topmRNA from alignment at P-littoralis_Contig20:492383..503290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig20.123.1 ID=mRNA_P-littoralis_Contig20.123.1|Name=mRNA_P-littoralis_Contig20.123.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10908bp|location=Sequence derived from alignment at P-littoralis_Contig20:492383..503290+ (Pylaiella littoralis U1_48)
CACTCGTCCACGTGTGCCCTGTTCCGGCGGCACACAACACGATCTCAGCT
TCTGGATGGTCTTGTTCTTCTCCATTCCATAGTTTTTGTTTTTTTGTTCT
GTGGAGATCGAGTTCGCAGAAGTGCTGCAGCGAACCAGCACACCAGCACT
CCATCTCCTCTCACCTGCGGAGCCTTTCGGTATTACCATCGGTATTACCA
CAACATATCATGTGATACGCTGTTGTACCAGTACAGCAGTAGCCCAAAAG
GAACGAACGCCGCCTTCCCTGCTGCCGTTTTCGCTTGCGTCTTCGGCACA
GAAGTGTATCTCTACCACCGCACACACACTTCCACTTATTTGACCAAGAT
CGCGCTGCTCCACGTTGGGAAACGCAAACCCAACGCTCTGGTAGTAGTTG
CCTTCTAGGAGGGGTTCAGACTCCATACGCGCTGTGTGTACTCTAGCTGC
CCAGATCGACAGAGGGTGTCACAAGCGGCGGCTCTGACTGTTGTTCATCT
CATCATGTACGGATTGGGCCAATTGCCTCAGGGAGGTATGCGAGACTTCA
GGCGCGGTGGCGGTGGAAGGCGAGGCAACAACTCATATGCCCTCATCCTT
GCGATGAAACTCATACACCAGATATCCCAGCTTAGGCGAAAGCCGCCTCT
CACCCTGGCCCTCATGGCGGGGATGTCTGCCCTCCACCTGAAGCCCGATC
TGTTCGAGGGCCTTCTTGCAGTTGGCAACGGGATCTTCGACTGGGGCTGG
CTCGCGGGAGGCTTCGACCTCGTTCGGAGTGTTTGCCTCCACCCTGCATC
CATGTTCGATACCTTCGAACGGTGAGTGAGGAAAGGAAGGGAGGGAGGAT
CATTCGGGAATCAATTATACTGGCCCGCCTCTTAGCTGGGTATCCCGGAC
TGCTGTGTATGTGTGTGTGTTGTCATCCCATATTCTCTGGCACACTAGTC
TGCAAACTACAGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGGTCA
ACACAGGAGGAGTTACCTCCACCTTCCTTCTGCGGTACATGCGTGAGATT
TTTTCTCGCGAGCAGGGGTCCGCGGTCCCTACCCTCGTCGGCGAACCCGA
ATCTGATTTTACTAACAGCATAGCCGCTTTCAAAGTAGCAAAGGAACACA
TTCACCGGGAATCGAACCCCCGTTCCTCTGCATCTAGTGGTTAACGAGGG
ACCGTGTTGTCATCCCATTTATTCTGGGCAACCACACCTTTCGGTATGAG
GCCCACTCTTATGGTGGAGCCGATAAGGCCCTGTGTTAACGACAATCAGG
AAATCAAAATTGAAAAATCAAAAATAGCAAAATCAAAGTTTCAAAGTTTG
ATTTTACGAAAAACACTGCGAGCCATTTAACCCTTGGACCCCCCAGGGGT
CTGAAAAAAATAACCATGGAGCCAAAAATTAACTGATTCCGTTGCGCCGA
TGATTGGCGAATGGTGGACAGTCTCAAAAAAAAAGGACTGACGTCTCGCT
GGCGCTGTCCTGTGAAAAAAGGGTGTGACTTGGTTATACACAGAAATCTG
TCCCCAAATTGCCCTGAAAAAAATGGGGACAGATTCCAGTCTAAAGCTAC
ACCAAACTTTTTTTGGGGGGTCACCTACACGAAAGTTGTTTGTTTAGTTT
TACAGGATGTTGCTTCAAACAAAGGGATACTGCTGTATGCAAGGAGGGCG
CAAGCAGCAATACCGCCACTTAGCATGGCAGATCAGGGTACCCCGCTCGG
CAACCACACAGCAGTAGGGTTCCACTCCGCCAGGTTATACCCGCGCACGA
CATTCTTTCAGGGTCTACAGCATCATCACCATCATCATCATCAGCAGCAG
CTTCACTACGATACAGCAGTCCCATGATAAAACACGTATACTTCCTCTGT
ATCATAAGTCTGTGCCGTTACGTTTTTACGCCCCCTCAACGGTGTCCGAT
GTCTTCGGCGATAATTTTTTCGAAATCTTCGGAGTTTTTCGGGTTGAAAC
ACATATACATTTTTTTTCTTGCGCACTACCCTGCGCATGGGCTAGCGGCT
AACAAAAAAGTAGTCAGGCCAAAAATGGCCGTATTTAACCCTTTCCAGCG
GTGAAGTGGGGGGCGGGGGCAAAAAAAAAAACAATGCAATCCCCCCCAAA
ATTATCCCTGACCCTGAACCTAGCCCCCCCTACCTCAAAGATTCATGTCG
AGTCCCTCCTTACTAAAATCAGTATCATAGTGACGCGACTCTGAAACCAA
GACACTTGGGTTTGCCACACTTAAACGAAGATACTTGGGACTCGTGCTCT
AAAACCAAGACATCTGGCGGAATCAAAATTCTTTAAATGGACCAAAATGG
GCATATTTTGACTTCATTTTAGTATAAACAACTGGCTTTTTTTTTGTTCT
TTTTTTTGCATCAGCTTCTTTGAGACTTCATCTTTCGAAGGAACCTAACT
ATAGGATGATCGAAACAGTATGGATGCGCAAACAATTACACGCCCATAAC
AGCCCAGACTTATGATACAGAGGAAGTATACCTGGTATATCATGGTATGT
TGCATGATCAACGCAAGGGTGTCGGCATGTGATGGTACCCATGTGATGAT
ACTCGTACGCGATCGTCGGGTTTATGTCTGTGAGCTTTCAAACGTGCGTG
GCACGATGTGTCTGTTTGTAGTGTCGGCCCGCGTGCGCGTGGTGTGTGTA
TCTCCAACCAATCGCACGACACATCAATCAGCTGGTTCAGCATGCACAGC
AGCAGTCAGATCCAGAAATCAGGGTGTATGTGTTCTAAGTGCAGCAGCAG
AACGTCATCGTCAATCAGCGTTTCATCACAGCGGTATAGTCTAACATATG
TATCATGTATTATGTTTGTGTGAATGTGTGCAAGGCAGGGAGGGGTGCCG
GCATGGTGTGTGATACAAGACGATCGCAGTTAGTTGTGTCCACGCTGTAG
AGGGAAGACACAAAAACACACAACAAAACCTATAACGATCGGGCGCGCTT
GCTCTCCCATAATAATAATAAAAACTAAATGTGGTACCGAGGCAGCCAAC
GATTGGTCAATCCACACACATTCCATCGAGCGCAAGGAACCACACCCAAA
ATACCTGTAGAAAGGCGCCTTCAAAACCCAAGTCACAAAAAAACAGGTGT
CCCCAAATTGTTCCCAATCGGGGTTGGGGGCTTCAAAGGGTTAACGGATC
AGCTTGGTAGAGGCCTGTTAACGCCGCCGGGATCCAAAACCCCTGATTGA
TGATGATGTCACCATCGATCGGCACTGCTGTAAACATAACAACAACAGCA
GCAGCAGTACAGATACTACATGTATCAGAGCAGCACTGCAACACGCTGAT
GCTACGTCGCTGAGAGCCACCGCGTTTGTGTTTTGTGTGTCTGTCGGTTT
GTTTGTGCGTGTTGGCTCATCATGGACTCCAGACTGCTGTACGCGTCTGT
CTGTCTGCTGTTAGTTGTTGTTTGGCTATCGTTGTCCTGCTCCAAGTGGG
TGTTGTCTGGTGCCTCATCATGCGAGTCTGTCTGTCTTTGTTCTGCTCTA
GGTTTGGTGCTGGTTTTGACATGCCTGGTGCGACGGCACACCTCTCTCTC
TGTGTTCTGTGGGTTGCGTCGGCGTGCCCTGTGCCTCTGTCTGCTTGTCT
GTGGTGTGGTGCGCGAGCCACATCGTTCACAAAGCCTTCGATCGGGTTAA
GGCCCCCACTTTTGATTTTGATTTTCTGGCAATTAAGTCTTTTTGAACTT
CTTTAGTCTGCCTGTGATGTCAAAGAAATCAGAATTGTGGTCGGTAGGTC
TTGAGAGCCTCGACCAATCAGAGACCAATTTTGATTTTGATTCTTTTTAA
TTCTGATTTCCTAAACAGCGTTAACACAGGGCCTAACTGGAATCCAAGGG
TTTCACATGAGGAATTGGAATCCAAATTCCAGGTCTGGAAAAAATTTCTA
TCTTGTGGGGGTTGTTTTCGGTCGGAATTGGAAAATATTTTCCATTTCTC
CAAGCTACTCGGCTGGAATCTGCCCTCGGATTCCAGGCCAAATGACCTCG
GATTCCAAGCTGGAATCCGTCGCGCGCGCGCAGCCACGAGGTTACGCCGC
AGTGGTTCACAGCACACAACAAGCACAAATACATAAATACACACAATCGA
GCACACAAGCACACGGGCCAGGTGCAGGTACCAAAGCTACGTGCGATCCT
GACGGTGCTGGCGATTACGCTTGCCGCTCTGCGCCATCAGCAGCAGTTTA
TCGAAATTAGCCCAAACCGCCTGCCGTCCGGCAACCCCATGAGTTCCAAT
CGCTGTCCAGATTTTCCGATTCTCCCATGTAAAGTCACAGGAAACGCTCT
GATGCCAAGGATAAATGTTACTTCGGTATTCTCTATGATAATCTAATCAA
GTCAAAACAACCTATTTTAGCTAATCTCTCCCCAAGTCTTTGGTGCGAGG
AGTAGGGGTCATTGGGGTTTGATCGGCAGACGGCACCATGGAGCAGCTAC
GTGTGTGTATGTCGGCACGTTCAGATCTACTGCTTGGCCTGATATATCGA
AAGCTGCAGCAGTGGCTCACAAAGTCCGCAAACTGGATCTGAACTGGACC
GACGCCAACGGCTCGTCACTACTCTGCTCGCCGCCAAGGACCTCAACCAA
CTAAACTGCAGGCCATCCGAGGTAGCTCGTGGCACCAGCTACTGCTACAG
ACCCGCAGTTCAGGAGGTTGAGGTCTGTGACGGGGAGTACAGCAAGTGGC
AAGCCCTTAGTTTCGGTCAAGTTCGGGTCCAGATTGCGGACTTTTTGAGC
CGCTGCTGCAGCCTTCGATATCTCAGCCCCGGCAGCATGTCTGAAGTTGC
CGACACACACGTAGCTGCTTTATGGTGTCCTCTGCTGATGGAGCCCCAGT
GACCCCTACTCCTCGCACCACAGACCGAGTGGGAGGTGAAGCCAAATATG
CTGTTTTGACTTGGTTTTTATGTTAAATAAGTTATCATGATATTAATGAC
GGAGATTGGAGGTAGGCGTGTGATATGCATGTAAAGAGAAGCCACAGCCG
CCGTTGTGTGCGATAACCAACAGTTTCCTCTTTCCCGACGCCTTCCTCCT
AGTGTGAGGTACCTAGTGTAGGATGGTCAGGGCCACTTCGCTGTCTTTCA
AAATTCGTGCCTTTCAAAAATCGGTTGTCTGTGGACCCTTGAAGTTTGAT
CAGAACAACGCGCTGCTGCGGTGAGCGTGATCATTACCTTTTAGTCTACG
GTCTACGTAACAGAGGCAGCTTTGGTCATATACTGCTGCTGTACAATAGC
ACATCGAGTGAGCTCGACCCCTTGAGCAAAATGTTCACAACATTATCGAA
GAAGAAACGCGGCGGGACTAAGGGGGTTCTAGCAGTTGGTGTCTTCGTTT
AATATCCTTCCAGAGATTTCCGCACTGCTACACCGCTGGACACAATTCCG
GCCGGGACTCAGAGCCTTTCAGTTTTTTTGTTGCCCGATTGTTAAATCTC
GCATTCGCAAAAAAAACGAGCTACTTCTGCTGCTCCTCTAATGTACGAAG
TATGATACAGTAACGTGGCCGGGGGCACCTTGTCCTAACGTCACCTGCGT
GACACGACGATGCTTGTTGTACTACATTGTCCGTCGCGCATCCTTCGCCT
GATTTGTTATGGTACACTTTGCACGGGGTGGGTCTTCGCCTCGCCACTGA
ACCTGCGTCCGCTCCACACAGCACCCTCTTGGCTTGTCGATAACGTTTGT
AGTCAGGCCCCCACATTGCTGTGACAGGGTTGGTTCCTGCATGGACCTGT
CCAGTCTTGTTTGAACCAGTCCATTCAGGCATGAAATATTTCATCCAGGC
ATGAAATAGCCCACGAAACGTGGCGCGCGAACATTGAGGTATCAAGGCCC
GTAACCTGGCAGAATGGAACAGATAGGTTTGTGCTTCGTCTCTCCCTGCG
CCCAAAGGTGGTGATGTTTCATGCTGTCCTACGGACAGGTGGATGGCGTC
TACCCACACCGCCGCCTGATTCCGATTATGCGGGCTGTCCTTATCGCCCC
CCCCCCCGACCCGTTCTTGAAATGTTTGCAGGACCGGCGGCCTCGAGATT
CGTCGACTGCTGATATCTCCGTTCGTGCACGACAGCGACACCCATCTCTA
CTACAACATGGCATCGTTTTTGCTCAAAGGGGTGACGCTGGAGCTGACGA
TGGGGACACACGCTTTCGCCGGGCTGCTGGCTTACAGCCTCTTGGCTTCG
CAACTTATGATGGTTCTCGCTGCGTGGGTCTTGCTGGTGGTGTTCGACGT
GTCGTCGCCAATGCACACCTGCACCGTGGGATTTAGCGGGGTGCTGTTCG
CGCTCAATTACGTATTGTCACGACGGTTCCCCGGGACACAAACGGTGAGT
CGGACACAAATGCCGCACTAGCATTTGGATGATGCGTATCATACGATGGT
GTGCGGTTTCGTTCGCGTTTGTTGTTTGAGGCGACACGCATGCCCATGCC
CGCCCTCGCGTGTCGCGGACAGTATTCTTATTGGAACTATTGTTTATGAG
GGCGGACAGCTGTTGACTGACTTGCTTGCTCGTCCATGTTGCTGATGTTG
CGTGTTTATCATGGGTGACTTGTGATTTTTGTGGCAATCGACATCTTCTA
CAGCAGTGGTTCACGTACAGCTGTGAGATTACCGTGTGAAGTCAAACAAT
CGGTGCATGGAAATTCATTCAGTGAGTGGTCATGTCGGGATTGGATCACA
GTCGTGATTTTTACGGCCACCGGGTACATCGGATTGTGTTTGCTTAGTCA
GACCCTCCGGTATGTTGCCGTGCCCTTCTCGTGCCCACTCTTAAGAAACT
TGTCGCCGACCTTCCGAAATCGTGTGCAATTATTACCTCTGCTTCGTTGT
CTCGTCGCGGTGTGTCAACAGGTACTTGGCTTTCAAGTTAACACCCGCTA
CGCCACGTGGTTGGAGCTCGTCCTGATTTATTTCATGGTACCGAATGCTT
CTTTCTTGGGACACCTGTGCGGGATACTGGCCGGAATTTTGTACGTCGAG
GTGCCGACCATTATAAGCCTCCTGGACCTCGTCACGGGAGTCACCCTTGC
CAGAGGTAGTCGAGGACCTTCGTACACGTACAGCAGCGGCACGAGCTCGG
GGCCTCCTTCAGGTCGTGACAGCGGCAACGGCAGGCGGGCAACGGTAACG
CGCAGAAGCGGGGCAGAACCCCAGCACGAGCAGCCGGAGCCTTCGTCTTT
ATACGATGTGGCTAGTGACCCTGACGCTGAAGAGGCCGCTTTGCAGGAGG
CACTGCGGCGTTCCTTGCTAGACGACAGTGGAAGCGGCGGCCGCGATAGC
GAAAGGGTTTCAACGAGCGTTCGCAACAGCAGAGGATCGGCGGGGGAGGC
GGCTGCGGCAGCGGAGAATTTAGGGCCAGCACCGCCTTTGCCGACCGCCC
CACCGCCAGAGGAACCCCAGCAGGGACATATGTCCAGCGACGCACAGAGC
GGGATGACAAGTAGTGCTGATGCTGCTGCTGCTGTGAACCAGAATGAAAT
GCGCAGGAGGCGCCTGCAGCGCTTAGGTGGCGGTGGTGATCACATTGTGT
TGTAGTCACAGAGAGAGAGAGAAAACGTGCGCGCGAATTTTCAGAAAAAG
TGGGTATTCGCTGCTTTCTATGTACATAGTGGGCAAACTTGATCTTCCGT
GTGTTTGGTGGCCTCGGGATTGTAAGGTGGCGTGTTTGCTTTGTTTTTGA
GGTGCAAGGGTTTGTCTGAATGCTGTGTTGTGCTGTGCTTGCTGTCGGCA
CTTTTCCCAAGTGTAATCCAGTGCACGCATTTTTGAAATACTAGCTATCT
CATGGTTTTCGTGCACAGCTGCCTTTTTTTACCTGGTTTCGGTGCTATGA
TCTATTTGTTTCTTATTGTGTTTTTAAGTGAGCCGTTTGGCTCTGTCTTG
AGGTGAATGGTGCTGTCTTGTTTAAGGCTGTGTTGTGCTTTTCTGGCTGT
CGGAAAGCTTGCCAAGTTTAAATTAACGTTTCATTGTTTTTTGTCGAAAT
CTTTGCCTCGCGCGTTGAACCGTGCTCCTTTGCATGGCACACGCTGCACT
AGAGTTCTTGCTGAACAGATCTCAAACCATCGTGGTTTTGGTCAGCTTCA
ATGTCTGTCGCATCAACGATCAGGCAAAGTGATTGAATTCCGCGAAGGAA
ACGTTTTTTCCTTAGAAGTGATATACTTGCCTAGTGGAAGCCCCAGCCCC
AACTGAATGCCGCCTCATTCTTCCCCCCAACCAACGAGAGAGGAGGGGGG
AAGGAGAAGCAAAGGGGTGCCTAATACAAAAGGCGAAAATAAAAGGGAAA
CATGAAAGGGAACAAAATAAAGTGCATACAGAGGGGGGGGGGGTTGGAAT
GGCCTTCACAATCCTCATTTTGATACAAGAAAGTCGCACTTGCTGACTTG
ATGCTCGCTTGTTTAGAGAAAAGAAGGAGCGCGAGGGGGAGCGCTTGACA
TACACACGCGTACAAACGCCACAACGTAAATTCGCCCACGTCAACATGTC
TGGGAATCGGGAATCGACTCTGGAGTCGGCGACGGCGCACCCACTTCCGC
CAGCAACTCGTGCAGTAACGTCACGCCCACGTTCCCGCCGCAGAGCACCA
CCCCGACCCTCTTCATGTCACGGGACATTCCTCGGACGTGAGGTGACATC
AACGCGGCCACTCCGACGGCTGCGCTCGGCTCGATCACGAGTTTCATCCG
TTCGTAAATCACCCGCATCCAAAACCGGATGTCCTCCTCTGACACGGTGA
CTATCTCGTCCACGGAATCCCTGTGTAACGGTGGCGAGGGCACAGAGGAC
AAGACGCAATGCTTCGTAATTCGAGTTTCAAATGCAGTCTGAAACATTCA
AGCTTTGAAAACATTTCTCTTGGCTTCACGAGAGAGCTAAAGAAAGCGAA
AAAAACACGGCTGTGATTGCGAACGCCACGCCATGTGGAAAAAAAAAGGT
CCAAGGGGTACGATACTAGGCCTAGATCGGGGTGTCATTGGGGGTCAGGA
ACAGGCCGCGAGTTGCACCTGACGATGGGCCATGTCAAGCTCCCAAGCGT
GGTGCGGAGACCATCGGCTATAGTGTCTGGCATCCCCTCGCAATCGTGCC
CTTGTAAGTGGCCGCTCTGTAAAAAATGTAAAAAGAAAATAGCAAGTCGT
TAGTCGGCCCCACCGCTTACAGACATGGCGAGGGTGCACGCCCACAGCAT
CTTCACGAGTGCGATCGCGAGGTGAAGCAAAACGTAAATGTGCCCATTGA
TCACATTATACGTCAGCTCCTTATGCGTGCACACCATCGTACCGTAGGTG
ACAGTAGATAACACACGTACAGAAGATACGACACCCCCAACTAGAAACCA
CACCCTGTGATACTTTTTTTGGGCACGAAAAAACACGGCCCATTATCACA
CGGTGACAGAAGATACCACACCCCCCAGAGATAATTTTTCGGCGTGCCAC
ATACCACACCCCCGAAACACGGAGCCCCCGTGTTCATGCGCAACGGGTGT
GGTAAACCAACACCTGACACACATGAAGCATTCAGTCATACCCAGCTGGG
CAGGTATGCAGACACCTCCAGACCATATGGAGGTGGACAACCCTCCCGGA
AACATCACGGCTCAGACAGCGCCGACTGCATCTGCAACGGCGCCTTCACG
CGGGATTGCGTCATTTTTTGGAGACCCCGCCGCCAAGCCCACGGATGGCC
AGACGCCAGCAGCAGTAGCGCCTGCCTCCGCACGAGCTGCTGCGAAAAGC
CACACAACAGAGTCTACTGAGGCCCGCACAGCAAAGCCTGCTGAGGCCCG
CACAGCAGAGCGTGCTGAGACTCGAACAACGACGCGCGCTGGCCTACCTG
CGCCCTCTCGCTCGGCGGCATAGAGCTATCACACCCCTTGAAGGATTTGT
TTCACAGCAGCATCTGTTGGGAATTGAGATACCAGACCCCTTTGTATCAC
ACACCCTGGTTTTATCACACCCCTTGTAGGAGTTCTTACACAGCAGCACC
TTGTTTGCATTTGAGATATCACACCCCTTTTATCACACCCCCTGGTTTTG
TCACATCCCTCGCAGGAGTTGTTTAGCAGCTGCAATCTGGTAGCAATAGT
AGTTATCACACCCCTCATTTAACACACTCCCTTTTATCACACCCCCTGAG
AGCGAGCTGAAATATTGGGCACTTTATCACACGGTGACAGAAGATAGCAC
ACCCCCCTGTAGATACCACACCCTGTGATAAGTTTTTTAAGTAGATACCA
CACCCTGTGATAGGTTTTTTGAACTGAAATATGTTATCACAGGGGTGTGT
TATCTACTGTCACCTACGGTAGACTTTAGGCTTGCTGGTCTGCATCAATT
CGAAAACACGTTTTTGCAGTCGAGCATTCAATCGCCCTTACCTGTTTTGA
TCTGAACGCGTCTGCTGCCTTTTGCGGTTCTGCACCGATCACCCATATGC
CGGGGCAAAGGGACTTCACGGCGGTCGCCACCCCACTGATCAGTCCACCA
CCCCCTATTGGTACAATGACCGCGTCGAGATCTGCGCCCCCGGTTACTTC
CTTGACCTGCTGCACTAGCTCAAGGCCCACCGTGCCTTGCCTAGTTCATG
GCGTCCCACGAGTTGGGGTGCAAAACGAACAAATCAGGTATAGCAGGTAG
CCCAAGGACGGTGGGGAACGAGAGCACGTGTAACGGAGGGGGGGGGAGAA
AGAGAGGGAGAGAGAGAACACATATTTAGAGGAATAGACGCGAGGCGTGC
TACGATAGCCATGTCAGATACAAACCTAGCCCCAGACACCAATCAAGAGG
ACCACTGTTCCAACCTAGAAATATGAGTGCTCTTACCCCTCAAATAAGAA
TCGACCCT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig20:492383..503290+ >mRNA_P-littoralis_Contig20.123.1 ID=mRNA_P-littoralis_Contig20.123.1|Name=mRNA_P-littoralis_Contig20.123.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1314bp|location=Sequence derived from alignment at P-littoralis_Contig20:492383..503290+ (Pylaiella littoralis U1_48)
ATGTACGGATTGGGCCAATTGCCTCAGGGAGGTATGCGAGACTTCAGGCG
CGGTGGCGGTGGAAGGCGAGGCAACAACTCATATGCCCTCATCCTTGCGA
TGAAACTCATACACCAGATATCCCAGCTTAGGCGAAAGCCGCCTCTCACC
CTGGCCCTCATGGCGGGGATGTCTGCCCTCCACCTGAAGCCCGATCTGTT
CGAGGGCCTTCTTGCAGTTGGCAACGGGATCTTCGACTGGGGCTGGCTCG
CGGGAGGCTTCGACCTCGTTCGGAGTGTTTGCCTCCACCCTGCATCCATG
TTCGATACCTTCGAACGGACCGGCGGCCTCGAGATTCGTCGACTGCTGAT
ATCTCCGTTCGTGCACGACAGCGACACCCATCTCTACTACAACATGGCAT
CGTTTTTGCTCAAAGGGGTGACGCTGGAGCTGACGATGGGGACACACGCT
TTCGCCGGGCTGCTGGCTTACAGCCTCTTGGCTTCGCAACTTATGATGGT
TCTCGCTGCGTGGGTCTTGCTGGTGGTGTTCGACGTGTCGTCGCCAATGC
ACACCTGCACCGTGGGATTTAGCGGGGTGCTGTTCGCGCTCAATTACGTA
TTGTCACGACGGTTCCCCGGGACACAAACGGTACTTGGCTTTCAAGTTAA
CACCCGCTACGCCACGTGGTTGGAGCTCGTCCTGATTTATTTCATGGTAC
CGAATGCTTCTTTCTTGGGACACCTGTGCGGGATACTGGCCGGAATTTTG
TACGTCGAGGTGCCGACCATTATAAGCCTCCTGGACCTCGTCACGGGAGT
CACCCTTGCCAGAGGTAGTCGAGGACCTTCGTACACGTACAGCAGCGGCA
CGAGCTCGGGGCCTCCTTCAGGTCGTGACAGCGGCAACGGCAGGCGGGCA
ACGGTAACGCGCAGAAGCGGGGCAGAACCCCAGCACGAGCAGCCGGAGCC
TTCGTCTTTATACGATGTGGCTAGTGACCCTGACGCTGAAGAGGCCGCTT
TGCAGGAGGCACTGCGGCGTTCCTTGCTAGACGACAGTGGAAGCGGCGGC
CGCGATAGCGAAAGGGTTTCAACGAGCGTTCGCAACAGCAGAGGATCGGC
GGGGGAGGCGGCTGCGGCAGCGGAGAATTTAGGGCCAGCACCGCCTTTGC
CGACCGCCCCACCGCCAGAGGAACCCCAGCAGGGACATATGTCCAGCGAC
GCACAGAGCGGGATGACAAGTAGTGCTGATGCTGCTGCTGCTGTGAACCA
GAATGAAATGCGCAGGAGGCGCCTGCAGCGCTTAGGTGGCGGTGGTGATC
ACATTGTGTTGTAG back to top
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