mRNA_P-littoralis_Contig199.65.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig199.65.1
Unique NamemRNA_P-littoralis_Contig199.65.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: D7G4N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N4_ECTSI)

HSP 1 Score: 521 bits (1341), Expect = 5.380e-169
Identity = 297/466 (63.73%), Postives = 329/466 (70.60%), Query Frame = 1 
Query:  820 CTSKVAEYAATCDVTPPVRGAKKKRKLKDKRQKTGGRSSPSRNR-HAPPPFKKTATPIGNNADNXXXXXXXXXXXYESPALEGIFHNGAMYLVDARRRVFSAQRDGQGNLVEVGTFDDGRGKVVMIGQPPSGGPPDGTTSLAVAVE-------GVVPSEGAPDSTGFSGPA----GSSXXXXXXXXXXXXXXXXEAEAGVLEEEKEGVAGTETGNIIDYPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRLGDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRVRKKKSEWVV 2181
            CTSKVAEY+A         G   KR+ K K++K   + S   ++ H PP   +  +P  +N               ESP LEGI H+GAMYLVDARRRVFSAQRD QG LVEVGTFDD  GKV+MI                           G++ S   P S     PA     +        XXXXXXXXX   AG  E+    V       +++YPFEVEE DHCETSERAY+DISPLL  LAA LGK P++LVIYDPYYCQGST+ RLASLGFPRVHNRKEDFYEVVKNGNIP+HDVVVTNPPFSGEH+ KIL FC R+GAKPWFLLLPNYVYLKDYYE SLGRR G+GAT PFYLTPPKRY YYSP GSRLKVKSSERKTSPFNTFWYI LGD  VTSKILQSYDA SRK + +ARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDR+RKKK+EW+V
Sbjct:   97 CTSKVAEYSAGTSDDKGTAGTPVKRETKSKKKKRRDKGSLRHDQDHVPPSADEETSPDNDN---------------ESPVLEGIVHDGAMYLVDARRRVFSAQRDEQGGLVEVGTFDDKGGKVIMIXXXXXXXXXXXXXXXXXXXXXXXXXXAGLISS---PPSALHRDPATKTDATEAGNGKAKXXXXXXXXXXXXAGSSEDVAASVGAEAESVVVEYPFEVEECDHCETSERAYSDISPLLSALAAELGKPPEDLVIYDPYYCQGSTVGRLASLGFPRVHNRKEDFYEVVKNGNIPQHDVVVTNPPFSGEHMPKILKFCARQGAKPWFLLLPNYVYLKDYYEPSLGRRSGQGATRPFYLTPPKRYMYYSPQGSRLKVKSSERKTSPFNTFWYIHLGDCAVTSKILQSYDAASRKLDINARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRIRKKKNEWIV 544
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A835YHP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP0_9STRA)

HSP 1 Score: 234 bits (598), Expect = 6.720e-65
Identity = 123/263 (46.77%), Postives = 160/263 (60.84%), Query Frame = 1 
Query: 1432 IDYPFEVEELDHCETSE--------------------RAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRLGDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRVRK 2160
            +DYPF+V++ +HCETS                      AYA I+PLL  LAA  GK   +L IYDPYYCQGS +    +LGFPRVHN KEDFY V++ G +P+HD +VTNPP+SG+HV ++L  C     +PW LLLPNYVY K++Y     R+    +    ++TPPKRY YY         +SSERKTSPF TFWYI LG    T   L ++ A   +     RCC+AR    +PY+ MDS+DP RK+ RDR+RS  R++K
Sbjct:   96 VDYPFDVDQDNHCETSXXXXXXXXXXXXXXXXXXXXAEAYAHIAPLLEALAAAKGKPKAKLRIYDPYYCQGSVVANFVALGFPRVHNVKEDFYRVIEEGRVPKHDALVTNPPYSGDHVERLLRHCV-SSKRPWLLLLPNYVYTKEFY-----RQLTAASKTAVFITPPKRYHYYR--------QSSERKTSPFITFWYIDLGPKH-TQAALAAWQAAQARLPESERCCLARAASALPYRCMDSSDPLRKRERDRRRSKQRLQK 343
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S3XRY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRY6_HETAK)

HSP 1 Score: 212 bits (539), Expect = 6.780e-58
Identity = 115/260 (44.23%), Postives = 157/260 (60.38%), Query Frame = 1 
Query: 1372 EAGVLEEEKEGVAGTETGNIID------YPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRL-GDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARD 2130
            +AG L+  + G  G E G++ D      YP+ V+E DHCET E AY DI+ +L  +A  L K  + L IYDPY+CQG  I     LGF  V+N+ EDFYE V + + P+ DV+VTNPP+SG+H+ +IL FC     KPWFLL+PN+VY+K+YY +            P Y+TP KRY+YYSP  SR  VKSSERKTSPF +FWY  L    G  + +  +    +R         +AR  +Q+P + +D NDP +++ RD
Sbjct:   25 QAGFLDSGR-GNDGQEAGHLADKPQVFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIAS-KKPWFLLVPNWVYMKEYYMNLTKN------IKPIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADLTARHGRAAAVFLANQTPTRGGGEGGGAHLARGPRQLPERYLDQNDPAKRRLRD 276
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S4D5V1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5V1_HETAK)

HSP 1 Score: 212 bits (539), Expect = 5.910e-57
Identity = 115/260 (44.23%), Postives = 157/260 (60.38%), Query Frame = 1 
Query: 1372 EAGVLEEEKEGVAGTETGNIID------YPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRL-GDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARD 2130
            +AG L+  + G  G E G++ D      YP+ V+E DHCET E AY DI+ +L  +A  L K  + L IYDPY+CQG  I     LGF  V+N+ EDFYE V + + P+ DV+VTNPP+SG+H+ +IL FC     KPWFLL+PN+VY+K+YY +            P Y+TP KRY+YYSP  SR  VKSSERKTSPF +FWY  L    G  + +  +    +R         +AR  +Q+P + +D NDP +++ RD
Sbjct:  100 QAGFLDSGR-GNDGQEAGHLADKPQVFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIAS-KKPWFLLVPNWVYMKEYYMNLTKN------IKPIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADLTARHGRAAAVFLANQTPTRGGGEGGGAHLARGPRQLPERYLDQNDPAKRRLRD 351
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: L1JYH6_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYH6_GUITC)

HSP 1 Score: 191 bits (485), Expect = 2.230e-52
Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 1 
Query: 1444 FEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYI 1968
            F VE  DHCET   AY DI P+LL +A+ +GK   EL+IYDPYYC G     L   GF  V+N+ EDFYE VK G  P  DV+VTNPP+S +H+ ++ SFC+    KPW +L+PNYVY KDYYE  L     +    PFY+ PP RY Y SPAG+R    S E+KTSPF +FW+I
Sbjct:    1 FSVEHQDHCETPGEAYDDIVPVLLAIASNIGKRADELMIYDPYYCNGLVAQNLRDRGFQHVYNKNEDFYEAVKQGTTPPFDVLVTNPPYSNDHIERLFSFCS-SCEKPWMVLVPNYVYTKDYYEKML-----KSGVRPFYVIPPNRYEYISPAGAR---GSREKKTSPFVSFWFI 166
[Close]
BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S0QTD9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTD9_9CRYP)

HSP 1 Score: 192 bits (487), Expect = 2.250e-51
Identity = 100/235 (42.55%), Postives = 146/235 (62.13%), Query Frame = 1 
Query: 1438 YPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPP-KRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRLGDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARDRQR 2139
            + FE ++ DHCETSE AY DIS  L  LA+ LGKTP++L IYDPYYC G+ +  LA+ GF  V+N+ EDFY  +  G +P +DV VTNPP+SG+H+ ++L FC  E +KP+F L+PNYVY K YY+      P      PFYL P  +RY +++P G R K    E+KTSPF +FWY   G+   T+ +++ +   +     D    + +  + +P+++  + D  RK+ R +QR
Sbjct:   21 HTFETDKDDHCETSEEAYDDISVFLCRLASILGKTPKDLAIYDPYYCNGAVVKHLAARGFGNVYNKNEDFYRTIAEGRVPHYDVCVTNPPYSGDHIERMLKFCV-ESSKPFFCLVPNYVYSKPYYD------PLTEKCRPFYLIPENRRYEFWTPGGFR-KQSLREKKTSPFISFWYCHAGE--QTAALIKWWRKRTCFDSVDKSTVLVQNLRLLPHRVKATFDKNRKRLRKKQR 245
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BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S3GZA9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZA9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.130e-48
Identity = 90/189 (47.62%), Postives = 122/189 (64.55%), Query Frame = 1 
Query: 1435 DYPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTRE-GAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPP--KRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRLGDGGVT 1992
            DYP+ V   DHCE+   AY DI   L+ +A  LGKT + L I+DPY+C+GS   RLA++GFP V N K DFYE +    +P++DV++TNPP+SG H+ ++L +C    G +PWFLLLPNYVY KDYY     R   +G + PFY+TP   +RY Y +P G R   + S + TSPF TFWY ++ +   T
Sbjct:   35 DYPYPVVPDDHCESPMEAYQDIEHFLVVIAKSLGKTKESLRIFDPYFCEGSMKERLAAIGFPNVTNEKRDFYESITTNTVPDYDVLITNPPYSGTHMERLLQYCNENNGTRPWFLLLPNYVYTKDYYAPIFERN--KGGSKPFYVTPANGRRYLYTTPKGRR--QEKSGKFTSPFPTFWYCQIHENKDT 219
[Close]
BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: R1ENP6_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ENP6_EMIHU)

HSP 1 Score: 187 bits (474), Expect = 2.830e-48
Identity = 99/239 (41.42%), Postives = 136/239 (56.90%), Query Frame = 1 
Query: 1444 FEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVKSSERK--------------TSPFNTFWYIRLGDGGVTSKILQSYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRK 2118
            F   E DHCET+  AYA I  LL  +A   G  P+EL I+DPYYC G+    LA+LGFP VHN  EDFY  + +G++PEHDV++TNPP++  H  ++L+ C   G  PW  L+PN+VY KDYY ++LGR  G   T PFY+ P KRY Y++P G R  + S   K              TSPF +FWY     GG          A+ ++      C +  +T+++P  ++  +DPRRK
Sbjct:  109 FSAAEDDHCETAPEAYAHIVSLLRLVARKRGVPPEELRIWDPYYCNGAVARHLAALGFPHVHNANEDFYARLDSGDLPEHDVLLTNPPYTHPHPERLLAHCAASGT-PWLALMPNWVYTKDYYWAALGRSHGTADTQPFYIAPRKRYNYWTPRGRRSDLTSGGAKAKTHGHTNAALGIRTSPFVSFWYC----GGFGP-------ALRKRVTPPEGCVLCWSTEELPPGVLSESDPRRK 335
[Close]
BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S4P7Q6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7Q6_GUITH)

HSP 1 Score: 191 bits (484), Expect = 5.530e-48
Identity = 109/251 (43.43%), Postives = 148/251 (58.96%), Query Frame = 1 
Query: 1396 KEGVAG-TETGNIIDYPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSP---AGSRLKV-KSSERKTSPFNTFWYIRLGDGGVTSKILQSYDA----VSRKAESDARCCVARTTQQIPYKMMDSNDPRRKK 2121
            +EGV   T    ++ + FE  + DH ET   AY  I PLL ++A    K P EL IYDP++C GS    LASLGF  V+N+ EDFYE+VK+  IPEHD+VVTNPP+S +H+ + L + +    KPW LL+PNYVY KDY+ SSL  R      LP +LTPP RY Y SP   A ++ ++ KS E KT+P+ +FWY+       T  I+Q        ++ K      C + +  +Q+P  M DS DP RK+
Sbjct:  262 REGVESPTSQPALVRHSFETTDADHAETPREAYEHILPLLHKMAEAASKKPSELRIYDPFFCTGSMKRHLASLGFTNVYNKNEDFYEMVKSKRIPEHDMVVTNPPYSLDHIPRFLRWLSVND-KPWLLLVPNYVYTKDYFSSSLRGR------LPMFLTPPGRYVYESPKHVANAQGQIRKSGEHKTAPYVSFWYVE------TRPIIQPNQVHTWWMAEKMFDKTNCRLCKNVEQLPANMRDSFDPLRKR 499
[Close]
BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Match: A0A7S1L872_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1L872_ALECA)

HSP 1 Score: 184 bits (466), Expect = 1.190e-46
Identity = 98/205 (47.80%), Postives = 126/205 (61.46%), Query Frame = 1 
Query: 1435 DYPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELVIYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPPFSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLPFYLTPPKRYTYYSPAGSRLKVK-------SSERKTSPFNTFWYIRLGDGGVTSKILQSYDAVSR 2028
            +YPF V E DHCET   A+ D++P+LL LA  LG+ P  L IYDP+YC G+T+  L  LGF  VHNR EDFY VV+ G +P HDVVVTNPP+SG HV ++L +C R  A+P+ LLLP+Y   K +YE +LG     G+ L  YL P KRY Y++P G R   K        S  +TSPF + W++ L          +S DAV R
Sbjct:  202 EYPFPVCEDDHCETGLEAFRDVAPVLLWLAQALGREPATLRIYDPFYCAGATVAHLGELGFESVHNRCEDFYAVVRKGQVPAHDVVVTNPPYSGNHVEELLCWC-RANARPFLLLLPDYFCGKPFYEGALGGAAEAGSML--YLRPRKRYAYWTPKGLRATDKVQQQHAGGSGNRTSPFTSSWHVCLAPA-------KSADAVQR 396
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig199.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N4_ECTSI5.380e-16963.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHP0_9STRA6.720e-6546.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XRY6_HETAK6.780e-5844.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D5V1_HETAK5.910e-5744.23Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
L1JYH6_GUITC2.230e-5252.57Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S0QTD9_9CRYP2.250e-5142.55Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S3GZA9_9STRA2.130e-4847.62Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
R1ENP6_EMIHU2.830e-4841.42Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S4P7Q6_GUITH5.530e-4843.43Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1L872_ALECA1.190e-4647.80Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig199contigP-littoralis_Contig199:365893..372272 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G4N4
Model size3658
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.68e-177
EggNOG OGs2BXY2@1|root,2S2G6@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001820.1
Cds size1830
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig199.65.1prot_P-littoralis_Contig199.65.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig199 366250..370801 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789952.7644074-UTR-P-littoralis_Contig199:365892..3662491680789952.7644074-UTR-P-littoralis_Contig199:365892..366249Pylaiella littoralis U1_48UTRP-littoralis_Contig199 365893..366249 +
1680789952.8470318-UTR-P-littoralis_Contig199:370801..3722721680789952.8470318-UTR-P-littoralis_Contig199:370801..372272Pylaiella littoralis U1_48UTRP-littoralis_Contig199 370802..372272 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789952.7745373-CDS-P-littoralis_Contig199:366249..3673471680789952.7745373-CDS-P-littoralis_Contig199:366249..367347Pylaiella littoralis U1_48CDSP-littoralis_Contig199 366250..367347 +
1680789952.7849107-CDS-P-littoralis_Contig199:367756..3679541680789952.7849107-CDS-P-littoralis_Contig199:367756..367954Pylaiella littoralis U1_48CDSP-littoralis_Contig199 367757..367954 +
1680789952.794453-CDS-P-littoralis_Contig199:368290..3684401680789952.794453-CDS-P-littoralis_Contig199:368290..368440Pylaiella littoralis U1_48CDSP-littoralis_Contig199 368291..368440 +
1680789952.8055515-CDS-P-littoralis_Contig199:368818..3688951680789952.8055515-CDS-P-littoralis_Contig199:368818..368895Pylaiella littoralis U1_48CDSP-littoralis_Contig199 368819..368895 +
1680789952.815073-CDS-P-littoralis_Contig199:369287..3694051680789952.815073-CDS-P-littoralis_Contig199:369287..369405Pylaiella littoralis U1_48CDSP-littoralis_Contig199 369288..369405 +
1680789952.8248725-CDS-P-littoralis_Contig199:370337..3704151680789952.8248725-CDS-P-littoralis_Contig199:370337..370415Pylaiella littoralis U1_48CDSP-littoralis_Contig199 370338..370415 +
1680789952.836135-CDS-P-littoralis_Contig199:370690..3708011680789952.836135-CDS-P-littoralis_Contig199:370690..370801Pylaiella littoralis U1_48CDSP-littoralis_Contig199 370691..370801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig199.65.1

>prot_P-littoralis_Contig199.65.1 ID=prot_P-littoralis_Contig199.65.1|Name=mRNA_P-littoralis_Contig199.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=610bp
MVGGAAGKGKRARGAKAGEHGGASAAAVAATATPAPSTPRPAAVVKAAAT
VANGAGADDSEIRNKGKKSKRKREKYQAQEKGCEGGGVDGLRSCSAPATQ
GNNHATTKDAKRRKSGGHPRAPEIVVVATATAAAAAANTPGVGAAVSSQP
RTHTCTSKVAEYAATCDVTPPVRGAKKKRKLKDKRQKTGGRSSPSRNRHA
PPPFKKTATPIGNNADNGDDDGDDNDDNYESPALEGIFHNGAMYLVDARR
RVFSAQRDGQGNLVEVGTFDDGRGKVVMIGQPPSGGPPDGTTSLAVAVEG
VVPSEGAPDSTGFSGPAGSSSSSSSSNKKTKNKGKKEAEAGVLEEEKEGV
AGTETGNIIDYPFEVEELDHCETSERAYADISPLLLELAAGLGKTPQELV
IYDPYYCQGSTIVRLASLGFPRVHNRKEDFYEVVKNGNIPEHDVVVTNPP
FSGEHVSKILSFCTREGAKPWFLLLPNYVYLKDYYESSLGRRPGRGATLP
FYLTPPKRYTYYSPAGSRLKVKSSERKTSPFNTFWYIRLGDGGVTSKILQ
SYDAVSRKAESDARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRVR
KKKSEWVVG*
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mRNA from alignment at P-littoralis_Contig199:365893..372272+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig199.65.1 ID=mRNA_P-littoralis_Contig199.65.1|Name=mRNA_P-littoralis_Contig199.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6380bp|location=Sequence derived from alignment at P-littoralis_Contig199:365893..372272+ (Pylaiella littoralis U1_48)
GGGATGACCAACAATTATACCCGAACTAGCACGCCTCGCGATCCAGTGGT
GCCCCAAAGACACATTTGGCCTGTGGGCCGGCCGCCGGCCTATGCAGTAT
CTGCAGTATCTATCGCAGCAGGCCACGAGTGTGCGATACCGGCGTTGGCT
ACAATGCTAGAGTATTGAATTTTTGAACTACCTCGAAGGCAAGTTTGATT
GTGATTCCCCTTGCGCACAATCTGCGGCGAAGACCCAGCTTTCGCCGCTG
TTGACATCGGGTTCTCAGCAACTTGCAGCAAGCGGTAAAGTCCCTCCCTG
CCCGCTAGTAGAGTAAACACAGCAGCAGAGGGGGGCACCAGGAGGTAGGC
GCGCATTATGGTAGGTGGAGCTGCTGGGAAAGGGAAACGGGCAAGAGGGG
CGAAAGCAGGCGAACACGGTGGTGCATCAGCTGCAGCCGTAGCGGCGACA
GCAACACCGGCGCCATCGACGCCACGGCCGGCAGCGGTAGTGAAAGCGGC
AGCAACGGTGGCCAACGGTGCTGGTGCGGATGACAGCGAAATTAGAAACA
AAGGGAAGAAGAGCAAACGCAAACGAGAGAAGTACCAGGCTCAAGAAAAG
GGATGCGAAGGGGGTGGCGTCGATGGCCTTCGCAGCTGTAGTGCGCCAGC
AACCCAAGGCAACAACCACGCGACGACGAAAGACGCCAAGAGGCGCAAAA
GTGGGGGGCACCCACGTGCCCCTGAAATCGTAGTCGTTGCTACTGCTACT
GCCGCTGCTGCTGCTGCTAACACGCCTGGTGTTGGTGCTGCAGTTTCGTC
ACAGCCACGCACCCATACTTGCACTTCTAAGGTCGCAGAGTATGCCGCAA
CCTGTGATGTAACACCACCAGTTCGTGGGGCCAAGAAGAAGCGAAAACTC
AAAGACAAGAGGCAGAAAACAGGCGGTCGATCTTCTCCATCCCGCAACAG
GCATGCCCCACCACCCTTTAAGAAGACGGCAACCCCCATAGGAAACAACG
CCGACAACGGCGACGACGACGGCGACGACAACGACGATAACTACGAAAGC
CCAGCGCTAGAAGGAATCTTCCACAACGGTGCGATGTACCTCGTCGACGC
GCGCAGAAGAGTCTTCTCGGCCCAGCGAGACGGGCAAGGAAACCTCGTGG
AGGTGGGAACCTTTGACGACGGCCGCGGCAAGGTGGTGATGATCGGACAA
CCGCCGTCGGGCGGCCCCCCGGACGGGACCACGTCGCTGGCGGTGGCGGT
GGAAGGGGTAGTGCCATCGGAAGGCGCCCCCGATAGCACGGGTTTTTCCG
GTCCAGCCGGCAGCAGCAGCAGCAGCAGCAGCAGCAATAAGAAGACCAAG
AACAAGGGAAAAAAGGAGGCGGAAGCTGGTGTTCTTGAAGAAGAGAAAGA
GGGCGTCGCTGGAACAGAGACCGGAAACATTATCGACTATCCCTTCGAGG
TCGAGGTGGGGTGCAAGAACATTACCCAAAACGCTACACAGCTTATTTTT
CATTTCCCCAGCACCCACGGTACAGACATTTCTCTCGGAGCGGAGGACAC
TTGTCTCCGAAGTTCATCGCCACAGGCAGAATTCCTGTCTTGAAGCGCAT
CTCCCCGCTGGAGTGTGTTTTGTTTCGTCCTTTGCTTGCAAGGTACGGTA
CTGATGCAGAATACTGCACATGTTGCAGGTGGGTATATAGTTTATAGCGC
ACGTTGACCAACAGGTGAGAATAAATGAACGCATGGACTGACGGACTAAC
ATAACCTCTCCCACTTCTTCCGCCCGCCCCGCCATCTTTCCCTATCGAAC
CTTTTAAATCCTGAGATCGATGCTACACTGACTCACACACACGCACACGC
ACACACGCAAACAGGAACTCGACCATTGCGAGACGAGCGAGCGAGCCTAC
GCCGATATTTCGCCGCTTCTATTAGAGCTGGCCGCTGGATTGGGCAAAAC
TCCGCAAGAGCTGGTGATCTACGATCCTTACTACTGCCAAGGGTCCACCA
TCGTAAGGCTGGCATCGCTCGGCTTTCCCAGGGTGCACAATCGAAAGGAA
GATTTTTATGAGGTGGGTAGGTAGGCGGGAAGGGAGTTTAAACCACGCTT
CCTGGTGTAGAACAAATGCAAAAGTGTAGTGAGCATGACTCCCCAGGGTG
CTGATCTTGTCTAAGCCACAAGCATGAATAATGAATACCGCCTGATCGGA
AAATGGTGTGGTGGCGTTTGTGGGTGGGAACGTCCTTCGCCGTCTTCTGC
GCGTGTTGACGCAAAAAATATGTTTTTGCATGGAAGGACCAACGGTGGAA
AAGTGCTTACCATTAGAAAAACCAGAAGCTTTTTGCGTCTTTGAATACTT
CTGTGTTTCTTGCGCGTGTTGGAACTGACTTGCTGGTCTCTGGGCCAGGT
GGTCAAGAACGGAAACATCCCGGAACATGACGTTGTTGTGACGAATCCTC
CCTTCAGCGGAGAACACGTGTCCAAAATCCTCAGCTTCTGCACGCGTGAA
GGGGCGAAGCCCTGGTTTCTCCTGCTGCCGAACTACGTTTATCTCAAGGT
ACACATGCTTCACAACGTCATGCCTCAAAATGGGCCGTAAAAAAACCAGA
GAGGTTGCTCTGTGTGGTGCTGCCTGCCCCTCGATTTTGATGAGAAGTGA
AAATTGGCTGTAGCTACAGGCCACGAGTAAGTTCTTGCGCTTCTGTATTG
TTTCGCTCGGACTCGTGTACCGTAGAATTAGTCGGTCCCCTTTGTGTTTT
GTGCGGAAGAGCCAGTTATGTCTCCTACACAGGTGGGAGGACAAATGATT
TGACCGACCCTTTTCACCAACAGCTGTGATGGGGCGCGCGGTTTCCCCGC
ATTTATCTCTGGCCTGTTTTTCCTCCTTGCGTTAAATTCGCTTCGAATAT
ACGGTACGTATTTTGGTACGCCGCAGGACTACTACGAGTCGTCCTTGGGT
CGCCGGCCTGGACGAGGCGCGACGCTGCCCTTCTACCTCACACCCCCGAA
GAGGTGAGGGAAGAGCACTGACTTCCCGTTGGGCCGTTGGAACTTCGTCG
AACTAAAGTAAATGCGCATTGATCTTGTATGGTAGCGAGTTTCGTACTAC
GTGCGGGAGAGGGAAGACCTCTGTTCTTTTTTGAAGCCCTCGTCGTGTGA
AAGCATCCGCAGAAAGTCACGTTACAACGGGCCGGGTACGAGTACAGCTT
TCTCACGCGCCGGTAAATGAGACAGCATGTGCGTGGTCTTGCCTTGGCTT
GTTCTCGATAAAGATAACCTATGAGCAGCAAACTATTCGCTTGTGTTCGT
TTTCTGGTAAACAAACACATTATCACGTACAACAGCCCTGCAGCTTCTGA
GCAACAAAGTATTATCGTTGTTTTTGTCCTGGTGAACAAACACAGGTACA
CGTACTACAGCCCTGCGGGATCCCGGTTGAAGGTCAAGAGCTCAGAGAGG
AAAACATCTCCTTTCAACACCTTCTGGTACATTCGCCTGGGGGACGGGGG
TGTCACATCCAAGGTAAATTCTTCGAGTAACAAGCTAGGTGTTCTTCGTA
TCTTGCTAGAGTAGCGTTGCAGTATCCTGCGACCACCACGATAATCATTT
TTGAGATATGTGGATGACCACAATATTTTCAAGGTTTTCATCGTATCTTG
CCGGAGTGGCGTTACAGTATCCTGCGACCACCACGGTCATCTTTTTTTGT
ATATGTTAATGACCAGAGTATTTTGTTTTTCTGACGGCTACTGCTGGATA
GCCTACGTGGGATAGAATACGGCGTGTCCGCGCTTCCTTGGTGCGTATGA
CGTGATGCCGATTCTGGGATTTTGCTTGGGGGGGGGGGGCGTTGTTTGTG
CGTGTATGCGGGCGCGGCGCCCACCTTATCGTTGCTCCGGTATTGTTTGG
CATAATGGTATCCCTTTTGTGTGCAAACGCCCCGGCCGACAACCGTACGT
CGGCCGTGCTGATCGCACACCAGGTTTGAGTACTTACACTTACCAAATCT
CCACCGATATTTTGTTTGCCCTCTACCAGTGTATCGCCTGCCCGCCGACG
CACAAACTCGTGGTTTCCTGATCCCCGCTCTCTTTACCGCGCCTTGATTG
GAGCTACAATTCAGACTTCAGTTCTTCCCCCCTTGAGCTCAACCTGCCTG
TCACCAACGCGGCACCCTTTTTTTTGTGTGTCAATCGGTTGAAGGCCGGC
GCTCCTCCGGTGATGACATTGTGACGGGGCCGGAAATCGAGAGTAATAGG
AGTACTGTACTTTACAACAAGTCGAGGGATAACAACCTGGGGCACCGGGC
TTATGCGGGGTAGATCAGGTCGTGAAGTCCTTAGCCAGGGGTTCAAGTAT
CGTGGCGTAGCCCAACGCGCATGTTAACACGCCACTACGCCGCTTTTAGC
TCTCTCGTCGTGCATGCCACGGTTGGTCTGTTCAACGCCACGCAGATCCT
CCAGTCTTACGACGCGGTTTCGCGAAAGGCGGAGAGCGACGCAAGGTGCT
GCGTTGCCAGGACGACCCAGCAGGTACGACGGGCAGCGTAGCGTAACGAT
CGGAGAGACAAGCATGCGATGCACATCACAATAATCTGTACAATTTCTGC
GAGAACGCTCGGGGGTGGCCTAGCAGTACGTCTACAATAACCGATAGACA
CGTAGTAGATGGGTAATTTTCATCTCGACATGTTGGGTGTGAGCCGTACC
CGACGTTACACACGGTTTCTGAAACGACGAATCGCCAAGTGCGCGGCACG
AGTGTCACCCTTTCGCGCCCCCTTCGCTCTTGATATTCTTTTCGCCAGAT
TCCGTACAAGATGATGGACTCGAACGACCCTCGTCGAAAGAAGGCAAGGG
ATCGCCAGCGGAGCATAGATAGGGTCCGCAAGAAGAAGAGCGAGTGGGTC
GTCGGCTAGATGGCTTTCAGCTCATGCTGCCCTTTTTTCCGGTTTTAAGA
GTAAAAAAATCAAATGATGCTTATTTGGCGGGCATGTTACGTGGCTTCTA
TTTTCTCTCTCTCTCTATGATTACGTCTTTTCGTGTTTGTTTGGGTACAC
ATTGCACATCGTGAATTGGCAAGTACATGCCATCGATAACGTAAAGTGCA
GTCTTGTCTTTGCGTCATATTGTGCCTTCCAAGGACCCTAATTTGTAATC
GGAATTACGTGGTCCCTTTTTTGTGTTCCCATGATCGAGGGCGGTGCTTG
AGGTTCCGCATGCTGGCGGGGGGACAGGGAACACACAAAATGGATTTCTG
ATTGGGTTCTACTCGACGAGTCCACGTTTGTTGAATCTAATTTGGTTCGA
TACTCCGGTCTGCCGGCTTGAGTCGGTGATTTTACCTTGTGTATTTTCTA
CCACGGGTCGGACAGCTTTCGTCGCGAGATGCGTTTGTTTCCGAAAGTCT
TCAGCGCATCCCCCTCGCGGGATGTGCCGACTTGTAGCCTGGTACGTTTT
TCGGCGTAGCCTCCGCGCCGCTGCTGCGGGTGCCCTGTGGGACGCAATGT
CGTCTCCTGTTCAACCCCCATAGCCTACAGCCACGTCACCTATCCGGACT
CGGGCTAGCATGTCGTCGTGGTATCCGTGGTAAATTGTGAGCACCCTGTC
CGGCATGCCGGCTCGCGCAAGTACCTTCCTCAGCAGTTCTCGGTCAAACG
AGTCGTAGGTCTTCTTGAGGTGGACGAAGCACGTGAATGGTGGTATTTCC
CTTTGTCGTCCTTGTTTCTGGAGCCGGCGCACTACAATCGGCATGTCGAC
GGTGGATCGCTGGGGTCTGAAGCAGGACTGCTCCTGCGGTATAGTTCCCC
TCGGGCTCCGTAGTAGTCGCTGAGACGGCTGGCCACGATCTTCAGCATCA
CCTTGCCGGCGTGGACTATATTCCGGTACAGACTGGTTAGGAGGGGGTTA
AACTCCTGCTGTATACTGTACGTAGATAGATGCAGACGAAACACTGCTGT
TGTTGTCTGTACACTTGTCGTCGTAGCCAGGAACGAACTATCAGATGATT
CCTGCCAAGGCCGGGGCTTCAGCTAACTTGCGATGAACCCTCGGCGTAAA
CTGTTGTAGTAAGATCCTACGGTGGGTACATACGTGTAATGATGTACCGA
GGACGGAGCGTGGCCGCACGCTCGCTGCTCAGGTGTCTATAAACTTGAAC
ATTGTACAGCAGTTTACCGGGTTTCTTTTGGCGAGGGAAAAAGTAAACTG
CGTCCAATAGTTACAAAGTCTACGCGTCGGGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGAACAACTCCGCAAAGCGGGTCGAAGGCACGCCAAAATTT
TCATTTGGTGTACAATTATATATTTGAATTATGTTGAGCCCCTTCTTTCC
GTAAAGCAGTAATGGTGGGAGGAAGGCCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig199:365893..372272+

>mRNA_P-littoralis_Contig199.65.1 ID=mRNA_P-littoralis_Contig199.65.1|Name=mRNA_P-littoralis_Contig199.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1830bp|location=Sequence derived from alignment at P-littoralis_Contig199:365893..372272+ (Pylaiella littoralis U1_48)
ATGGTAGGTGGAGCTGCTGGGAAAGGGAAACGGGCAAGAGGGGCGAAAGC
AGGCGAACACGGTGGTGCATCAGCTGCAGCCGTAGCGGCGACAGCAACAC
CGGCGCCATCGACGCCACGGCCGGCAGCGGTAGTGAAAGCGGCAGCAACG
GTGGCCAACGGTGCTGGTGCGGATGACAGCGAAATTAGAAACAAAGGGAA
GAAGAGCAAACGCAAACGAGAGAAGTACCAGGCTCAAGAAAAGGGATGCG
AAGGGGGTGGCGTCGATGGCCTTCGCAGCTGTAGTGCGCCAGCAACCCAA
GGCAACAACCACGCGACGACGAAAGACGCCAAGAGGCGCAAAAGTGGGGG
GCACCCACGTGCCCCTGAAATCGTAGTCGTTGCTACTGCTACTGCCGCTG
CTGCTGCTGCTAACACGCCTGGTGTTGGTGCTGCAGTTTCGTCACAGCCA
CGCACCCATACTTGCACTTCTAAGGTCGCAGAGTATGCCGCAACCTGTGA
TGTAACACCACCAGTTCGTGGGGCCAAGAAGAAGCGAAAACTCAAAGACA
AGAGGCAGAAAACAGGCGGTCGATCTTCTCCATCCCGCAACAGGCATGCC
CCACCACCCTTTAAGAAGACGGCAACCCCCATAGGAAACAACGCCGACAA
CGGCGACGACGACGGCGACGACAACGACGATAACTACGAAAGCCCAGCGC
TAGAAGGAATCTTCCACAACGGTGCGATGTACCTCGTCGACGCGCGCAGA
AGAGTCTTCTCGGCCCAGCGAGACGGGCAAGGAAACCTCGTGGAGGTGGG
AACCTTTGACGACGGCCGCGGCAAGGTGGTGATGATCGGACAACCGCCGT
CGGGCGGCCCCCCGGACGGGACCACGTCGCTGGCGGTGGCGGTGGAAGGG
GTAGTGCCATCGGAAGGCGCCCCCGATAGCACGGGTTTTTCCGGTCCAGC
CGGCAGCAGCAGCAGCAGCAGCAGCAGCAATAAGAAGACCAAGAACAAGG
GAAAAAAGGAGGCGGAAGCTGGTGTTCTTGAAGAAGAGAAAGAGGGCGTC
GCTGGAACAGAGACCGGAAACATTATCGACTATCCCTTCGAGGTCGAGGA
ACTCGACCATTGCGAGACGAGCGAGCGAGCCTACGCCGATATTTCGCCGC
TTCTATTAGAGCTGGCCGCTGGATTGGGCAAAACTCCGCAAGAGCTGGTG
ATCTACGATCCTTACTACTGCCAAGGGTCCACCATCGTAAGGCTGGCATC
GCTCGGCTTTCCCAGGGTGCACAATCGAAAGGAAGATTTTTATGAGGTGG
TCAAGAACGGAAACATCCCGGAACATGACGTTGTTGTGACGAATCCTCCC
TTCAGCGGAGAACACGTGTCCAAAATCCTCAGCTTCTGCACGCGTGAAGG
GGCGAAGCCCTGGTTTCTCCTGCTGCCGAACTACGTTTATCTCAAGGACT
ACTACGAGTCGTCCTTGGGTCGCCGGCCTGGACGAGGCGCGACGCTGCCC
TTCTACCTCACACCCCCGAAGAGGTACACGTACTACAGCCCTGCGGGATC
CCGGTTGAAGGTCAAGAGCTCAGAGAGGAAAACATCTCCTTTCAACACCT
TCTGGTACATTCGCCTGGGGGACGGGGGTGTCACATCCAAGATCCTCCAG
TCTTACGACGCGGTTTCGCGAAAGGCGGAGAGCGACGCAAGGTGCTGCGT
TGCCAGGACGACCCAGCAGATTCCGTACAAGATGATGGACTCGAACGACC
CTCGTCGAAAGAAGGCAAGGGATCGCCAGCGGAGCATAGATAGGGTCCGC
AAGAAGAAGAGCGAGTGGGTCGTCGGCTAG
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