mRNA_P-littoralis_Contig199.54.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig199.54.4
Unique NamemRNA_P-littoralis_Contig199.54.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A6H5KD68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD68_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 2.090e-145
Identity = 314/529 (59.36%), Postives = 350/529 (66.16%), Query Frame = 1 
Query:    1 MGKDSATPGMLLRIDHTKSKVVYNALRRLEWQTNREVDKAVRNLMASSNKGGVDSTQFKAKKTAFRESQKLEGGQAVKAVIAGWKCSTYQYLGSMQMKTTRKGGNVVQYVPKERYFDNRAEKSLLAKAKEAIAREEAAT--------------KNSGASMFQKPFWKNNPDLNEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDFVIPSEYKRSRRMSKEGYIAGVGSGAGGAFGETSQAGTVVDSEEXXXXXXXXXXXGVEGFVDEVDEGELSERELLRRRAASRTGFDDDXXXXXXXXXMDVSDDGTP-SHSPQV---------SNAELSAPRSPVTR--TPSSPPELLFA----------QGLTSTSRERERDRGREDASRRSS-RHXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSTARRGRASEGSNVSASRRRSKSRSGRFVSQLKGIVKGKGPSSSSRRGSAT 1476
            MGKDS TPG+LLR+DHTKSKV YNALRRLEWQTNREVDKAV NLMASS+KGGVDSTQFKAKKT FRESQKL+GGQ V+AV+AGWKCSTYQYLGSMQMKTTRKG NVVQYVPK+ YFD+R EK LLAKAKEAIAREEAAT              K  G+SMFQKPFWKNNPDLNE KV RQINKQVKATVWMA DYPLKL+HIMPALEI+SVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDG+D  +FVIPS+Y+RSRRMSKE Y+AGV   AGG           +D          XXXX        V E  +SER                XXXXXXXXX D+SD+GT  + SP+          +N E+S P+SP+ R   P  P   + A          QG    +   +  RGRED S++S  R                               TA R     G   +  R+RSKSRSGR VSQLKGIV G G   S+RRG ++
Sbjct: 1205 MGKDSPTPGVLLRVDHTKSKV-YNALRRLEWQTNREVDKAVNNLMASSHKGGVDSTQFKAKKTVFRESQKLDGGQQVQAVMAGWKCSTYQYLGSMQMKTTRKGANVVQYVPKDMYFDSRGEKPLLAKAKEAIAREEAATAAGAGXXXVAGGLRKGVGSSMFQKPFWKNNPDLNEDKVHRQINKQVKATVWMAHDYPLKLRHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYQRSRRMSKEKYVAGVR--AGGEXXXXXXXRQNMDRGVSGNFESDXXXXXXXXVF--VTEAGVSERXXXXXXXXXXXXXXXXXXXXXXXXXGDMSDEGTTLASSPRRRSSLTNGSGTNGEMSDPQSPLARGQPPGQPQASVSARTAPASGGGLQGYQPAAPSSD-GRGREDLSQKSQQRQQHAQPPRGRSMSRDSPERRGGPASGTEGGGTAERHVGGAGEAPAHQRQRSKSRSGRLVSQLKGIV-GAGKGKSARRGGSS 1726
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: D7FKT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT2_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 7.030e-126
Identity = 278/514 (54.09%), Postives = 306/514 (59.53%), Query Frame = 1 
Query:    1 MGKDSATPGMLLRIDHTKSKVVYNALRRLEWQTNREVDKAVRNLMASSNKGGVDSTQFKAKKTAFRESQKLEGGQAVKAVIAGWKCSTYQYLGSMQMKTTRKGGNVVQYVPKERYFDNRAEKSLLAKAKEAIAREEAATKNSGASMFQKPFWKNNPDLNEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDFVIPSEYKRSRRMSKEGYIAGVGSGAGGAFGETSQAGTVVDSEEXXXXXXXXXXXGVEGFVDEVDEGELSERELLRRRAASRTGFDDDXXXXXXXXXMDVSDD------------GTPSHSPQVSNAELSAPRSPVTR-TPSSPPELLFA-----------QGLTSTSRERERDRGREDASRRSS-RHXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSTARRGRASEGSNVSASRRRSKSRSGRFVSQLKGIVKGKGPSSSSRRG 1467
            MGKDS TPG+LLRIDHTKSKV YNALRRLEWQTNREVDKAV NLMASSNKGGVDSTQFKAKKT FRESQKL+GGQ V+AV+AGWKCSTYQYLGSMQMK                                            G+SMFQKPFWKNNPDLNE KV RQINKQVKATVWMA DYPLKLKHIMPALEI+SVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDG+D  +FVIPS+Y RSRRMSKE YIAGVG+G  G          +          XXXXXX   G    V E  +SEREL              XXXXXXXXX                     + +   +N E+S P+SP+ R  P+S  + L +           QG    +   +  RGRED S+RS  R                                A R     G   +  R+RSKSRSGR VSQL+GIV G G   S+RRG
Sbjct:    1 MGKDSPTPGVLLRIDHTKSKV-YNALRRLEWQTNREVDKAVNNLMASSNKGGVDSTQFKAKKTVFRESQKLDGGQQVQAVMAGWKCSTYQYLGSMQMKGV------------------------------------------GSSMFQKPFWKNNPDLNEDKVHRQINKQVKATVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYHRSRRMSKEKYIAGVGTGGEGXXXXXXXRQNMDRGASGNFESXXXXXXXXXGVF--VTEAGVSERELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRKSLTNGNGSGTNGEMSDPQSPLARGQPTSQAQALVSGRTAPASGGGLQGYQPAAPSSD-GRGREDPSQRSQQRQQAHAQPRGRSMSSDSPERRGGPASGTAGGGAAERHVGGXGEAPAHKRQRSKSRSGRLVSQLRGIV-GAGKGKSARRG 467
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: UPI000644BE56 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BE56)

HSP 1 Score: 78.2 bits (191), Expect = 9.230e-12
Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1 
Query:  472 LNEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDFVIPSEYKRSRRMSK 792
            L EG+     +K  + TVW++Q++P K+  I+P  E++S    +  RL   +SL   P +GFPVK  +P++ T+ A VTF N+    VDK  F +PS++ +++++ K
Sbjct:  346 LCEGESVNVKHKNFEGTVWISQEFPRKITDILPIFEVLSPTHKLFGRLSDFISLK-FPSDGFPVKFDIPVLPTITATVTFNNYVEKEVDKCQFELPSDFVKTKQLLK 451
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A6A7GBU3_9CRUS (Ankyrin repeat domain-containing protein 13A (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GBU3_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 5.800e-10
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1 
Query:  514 KATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDFVIPSEYKRSRRMS 789
            KA+VWM+QD+P  + HI+P LEII+  +  AA+L+S + +  IP  GFPV+V +PL   + A  TF+NF    +  + F +P  +K  +  S
Sbjct:  258 KASVWMSQDFPFSVDHIIPILEIIAPSNPHAAKLKSFIEME-IPS-GFPVQVEIPLFHLLNATATFQNFEHREISSKIFQLPKSHKHVKFRS 347
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A1R2APQ5_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2APQ5_9CILI)

HSP 1 Score: 69.3 bits (168), Expect = 8.250e-9
Identity = 31/90 (34.44%), Postives = 57/90 (63.33%), Query Frame = 1 
Query:  484 KVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQE-GFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDF 750
            K+++  NK +KA +W A+D+P+K+  +MP L++++     A R    LS   +    GFP+K  +PLM+TV A+V F+  +++G++  +F
Sbjct:  369 KLEKNSNKHIKANLWCAEDFPIKIADLMPLLDLLASVSQKAKRFHEFLSSNQMFYNIGFPLKAKIPLMLTVTALVAFKELKTEGIEDSEF 458
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A1R2BVI1_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BVI1_9CILI)

HSP 1 Score: 67.4 bits (163), Expect = 3.550e-8
Identity = 30/90 (33.33%), Postives = 56/90 (62.22%), Query Frame = 1 
Query:  484 KVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQE-GFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDF 750
            K+++  NK +KA +W A+++P+K+  +MP L++++     A R    LS   +    GFP+K  +PLM+TV A++ F+  R +G++  +F
Sbjct:  414 KLEKNTNKHIKANLWCAENFPIKITDLMPLLDLLASVSQKAKRFHEFLSSNQMFYNIGFPLKAKIPLMLTVTALIAFKELRIEGIEDSEF 503
[Close]
BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A1S2XWF0_CICAR (ankyrin repeat domain-containing protein 13C n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XWF0_CICAR)

HSP 1 Score: 67.4 bits (163), Expect = 3.740e-8
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 1 
Query:  475 NEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 720
            NE K + +  K V+  +W+ QD+PLK   ++P L+I++ +     RLR +L+   +PQ  FPVKV++P++ T++ +VTF  F
Sbjct:  465 NESKSESEFKKGVRPVLWLTQDFPLKTDELLPVLDILANKVKAIRRLRELLTTK-LPQGTFPVKVAIPIVPTIRVIVTFTKF 545
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BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A2K3N2X3_TRIPR (Ankyrin repeat domain-containing protein 13B-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N2X3_TRIPR)

HSP 1 Score: 66.2 bits (160), Expect = 4.950e-8
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 1 
Query:  475 NEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF 720
            NE K + +  + V+  +W+ QD+PLK   ++P L+I++ +     RLR +L+   +PQ  FPVKV++P++ TV+ +VTF  F
Sbjct:  193 NESKSESEFKRGVRPVLWLTQDFPLKTDELLPLLDILANKVKAIRRLRELLTTK-LPQGTFPVKVAIPIVPTVRVIVTFTKF 273
[Close]
BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: A0A8J9RAV6_9CHLO (Ankyrin repeat domain-containing protein 13B n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAV6_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 5.890e-8
Identity = 71/262 (27.10%), Postives = 113/262 (43.13%), Query Frame = 1 
Query:   19 TPGMLLRIDHTKSKVVYNALRRLEWQTNREVDKAVRNLMASSNKGGVDSTQFKAKKTAFRESQKLEGGQAVKAVIAGWKCSTYQYLGSMQMKTTRKGGNVVQYVPKERYFDNRAEKSLLAKAKEAIARE---EAATKNSGASMFQKPFWKNNPDLNEGKVQRQINKQVKATV---WMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRS---DGVDKRD--FVIPSEYK 771
            TP  LL +DH K  VV   L R + +   ++D  V  +M       +  T+ KA +  F+  +   GG   +  I GWK   Y+  G M+  T  K    +Q        D   E  L  + +E   RE   +  T    A   ++    +N             K V+      WMA+++P+ L+ ++P L+I+   +   AR    L   G   + FPVK+ VPL+ TV A+++F NF +   +G   +D  F  P  Y+
Sbjct:  288 TPASLLLVDHLKRSVV--DLTREKKKHKPDLDDQVSLIMTDR----LGKTKMKASEFRFKPVKTWFGGDQTEK-IEGWKTFVYEAAGKMKAVTITKAPISLQE-------DATFEDYLAMEPEEDSVRETYIDPMTLRGPAGAHEEDIHDSNGSEASKAALEAAAKGVRTYTGRCWMAENFPMSLRQLLPILDIVGTANKHLARAGKFLQKYG-NMDLFPVKIQVPLLWTVYALLSFRNFHALPTEGEPAQDSFFQAPEGYR 534
[Close]
BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Match: F4Q3Y2_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q3Y2_CAVFA)

HSP 1 Score: 65.9 bits (159), Expect = 9.480e-8
Identity = 29/95 (30.53%), Postives = 57/95 (60.00%), Query Frame = 1 
Query:  502 NKQVKATVWMAQDYPLKLKHIMPALEIISVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDFVIPSEYKRSRRM 786
            +K  +  VW++ ++P K+  ++P  E+++  + + +RL   +SL   P EGFPVK+  P++ T+ A VTF N+    +D + F IP ++ + + +
Sbjct:  418 HKNFQGCVWISNEFPRKITDLLPIFEVLTPTNKLFSRLSEFISLK-FPMEGFPVKLDFPVVPTITATVTFNNYIEKEIDPQHFEIPVDFIKKKDL 511
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig199.54.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD68_9PHAE2.090e-14559.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKT2_ECTSI7.030e-12654.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000644BE569.230e-1235.51hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6A7GBU3_9CRUS5.800e-1040.22Ankyrin repeat domain-containing protein 13A (Frag... [more]
A0A1R2APQ5_9CILI8.250e-934.44Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1R2BVI1_9CILI3.550e-833.33Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1S2XWF0_CICAR3.740e-837.80ankyrin repeat domain-containing protein 13C n=1 T... [more]
A0A2K3N2X3_TRIPR4.950e-837.80Ankyrin repeat domain-containing protein 13B-like ... [more]
A0A8J9RAV6_9CHLO5.890e-827.10Ankyrin repeat domain-containing protein 13B n=1 T... [more]
F4Q3Y2_CAVFA9.480e-830.53Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig199contigP-littoralis_Contig199:309189..315141 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKT2
PFAMsAnk_5,GPCR_chapero_1
Model size1547
Max annot lvl2759|Eukaryota
KEGG koko:K21437
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006621,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0010941,GO:0012505,GO:0019222,GO:0031323,GO:0032507,GO:0033036,GO:0033365,GO:0034613,GO:0035437,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0048471,GO:0050789,GO:0050794,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0072595,GO:2000209
Exons8
Evalue1.15e-126
EggNOG OGsKOG0522@1|root,KOG0522@2759|Eukaryota
Descriptionprotein retention in ER lumen
Cds size1545
COG categoryO
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig199.54.4prot_P-littoralis_Contig199.54.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig199 309189..315141 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789952.416104-CDS-P-littoralis_Contig199:309188..3095871680789952.416104-CDS-P-littoralis_Contig199:309188..309587Pylaiella littoralis U1_48CDSP-littoralis_Contig199 309189..309587 -
1680789952.4285626-CDS-P-littoralis_Contig199:310542..3106741680789952.4285626-CDS-P-littoralis_Contig199:310542..310674Pylaiella littoralis U1_48CDSP-littoralis_Contig199 310543..310674 -
1680789952.4371052-CDS-P-littoralis_Contig199:311145..3114931680789952.4371052-CDS-P-littoralis_Contig199:311145..311493Pylaiella littoralis U1_48CDSP-littoralis_Contig199 311146..311493 -
1680789952.4474494-CDS-P-littoralis_Contig199:312146..3122181680789952.4474494-CDS-P-littoralis_Contig199:312146..312218Pylaiella littoralis U1_48CDSP-littoralis_Contig199 312147..312218 -
1680789952.4558198-CDS-P-littoralis_Contig199:312467..3125751680789952.4558198-CDS-P-littoralis_Contig199:312467..312575Pylaiella littoralis U1_48CDSP-littoralis_Contig199 312468..312575 -
1680789952.4640896-CDS-P-littoralis_Contig199:313045..3132371680789952.4640896-CDS-P-littoralis_Contig199:313045..313237Pylaiella littoralis U1_48CDSP-littoralis_Contig199 313046..313237 -
1680789952.4801822-CDS-P-littoralis_Contig199:314338..3145691680789952.4801822-CDS-P-littoralis_Contig199:314338..314569Pylaiella littoralis U1_48CDSP-littoralis_Contig199 314339..314569 -
1680789952.4895687-CDS-P-littoralis_Contig199:315078..3151411680789952.4895687-CDS-P-littoralis_Contig199:315078..315141Pylaiella littoralis U1_48CDSP-littoralis_Contig199 315079..315141 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig199.54.4

>prot_P-littoralis_Contig199.54.4 ID=prot_P-littoralis_Contig199.54.4|Name=mRNA_P-littoralis_Contig199.54.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=515bp
MGKDSATPGMLLRIDHTKSKVVYNALRRLEWQTNREVDKAVRNLMASSNK
GGVDSTQFKAKKTAFRESQKLEGGQAVKAVIAGWKCSTYQYLGSMQMKTT
RKGGNVVQYVPKERYFDNRAEKSLLAKAKEAIAREEAATKNSGASMFQKP
FWKNNPDLNEGKVQRQINKQVKATVWMAQDYPLKLKHIMPALEIISVRDD
MAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGVDKRDF
VIPSEYKRSRRMSKEGYIAGVGSGAGGAFGETSQAGTVVDSEEEEEEEEE
EDEDGVEGFVDEVDEGELSERELLRRRAASRTGFDDDEDSDSDSEDMDVS
DDGTPSHSPQVSNAELSAPRSPVTRTPSSPPELLFAQGLTSTSRERERDR
GREDASRRSSRHSRGRSTGSGGSGGIVGGSGGGGGGEGSSTSTARRGRAS
EGSNVSASRRRSKSRSGRFVSQLKGIVKGKGPSSSSRRGSATREGDSRSD
DGDDYEGYDFDDEDD
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mRNA from alignment at P-littoralis_Contig199:309189..315141-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig199.54.4 ID=mRNA_P-littoralis_Contig199.54.4|Name=mRNA_P-littoralis_Contig199.54.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5953bp|location=Sequence derived from alignment at P-littoralis_Contig199:309189..315141- (Pylaiella littoralis U1_48)
ATGGGGAAGGACTCCGCTACCCCGGGAATGCTCTTAAGGATCGACCACAC
CAAGTCCAAGGTAGTGCTGCGGGCGCTGTTGGCGTGTTGGCACGTTGGCA
TCGGCGGGGGCTTGTTGTATTTTCTACTGTTTCAGGTTTTGGTTCTTCTG
CCGGTGGTGATGGTAATGGTGATAGTGGTGGTGGTAGGTGTTGCTGCTGC
TGCTGCTGCTGCTGCTACTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGGGTTGTGGTTGGTTGGTTGGTTGGTGGTGGTG
GTGTTGTTGCTGTCAGCAAGGAGTGTTGATATCTCTGTTGTTGTCAGCGC
AGTTTGGTACGATGTGTTTTTTTTTGTTTTTTTTTGTCGGTAGAACTTTC
ACGTGCTGTCTACGTTTCGTTTTGTGTTGCCGTATTATTTCTTGTCCGAG
AAGGCGTAAAGATTCTCAAACGAAAACCGATACGCCAACCAACACCCCCC
CGCCCGGTTTATTATTTTCCGCCCCTCCACTATCCCTCATCCCCTGTCCA
CCACCGCCGTACATACGCACAGGTTTACAACGCCCTGCGTCGACTGGAGT
GGCAGACCAATCGAGAGGTGGACAAGGCCGTCCGCAACCTCATGGCCTCA
TCGAACAAGGGGGGCGTCGACAGCACCCAGTTCAAGGCCAAGAAAACGGC
GTTCCGTGAATCGCAGAAGTTGGAGGGGGGGCAGGCGGTGAAGGCGGTCA
TAGCGGGCTGGAAGTGCTCAACGTACCAGTACCTCGGCAGCATGCAGATG
AAGGTGTGTAGCGTGTGCGTGTGTGCGTGTGCGAATTTGTGTGTGTAATA
TTACAAGAGGCGTGGTGTGTGCGTGTGCGTGTGCGTGTAGGTGTGCATGC
AAACAAGCCTCAAGCGAGCCGGCTGCCCCATTGGTCCAGTGGGTATTCCT
CTTCTTGACGACAAGGTTGCTGAGTTCGAATCTCGGTGGGCTGTTTTCTC
TTCTCACGCAATGCCTAGCGGTGGGGAGCGAATTTTCGCGTGAAGGAAAA
TTTGACTCGAAGGTCGACGAGCCAAAGAGACGGTCGAAGCGTTCTCGCGG
CGATGTGGAAGATTGAGGCAGGCACAGCAAACGAAGCCGTAAAAAGATAG
ACGAAGAATAAAGATATACTTCAAGTATCCTGCGTTGACCTTCATCCTGT
AGGACCCCCGCCAGATTCGCTCAACTTAAATACCAAGAGGTGTAGACTGG
AGCCCGGAATAGGTGGAATAGCAATACACATGCACTTCGAAACAACGGAG
GGGAATGCGTGTGCTCCGGCAACAAAGTAGGCCCACTGCGGTTTCTCGAT
CATTCGTATGCCCGCACTTTTCTGTCCCTCGTGATTGGTGCCTCTCGTTT
CTATGACGCGCCATGATGTGTGTTTTGCTCCCAAACTATGAATGTTGACA
GACCGCACGAATGACTCCTGTTGTGGTTCGAGAGTTTGTTTGACTTGTCT
ACCCTGTTGTTCGGGGTACCTGTCTTCATTGCTATCGCAAGACGGGTCAG
GGTTGTCTGGACCGGTCCGGCCGGCCCGTCCGCTCATCGATTTTTTTTTT
TTCCGGGTTGAGTTTCGTTTGGTCGCGAAAGTTTCCCCGGGCAAACCAAT
CAGGTTGTCAGTATGCTTCGAGGTTGGCTCCAGAACGAACGAATTACCCA
GACGACCGGCCTTACCATGGTACTCGAAGAATATGATGAATACATGATTA
CTCCGGAGTACGGAGCAGATCACATGCATCAACCAATCCCCTGTTGCATT
TGTTGCTTTGTTTCCCGTCTGTCTGCCTGTCTGTCTGTCTGTCTGTTTAT
CTGTCTCTCAATCTGTCTGTTCGTTGCCACAAAAAAAAAATGAAAACCGA
ACAGACGACGCGAAAGGGGGGCAACGTCGTGCAGTACGTCCCCAAGGAGC
GGTACTTCGACAACCGCGCGGAAAAGTCCCTGCTGGCGAAGGCGAAGGAG
GCCATTGCACGGGAAGAGGCCGCCACCAAGAACTCCGGAGCGAGCATGTT
CCAGAAGCCGTTCTGGAAGAACAATCCGGATCTCAACGAGGGCAAGGTCA
GTAGGTCATCGGTGGCCTTTTTTGGTAGGTGTTGTTGTTGTTTGTGTTGG
TGGTGTTGTCGTTGTTCGTACGAGCACGTATGTTTTTTTTTTTTTCGCTG
TTGCGTCGGTCGTAGATCACGGTTGTTGCGTAGGTCGTAGATCACGGTTG
TTGCGTAGATCGTAGATCACGGTTGTTGCGTAGATCGTAGATCACGGTTG
TTGCGTAGATCGTAGATCACGGTTGTATAGATCGTAGACCACGGTCTCGT
ATATCGTACGTAGATCATGCGGGATTTCAGCGAGCGTCGAAGGATCGCGG
GTCGTGCGTTGCAGGTATGGCGGGACTTTAGTGTTTGTGTTCACTTGGAC
CTTTGATACGAAACAAATCTTCACGGGTATATTGCAATTTTTGGCCCTTT
GTTGCTTTCTTTCGAGCCGTCCGCCTCACGTGCGTGCTGTGTGCTCTCGT
TATGATCTGGACACAGGTGCAACGGCAGATCAACAAGCAGGTCAAGGCCA
CCGTGTGGATGGCGCAGGACTACCCTCTCAAGCTCAAGCACATAATGCCG
GCGCTAGAGATCATCTCCGTCAGGGTGAGTGAGATACAGCTGTTGCAACC
TGTGCTAGTCGTTGTTTTTCGCTCTGGCACCGGAGCTTCACAGCAGTGCA
GTATTGTGTCCACCTACATGCCCCCCCATCCGCGCCTTCCTTTCTTTCTC
TGCGGACCGTGTATCCCCCTTTCATTGCCTAAAGTTCTCAACCTGCCGAA
CCGATGCCCGCCTTGGCGTGTGCGTGTGCGTGTGTGTATGTGTGTTTGTT
GCTTTCATTTTTTTTTCCTGCAGGACGATATGGCCGCAAGACTTCGCTCT
GTGCTCTCACTGGCCGGCATTCCTCAAGAGGGCTTCCCCGTCAAGGTATG
TGTGTGGGGTCAACGTGGCGTTACGATCCATCGCGGTACTTGGACAAGCA
AAGTACTCCTATCCATGGATTGGGTGTAAATGTGCGCGTCCTCTAGAGGA
GGAGAGTCGGCTCTGAACTAAACCTTGTGGTATGTCTCCCACTCATGCGC
GTTTCTCTCTCTCAGCGGGTTCTCTTCGAATGCAGACGTGTGGAGTCTGT
ACTATCTGCGCCCCCGTTGCTGTGCTCTCCCCCTAGTGGTATTCCTGTAA
CACCTTCGCGTGTTATTTTTCTCAACCCTCCCTTCATAAGCGGTTCTTTC
TTAACCCCCTCGCCCTTCGTCTCCGCCACTGTCGTGATGCTTGTGTGCAG
CAAACGCCTCCTTGTATTTTACGCTCAATCTTACACCCATCCGTGTCCGT
TTATCTCGTCTGACTACCCCCCCCCCCCCCCCCCCCCCCTATCGTCGTTG
TTGTTGTTACTTGTGTCAGCGTTCAAGCGAAAGCATTGCGGACAACGTTT
TCAATCTTTCAGTGCCGCCGGTTTGCAATAACACCCCCTATTTTTTTTCG
TTTCTTAACATTACACCATCACAGCGTTTCTCATCCCTTAGCCCCCCCCT
CGTGTCGTGATGCATAACGACGACGACCTGCCAAAAACAAAACTACAGGT
TTCGGTGCCGCTGATGATGACGGTGAAAGCGGTGGTGACCTTCGAAAACT
TTCGATCCGACGGTGTCGACAAGAGAGACTTCGTCATCCCCTCCGAGTAC
AAGCGGTCCCGCCGAATGTCCAAGGAGGGGTACATCGCCGGTGTGGGCTC
TGGCGCTGGCGGCGCTTTCGGGGAGACGAGCCAAGCTGGAACCGTTGTAG
ACTCAGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGATGAGGATGGGGTG
GAAGGGTTTGTTGATGAGGTTGACGAGGGGGAGCTTAGCGAGAGGGAGCT
GCTGAGGAGACGAGCTGCCTCGAGAACTGGTTTTGACGATGACGAGGTAT
GTACGGTTTTAGTTATTGTTTGTATTTCGTTTGTGTGTGTGCTATGTGTG
TTTATTCGCGTGTTTATTCGTGTATCTATTATGTGTTGGGAAGGGAGCTT
GATGTCATTTTGGTTGTCGTGGGGTTCTCGTTTTTCCGTGTGATGTCGGT
TGTGGCGGCGGCGGCGGCAGTGGTGGTGGTGGTGGTGTAGGAGCTTGATG
GTGTAGTTCAGACTCATCTTGACTTGTAGTTTTGTGTGAGAAGAATGAGG
AGGAGTTTTTTTCATGGAGTAGGGTCGTGTTTACTGTCTACCCGGCTTCG
CCCTGAAGCATTTGGAAGCCCACAGCTCTCGTATTCCCAACAGATTTACT
GTATATGCACAGGAGCGTCTTTGTGTTGTCGGCTACCCCAACCAAAAGTG
TGTGTGTCTTGCTTGTGTTGTATCTGCGTGTTTTCACACCTACTCGGCCC
TCTTTTTTTTGGGGCAGGACTCCGACTCCGACTCGGAGGACATGGACGTG
AGCGACGATGGCACTCCGTCGCATTCGCCCCAGGTCAGCAACGCCGAATT
GTCGGCGCCACGATCTCCGGTAACAAGAACACCGTCGAGTCCACCCGAGG
TGCGACAAGCCTTGGTTGACTGACTTTACCGGCAGTATTTTTTGTATTTT
TGGAAAGACAGCAGAGCAACGCCCCCCGCCCTCCCCCACCCTCGGCCCCG
CCGGCCCATTAAGTTAGTCCGGCGGAGCGGGTTGGGGGCGGCTCTCGACA
CGTTCGTTCTACGGGTCGTGCCCAGCCACAAGGTTTGTGAGTCGAAAGTG
GCATCTAAAACCGTGTCGATTGGTTGGATGAGAGCGTGCGAAAAAAAAAA
AAAGCTTCGATTTTTTCCCCCGCCGCGTGTCCTGAGTCGATTTTTCGTCA
GCCTGTCTGGTTTCCCCTCCAAAGCCACCCGAACCCGCCCTGCTCCTTAC
CGAAACGGTTTCATGAATTGAGAAGCAGTGTGCGTGGGCGTGACAGCTTC
TCGAGTAACTGCGTTGAGCCGTGTGCGTTGCTATTTGGTGGCGTATACCG
TAGCTGCGGTGCTGCTGCTGCAGAAGTGCCGGAGTTCCGCCAGCACGACG
ACCACGGAGCACCTCTCATCATCATTTTTCACAAAAAAAATCATCCACAA
ATACGCGCCTCCGACAACATAGCTGTGCGAATAGTTTACGTGCTGCGGTA
AACCCAGCAGCTATGGATAGATGCTATTGACCTCATCAGTGGAAGCCCCT
GATCGTGACGATGCGTGCTGAACCGGTACCATAGTGTTGCAAATGTGGCC
ATTATCTCGGCCACACACAGACACCAAACACCTCGGAAATGTATCATATT
AAAAAAAGGCACCCACCCACCCCGCCTCAGTTTGTTTTACTGGTTTTTTT
TTCAATCGCGCATGCACTCACGCCTGCTGGCCATCACGACCAAAGTCGGT
ATGAAATCGAGTCCGAACGAACCGAAGGAGTCCGACAACAATGTTACACT
TCGCTGCGCTCGTGGACGACTGCTCTCCTCAACAAAACAACTAACCCTTC
ACAGCTCTTGTTCGCGCAGGGCTTGACCTCAACCTCGAGGGAGAGGGAGA
GAGATAGGGGGCGAGAGGACGCTTCGCGGAGATCTTCCAGGCATTCTCGC
GGGCGCTCCACGGGGTCGGGCGGCTCTGGCGGGATTGTCGGTGGAAGTGG
AGGTGGAGGCGGAGGCGAAGGCAGCAGCACCAGCACGGCCCGGCGGGGCA
GGGCTTCGGAAGGGTCGAACGTTTCGGCCTCGCGGCGCCGGAGCAAGTCT
CGGAGCGGGAGGTTCGTGTCCCAGCTCAAGGGGATCGTGAAGGGCAAGGG
TCCTTCTTCTTCCTCTAGGAGAGGGTCCGCCACGCGGGAGGGCGACTCGC
GCAGCGACGACGGCGACGACTACGAAGGCTACGACTTCGACGACGAGGAT
GAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig199:309189..315141-

>mRNA_P-littoralis_Contig199.54.4 ID=mRNA_P-littoralis_Contig199.54.4|Name=mRNA_P-littoralis_Contig199.54.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1545bp|location=Sequence derived from alignment at P-littoralis_Contig199:309189..315141- (Pylaiella littoralis U1_48)
ATGGGGAAGGACTCCGCTACCCCGGGAATGCTCTTAAGGATCGACCACAC
CAAGTCCAAGGTAGTTTACAACGCCCTGCGTCGACTGGAGTGGCAGACCA
ATCGAGAGGTGGACAAGGCCGTCCGCAACCTCATGGCCTCATCGAACAAG
GGGGGCGTCGACAGCACCCAGTTCAAGGCCAAGAAAACGGCGTTCCGTGA
ATCGCAGAAGTTGGAGGGGGGGCAGGCGGTGAAGGCGGTCATAGCGGGCT
GGAAGTGCTCAACGTACCAGTACCTCGGCAGCATGCAGATGAAGACGACG
CGAAAGGGGGGCAACGTCGTGCAGTACGTCCCCAAGGAGCGGTACTTCGA
CAACCGCGCGGAAAAGTCCCTGCTGGCGAAGGCGAAGGAGGCCATTGCAC
GGGAAGAGGCCGCCACCAAGAACTCCGGAGCGAGCATGTTCCAGAAGCCG
TTCTGGAAGAACAATCCGGATCTCAACGAGGGCAAGGTGCAACGGCAGAT
CAACAAGCAGGTCAAGGCCACCGTGTGGATGGCGCAGGACTACCCTCTCA
AGCTCAAGCACATAATGCCGGCGCTAGAGATCATCTCCGTCAGGGACGAT
ATGGCCGCAAGACTTCGCTCTGTGCTCTCACTGGCCGGCATTCCTCAAGA
GGGCTTCCCCGTCAAGGTTTCGGTGCCGCTGATGATGACGGTGAAAGCGG
TGGTGACCTTCGAAAACTTTCGATCCGACGGTGTCGACAAGAGAGACTTC
GTCATCCCCTCCGAGTACAAGCGGTCCCGCCGAATGTCCAAGGAGGGGTA
CATCGCCGGTGTGGGCTCTGGCGCTGGCGGCGCTTTCGGGGAGACGAGCC
AAGCTGGAACCGTTGTAGACTCAGAAGAAGAGGAGGAGGAAGAGGAAGAG
GAGGATGAGGATGGGGTGGAAGGGTTTGTTGATGAGGTTGACGAGGGGGA
GCTTAGCGAGAGGGAGCTGCTGAGGAGACGAGCTGCCTCGAGAACTGGTT
TTGACGATGACGAGGACTCCGACTCCGACTCGGAGGACATGGACGTGAGC
GACGATGGCACTCCGTCGCATTCGCCCCAGGTCAGCAACGCCGAATTGTC
GGCGCCACGATCTCCGGTAACAAGAACACCGTCGAGTCCACCCGAGCTCT
TGTTCGCGCAGGGCTTGACCTCAACCTCGAGGGAGAGGGAGAGAGATAGG
GGGCGAGAGGACGCTTCGCGGAGATCTTCCAGGCATTCTCGCGGGCGCTC
CACGGGGTCGGGCGGCTCTGGCGGGATTGTCGGTGGAAGTGGAGGTGGAG
GCGGAGGCGAAGGCAGCAGCACCAGCACGGCCCGGCGGGGCAGGGCTTCG
GAAGGGTCGAACGTTTCGGCCTCGCGGCGCCGGAGCAAGTCTCGGAGCGG
GAGGTTCGTGTCCCAGCTCAAGGGGATCGTGAAGGGCAAGGGTCCTTCTT
CTTCCTCTAGGAGAGGGTCCGCCACGCGGGAGGGCGACTCGCGCAGCGAC
GACGGCGACGACTACGAAGGCTACGACTTCGACGACGAGGATGAC
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