mRNA_P-littoralis_Contig199.30.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: D7FXL2_ECTSI (Sexually induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 3.300e-150 Identity = 199/213 (93.43%), Postives = 205/213 (96.24%), Query Frame = 1
Query: 178 MMSKLS--LFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTILS 810
M+SKLS LFFAA LVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAW+GADCSLRTCPKGAAWA EAVAAN+AHPEVECSAKGTCDR TGIC CFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGG Y+TPWDAEKQVGCKCDAGFRGPDCS+QECPSGADVMGGDGS EGRDCSGRGICDY+TGLCGCFLGFYGTMCEYQTILS
Sbjct: 1 MLSKLSALLFFAA-LVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWIGADCSLRTCPKGAAWAKEAVAANDAHPEVECSAKGTCDRATGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRGICDYTTGLCGCFLGFYGTMCEYQTILS 212
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: A0A7S2BSV2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 325 bits (833), Expect = 5.420e-109 Identity = 139/200 (69.50%), Postives = 161/200 (80.50%), Query Frame = 1
Query: 208 AFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
A V AYCPN CSGHGSCG+ND+CTCYLRPNGD AW DCSLRTCPK AAW A AAN AHP VECS KG+C+R TG C CF+NY+G+ACERT+CP DCS +GFC+TEKQLAADA Y+ PWDA K VGC CD G+RGPDCS+QECPSG DV+ GDG+++GRDCSGRGIC+Y GLC CF G++GT C++QTIL
Sbjct: 12 ASFVAMGAAYCPNGCSGHGSCGSNDKCTCYLRPNGDAAWTSHDCSLRTCPKSAAWVAVATAANEAHPSVECSNKGSCNRKTGECDCFDNYDGIACERTVCPGDCSNHGFCYTEKQLAADASKTYTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRGICNYGAGLCKCFTGYFGTKCQHQTIL 211
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: A0A7S2WLA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLA1_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.550e-106 Identity = 142/211 (67.30%), Postives = 165/211 (78.20%), Query Frame = 1
Query: 178 MMSKLSLFFA-AFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
+M++ LF A A + AYCPN CSGHGSC ND+C CY RPNGD AW DCSLRTCPK AAW A AAN AHPEVECS KG C+R TG C CFENY+G+ACERT+CPNDCSG G C+T+KQLAA+A Y+ PWDA K VGC CD G+RGPDCS++ECPSG DV+ GDG+ +GRDCSGRGICDYSTGLC CF G++GT C++QTIL
Sbjct: 23 VMARALLFVALAGFATLAAAYCPNGCSGHGSCSGNDKCVCYTRPNGDPAWTEHDCSLRTCPKAAAWVAVATAANEAHPEVECSNKGLCNRKTGECECFENYDGIACERTVCPNDCSGRGICYTQKQLAAEASMTYTEPWDAMKHVGCVCDLGYRGPDCSLEECPSGPDVLLGDGNEKGRDCSGRGICDYSTGLCKCFTGYFGTKCQHQTIL 233
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: A0A812W0K4_SYMMI (Tnc protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W0K4_SYMMI) HSP 1 Score: 308 bits (788), Expect = 3.310e-102 Identity = 139/210 (66.19%), Postives = 159/210 (75.71%), Query Frame = 1
Query: 178 MMSKLSLFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
M+ K+ F + + ++AYCPN CSGHGSCGTND+CTCY R +G+ AW DCS RTCPK AAW + ANNAHP VECS KG CDR TG C CFENYEG+ACERT+CPN CS G CFTEKQLAA+A Y +PWDAEK VGC CD G RGPDCS+ ECPSGADV+ G G+ GRDCSGRG+CDY+ G C CF G+YGT CEYQTIL
Sbjct: 1 MLFKVVTFLS--IATAAVAYCPNGCSGHGSCGTNDKCTCYARIDGEAAWTFPDCSGRTCPKSAAWIGDVAGANNAHPVVECSNKGICDRETGECQCFENYEGIACERTVCPNSCSDAGVCFTEKQLAAEASRDYDSPWDAEKHVGCICDLGRRGPDCSLVECPSGADVLKGYGNEAGRDCSGRGLCDYTDGTCSCFHGYYGTKCEYQTIL 208
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: Q9Y0F6_THAWE (Sexually induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 306 bits (784), Expect = 1.890e-101 Identity = 135/200 (67.50%), Postives = 155/200 (77.50%), Query Frame = 1
Query: 196 LFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAW-AMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCE 792
L A L+ T AYCPN+CSGHGSCG ND+CTCYLRPNGD AW G DCS+RTCPKG AW A EAV+ ++ HP +ECS KG CDR TG C CFENY+G ACERTICPNDCSG G C +K LAA G Y TPWDAEK +GCKCDAG+RGPDCS +ECPSG D++G +G +EGRDCSGRG C+Y TGLC CF G++G C
Sbjct: 5 LLVLATLLATVRAYCPNACSGHGSCGINDKCTCYLRPNGDPAWTGHDCSMRTCPKGNAWVAEEAVSLDDVHPRMECSNKGMCDRETGECVCFENYDGKACERTICPNDCSGRGICLPQKSLAALEGATYDTPWDAEKHLGCKCDAGYRGPDCSQKECPSGDDILGREGGSEGRDCSGRGKCNYVTGLCQCFTGYFGNRCH 204
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: B8CC41_THAPS (Sig3-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 305 bits (781), Expect = 4.100e-101 Identity = 134/211 (63.51%), Postives = 160/211 (75.83%), Query Frame = 1
Query: 181 MSKLSLFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAV-AANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTILS 810
M K L A LV T+ A+CPN C G+GSCG ND+CTCYLRPNGD AW DCS RTCP G+AW+ E AN+AHP ECS KGTCDR +G C CFENY+G ACERT+CPNDCSG G C T+K LA G Y TPWDAEK +GCKCD G+RGPDCS +ECPSG D++GGDG+ +GR+CSGRG C++ TGLC CF G++G C++QT+LS
Sbjct: 1 MVKALLVVLATLVATAGAHCPNGCKGNGSCGINDKCTCYLRPNGDPAWTAHDCSERTCPYGSAWSSETTNGANDAHPHAECSNKGTCDRNSGECVCFENYDGKACERTLCPNDCSGRGICLTQKALAIFQGATYETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNCNFITGLCQCFDGYFGNKCQHQTVLS 211
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: C4B7Q8_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q8_OCHDN) HSP 1 Score: 301 bits (772), Expect = 8.880e-100 Identity = 133/204 (65.20%), Postives = 155/204 (75.98%), Query Frame = 1
Query: 196 LFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
+ AFL+ + A CPN C+GHGSCG ND+CTCY R +G+ AW ADCS RTCPK +AW + AN+AHP VECS KG CDR TG C CF NY+G+ACER ICPN CS G CFT+KQLA DA Y+TPWDAEK+VGC CD G RGPDCS+ ECPSG DV+ G GS GRDCSGRG+CDYS+G+C CF G+YGT CEYQT+L
Sbjct: 5 ILLLAFLLAVAQAACPNGCNGHGSCGANDKCTCYTRIDGEPAWTYADCSGRTCPKSSAWVGDVQNANDAHPVVECSNKGVCDRKTGECKCFANYDGIACERPICPNKCSDAGVCFTQKQLAVDAARTYATPWDAEKEVGCVCDLGRRGPDCSLFECPSGPDVLKGFGSEAGRDCSGRGLCDYSSGICNCFHGYYGTKCEYQTVL 208
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: A0A7S0SS37_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.140e-98 Identity = 132/190 (69.47%), Postives = 150/190 (78.95%), Query Frame = 1
Query: 238 CPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
CPN CSGHGSCG+ND+CTCY R +GD AW ADCS RTCPK AW E N+AHP ECS KGTCDR TG C C+ NY+G+AC+RTICPN CS +G CFTE QLA++AG YSTPWDA K VGC CD G RGPDCS+ ECPSGADV+GG G+ GRDCSGRGICDYS+G+CGCF G+YG CEYQT+L
Sbjct: 22 CPNGCSGHGSCGSNDKCTCYTRIDGDPAWTYADCSGRTCPKAIAWVGEVSNTNDAHPLTECSNKGTCDRKTGQCICYPNYDGIACDRTICPNRCSESGVCFTEYQLASEAGRTYSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRGICDYSSGICGCFHGYYGHRCEYQTVL 211
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: F0Y4Z3_AURAN (EGF-like domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 298 bits (763), Expect = 4.240e-98 Identity = 129/193 (66.84%), Postives = 147/193 (76.17%), Query Frame = 1
Query: 232 AYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAA-NNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGLYSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
AYCPN CSGHGSCG++D+CTCYLRPN D AW ADCS RTCP AW VA NN H ECS G CDR +G C CF+ YEG+ACERT CPNDCS G C+T+KQLA +A Y TPWDA K VGC CD GFRGPDCS+QECPSG DV+ GDG+T+GRDCSGRG+CDY +GLC CF G+YGT C+ QT+L
Sbjct: 37 AYCPNGCSGHGSCGSDDRCTCYLRPNNDSAWQAADCSERTCPMDLAWVKYPVAGENNVHESTECSNMGICDRKSGECECFDGYEGIACERTSCPNDCSARGICYTQKQLATEAATTYDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRGLCDYDSGLCKCFSGYYGTKCQQQTVL 229
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Match: A0A835ZIV1_9STRA (Sexually induced protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV1_9STRA) HSP 1 Score: 289 bits (739), Expect = 9.970e-95 Identity = 127/210 (60.48%), Postives = 155/210 (73.81%), Query Frame = 1
Query: 187 KLSLFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWVGADCSLRTCPKGAAWAMEAVAANNAHPEVECSAKGTCDRITGICGCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGL---YSTPWDAEKQVGCKCDAGFRGPDCSMQECPSGADVMGGDGSTEGRDCSGRGICDYSTGLCGCFLGFYGTMCEYQTIL 807
KLSL AA + A+CPN C+ HG C ND C C+L+ + AW G DCS RTCP G AW E V A+ HP + CSAKG C+R TG+C C+E YEG+ACERT+CPN+CSGNGFC+T++QL D G Y+ PWDA+K VGCKCD G+RGPDCS++ECP+G D MGG G+ +GRDCSGRGICDY++GLC CF GF+GT CE QTIL
Sbjct: 2 KLSLALAAGALAQVAAHCPNFCNLHGICTANDICVCHLKNDDTPAWTGPDCSERTCPTGIAWVSEMVEASGEHPVLTCSAKGNCNRETGVCDCYEGYEGIACERTVCPNNCSGNGFCYTQQQLVDDLAGSNIEYTQPWDAQKHVGCKCDPGYRGPDCSLRECPTGPDQMGGSGAAQGRDCSGRGICDYTSGLCKCFHGFFGTKCEQQTIL 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig199.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig199.30.1 >prot_P-littoralis_Contig199.30.1 ID=prot_P-littoralis_Contig199.30.1|Name=mRNA_P-littoralis_Contig199.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp MMMMSKLSLFFAAFLVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAback to top mRNA from alignment at P-littoralis_Contig199:118718..122684+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig199.30.1 ID=mRNA_P-littoralis_Contig199.30.1|Name=mRNA_P-littoralis_Contig199.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3967bp|location=Sequence derived from alignment at P-littoralis_Contig199:118718..122684+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig199:118718..122684+ >mRNA_P-littoralis_Contig199.30.1 ID=mRNA_P-littoralis_Contig199.30.1|Name=mRNA_P-littoralis_Contig199.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig199:118718..122684+ (Pylaiella littoralis U1_48)back to top |