mRNA_P-littoralis_Contig198.57.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI) HSP 1 Score: 918 bits (2372), Expect = 5.770e-314 Identity = 580/1216 (47.70%), Postives = 691/1216 (56.83%), Query Frame = 1
Query: 133 IPGTGPGTCMVCLEDCDDILGSAWLHQPRRVSQPDTAEEEDKHKKNLHDCAVAACVACLKTYFTGIVEAGFNGACPRMRCMCCPRVVCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDRAAVQIIRRGPPAEAATADAQQRPVRARGPGQGPDGGYVTIEPVLETDVPVESDGEWGPEPVQVREGGGGYQEVVSEVVPEPVQVEEPV------RGMVPG-----GAHEQDRPNPGGA---DTGWVTETGEVDGWEGETLTRTVPAGNGPLLAEDEFRLASAYAEVYPREVAQARAAVYGEEHPNFTVQRARAQIWGTQGPALSTYSGQPRILAHGVSDAEATWQADSARAWLTHNRAAVSAVEGREAAARLSLVEAFYGDDTRLRHNTAIAHTAAEHARAALRVAAPLASTSAS----AAQQRHPSAQQRQRSEDQ--EPLFKWLGIVDLPPSAFTATGGTAESPQPGXXXXXXXXXXXXXXXXXXXXXVWVLPFADAEIDQEPRDVIPAPSALWTPWP---TGRHAPARSIPSRRSRGRREARVPDPATRRVSALEAFGTVPVRRDVERWVAGSGARQVQLRRLMAAEEDQLSRAWVALWGRQLRLDPSTKTWIDANGDGNAAVRAAARRVIFLEAHPEQACQEQGAMMKAFGRRHGTAVANAVAESTAELATAWERMHAXXXXXXXXXXXXXXXXXXXXAYAACVRHFETTAPDPASASTSDLGASXXXXXXXXXXXXXXXXXXLP----------LRQTRRLAVAWWSTNHRRICARRFADRFAGAVDAAVVANGEKEARVGEGXXXXXXXXXXXXXXXXTSNXXXXXXXXXXXXXXXVALVVAPMLLGRAPQMCDCELGDVIGGAVDWVCFNGDAFEREFEKME-----------GKIWRGGGGDGGTAGRVLEGCEC-WGGEGPSCSRFVACPVVARRYLRVSEPECTNCKEVDGFLDGDLFDLFS 3645
+PGT PG CMVCLEDCD++L SAWLH R++ +A + DC V ACV+CLKTYFTGIVEAGF+GACPRMRCMCCPRVVCE WAPLVE VLETFQKRAA LLSIQCG+CHSRGTIMVKP A HC+SSAL+KLM + L + A P + NG GD+ +ASS NA+ E FRA+L RY SG ++D S CY+A+E A + P + + Q RD+LM LLM+CVE DSERRANLHIRFIRSNPMV T CCK+LHCY CRV+GGH TCEQYEA R + +CKCPGCGVYVVKGDGCDSI+CICGH+F WS LV R+ R+ADAFRDAHPE T RAA QIIRRGPP A Q + +G D P + Q S EPV + VPG GA + +PN A + + TG+ E VP NG L AEDEFRLA+AYAE YPRE+A+ RA +YGEE+P+FTVQRA AQ +Q P L S + S+ EA W +A W T N+ V+AV R+ AAR SLVEAFY D LRH AAE+AR+ALRVA P S +A+ A R Q+Q + +Q EPLFKWLGIV+ PP T T E G W +PFADAEI+ E +V+P P L+TPWP TGR + PS SRGRR A DPA+R V A FGT+ +R +VE WVAG+ RQ LRRLMA +E +LS+AWVALW + RLDP +KTW+DA+ G+AAVRAAARRV+FLEAHPEQACQEQGAMMKAF RR+G V AV E+ AELA AWERMH H TT P S ST D + LP LR+ R+A AW S NHRR+CA+RFAD F+GA A A E+EA VALVVAPML+GRA QMC+C++G ++ AVDWV FNG+AFE E ++ME GK + G GG GR+L+GCEC SCSR VACP+V RR LRV EP C C++ G DLFDLF+
Sbjct: 53 VPGTRPGACMVCLEDCDNVLDSAWLH---RLAASSSASDVGGT-----DCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGL---APATPPSATTATAITTQGSPANIKSSTNG---GDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIGQAAQESRDELMVLLMSCVE-DSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEHVGARGDIEEQQQQGHEYPLDAPAATAAGTXXXXXXXXXXXXXXQPATSGAWGEPVXXXXXXXXXXXXQRWVPGVEQGPGAADAWQPNQRPAQELERAPLHGTGQATIEEERDEPVPVPEENGRLSAEDEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQ--SSQLPPLLALSYFHQPCPASTSETEAAWLMRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRH------IAAEYARSALRVAPPFTSVAATDRPRAFWSRLEQYLQQQANGEQNGEPLFKWLGIVEPPPP--TGDQSTWEEGDDGAVADED---------------AWEVPFADAEIEVETFEVLPPPRRLFTPWPSARTGRVDLRPTPPS--SRGRRHAL--DPASRLVLATSTFGTLNLRAEVELWVAGTNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNHDDVD-------------------ASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASAALVANSLPPTSVASATLQLRRIGRMADAWESANHRRVCAQRFADHFSGAAGAEKAAQ-EREA-----------------LPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLSPGTMAGKNVKDEGCSGGGMGRILDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 1187
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE) HSP 1 Score: 697 bits (1798), Expect = 2.360e-231 Identity = 461/1025 (44.98%), Postives = 560/1025 (54.63%), Query Frame = 1
Query: 700 MASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDRAAVQIIRRGPPAEA-----------------ATADAQQRPVRARGPGQGPDGGYVTIEPVLETDVPVESDGEWGPEPVQVREGGGGYQEVVSEVVPEPVQVEEPVRGMVPGGAHEQDRPNPGGADTGWVTETGEVDGWEGETLTRTVPAGNGPLLAEDEFRLASAYAEVYPREVAQARAAVYGEEHPNFTVQRARAQIWGTQGPALS--TYSGQPRILAHGVSDAEATWQADSARAWLTHNRAAVSAVEGREAAARLSLVEAFYGDDTRLRHNTAIAHTAAEHARAALRVAAPLASTSAS----AAQQRHPSAQQRQRSEDQ--EPLFKWLGIVDLPPSAFTATGGTAESPQPGXXXXXXXXXXXXXXXXXXXXXVWVLPFADAEIDQEPRDVIPAPSALWTPWPTGRHAPARSIPSRRSR-GRREARVPDPATRRVSALEAFGTVPVRRDVERWVAGSGARQVQLRRLMAAEEDQLSRAWVALWGRQLRLDPSTKTWIDANGDGNAAVRAAARRVIFLEAHPEQACQEQGAMMKAFGRRHGTAVANAVAESTAELATAWERMH-----AXXXXXXXXXXXXXXXXXXXXAYAACVRHFETTAPDPASASTSDLGASXXXXXXXXXXXXXXXXXXLPLRQTRRLAVAWWSTNHRRICARRFADRFAGAVDAAVVANGEKEARVGEGXXXXXXXXXXXXXXXXTSNXXXXXXXXXXXXXXXVALVVAPMLLGRAPQMCDCELGDVIGGAVDWVCFNGDAFEREFEKME-----------GKIWRGGGGDGGTAGRVLEGCECWGGEG-PSCSRFVACPVVARRYLRVSEPECTNCKEVDGFLDGDLFDLFS 3645
+ASS NA+ E FR +L RY +G ++D SPCY+A+E A + P + + Q RD+LM LL++CV DSERR NLHIRFIRSNPMV T C K+LHCY CRV+GGH TCEQYEA R + +CKCPGCGVYVVKGDGCDSI+C+CGH F WS LV R+ R+ DAFRDAHPE T RAA QIIRRGPP A +AQQ V GPG G D G E V E + R G G +E E+D P P VP NG L AEDEFRLA+AYAE Y RE+A+ RAA+YGEE+P+FTVQRARAQ Q P LS +Y QPR A S+ EA W +A WLT N+ V+ V R+ AAR SLVEAFY D LRH AAE+AR+ALRVAAP S +A+ A R QQ+Q +Q EPLFKWLGIV+ PP T T + G W PFA+AEI++E +++P P L+T WP+ R P+ S GRR A DPA+R VSA FGT+ +R +VE WVAGS RQ LRRLMA +E +LS+AWVALWG + RLDP +KTW+DA+ G+AAVRAAARRV+FLEAHPEQACQEQGAMMKAF RR+G V AV E+ AELA AWERMH AY A +H +T A A++ + L LR+ R+ AW S NHRR+CA+RFAD F+GA A EK A+ E T+ VALVVAPML+GRA QMC+C++ ++ AVDWV FNG+AFE E ++ME GK + G G GR+L+ CEC SCSR VACP+V RR LRV +P C C++ G DLFDLF+
Sbjct: 42 VASSTCNAQRMERFRDSLERYIAGYEIDPSPCYIALEAAIANPGIGQAAQESRDELMVLLLSCV-VDSERRENLHIRFIRSNPMVVTRCYKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCVCGHCFNWSELVAARHRRIVDAFRDAHPEDTGRAAAQIIRRGPPTAADLGTGPQEDINEHVGAHGDIEAQQHGVE-HGPGAGADAGQPNQEAVQELERAPRH-----------RTGQGTVEE-------------------------ERDEPVP-------------------------VPGENGRLSAEDEFRLANAYAEAYRRELARGRAAIYGEENPHFTVQRARAQ--SDQLPPLSALSYFRQPRP-AICTSETEAAWLTRAAEDWLTTNQGKVNVVRRRDEAARSSLVEAFYSGDDLLRH------IAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQNGEPLFKWLGIVEPPPP--TGDQSTWKDDDDGAVADED---------------AWEAPFANAEIEEETFEILPPPQTLFTAWPSARTERVDLRPTPPSSWGRRRAL--DPASRLVSATSTFGTLRLRAEVELWVAGSNIRQKGLRRLMAVQERELSKAWVALWGHRRRLDPVSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFIRRNGAVVLKAVEEADAELAAAWERMHDNRDDVDAAHSSTTPPASTSPAAFDRAYTAYRKHIDTRASAALVANSLPPTCAASAT--------------LQLRRIGRMVDAWESANHRRVCAQRFADHFSGAAGA------EKAAQEREALPKRPRESRAAANEDATA------------FGDVVALVVAPMLIGRASQMCECDMEAILSNAVDWVAFNGEAFEEELQRMEARLKLPPGTMAGKDGKNEGCSEGGMGRILDRCECKLERSVSSCSRLVACPIVTRRILRVPKPVCPECEDGSGVFGTDLFDLFA 943
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.950e-48 Identity = 117/344 (34.01%), Postives = 170/344 (49.42%), Query Frame = 1
Query: 151 GTCMVCLEDCDDILGSAWLHQPRRVSQPDTAEEEDKHKKNLHDCAVAACVACLKTYFTGIVEAGFNGACPRMRCMCCPRVVCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDD---LMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEAQRAP--EQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRD 1167
G C VC+E+ ++G+ +LH ++ E + +HD AC CL YFT IV G+NG CPRM+C CP VV E W+ LVEP+ F++RAA+LL++QC CH+R ++M H SA + ++AL A A +I E AA+ D A PC V E+ PE++ + LM+ ++ C++ D ERRA LH RF+ +P+V T CC A+HCYRCRV H TC +Y+A P E + CP C +Y+VK DGC S++C+CGH FC+ + +++
Sbjct: 79 GMCSVCMEE-QQVVGAEYLH----ATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLME-----FAHYSAGS---ADFERALPGALAADLHL----------------------------FEAGAISATVFVERIAAAV------DGDIAQPCAVTAEQ---DPELNHVVPETTAKVWALMREVLKCIQ-DWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQE 371
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK) HSP 1 Score: 158 bits (399), Expect = 2.680e-36 Identity = 110/370 (29.73%), Postives = 168/370 (45.41%), Query Frame = 1
Query: 157 CMVCLEDCDDILGSAWLHQPRRVSQPDTAEEEDKHKKNLHDCAVAACVACLKTYFTGIVEAGFNGACPRMRCMCCPRV-VCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSG----DDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQY-EAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDR-AAVQIIR 1245
C VCL++ L L P+ C + AC +C ++F GIV ++G +M C C + V TWA +P++L FQ+RAA+LLS+QC CH+R + ++ Q+ L + DK ++ T ++AS E ++AF AL +TSG +D C F S D+ +D+M+ ++ + D+ +RA LH+R++RS P +T CCK + C+RCR HE TC Q AQ ++ CP C + +VKGDGC S+TC+CG F W ++ VA+ FRD + + R AA+ IR
Sbjct: 69 CQVCLDEVPQSLILKELCGPK--------------------CPLVACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDLFIQDQS----------LPTDADKHMEGIETM--------------------------------LVAS-----EKRDAFSQALGLFTSGSINEEDFFQLICITLFPDQFQS---SSPDEGPWEDVMKPILLSIR-DARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQWHEGQTCSQVLAAQFQNSEVLTCPACAIQLVKGDGCSSVTCVCGKTFNWDQRKKEC---VAETFRDLYGDSAGRMAALMFIR 364
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK) HSP 1 Score: 160 bits (405), Expect = 3.270e-36 Identity = 121/392 (30.87%), Postives = 176/392 (44.90%), Query Frame = 1
Query: 172 EDC-DDILGSAWLHQPRRVSQPDTAEEEDKHKKNL--HDCAVAACVACLKTYFTGIVEAGFNGACPRMRCM-CCPRVVCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVK----PQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAAL------ARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTC-EQYEAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDRAAVQIIRRGPPAEAATADAQQRPVRA 1302
E C D+ G+ + + + + AE +K KKN+ DC + +C ACLKT+F IV+ G++G +M C C V W+P V+ LE FQ+RAA+LLS+QC CHSR + + P H K ++E + A D A + +R + ++AF L ++ + +D DA P A ++P + S+RD + RA LH+R++R +P VTT CC+A C+RCR H TC E A L C CG+ +VKGDGC S+TC+CG++F W R+ AD F++ H E R A R EAA A A + RA
Sbjct: 53 ESCLSDVSGTEEVKEMCLICYENVAE--NKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLA--------------------------------LGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAA-----ARPVLL----SVRD-------------ARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGLQLVKGDGCSSVTCVCGNHFDWDQRCREV---FADGFQERHGEDASRLAALAHHRPEGFEAADASAARHWARA 385
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.940e-29 Identity = 104/343 (30.32%), Postives = 150/343 (43.73%), Query Frame = 1
Query: 277 DCAVAACVACLKTYFTGIVEAGFNGACPRMRCMCCP-RVVCERTWAPLVEPDV--------LETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTA-APXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEAQRAP-EQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDRAAVQII--RRGPPAEA 1266
DC C +CL + V++G+ GA RM C P R+ W P V + ++ F A +LS+QCG CH+R +M +P S AL DKA+ + + AP + + K+ L S + V V E KPE + S +D LL+ +E D ER+A LH F+R P + CCK++HC+RC + G H TCE+++A R E + CPGCGV + KGDGC S++C+CG++F W V +A F + + T A QI+ RGP EA
Sbjct: 47 DCQTIMCSSCLAEHCRVTVDSGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLM-RPT-----SKAL------ADKAMQALQASHAP-----------------------------------VYDHLYKQHVEPFLVGAVSQEHV-----IVQCEAFLPKPEFALTHPSGKDTAFGLLLDSIE-DDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNWDTEVAKIREALAKLFCEDFRDRTAHHAAQILFEGRGPVPEA 336
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S1TQX8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQX8_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.080e-27 Identity = 111/419 (26.49%), Postives = 167/419 (39.86%), Query Frame = 1
Query: 148 PGTCMVCLED--CDDILGSAWLHQPR-RVSQPDTAEEEDKHKKNLHDCAVAACVACLKTYFTGIVEAGFNGACPRMRCM--CCPRVVCERTWAPLVEPD-------VLETFQKRAAMLLSIQCGLCHSRGTIMV------------KP-------QAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDD-------------------LMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEA-QRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVRDRNMRVADAFRDAHPEGTDRAAVQIIRRG 1251
P C VC C + A PR R + AEE D + C + C CL Y V+A + GAC +RC C ++ W L++ + F K A +LS+QCG CHSRGT+ V KP AG C + + ++ + + + +T AP G + + + + L +Y G +DA C+ A++R P+++ + + D+ L+ + C D ERRA L R + +P + CC HCYRC+ G H+ ++C+ + R EQ+ C CGV++VKGDGC SI C+CG NF W V FRD + R A + + RG
Sbjct: 213 PAECGVCFTSGPCWRLNCPADPSAPRDRAEETKGAEEADGDGDAVPCCGMTICRPCLGAYVQSHVDALYLGACKPLRCPDPACRAILPMPLWLALLDQKTGDERAGLRRQFIKYAKSVLSLQCGSCHSRGTLHVGDYPNAPSCFPLKPGCVHPLSMAGACSVAKSKAVVAALGREV---TTTAP---------------------------GGEAIPPKL----ASDVMEVPLMKYMRGH-LDAGACWAALKRCV--PQLACASEGLADEEYCPTVPGHADPTAQYEKELLVNAVLCRIPDPERRAALLSRVLALHPKAKSNCCAYTHCYRCKTKGFHDGVSCDANQGWDRGAEQVVTCHNCGVWIVKGDGCSSINCVCGANFNWDTRVTQMGDAQVAGFRDFFTKDPFRIAYEFVVRG 594
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 122 bits (306), Expect = 6.180e-26 Identity = 77/301 (25.58%), Postives = 123/301 (40.86%), Query Frame = 1
Query: 277 DCAVAACVACLKTYFTGIVEAGFNGACPRMRCMCC-PRVVCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQY----EAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVR 1164
DC + AC C+ +F + +G++G +M C C R V W P+ + + +RAA+LL++QC CH R TI+ V+ + +KE R+ G ++ Y + F E + ++Q + D RA L++R++R P V+T+CC+A C+RCR H+ MTCE+ EA++ + + CP C + +VKGDGC+ +TC+CGH F W L R
Sbjct: 100 DCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQ-------------------------------------------------------VLPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIR-----DEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRR 339
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK) HSP 1 Score: 117 bits (292), Expect = 1.310e-24 Identity = 75/296 (25.34%), Postives = 120/296 (40.54%), Query Frame = 1
Query: 292 ACVACLKTYFTGIVEAGFNGACPRMRCMCC-PRVVCERTWAPLVEPDVLETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAMERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQY----EAQRAPEQLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALVR 1164
AC C+ +F + +G++G +M C C R V W P+ + + +RAA+LL++QC CH R TI+ V+ + +KE R+ G ++ Y + F E + ++Q + D RA L++R++R P V+T+CC+A C+RCR H+ MTCE+ EA++ + + CP C + +VKGDGC+ +TC+CGH F W L R
Sbjct: 42 ACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQ-------------------------------------------------------VLPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIR-----DEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRR 276
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Match: A0A7S1XW06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW06_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.360e-23 Identity = 99/322 (30.75%), Postives = 139/322 (43.17%), Query Frame = 1
Query: 295 CVACLKTYFTGIVEAGFNGACPRMRCMCC-PRVVCERTWAPLV-EPDVL-ETFQKRAAMLLSIQCGLCHSRGTIMVKPQAGHCHSSALEKLMVEVDKALDSTSTAAPXXXXXXXXXXXXXXXXXSIDTGNGNGNGDDVMASSIRNAEIKEAFRAALARYTSGDDVDASPCYVAM-------ERAFSKPEVSEMDQSIRDDLMQLLMTCVEADSERRANLHIRFIRSNPMVTTVCCKALHCYRCRVIGGHETMTCEQYEAQRAPE---QLCKCPGCGVYVVKGDGCDSITCICGHNFCWSALV-------RDRNMRVADAFRD 1200
C CL YF+G+V G+CPR+ C+ R V WA +V +PD L E K A LS QCG CH+R ++ LE+ VD S+D G + V+ + AE+K A R Y G + A Y + A P S++ + + ++ + CV AD ERRA L +R +R+ P T CC+ HC+ CR H + +C +Y + +L C C + + KGDGCDS+TCICGH F WS+ V R+R A A RD
Sbjct: 69 CRGCLDHYFSGVVTGAVIGSCPRVACLYHHARTVPAHRWARVVAKPDELKERHAKAARDALSFQCGSCHARRSLY------------LEEETANVD----------------------------SLDAGLCH-----VLGGT---AEVKAAVR----EYNEGG-MTAEDLYALLAAKLPPLRAAAENPHGSDVVEPA-EVIVDAVARCV-ADPERRAALQLRHLRTVPRFRTRCCRVEHCFNCRTRAWHGSQSCAEYARKANASGRVELVTCFKCDLQLTKGDGCDSVTCICGHAFSWSSRVEEMATMRRERRAESAAALRD 335 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.57.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.57.2 >prot_P-littoralis_Contig198.57.2 ID=prot_P-littoralis_Contig198.57.2|Name=mRNA_P-littoralis_Contig198.57.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1214bp MDLRVPSPRPAINIMPSGNMVSISPAAPPLSETKIEVVKKSGIPGTGPGTback to top mRNA from alignment at P-littoralis_Contig198:290461..301131+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.57.2 ID=mRNA_P-littoralis_Contig198.57.2|Name=mRNA_P-littoralis_Contig198.57.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10671bp|location=Sequence derived from alignment at P-littoralis_Contig198:290461..301131+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:290461..301131+ >mRNA_P-littoralis_Contig198.57.2 ID=mRNA_P-littoralis_Contig198.57.2|Name=mRNA_P-littoralis_Contig198.57.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3642bp|location=Sequence derived from alignment at P-littoralis_Contig198:290461..301131+ (Pylaiella littoralis U1_48)back to top |