mRNA_P-littoralis_Contig198.49.8 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 733 bits (1891), Expect = 1.210e-249 Identity = 374/621 (60.23%), Postives = 448/621 (72.14%), Query Frame = 2
Query: 218 LKLLPVCCGFLLSSMPAPVDAVTATKAIFDYRTGEDFGTEANCVDAYNKNTRYLQIELFDYNQTPNLELTWRQVTDECGNAISDGFEESMSWSEGDITT-DRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSG----SG---YGFTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGG-----------GDDYFSLGCAADSKSARVMEVGPIAESPMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLG----------TTSDSSACTMDCAGTEGEICGGNDAITVYEI------EPIVVPT-PAPETVGGG----DGYFSLGCAADSKSARV 1960
+ L+ G L+S+PA VD V KAIFD RTG+D+ ++ NC D+ + RYLQIE FDYN +P +++TWRQ+TDECGNA++DGF E++++ I DRLQMDMYICAPWGNYEL ++SKSTNGGNAME+IAWEVEYGP EYHI+DTLNTPFF + + DYAPI SG G + FPL+G+EGYYSVMYSGPFPPLEC NLHP+G+ Y GC+ AG+FGTADGP+GS+NDADPAE YRMFDGIDDDGV+A+ VMTLEKCA+ C AQGT+YFGLESA+KCLCGDEL GS DV G+GGSVCGID TF ++PEYK+LCSGDSRVLCGTDDHISVYSLDGS G SG G +GC ADSQ DRVM GP++ +MSAEICLGIC +D +YTHFGT+YG++C+CTG LGTT S+ACT C G GE CGG DA+T+YEI PTPAP T G DY + C ADS+S+RVM VGP+AE+ MSAEIC GIC A D +YTHFGT+YG++ DL T S+AC CAG EICGG DA++VYEI P PT PAP T D Y +GC AD+++ARV
Sbjct: 1 MTLVAAASGAFLASVPA-VDGV---KAIFDLRTGDDYESDNNCADSEARKVRYLQIEGFDYNSSPWMQMTWRQLTDECGNAVTDGFSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNGGNAMEKIAWEVEYGPDEYHIWDTLNTPFFDD--SLDYAPIPSGSGEEETFTFPLEGSEGYYSVMYSGPFPPLECSNLHPSGITYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPAPASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEE-----DLSGQPRPPPTAPTXETSTACVYPCAGNPEEICGGFDALSVYEIVADIPSPPTTAPTLPAPRTPAPASIVSDDYEVIGCVADNQAARV 610
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI) HSP 1 Score: 686 bits (1771), Expect = 1.030e-231 Identity = 377/744 (50.67%), Postives = 451/744 (60.62%), Query Frame = 2
Query: 203 RGSMALKLLPVCCGFLLSSMPAPVDAVTATKAIFDYRTGEDFGTEANCVDAYNKNTRYLQIELFDYNQTPNLELTWRQVTDECGNAISDGFEESMSWSEGDIT-TDRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEE-PASDYAPIAS--GDGT--ANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSGSGYGFTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGGGDDYFSLGCAADSKSARVMEVGPIAESPMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCAGTEGEICGGNDAITVYEIEPIVVPTPAPETVGGGDGYFSLGCAADSKSARVMEVGPISETSMSAEICLGICLALDPTYTHFGTEFGNECFCTGDL---------GTTSDTSACTMDCAGT--EGEICGGSDAISVYEIDAPVTTP---DDYTSLGCYSDPQDGSRAMEVKKT-ASEMSAEICYNLCIEEDPSYEFFGTQYSVE 2371
R S A+KL+ C LL+SMPAP A K IFD RTG D+ ++ANC D+ K TRYLQIE+FDYN+TP LE+TWRQ+TDECGNAISDGFE + +GD T + Q+DMY+CAPWG+YEL ++SKSTNGGN MERIA+EVEYGP++YHI+D+LNTPFF E+ P SDYAPI + DG + + +PL+GAEGYYSVMYSGPFPPLECPNL P V YVGC+ AG+FG A+GP GS+ND DPAE YR+FDGIDD+GV A+ VMTLEKCA+IC QGT YFGLESA+KCLCGDELDGS Y DV GE SVCG+DYT DVNIPEYKFLCSG+S VLCGTD H+SVYSL+ E ++ETS D G DY +GC D + ARVM GPI MSAEIC IC L PT THFGT+YG++CFCT L ++ S+ CT +C G E CGG D IT Y I A GDGY S+GC AD R+M+ ++ MSAEIC GIC D T THFGT++G ECFC D G S S C M CAG E CGG D +S YEI P YT+LGC+ DP+DG +AM+ T A+ MSA+ICY++C+EEDP YEFFGTQ+ +E
Sbjct: 2 RASTAMKLVSAGCTALLASMPAPA---AAEKHIFDLRTGNDYESDANCEDSETKKTRYLQIEIFDYNKTPWLEITWRQLTDECGNAISDGFEGKAHYKDGDRQDTSKFQIDMYVCAPWGHYELEVVSKSTNGGNPMERIAFEVEYGPEQYHIWDSLNTPFFDEDDPPSDYAPIPTKYNDGIEEGDTFTWPLEGAEGYYSVMYSGPFPPLECPNLFPEDVAYVGCYPAGMFGEAEGPEGSANDEDPAENYRLFDGIDDEGVAADKVMTLEKCAAICTEQGTAYFGLESAVKCLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLN-------------------------EGREVSETS--------------------------------DDG------------------------------------------------DYELIGCRVDDREARVMSAGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLRESAVSTGCTYECRGNPDETCGGFDMITAYRI--------AGSEPSAGDGYVSIGCLADKNGDRIMDGRMVTSIPMSAEICYGICK--DGTNTHFGTQWGKECFCMADADFENMEKHGGELSTASHCQMGCAGFTHRDEKCGGFDEMSAYEIIPEPEVPVIDGPYTALGCFEDPRDGDKAMDALFTDATTMSADICYSICMEEDPDYEFFGTQWGIE 625
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 610 bits (1574), Expect = 2.200e-205 Identity = 292/442 (66.06%), Postives = 348/442 (78.73%), Query Frame = 2
Query: 218 LKLLPVCCGFLLSSMPAPVDAVTATKAIFDYRTGEDFGTEANCVDAYNKNTRYLQIELFDYNQTPNLELTWRQVTDECGNAISDGFEESMSWSEGDITT-DRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSG----SG---YGFTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAI 1519
+ LL G L+S+P V KAIFD RTG+D+ ++ NCVD+ + RYLQIE FDYN +P +++TWRQ+TDECGNA++DGF E++++ I DRLQMDMYICAPWGNYEL ++SKSTNGGNAME+IAWEVEYGP EYHI+DTLNTPFF + + DYAPI SG G + FPL+G+EGYYSVMYSGPFPPLEC NLHP+G+ Y GC+ AG+FGTADGP+GS+NDADPAE YRMFDGIDDDGV+A+ VMTLEKCA+ C AQGT+YFGLESA+KCLCGDEL GS DV G+GGSVCGID TF ++PEYK+LCSGDSRVLCGTDDHISVYSLDGS G SG G +GC ADSQ DRVM GP++ +MSAEICLGIC +D +YTHFGT+YG++C+CTG LGTT S+ACT C G GE CGG DA+
Sbjct: 1 MTLLAAVSGAFLASVPG----VEGVKAIFDLRTGDDYESDNNCVDSEARKVRYLQIEGFDYNSSPWMQMTWRQLTDECGNAVTDGFSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNGGNAMEKIAWEVEYGPDEYHIWDTLNTPFFDD--SLDYAPIPSGSGEEETFTFPLEGSEGYYSVMYSGPFPPLECSNLHPSGITYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE) HSP 1 Score: 579 bits (1493), Expect = 3.690e-191 Identity = 307/571 (53.77%), Postives = 375/571 (65.67%), Query Frame = 2
Query: 350 DAYNKNTRYLQIELFDYNQTPNLELTWRQVTDECGNAISDGFEESMSWSEGDIT-TDRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEE-PASDYAPIAS----GDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSL-DGSGSGSGYGFTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGGGDDYFSLGCAADSKSARVMEVGPIAESPMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDL---------GTTSDSSACTMDCAGT--EGEICGGNDAITVYEIEPIVVPTPAPETVGGGDGYFSLGCAADSKSA-RVMEVGPISETSMSAEI 2005
D+ K TRYLQIE+FDYN+TP LE+TWRQ+TDECGNAISDGFE + +GD T + Q+DMY+CAPWG+YEL ++SKSTN GN MERIA+EVEYGP++YHI+D+LNTPFF E+ P SDYAPI + G + + +PL+GAEGYYSVMYSGPFPPLECPNL+PAGV YVGC+ AG+FG A+GP GS+N DPAE YR+FDGIDD+GV A+ VMTLE CLCGDELDGS Y DV GE SVCG+DYT DVNIPEYKFLCSG+S VLCGTD H+SVYSL + G+ + + +GC D + RVM VGPI +MSAEIC IC L PT THFGT+YG++CFCT LG ++ S+ CT DC+G E CGG D IT Y I A GD Y S+GC AD R+M+ + PMSAEIC GIC D T THFGT++G +CFC D G S +S C M CAG E CGG D ++ YEI +P + G Y +LGC D + + M+ T+MSA++
Sbjct: 18 DSETKKTRYLQIEIFDYNKTPWLEITWRQLTDECGNAISDGFEGKAHYKDGDRQDTSKFQIDMYVCAPWGHYELEVVSKSTNDGNPMERIAFEVEYGPEQYHIWDSLNTPFFDEDNPPSDYAPIPTKFNDGIDEGDTFTWPLEGAEGYYSVMYSGPFPPLECPNLYPAGVAYVGCYPAGMFGEAEGPEGSANGEDPAENYRLFDGIDDEGVAADKVMTLE---------------------CLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLNEDRGANNDGDYELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRI--------AGSEPSAGDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEICYGICK--DGTNTHFGTQWGKECFCLADADFENMDKHGGELSTASHCQMGCAGFTHRDEKCGGFDEMSAYEI----IPESKVPVIDGP--YTALGCFEDPRDGDKAMDALFTDATTMSADV 549
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 511 bits (1317), Expect = 2.230e-166 Identity = 270/474 (56.96%), Postives = 316/474 (66.67%), Query Frame = 2
Query: 422 LTWRQVTDECGNAISDGFEESMSWSEGDITT-DRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSG----SG---YGFTSLGCAADSQSDR-------------------------------VMEVGPIAETSMSAEIC-----LGICLALDPTYTHFGTEYGD---------QCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGG-----------GDDYFSLGCAADSKSARVMEVGPI 1651
L RQ+TDECGNA++DGF E++++ I DRLQMDMYICAPWGNYEL ++SKSTNGGNAME+IAWEVEYGP EYHI+DTLNTPFF + + DYAPI SG G + FPL+G+EGYYSVMYSGPFPPLEC NLHP+G+ Y GC+ AG+FGTADGP+GS+NDADPAE YRMFDGIDDDGV+A+ VMTLEKCA+ C AQGT+YFGLESA+KCLCGDEL GS DV G+GGSVCGID TF ++PEYK+LCSGDSRVLCGTDDHISVYSLDGS G SG G +GC ADSQ DR VM GP++ +MSAE+ + ++L F QC+CTG LGTT S+ACT C G GE CGG DA+T+YEI PTPAP T G DY + C ADS+S RV + G I
Sbjct: 5 LKHRQLTDECGNAVTDGFSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNGGNAMEKIAWEVEYGPDEYHIWDTLNTPFFDD--SLDYAPIPSGSGEEETFTFPLEGSEGYYSVMYSGPFPPLECSNLHPSGITYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRDGYTELHVRRIATALQVNPAGSRASPFFDSQVMSEGPMSAATMSAEVGAIPFQVNFLVSLTKALLFFPLRMLPSSSPKSRLVQCWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGXXXXXXXPVVPSGDYDFVDCVADSQSPRVRQRGEI 476
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5JNN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE) HSP 1 Score: 441 bits (1135), Expect = 2.720e-138 Identity = 275/608 (45.23%), Postives = 325/608 (53.45%), Query Frame = 2
Query: 605 MERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPN-LHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIK--------------------------------CLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSGSGYG-------------FTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVV-PTPAPET--------VGGGDDYFSLGCAADSKSARVMEVGPIAESPMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCAGTEGEICGGNDAITVYEIEPIVVPTPAPET----------------VGGGDGYFSLGCAADSKSARVMEVGPISETSMSAEICLGICLALDPTYTHFGTEFGNECFCTGDLGTTSDTSACTMDCAGTEGEICGGSDAISVYEIDAPVTTPDD 2215
ME+IAWEVEY P EYHI+DTLNTPFF E + DYAPI SG G + FPL+G+EGYYSVMYSGPFPPL+C + LH A V YVGC+ AG+F TADG + SSN D AE YR FDG DDDG DA VMTLE CA+ C AQGT+Y GLESA+K CLCGDEL GS DV G GGSVCGID TF ++PEYK+LCSGDSRV CGTDDHISVYS+ GS G F GC AD QS+RVM V PIAE +MSAE F GD +G LG T S+AC DC G EIC G +A++VYEI + PT P V DD +GC AD ARVM VGP++ + M+AE G G LG T S+AC DCAG EIC G +A++VYEI + +PA + V D Y +G AD ARVM VGP+S +M+A ECFCTG LG T ++A + CAG GE+CG A++VYEI + T+P D
Sbjct: 1 MEKIAWEVEYVPDEYHIWDTLNTPFF--EDSLDYAPIPSGSGEEETFTFPLEGSEGYYSVMYSGPFPPLQCADELHLADVTYVGCYSAGIFCTADGSTRSSNSKDSAEKYRPFDGTDDDGEDANKVMTLENCAATCTAQGTQYLGLESAVKTTYVVYVGYLLVSSALSHAIDSLRRHTPPLLQCLCGDELVGSPIDDVYGIGGSVCGIDITFGGDVPEYKYLCSGDSRVRCGTDDHISVYSIGGSTGGGNEDEEEPNPAPVGSDDFELTGCVADDQSNRVMPVEPIAENAMSAEDAAHPSRDSPNISRRFAL--GDVRAWSGSLGATQSSTACDYDCAGNAEEICSGFNAMSVYEIASVTTSPTDYPTXXXXXXXXXVVPSDDSELVGCVADFNGARVMPVGPLSSNAMTAEDDDG-----------------------GSLGATQSSTACDYDCAGNADEICSGFNAMSVYEIASVTT-SPADDPTXXXXXXXXXXXXXXXVVPSDDYELIGYVADFNGARVMPVGPLSSNAMTA-----------------------ECFCTGSLGATQSSTAYSYACAGNSGELCGRLYAMTVYEIGSVATSPTD 557
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5JYR3_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR3_9PHAE) HSP 1 Score: 287 bits (735), Expect = 4.050e-85 Identity = 175/390 (44.87%), Postives = 203/390 (52.05%), Query Frame = 2
Query: 203 RGSMALKLLPVCCGFLLSSMPAPVDAVTATKAIFDYRTGEDFGTEANCVDAYNKNTRYLQIELFDYNQTPNLELTWRQVTDECGNAISDGFEESMSWSEGDITTDRLQMDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSG----SG---YGFTSLGCAADSQSDRVMEVGPIAETSMSAEI 1351
R S + LL G L+S+PA VD V KAIFD RTGED+ ++ NCVD+ + RYLQIE FDYN +P +++TW NLHP+G+ Y GC+ AG+FGTADGP+GS+NDADPAE YRMFDGIDDDGV+A+ VMTLEKCA+ C AQGTRYFGLESA+KCLCGDEL GS DV GEGGSVCGID TF ++PEYK+LCSGDSRVLCGTDDHISVYSLDGS G SG G +GC ADSQ DRVM VGPIAE +MSAE+
Sbjct: 2 RPSSTMTLLAAASGAFLASIPA-VDGV---KAIFDLRTGEDYESDNNCVDSEARKVRYLQIEGFDYNSSPWMQMTWS---------------------------------------------------------------------------------------------------------------------------------NLHPSGITYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEKCAATCTAQGTRYFGLESAVKCLCGDELAGSPTDDVYGEGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMSVGPIAEDTMSAEM 258
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI) HSP 1 Score: 264 bits (674), Expect = 2.660e-76 Identity = 135/226 (59.73%), Postives = 159/226 (70.35%), Query Frame = 2
Query: 1055 CLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDGSGSG----SG---YGFTSLGCAADSQSDRVMEVGPIAETSMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGG-----------GDDYFSLGCAADSKSARVMEVGPIAESPMSAEI 1678
CLCGD+L GS DV G+GGSVCGID TF ++PEYK+LCSGDSRVLCGTDDHISVYSLDGS G SG G +GC ADSQ DRVM GP++ +MSAEICLGIC +D +YTHFGT+YG++C+CTG LG+T S+ACTMDC G E CGG DA+T+YEI PTPAP T G DY +GC ADS+S+RVM VGP+ E MSAE+
Sbjct: 50 CLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEV 275
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: A0A6H5JIW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW9_9PHAE) HSP 1 Score: 237 bits (605), Expect = 5.310e-68 Identity = 128/237 (54.01%), Postives = 145/237 (61.18%), Query Frame = 2
Query: 527 MDMYICAPWGNYELTIISKSTNGGNAMERIAWEVEYGPKEYHIYDTLNTPFFSEEPASDYAPIASGDGTANVYKFPLDGAEGYYSVMYSGPFPPLECPNLHPAGVDYVGCFDAGLFGTADGPSGSSNDADPAEPYRMFDGIDDDGVDAEGVMTLEKCASICGAQGTRYFGLESAIKCLCGDELDGSLYPDVDGEGGSVCGIDYTFDVNIPEYKFLCSGDSRVLCGTDDHISVYSLDG 1237
MDMYICAPWGNYEL ++ KST GGNAME+IAWEVEYGP E G YSVMYSGPFPPLEC NLHP+G+ Y + G+FGTADGP+GS+N AE Y MFDGIDDDGV+A+ V TLEKCA+ C A+GT+YFG E A+K Y G ID TF + P+YK LCSGDSRVLCGTDDHISVYSLDG
Sbjct: 1 MDMYICAPWGNYELELVFKSTKGGNAMEKIAWEVEYGPDE-----------------------------------------GNYSVMYSGPFPPLECSNLHPSGITYERWYSVGIFGTADGPTGSANYH--AENYHMFDGIDDDGVNADKVTTLEKCAATCTARGTQYFGREFAVK----------PYRQRLRRRGLRVRIDITFGGDAPDYKCLCSGDSRVLCGTDDHISVYSLDG 184
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Match: D7FL81_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.670e-54 Identity = 105/201 (52.24%), Postives = 128/201 (63.68%), Query Frame = 2
Query: 1469 MDCVGTEGEICGGNDAITVYEIEPIVVPTPAPETVGG-----------GDDYFSLGCAADSKSARVMEVGPIAESPMSAEICLGICLALDPTYTHFGTEYGDQCFCTGDLGTTSDSSACTMDCAGTEGEICGGNDAITVYEI--EPIVVPTPAPETVGG---------GDGYFSLGCAADSKSARVMEVGPISETSMSAEI 2005
MDC G E CGG DA+T+YEI PTPAP T G DY +GC ADS+S+RVM VGP+AE MSAEIC GIC A D + THFGT+YG++C+CTG LGTT SSACTMDCAG E CGG DA+++YEI + PTPAP D Y +GC AD+++ARVM VGP++E +MSAE+
Sbjct: 1 MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEV 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.49.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.49.8 >prot_P-littoralis_Contig198.49.8 ID=prot_P-littoralis_Contig198.49.8|Name=mRNA_P-littoralis_Contig198.49.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=761bp MALKLLPVCCGFLLSSMPAPVDAVTATKAIFDYRTGEDFGTEANCVDAYNback to top mRNA from alignment at P-littoralis_Contig198:209650..247613- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.49.8 ID=mRNA_P-littoralis_Contig198.49.8|Name=mRNA_P-littoralis_Contig198.49.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=37964bp|location=Sequence derived from alignment at P-littoralis_Contig198:209650..247613- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:209650..247613- >mRNA_P-littoralis_Contig198.49.8 ID=mRNA_P-littoralis_Contig198.49.8|Name=mRNA_P-littoralis_Contig198.49.8|organism=Pylaiella littoralis U1_48|type=CDS|length=2283bp|location=Sequence derived from alignment at P-littoralis_Contig198:209650..247613- (Pylaiella littoralis U1_48)back to top |